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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA localization
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Accession:GO:0006403 term browser browse the term
Definition:A process in which RNA is transported to, or maintained in, a specific location.
Synonyms:exact_synonym: RNA localisation;   establishment and maintenance of RNA localization


show annotations for term's descendants           Sort by:
RNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:14614102 RGD:1299544 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,197,058...25,243,272 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20797886) MGI
Ensembl		 PMID:20797886 GO_REF:0000107 NCBI chr17:62,815,509...62,857,795
Ensembl chr17:62,815,085...62,858,382 		JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21729784) Ensembl
MGI		 PMID:21729784 GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697 		JBrowse link
dsRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,162...23,265,106 		JBrowse link
G RFTN1 raftlin, lipid raft linker 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21266579) MGI
Ensembl		 PMID:21266579 GO_REF:0000107 NCBI chr13:3,454,448...3,675,072
Ensembl chr13:3,454,454...3,674,998 		JBrowse link
G RFTN2 raftlin family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21266579) Ensembl
MGI		 PMID:21266579 GO_REF:0000107 NCBI chr15:101,433,839...101,500,926
Ensembl chr15:101,433,845...101,500,880 		JBrowse link
establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,175,515...83,289,986
Ensembl chr13:83,174,824...83,289,989 		JBrowse link
intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPRIN1 cell cycle associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20861386) Ensembl
MGI		 PMID:20861386 GO_REF:0000107 NCBI chr 2:26,830,987...26,875,425
Ensembl chr 2:26,830,267...26,875,357 		JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12843282) Ensembl
MGI		 PMID:12843282 GO_REF:0000107 NCBI chr12:22,199,227...22,221,573
Ensembl chr12:22,199,228...22,221,499 		JBrowse link
G FUBP3 far upstream element binding protein 3 ISO RGD PMID:23121659 RGD:12792285 NCBI chr 1:270,649,796...270,702,920
Ensembl chr 1:270,652,450...270,702,918 		JBrowse link
G KIF5C kinesin family member 5C ISO RGD PMID:23121659 RGD:12792285 NCBI chr15:3,190,341...3,361,470
Ensembl chr15:3,190,343...3,361,410 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 acts_upstream_of_or_within ISO (PMID:12843282) MGI PMID:12843282 NCBI chr17:50,804,959...50,903,155
Ensembl chr17:50,804,962...50,869,223 		JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:62,139,456...62,455,509
Ensembl chr 4:62,139,464...62,455,499 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16286649) Ensembl
MGI		 PMID:16286649 GO_REF:0000107 NCBI chr 5:19,560,317...19,583,254
Ensembl chr 5:19,560,318...19,583,221 		JBrowse link
miRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:24356509) UniProt PMID:24356509 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,856 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:27559612) UniProt PMID:27559612 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604 		JBrowse link
mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:60,507,662...60,530,239
Ensembl chr12:60,507,667...60,529,733 		JBrowse link
G ALYREF Aly/REF export factor involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:1,099,239...1,103,058
Ensembl chr12:1,092,329...1,103,054 		JBrowse link
G CHTOP chromatin target of PRMT1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:95,996,030...96,006,511
Ensembl chr 4:95,994,263...96,005,585 		JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,029,450...53,044,088
Ensembl chr 9:53,029,790...53,044,383 		JBrowse link
G DDX39A DExD-box helicase 39A involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:64,836,040...64,844,996
Ensembl chr 2:64,840,347...64,844,970 		JBrowse link
G DDX39B DExD-box helicase 39B involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:23,658,089...23,669,095
Ensembl chr 7:23,658,088...23,670,031 		JBrowse link
G EIF4E eukaryotic translation initiation factor 4E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:121,409,633...121,464,467
Ensembl chr 8:121,409,731...121,464,471 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 4:28,193,631...28,203,549
Ensembl chr 4:28,191,162...28,203,485 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,367...120,399,831 		JBrowse link
G FYTTD1 forty-two-three domain containing 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr13:134,363,646...134,402,632
Ensembl chr13:134,363,682...134,402,630 		JBrowse link
G HHEX hematopoietically expressed homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,219 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO PMID:9578590
PMID:10567417
(PMID:10567417)		 UniProt PMID:9578590 PMID:10567417 RGD:9685424 RGD:9685477 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,856 		JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G LOC102164431 nuclear RNA export factor 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:83,980,605...83,989,335 JBrowse link
G LOC110257686 nuclear RNA export factor 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:84,065,215...84,073,826 JBrowse link
G LOC110257687 nuclear RNA export factor 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:84,109,452...84,117,997 JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IBA GO_Central GO_REF:0000033
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:239,492,573...239,543,925
Ensembl chr 1:239,492,721...239,535,825 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,396,097...239,467,758 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,177,209...133,192,935
Ensembl chr13:133,178,166...133,192,923 		JBrowse link
G NCBP3 nuclear cap binding subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,882,076...49,918,759
Ensembl chr12:49,882,087...49,918,744 		JBrowse link
G NUP107 nucleoporin 107 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:32,989,661...33,040,565
Ensembl chr 5:32,989,794...33,042,575 		JBrowse link
G NUP133 nucleoporin 133 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,353,420...60,404,952
Ensembl chr14:60,353,474...60,408,828 		JBrowse link
G NUP155 nucleoporin 155 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19070573) Ensembl
MGI		 PMID:19070573 GO_REF:0000107 NCBI chr16:22,520,443...22,590,119
Ensembl chr16:22,516,990...22,589,838 		JBrowse link
G NUP160 nucleoporin 160 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:14,840,056...14,891,567
Ensembl chr 2:14,840,410...14,891,677 		JBrowse link
G NUP214 nucleoporin 214 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8896451) Ensembl
MGI		 PMID:8896451 GO_REF:0000107 NCBI chr 1:271,103,838...271,210,292
Ensembl chr 1:271,104,033...271,210,288 		JBrowse link
G NUP85 nucleoporin 85 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:6,072,731...6,103,972
Ensembl chr12:6,071,812...6,103,979 		JBrowse link
G NUP88 nucleoporin 88 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:51,562,455...51,603,095
Ensembl chr12:51,562,440...51,601,968 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,969,581...8,981,984 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,338,379...30,341,629
Ensembl chr17:30,338,391...30,341,628 		JBrowse link
G RBM15B RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:33,664,387...33,671,047
Ensembl chr13:33,664,472...33,667,153 		JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,203,048...21,262,437
Ensembl chr 5:21,199,422...21,261,876 		JBrowse link
G SEM1 SEM1, 26S proteasome complex subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr13:144,628,949...144,629,377 JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:32,289,464...32,298,652
Ensembl chr 7:32,289,480...32,298,580 		JBrowse link
G THOC1 THO complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,039,262...106,088,125
Ensembl chr 6:106,040,042...106,088,021 		JBrowse link
G THOC2 THO complex subunit 2 involved_in IEA
IBA		 InterPro
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:101,170,969...101,284,623
Ensembl chr  X:101,171,362...101,284,551 		JBrowse link
G THOC3 THO complex subunit 3 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:81,658,736...81,670,996
Ensembl chr 2:81,658,788...81,670,127 		JBrowse link
G THOC5 THO complex subunit 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:46,578,973...46,624,237
Ensembl chr14:46,579,838...46,623,501 		JBrowse link
G THOC6 THO complex subunit 6 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:39,161,442...39,164,631
Ensembl chr 3:39,161,434...39,164,707 		JBrowse link
G THOC7 THO complex subunit 7 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,335,160...45,356,233
Ensembl chr13:45,334,029...45,356,060 		JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398 		JBrowse link
G XPO1 exportin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:80,255,016...80,300,260
Ensembl chr 3:80,255,146...80,300,327 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:66,086,528...66,122,717
Ensembl chr 8:66,086,523...66,122,710 		JBrowse link
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398 		JBrowse link
mRNA localization resulting in post-transcriptional regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1CF APOBEC1 complementation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20541607) Ensembl
MGI		 PMID:20541607 GO_REF:0000107 NCBI chr14:98,908,585...98,990,362
Ensembl chr14:98,908,630...98,987,524 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr 2:15,680,723...15,790,580
Ensembl chr 2:15,680,787...15,790,569 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16286649) Ensembl
MGI
GO_Central		 PMID:16286649 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:19,560,317...19,583,254
Ensembl chr 5:19,560,318...19,583,221 		JBrowse link
mRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARC activity regulated cytoskeleton associated protein involved_in ISO PMID:29328916 UniProt PMID:29328916 RGD:13514080 NCBI chr 4:1,517,986...1,521,403
Ensembl chr 4:1,518,180...1,519,370 		JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr12:22,199,227...22,221,573
Ensembl chr12:22,199,228...22,221,499 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:12629046 RGD:9685156 NCBI chr 7:52,329,054...52,382,408
Ensembl chr 7:52,304,472...52,383,732 		JBrowse link
G DDX39B DExD-box helicase 39B involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,658,089...23,669,095
Ensembl chr 7:23,658,088...23,670,031 		JBrowse link
G DUSP19 dual specificity phosphatase 19 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:88,549,250...88,574,978
Ensembl chr15:88,549,275...88,571,883 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:2,285,679...2,311,750
Ensembl chr12:2,285,579...2,313,874 		JBrowse link
G EIF4E eukaryotic translation initiation factor 4E involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:121,409,633...121,464,467
Ensembl chr 8:121,409,731...121,464,471 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:28,193,631...28,203,549
Ensembl chr 4:28,191,162...28,203,485 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,367...120,399,831 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:118,839,314...118,899,804
Ensembl chr13:118,839,338...118,900,136 		JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:52,885,932...52,903,257
Ensembl chr12:52,882,870...52,903,450 		JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:268,894,281...268,922,752
Ensembl chr 1:268,894,276...268,922,742 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,856 		JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:11886857 RGD:625404 NCBI chr15:82,958,329...82,968,740
Ensembl chr15:82,958,362...82,968,736 		JBrowse link
G HTT huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024 		JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,197,058...25,243,272 		JBrowse link
G IGF2BP2 insulin like growth factor 2 mRNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:123,485,619...123,650,050
Ensembl chr13:123,485,628...123,650,039 		JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:92,104,786...92,272,264
Ensembl chr 9:92,104,848...92,272,211 		JBrowse link
G KIF5C kinesin family member 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:3,190,341...3,361,470
Ensembl chr15:3,190,343...3,361,410 		JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G LOC100515533 oocyte-specific histone RNA stem-loop-binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:140,324,554...140,330,245 JBrowse link
G LOC102164431 nuclear RNA export factor 3-like involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:83,980,605...83,989,335 JBrowse link
G LOC110257686 nuclear RNA export factor 3-like involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:84,065,215...84,073,826 JBrowse link
G LOC110257687 nuclear RNA export factor 3-like involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:84,109,452...84,117,997 JBrowse link
G MAPT microtubule associated protein tau ISO RGD PMID:25847153 RGD:11061097 NCBI chr12:17,098,259...17,211,483
Ensembl chr12:17,095,587...17,211,373 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:239,492,573...239,543,925
Ensembl chr 1:239,492,721...239,535,825 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,396,097...239,467,758 		JBrowse link
G NDC1 NDC1 transmembrane nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:158,458,597...158,515,057
Ensembl chr 6:158,458,840...158,514,785 		JBrowse link
G NUP107 nucleoporin 107 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:32,989,661...33,040,565
Ensembl chr 5:32,989,794...33,042,575 		JBrowse link
G NUP188 nucleoporin 188 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:269,259,496...269,312,872
Ensembl chr 1:269,259,519...269,312,862 		JBrowse link
G NUP35 nucleoporin 35 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:88,587,753...88,616,310
Ensembl chr15:88,587,785...88,622,022 		JBrowse link
G NUP50 nucleoporin 50 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:4,194,308...4,219,410
Ensembl chr 5:4,197,544...4,219,230 		JBrowse link
G NUP58 nucleoporin 58 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:3,225,185...3,266,163
Ensembl chr11:3,225,268...3,259,427 		JBrowse link
G NUP85 nucleoporin 85 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:6,072,731...6,103,972
Ensembl chr12:6,071,812...6,103,979 		JBrowse link
G NUP88 nucleoporin 88 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:51,562,455...51,603,095
Ensembl chr12:51,562,440...51,601,968 		JBrowse link
G NUP93 nucleoporin 93 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:18,711,869...18,827,705
Ensembl chr 6:18,711,911...18,827,887 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:6,319,616...6,419,652
Ensembl chr 9:6,319,650...6,419,660 		JBrowse link
G NUTF2 nuclear transport factor 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:28,469,274...28,489,007
Ensembl chr 6:28,469,505...28,489,005 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,969,581...8,981,984 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr17:30,338,379...30,341,629
Ensembl chr17:30,338,391...30,341,628 		JBrowse link
G NXT2 nuclear transport factor 2 like export factor 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr  X:89,684,733...89,691,808
Ensembl chr  X:89,684,671...89,691,805 		JBrowse link
G PEG10 paternally expressed 10 involved_in ISO (MGI:6828898|PMID:34413232) UniProt PMID:34413232 MGI:6828898 NCBI chr 9:74,474,121...74,486,983
Ensembl chr 9:74,474,107...74,486,979 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392 		JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:99,408,422...99,411,964
Ensembl chr 4:99,408,466...99,413,492 		JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr13:66,483,620...66,524,411
Ensembl chr13:66,480,169...66,524,384 		JBrowse link
G TMEM129 transmembrane protein 129, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:802,940...818,161
Ensembl chr 8:802,940...818,216 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554 		JBrowse link
negative regulation of establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:62,797,244...62,831,459
Ensembl chr 4:62,797,000...62,831,454 		JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUP153 nucleoporin 153 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,393,542...13,466,577
Ensembl chr 7:13,393,547...13,466,504 		JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398 		JBrowse link
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5H12orf50 chromosome 5 C12orf50 homolog involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:94,489,714...94,520,179
Ensembl chr 5:94,492,267...94,521,046 		JBrowse link
G DDX19A DEAD-box helicase 19A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:13,368,638...13,391,344
Ensembl chr 6:13,368,661...13,393,340 		JBrowse link
G DDX19B DEAD-box helicase 19B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:13,328,241...13,358,139
Ensembl chr 6:13,325,351...13,359,459 		JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:53,029,450...53,044,088
Ensembl chr 9:53,029,790...53,044,383 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:28,193,631...28,203,549
Ensembl chr 4:28,191,162...28,203,485 		JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:268,894,281...268,922,752
Ensembl chr 1:268,894,276...268,922,742 		JBrowse link
G HHEX hematopoietically expressed homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,219 		JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:59,822,789...59,875,867
Ensembl chr15:59,822,822...59,879,422 		JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:15820316) GO_Central
MGI		 PMID:15820316 GO_REF:0000033 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G LOC102164431 nuclear RNA export factor 3-like involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:15820316) GO_Central
MGI		 PMID:15820316 GO_REF:0000033 NCBI chr  X:83,980,605...83,989,335 JBrowse link
G LOC110257686 nuclear RNA export factor 3-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:84,065,215...84,073,826 JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107
G NUP133 nucleoporin 133 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:60,353,420...60,404,952
Ensembl chr14:60,353,474...60,408,828 		JBrowse link
G NUP93 nucleoporin 93 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:18,711,869...18,827,705
Ensembl chr 6:18,711,911...18,827,887 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15820316) Ensembl
MGI
GO_Central		 PMID:15820316 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,969,581...8,981,984 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:30,338,379...30,341,629
Ensembl chr17:30,338,391...30,341,628 		JBrowse link
G NXT2 nuclear transport factor 2 like export factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:89,684,733...89,691,808
Ensembl chr  X:89,684,671...89,691,805 		JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,752,571...75,756,522
Ensembl chr 7:75,751,760...75,756,700 		JBrowse link
G PCID2 PCI domain containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:78,541,278...78,556,784
Ensembl chr11:78,541,318...78,556,733 		JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:6,174,442...6,201,941
Ensembl chr 5:6,169,401...6,201,938 		JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:21,203,048...21,262,437
Ensembl chr 5:21,199,422...21,261,876 		JBrowse link
G THOC2 THO complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:101,170,969...101,284,623
Ensembl chr  X:101,171,362...101,284,551 		JBrowse link
G ZC3H11A zinc finger CCCH-type containing 11A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:64,518,895...64,554,871 JBrowse link
positive regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,794...94,350,308 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554 		JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPSF6 cleavage and polyadenylation specific factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,525,668...33,559,941
Ensembl chr 5:33,525,689...33,555,226 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349 		JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,530,364...88,572,467
Ensembl chr 6:88,530,385...88,572,463 		JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,510 		JBrowse link
positive regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,858,514...33,873,596
Ensembl chr 5:33,858,572...33,873,523 		JBrowse link
G CCT3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:93,733,967...93,753,340
Ensembl chr 4:93,733,918...93,753,340 		JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:79,924,338...79,941,926
Ensembl chr 3:79,924,507...79,946,207 		JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr16:72,211,452...72,223,202
Ensembl chr16:72,208,012...72,223,114 		JBrowse link
G CCT6A chaperonin containing TCP1 subunit 6A involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:16,843,801...16,858,819
Ensembl chr 3:16,843,804...16,858,819 		JBrowse link
G CCT7 chaperonin containing TCP1 subunit 7 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:69,527,238...69,540,489
Ensembl chr 3:69,526,534...69,546,548 		JBrowse link
G CCT8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr13:192,407,831...192,423,466
Ensembl chr13:192,406,281...192,423,413 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,218,928...125,228,881
Ensembl chr  X:125,218,923...125,229,525 		JBrowse link
G TCP1 t-complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,590,140...7,600,709
Ensembl chr 1:7,590,140...7,601,795 		JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPO5 exportin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,530,704...38,569,558
Ensembl chr 7:38,531,919...38,569,582 		JBrowse link
regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chr 2:80,186,998...80,194,155 JBrowse link
G HTT huntingtin ISO RGD PMID:20185826 RGD:10403027 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024 		JBrowse link
G PUM2 pumilio RNA binding family member 2 ISO RGD PMID:31606248 RGD:242905203 NCBI chr 3:117,857,930...117,965,564
Ensembl chr 3:117,883,673...117,965,293 		JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8L A-kinase anchoring protein 8 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,184,735...62,241,631
Ensembl chr 2:62,184,763...62,221,935 		JBrowse link
G ALKBH5 alkB homolog 5, RNA demethylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23177736) UniProt
Ensembl		 PMID:23177736 GO_REF:0000107 NCBI chr12:60,507,662...60,530,239
Ensembl chr12:60,507,667...60,529,733 		JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,822,789...59,875,867
Ensembl chr15:59,822,822...59,879,422 		JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:75,335,565...75,414,659
Ensembl chr16:75,335,047...75,367,180 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,884,708...29,996,285
Ensembl chr13:29,884,719...29,996,359 		JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,916,716...44,940,732
Ensembl chr12:44,917,633...44,940,273 		JBrowse link
G THOC2 THO complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24315442) Ensembl
MGI		 PMID:24315442 GO_REF:0000107 NCBI chr  X:101,170,969...101,284,623
Ensembl chr  X:101,171,362...101,284,551 		JBrowse link
G TPR translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398 		JBrowse link
G WNK1 WNK lysine deficient protein kinase 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:68,000,792...68,142,533
Ensembl chr 5:68,000,905...68,140,755 		JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12496368) Ensembl
MGI		 PMID:12496368 GO_REF:0000107 NCBI chr 6:88,530,364...88,572,467
Ensembl chr 6:88,530,385...88,572,463 		JBrowse link
regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,218,928...125,228,881
Ensembl chr  X:125,218,923...125,229,525 		JBrowse link
G EXOSC10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,999...71,282,433 		JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,504 		JBrowse link
RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor involved_in ISO (PMID:28418038) UniProt PMID:28418038 NCBI chr12:1,099,239...1,103,058
Ensembl chr12:1,092,329...1,103,054 		JBrowse link
G LOC100153087 nuclear RNA export factor 2 acts_upstream_of_or_within ISO (PMID:16027110) MGI PMID:16027110 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G NPAP1 nuclear pore associated protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:233,074,862...233,080,760 JBrowse link
G NUP155 nucleoporin 155 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:22,520,443...22,590,119
Ensembl chr16:22,516,990...22,589,838 		JBrowse link
G NUP188 nucleoporin 188 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:269,259,496...269,312,872
Ensembl chr 1:269,259,519...269,312,862 		JBrowse link
G NUP214 nucleoporin 214 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:271,103,838...271,210,292
Ensembl chr 1:271,104,033...271,210,288 		JBrowse link
G NUP62 nucleoporin 62 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:54,921,627...54,945,705
Ensembl chr 6:54,921,627...54,923,227 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:6,319,616...6,419,652
Ensembl chr 9:6,319,650...6,419,660 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11579093) Ensembl
MGI		 PMID:11579093 GO_REF:0000107 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,969,581...8,981,984 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11579093) Ensembl
MGI		 PMID:11579093 GO_REF:0000107 NCBI chr17:30,338,379...30,341,629
Ensembl chr17:30,338,391...30,341,628 		JBrowse link
G POM121C POM121 transmembrane nucleoporin C involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:10,609,075...10,633,374 JBrowse link
G RAE1 ribonucleic acid export 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:57,751,858...57,768,594
Ensembl chr17:57,751,852...57,768,591 		JBrowse link
G RBM33 RNA binding motif protein 33 involved_in ISO (PMID:35589130) UniProt PMID:35589130 NCBI chr18:2,564,990...2,676,204 JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398 		JBrowse link
G XPO5 exportin 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:38,530,704...38,569,558
Ensembl chr 7:38,531,919...38,569,582 		JBrowse link
RNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690 		JBrowse link
RNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNB1 karyopherin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:23,915,783...23,945,407
Ensembl chr12:23,916,164...23,944,588 		JBrowse link
G SNUPN snurportin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:58,038,917...58,065,972
Ensembl chr 7:58,038,995...58,071,243 		JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398 		JBrowse link
RNA localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030 		JBrowse link
RNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:17004321) RGD
HGNC-UCL		 PMID:14523087 PMID:17004321 RGD:9685480 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,856 		JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in ISO (PMID:11566096) UniProt PMID:11566096 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G SIDT1 SID1 transmembrane family member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:146,300,172...146,396,552
Ensembl chr13:146,300,175...146,396,542 		JBrowse link
G SIDT2 SID1 transmembrane family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,543,648...44,559,717
Ensembl chr 9:44,543,701...44,559,715 		JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604 		JBrowse link
rRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRPL18 mitochondrial ribosomal protein L18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,581,763...7,590,037
Ensembl chr 1:7,581,764...7,590,031 		JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690 		JBrowse link
G TST thiosulfate sulfurtransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,749,264...10,759,623
Ensembl chr 5:10,746,890...10,759,622 		JBrowse link
rRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TST thiosulfate sulfurtransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,749,264...10,759,623
Ensembl chr 5:10,746,890...10,759,622 		JBrowse link
scaRNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr 5:33,858,514...33,873,596
Ensembl chr 5:33,858,572...33,873,523 		JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr 3:79,924,338...79,941,926
Ensembl chr 3:79,924,507...79,946,207 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr  X:125,218,928...125,228,881
Ensembl chr  X:125,218,923...125,229,525 		JBrowse link
G TCP1 t-complex 1 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr 1:7,590,140...7,600,709
Ensembl chr 1:7,590,140...7,601,795 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,954,674...52,968,371
Ensembl chr12:52,954,669...52,968,364 		JBrowse link
snoRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBL fibrillarin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,314,782...48,326,433
Ensembl chr 6:48,314,783...48,326,436 		JBrowse link
G NOP58 NOP58 ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,893,589...105,930,458
Ensembl chr15:105,893,637...105,930,459 		JBrowse link
G PIH1D1 PIH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,524,172...54,529,700
Ensembl chr 6:54,524,172...54,535,249 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 NOT|involved_in ISO (PMID:17636026) UniProt PMID:17636026 NCBI chr 6:55,995,087...56,011,507
Ensembl chr 6:55,995,091...56,011,441 		JBrowse link
G ZNHIT3 zinc finger HIT-type containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:38,013,931...38,027,928
Ensembl chr12:38,013,963...38,022,927 		JBrowse link
G ZNHIT6 zinc finger HIT-type containing 6 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:130,298,109...130,409,569
Ensembl chr 4:130,298,280...130,386,955 		JBrowse link
snRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:239,492,573...239,543,925
Ensembl chr 1:239,492,721...239,535,825 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,396,097...239,467,758 		JBrowse link
G NCBP3 nuclear cap binding subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,882,076...49,918,759
Ensembl chr12:49,882,087...49,918,744 		JBrowse link
G PHAX phosphorylated adaptor for RNA export involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10786834) InterPro
MGI
GO_Central
Ensembl		 PMID:10786834 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:129,713,643...129,724,524
Ensembl chr 2:129,713,643...129,724,535 		JBrowse link
snRNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAN RAN, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:24,312,810...24,318,024
Ensembl chr14:24,311,577...24,317,789 		JBrowse link
G SNUPN snurportin 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 7:58,038,917...58,065,972
Ensembl chr 7:58,038,995...58,071,243 		JBrowse link
telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAF1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 8:51,972,288...52,012,818
Ensembl chr 8:51,968,483...52,012,927 		JBrowse link
G NHP2 NHP2 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:80,223,439...80,227,614 JBrowse link
G NOP10 NOP10 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 7:80,161,024...80,162,299
Ensembl chr 7:80,161,096...80,164,328 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr13:72,196,219...72,246,514
Ensembl chr13:72,200,511...72,248,582 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893 		JBrowse link
G SHQ1 SHQ1, H/ACA ribonucleoprotein assembly factor acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr13:54,073,012...54,180,759
Ensembl chr13:54,071,659...54,180,750 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,954,674...52,968,371
Ensembl chr12:52,954,669...52,968,364 		JBrowse link
tRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOL6 nucleolar protein 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:33,022,035...33,035,201
Ensembl chr10:33,022,035...33,035,200 		JBrowse link
G SSB small RNA binding exonuclease protection factor La involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:76,088,587...76,099,517
Ensembl chr15:76,088,641...76,100,785 		JBrowse link
G XPOT exportin for tRNA involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:28,678,971...28,875,336
Ensembl chr 5:28,828,566...28,875,325 		JBrowse link
tRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOMM20 translocase of outer mitochondrial membrane 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:56,113,087...56,127,686
Ensembl chr14:56,113,192...56,127,677 		JBrowse link
G TOMM20L translocase of outer mitochondrial membrane 20 like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:187,474,745...187,496,040
Ensembl chr 1:187,475,006...187,486,729 		JBrowse link
tRNA re-export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPOT exportin for tRNA involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 5:28,678,971...28,875,336
Ensembl chr 5:28,828,566...28,875,325 		JBrowse link
tRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17633
    localization 5331
      macromolecule localization 2992
        RNA localization 159
          RNA localization to chromatin 1
          RNA localization to nucleus + 19
          establishment of RNA localization + 121
          intracellular mRNA localization + 16
          maintenance of RNA location + 0
          mitochondrial RNA localization + 0
          pole plasm RNA localization + 0
          snoRNA localization 6
          telomerase RNA localization + 19
paths to the root