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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA localization
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Accession:GO:0006403 term browser browse the term
Definition:A process in which RNA is transported to, or maintained in, a specific location.
Synonyms:exact_synonym: RNA localisation;   establishment and maintenance of RNA localization


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RNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:14614102 RGD:1299544 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,196,969...25,243,272
JBrowse link
G PRPF6 pre-mRNA processing factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20797886) MGI
Ensembl
PMID:20797886 GO_REF:0000107 NCBI chr17:62,815,509...62,857,795
Ensembl chr17:62,815,284...62,861,865
JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5051946|PMID:21729784) Ensembl
MGI
PMID:21729784 GO_REF:0000107 MGI:5051946 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,131,917...121,170,697
JBrowse link
dsRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,160...23,265,106
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21266579) MGI
Ensembl
PMID:21266579 GO_REF:0000107 NCBI chr13:3,454,448...3,675,072
Ensembl chr13:3,454,448...3,675,021
JBrowse link
G RFTN2 raftlin family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947923|PMID:21266579) Ensembl
MGI
PMID:21266579 GO_REF:0000107 MGI:4947923 NCBI chr15:101,433,839...101,500,926
Ensembl chr15:101,433,845...101,500,912
JBrowse link
establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,554
JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,175,515...83,289,986
Ensembl chr13:83,174,824...83,289,923
JBrowse link
intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASC3 CASC3 exon junction complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683131|PMID:12843282) Ensembl
MGI
PMID:12843282 GO_REF:0000107 MGI:2683131 NCBI chr12:22,199,227...22,221,573
Ensembl chr12:22,199,233...22,222,270
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:2683131|PMID:12843282) MGI PMID:12843282 MGI:2683131 NCBI chr17:50,804,959...50,903,155
Ensembl chr17:50,804,962...50,869,225
JBrowse link
G ZNF385A zinc finger protein 385A acts_upstream_of_or_within ISO (MGI:3610775|PMID:16286649) MGI PMID:16286649 MGI:3610775 NCBI chr 5:19,560,317...19,583,254
Ensembl chr 5:19,560,317...19,583,221
JBrowse link
miRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:24356509) UniProt PMID:24356509 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,858
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,491...16,878,165
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:60,507,662...60,530,239
Ensembl chr12:60,507,662...60,529,534
JBrowse link
G ALYREF Aly/REF export factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:1,099,239...1,103,058
Ensembl chr12:1,091,976...1,103,054
JBrowse link
G CHTOP chromatin target of PRMT1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:95,996,030...96,006,511
Ensembl chr 4:95,994,263...96,005,584
JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,029,450...53,044,088
Ensembl chr 9:53,029,790...53,044,387
JBrowse link
G DDX39A DExD-box helicase 39A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,836,040...64,844,996
Ensembl chr 2:64,836,062...64,844,994
JBrowse link
G DDX39B DExD-box helicase 39B involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 7:23,658,089...23,669,095
Ensembl chr 7:23,658,086...23,673,083
JBrowse link
G FYTTD1 forty-two-three domain containing 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:134,363,646...134,402,632
Ensembl chr13:134,363,682...134,438,321
JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:268,894,281...268,922,752
Ensembl chr 1:268,894,276...268,922,742
JBrowse link
G HHEX hematopoietically expressed homeobox involved_in ISO (PMID:12554669) BHF-UCL PMID:12554669 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,221
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,858
JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in ISO (PMID:11566096) UniProt PMID:11566096 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G LOC100514323 NACHT, LRR and PYD domains-containing protein 1a-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:99,745,463...99,786,514 JBrowse link
G LOC102164431 nuclear RNA export factor 3-like involved_in ISO (PMID:11545741) UniProt PMID:11545741 NCBI chr  X:83,980,605...83,989,335 JBrowse link
G LOC110257686 nuclear RNA export factor 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:84,065,215...84,073,826 JBrowse link
G LOC110259351 heterogeneous nuclear ribonucleoproteins A2/B1 pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:72,035,950...72,039,615 JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:239,492,573...239,543,925
Ensembl chr 1:239,374,934...239,543,585
JBrowse link
G NUP107 nucleoporin 107 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr 5:32,989,661...33,040,565
Ensembl chr 5:32,989,794...33,042,575
JBrowse link
G NUP133 nucleoporin 133 involved_in ISO (PMID:11684705) UniProt PMID:11684705 NCBI chr14:60,353,420...60,404,952
Ensembl chr14:60,353,466...60,408,828
JBrowse link
G NUP155 nucleoporin 155 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839697|PMID:19070573) Ensembl
MGI
PMID:19070573 GO_REF:0000107 MGI:3839697 NCBI chr16:22,520,443...22,590,119
Ensembl chr16:22,516,990...22,589,838
JBrowse link
G NUP160 nucleoporin 160 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:14,840,056...14,891,567
Ensembl chr 2:14,840,391...14,893,036
JBrowse link
G NUP214 nucleoporin 214 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:83941|PMID:8896451) Ensembl
MGI
PMID:8896451 GO_REF:0000107 MGI:83941 NCBI chr 1:271,103,838...271,210,292
Ensembl chr 1:271,103,833...271,210,290
JBrowse link
G NUP85 nucleoporin 85 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:6,072,731...6,103,972
Ensembl chr12:6,064,567...6,103,979
JBrowse link
G NUP88 nucleoporin 88 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,562,455...51,603,095
Ensembl chr12:51,562,436...51,601,975
JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in ISO (PMID:19165146), (PMID:28984244) UniProt PMID:19165146 PMID:28984244 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,937,776...8,981,985
Ensembl chr 2:8,937,776...8,981,985
JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:6,174,442...6,201,941
Ensembl chr 5:6,169,398...6,201,940
JBrowse link
G RAE1 ribonucleic acid export 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:57,751,858...57,768,594
Ensembl chr17:57,751,843...57,768,595
JBrowse link
G RBM15B RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:33,664,387...33,671,047
Ensembl chr13:33,664,472...33,669,456
JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in ISO (PMID:20844015) UniProt PMID:20844015 NCBI chr 5:21,203,048...21,262,437
Ensembl chr 5:21,199,422...21,262,911
JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:32,289,464...32,298,652
Ensembl chr 7:32,289,480...32,298,589
JBrowse link
G THOC1 THO complex 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:106,039,262...106,088,125
Ensembl chr 6:106,040,042...106,088,026
JBrowse link
G THOC2 THO complex 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr  X:101,170,969...101,284,623
Ensembl chr  X:101,171,362...101,284,552
JBrowse link
G THOC3 THO complex 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:81,658,736...81,670,996
Ensembl chr 2:81,641,473...81,753,821
JBrowse link
G THOC5 THO complex 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,578,973...46,624,237
Ensembl chr14:46,579,838...46,653,656
JBrowse link
G THOC6 THO complex 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,161,442...39,164,631
Ensembl chr 3:39,161,434...39,168,302
JBrowse link
G THOC7 THO complex 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:45,335,160...45,356,233
Ensembl chr13:45,334,028...45,356,060
JBrowse link
G TMOD1 tropomodulin 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,374,934...239,543,585
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,790
JBrowse link
G YTHDC1 YTH domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:66,086,528...66,122,717
Ensembl chr 8:65,999,525...66,122,711
JBrowse link
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLR2D RNA polymerase II subunit D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:59,479,631...59,495,975
Ensembl chr15:59,479,538...59,498,178
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,790
JBrowse link
mRNA localization resulting in posttranscriptional regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1CF APOBEC1 complementation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4943819|PMID:20541607) Ensembl
MGI
PMID:20541607 GO_REF:0000107 MGI:4943819 NCBI chr14:98,908,585...98,990,362
Ensembl chr14:98,908,630...98,987,518
JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (MGI:5823498|PMID:28063167) MGI PMID:28063167 MGI:5823498 NCBI chr 2:15,680,723...15,790,580
Ensembl chr 2:15,680,787...15,792,633
JBrowse link
G ZNF385A zinc finger protein 385A involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3610775|PMID:16286649)
GO_Central
MGI
Ensembl
PMID:16286649 PMID:21873635 GO_REF:0000107 MGI:3610775 NCBI chr 5:19,560,317...19,583,254
Ensembl chr 5:19,560,317...19,583,221
JBrowse link
mRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARC activity regulated cytoskeleton associated protein involved_in ISO PMID:29328916 UniProt PMID:29328916 RGD:13514080 NCBI chr 4:1,517,986...1,521,403
Ensembl chr 4:1,517,980...1,521,403
JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr12:22,199,227...22,221,573
Ensembl chr12:22,199,233...22,222,270
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:12629046 RGD:9685156 NCBI chr 7:52,329,054...52,382,408
Ensembl chr 7:52,304,472...52,383,734
JBrowse link
G EIF5A eukaryotic translation initiation factor 5A involved_in IEA UniProt GO_REF:0000043 NCBI chr12:52,659,040...52,664,686 JBrowse link
G EIF5A2 eukaryotic translation initiation factor 5A2 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:109,510,815...109,530,450
Ensembl chr13:109,510,810...109,530,413
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO (MGI:3798322|PMID:18539120) UniProt PMID:18539120 MGI:3798322 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:11886857 RGD:625404 NCBI chr15:82,958,329...82,968,740
Ensembl chr15:82,958,362...82,968,736
JBrowse link
G HTT huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,196,969...25,243,272
JBrowse link
G IGF2BP2 insulin like growth factor 2 mRNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:123,485,619...123,650,050
Ensembl chr13:123,485,624...123,650,039
JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:92,104,786...92,272,264
Ensembl chr 9:92,104,847...92,272,211
JBrowse link
G KIF5C kinesin family member 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:3,190,341...3,361,470
Ensembl chr15:3,190,341...3,361,467
JBrowse link
G LOC100515533 oocyte-specific histone RNA stem-loop-binding protein 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:140,324,554...140,330,245 JBrowse link
G MAPT microtubule associated protein tau ISO RGD PMID:25847153 RGD:11061097 NCBI chr12:17,098,259...17,211,483
Ensembl chr12:17,095,587...17,211,368
JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:239,492,573...239,543,925
Ensembl chr 1:239,374,934...239,543,585
JBrowse link
G NDC1 NDC1 transmembrane nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:158,458,597...158,515,057
Ensembl chr 6:158,458,072...158,514,594
JBrowse link
G NUP35 nucleoporin 35 involved_in IEA UniProt GO_REF:0000104 NCBI chr15:88,587,753...88,616,310
Ensembl chr15:88,587,784...88,622,025
JBrowse link
G NUP50 nucleoporin 50 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:4,194,308...4,219,410
Ensembl chr 5:4,194,308...4,219,230
JBrowse link
G NUP58 nucleoporin 58 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:3,225,185...3,266,163
Ensembl chr11:3,225,157...3,266,076
JBrowse link
G NUP85 nucleoporin 85 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:6,072,731...6,103,972
Ensembl chr12:6,064,567...6,103,979
JBrowse link
G NUP93 nucleoporin 93 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:18,711,869...18,827,705
Ensembl chr 6:18,711,910...18,827,894
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:6,319,616...6,419,652
Ensembl chr 9:6,319,586...6,419,660
JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:99,408,422...99,411,964
Ensembl chr 4:99,408,464...99,413,492
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr13:66,483,620...66,524,411
Ensembl chr13:66,480,151...66,524,344
JBrowse link
G SLBP stem-loop binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:802,940...818,161
Ensembl chr 8:802,940...826,192
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
negative regulation of establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:62,797,244...62,831,459
Ensembl chr 4:62,796,999...62,831,422
JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUP153 nucleoporin 153 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,393,542...13,466,577
Ensembl chr 7:13,393,547...13,466,504
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,790
JBrowse link
nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G PRPF18 pre-mRNA processing factor 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:48,062,229...48,122,222 JBrowse link
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5H12orf50 chromosome 5 C12orf50 homolog involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:94,489,714...94,520,179
Ensembl chr 5:94,489,755...94,520,306
JBrowse link
G DDX19B DEAD-box helicase 19B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:13,328,241...13,358,139
Ensembl chr 6:13,325,540...13,392,110
JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:28,193,631...28,203,549
Ensembl chr 4:28,191,162...28,203,485
JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:268,894,281...268,922,752
Ensembl chr 1:268,894,276...268,922,742
JBrowse link
G HHEX hematopoietically expressed homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,221
JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:59,822,789...59,875,867
Ensembl chr15:59,822,797...59,879,423
JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3575625|PMID:15820316)
GO_Central
MGI
PMID:15820316 PMID:21873635 MGI:3575625 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G LOC102164431 nuclear RNA export factor 3-like involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3575625|PMID:15820316)
GO_Central
MGI
PMID:15820316 PMID:21873635 MGI:3575625 NCBI chr  X:83,980,605...83,989,335 JBrowse link
G LOC110257686 nuclear RNA export factor 3-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:84,065,215...84,073,826 JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107
G NUP133 nucleoporin 133 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:60,353,420...60,404,952
Ensembl chr14:60,353,466...60,408,828
JBrowse link
G NUP93 nucleoporin 93 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:18,711,869...18,827,705
Ensembl chr 6:18,711,910...18,827,894
JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3575625|PMID:15820316)
GO_Central
MGI
Ensembl
PMID:15820316 PMID:21873635 GO_REF:0000107 MGI:3575625 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,937,776...8,981,985
Ensembl chr 2:8,937,776...8,981,985
JBrowse link
G PCID2 PCI domain containing 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:78,541,278...78,556,784
Ensembl chr11:78,541,318...78,556,733
JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:6,174,442...6,201,941
Ensembl chr 5:6,169,398...6,201,940
JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:21,203,048...21,262,437
Ensembl chr 5:21,199,422...21,262,911
JBrowse link
G THOC2 THO complex 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:101,170,969...101,284,623
Ensembl chr  X:101,171,362...101,284,552
JBrowse link
G ZC3H11A zinc finger CCCH-type containing 11A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:64,518,895...64,554,871 JBrowse link
positive regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPSF6 cleavage and polyadenylation specific factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,525,668...33,559,941
Ensembl chr 5:33,525,684...33,618,945
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,093,667...124,185,352
JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,530,364...88,572,467
Ensembl chr 6:88,530,387...88,572,464
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,511
JBrowse link
positive regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,858,514...33,873,596
Ensembl chr 5:33,858,572...34,033,939
JBrowse link
G CCT3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:93,733,967...93,753,340
Ensembl chr 4:93,733,917...93,753,340
JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:79,924,338...79,941,926
Ensembl chr 3:79,924,507...79,946,236
JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr16:72,211,452...72,223,202
Ensembl chr16:72,208,012...72,223,114
JBrowse link
G CCT6A chaperonin containing TCP1 subunit 6A involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:16,843,801...16,858,819
Ensembl chr 3:16,843,625...16,858,819
JBrowse link
G CCT7 chaperonin containing TCP1 subunit 7 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:69,527,238...69,540,489
Ensembl chr 3:69,526,534...69,546,548
JBrowse link
G CCT8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr13:192,407,831...192,423,466
Ensembl chr13:192,406,280...192,423,413
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,218,928...125,228,881
Ensembl chr  X:125,218,923...125,229,529
JBrowse link
G NAF1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 8:51,972,288...52,012,818
Ensembl chr 8:51,968,483...52,012,936
JBrowse link
G NHP2 NHP2 ribonucleoprotein involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:80,223,439...80,227,614 JBrowse link
G NOP10 NOP10 ribonucleoprotein involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 7:80,161,024...80,162,299
Ensembl chr 7:80,161,081...80,162,529
JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr13:72,196,219...72,246,514
Ensembl chr13:72,200,511...72,248,582
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893
JBrowse link
G SHQ1 SHQ1, H/ACA ribonucleoprotein assembly factor involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr13:54,073,012...54,180,759
Ensembl chr13:54,071,656...54,180,751
JBrowse link
G TCP1 t-complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,590,140...7,600,709
Ensembl chr 1:7,589,521...7,601,795
JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPO5 exportin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,530,704...38,569,558
Ensembl chr 7:38,530,725...38,569,570
JBrowse link
regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chr 2:80,186,998...80,194,155 JBrowse link
G HTT huntingtin ISO RGD PMID:20185826 RGD:10403027 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8L A-kinase anchoring protein 8 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,184,735...62,241,631
Ensembl chr 2:62,155,437...62,221,936
JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,822,789...59,875,867
Ensembl chr15:59,822,797...59,879,423
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:75,335,565...75,414,659
Ensembl chr16:75,335,246...75,367,184
JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,884,708...29,996,285
Ensembl chr13:29,884,712...29,996,360
JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,916,716...44,940,732
Ensembl chr12:44,906,858...44,952,427
JBrowse link
G THOC2 THO complex 2 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) MGI PMID:24315442 MGI:5529717 NCBI chr  X:101,170,969...101,284,623
Ensembl chr  X:101,171,362...101,284,552
JBrowse link
G TPR translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,790
JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 acts_upstream_of_or_within ISO (MGI:2446384|PMID:12496368) MGI PMID:12496368 MGI:2446384 NCBI chr 6:88,530,364...88,572,467
Ensembl chr 6:88,530,387...88,572,464
JBrowse link
regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr  X:125,218,928...125,228,881
Ensembl chr  X:125,218,923...125,229,529
JBrowse link
G EXOSC10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,505
JBrowse link
RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor involved_in ISO (PMID:28418038) UniProt PMID:28418038 NCBI chr12:1,099,239...1,103,058
Ensembl chr12:1,091,976...1,103,054
JBrowse link
G LOC100153087 nuclear RNA export factor 2 acts_upstream_of_or_within ISO (MGI:3587445|PMID:16027110) MGI PMID:16027110 MGI:3587445 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G NUP153 nucleoporin 153 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:13,393,542...13,466,577
Ensembl chr 7:13,393,547...13,466,504
JBrowse link
G NUP155 nucleoporin 155 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:22,520,443...22,590,119
Ensembl chr16:22,516,990...22,589,838
JBrowse link
G NUP188 nucleoporin 188 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:269,259,496...269,312,872
Ensembl chr 1:269,259,519...269,313,650
JBrowse link
G NUP214 nucleoporin 214 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:271,103,838...271,210,292
Ensembl chr 1:271,103,833...271,210,290
JBrowse link
G NUP62 nucleoporin 62 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:54,921,627...54,945,705
Ensembl chr 6:54,921,627...54,923,227
JBrowse link
G NXF1 nuclear RNA export factor 1 acts_upstream_of_or_within ISO (MGI:2154056|PMID:11579093) MGI PMID:11579093 MGI:2154056 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,937,776...8,981,985
Ensembl chr 2:8,937,776...8,981,985
JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2154056|PMID:11579093) Ensembl
MGI
PMID:11579093 GO_REF:0000107 MGI:2154056 NCBI chr17:30,338,379...30,341,629
Ensembl chr17:30,338,391...30,341,629
JBrowse link
G RAE1 ribonucleic acid export 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:57,751,858...57,768,594
Ensembl chr17:57,751,843...57,768,595
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in ISO (PMID:11952838) UniProt PMID:11952838 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,790
JBrowse link
G XPO5 exportin 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:38,530,704...38,569,558
Ensembl chr 7:38,530,725...38,569,570
JBrowse link
RNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20691904) UniProt PMID:20691904 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
RNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,790
JBrowse link
RNA localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
RNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:17004321) RGD
HGNC-UCL
PMID:14523087 PMID:17004321 RGD:9685480 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,858
JBrowse link
G LOC100153087 nuclear RNA export factor 2 involved_in ISO (PMID:11566096) UniProt PMID:11566096 NCBI chr  X:83,338,757...83,361,973 JBrowse link
G SIDT1 SID1 transmembrane family member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:146,300,172...146,396,552
Ensembl chr13:146,300,172...146,396,543
JBrowse link
G SIDT2 SID1 transmembrane family member 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:44,543,648...44,559,717
Ensembl chr 9:44,543,701...44,559,716
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
rRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3822232|PMID:18809582)
GO_Central
Ensembl
MGI
PMID:18809582 PMID:21873635 GO_REF:0000107 MGI:3822232 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,296...52,781,740
JBrowse link
G TSC1 TSC complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,636,530...272,685,948
Ensembl chr 1:272,636,532...272,685,952
JBrowse link
rRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRPL18 mitochondrial ribosomal protein L18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,581,763...7,590,037
Ensembl chr 1:7,581,763...7,590,032
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G TST thiosulfate sulfurtransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,749,264...10,759,623
Ensembl chr 5:10,746,890...10,759,623
JBrowse link
rRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TST thiosulfate sulfurtransferase involved_in ISO (PMID:21685364) UniProt PMID:21685364 NCBI chr 5:10,749,264...10,759,623
Ensembl chr 5:10,746,890...10,759,623
JBrowse link
scaRNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,858,514...33,873,596
Ensembl chr 5:33,858,572...34,033,939
JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:79,924,338...79,941,926
Ensembl chr 3:79,924,507...79,946,236
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,218,928...125,228,881
Ensembl chr  X:125,218,923...125,229,529
JBrowse link
G TCP1 t-complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,590,140...7,600,709
Ensembl chr 1:7,589,521...7,601,795
JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,954,674...52,968,371
Ensembl chr12:52,954,669...52,974,741
JBrowse link
snoRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBL fibrillarin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,314,782...48,326,433
Ensembl chr 6:48,314,783...48,326,436
JBrowse link
G NOP58 NOP58 ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,893,589...105,930,458
Ensembl chr15:105,850,294...105,930,459
JBrowse link
G PIH1D1 PIH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,524,172...54,529,700
Ensembl chr 6:54,524,172...54,537,588
JBrowse link
G PRPF31 pre-mRNA processing factor 31 NOT|involved_in ISO (PMID:17636026) UniProt PMID:17636026 NCBI chr 6:55,995,087...56,011,507
Ensembl chr 6:55,995,089...56,011,430
JBrowse link
G ZNHIT3 zinc finger HIT-type containing 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:38,013,931...38,027,928
Ensembl chr12:38,013,967...38,027,923
JBrowse link
G ZNHIT6 zinc finger HIT-type containing 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:130,298,109...130,409,569
Ensembl chr 4:130,298,107...130,406,940
JBrowse link
snRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHAX phosphorylated adaptor for RNA export involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:1891494|PMID:10786834)
(PMID:21873635)
InterPro
MGI
GO_Central
PMID:10786834 PMID:21873635 GO_REF:0000002 MGI:1891494 NCBI chr 2:129,713,643...129,724,524
Ensembl chr 2:129,713,642...129,724,522
JBrowse link
snRNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAN RAN, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:24,312,810...24,318,024
Ensembl chr14:24,311,577...24,317,789
JBrowse link
G SNUPN snurportin 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 7:58,038,917...58,065,972
Ensembl chr 7:58,038,953...58,071,277
JBrowse link
telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,954,674...52,968,371
Ensembl chr12:52,954,669...52,974,741
JBrowse link
tRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOL6 nucleolar protein 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:33,022,035...33,035,201
Ensembl chr10:33,022,035...33,035,201
JBrowse link
G SSB small RNA binding exonuclease protection factor La involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:76,088,587...76,099,517
Ensembl chr15:76,088,641...76,100,800
JBrowse link
G XPOT exportin for tRNA involved_in ISO (PMID:9660920) UniProt PMID:9660920 NCBI chr 5:28,678,971...28,875,336
Ensembl chr 5:28,716,922...28,929,964
JBrowse link
tRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOMM20 translocase of outer mitochondrial membrane 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:56,113,087...56,127,686
Ensembl chr14:56,113,192...56,127,677
JBrowse link
G TOMM20L translocase of outer mitochondrial membrane 20 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:187,474,745...187,496,040
Ensembl chr 1:187,475,004...187,485,873
JBrowse link
tRNA re-export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPOT exportin for tRNA involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 5:28,678,971...28,875,336
Ensembl chr 5:28,716,922...28,929,964
JBrowse link
tRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YBX1 Y-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16574
    localization 5969
      macromolecule localization 2801
        RNA localization 144
          RNA localization to chromatin 1
          RNA localization to nucleus + 19
          establishment of RNA localization + 107
          intracellular mRNA localization + 14
          maintenance of RNA location + 0
          mitochondrial RNA localization + 0
          pole plasm RNA localization + 0
          snoRNA localization 6
          telomerase RNA localization + 19
paths to the root