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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA localization
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Accession:GO:0006403 term browser browse the term
Definition:A process in which RNA is transported to, or maintained in, a specific location.
Synonyms:exact_synonym: RNA localisation;   establishment and maintenance of RNA localization


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RNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:14614102 RGD:1299544 NCBI chr17:48,997,385...49,056,145
Ensembl chr17:48,997,385...49,056,145
JBrowse link
G PRPF6 pre-mRNA processing factor 6 acts_upstream_of_or_within IMP (PMID:20797886) MGI PMID:20797886 NCBI chr20:63,981,132...64,033,100
Ensembl chr20:63,981,132...64,033,100
JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5051946|PMID:21729784) Ensembl
MGI
PMID:21729784 GO_REF:0000107 MGI:5051946 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788
JBrowse link
dsRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLOT1 flotillin 1 involved_in IMP (PMID:25204797) UniProt PMID:25204797 NCBI chr 6:30,727,709...30,742,847
Ensembl chr 6:30,727,709...30,742,732
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 acts_upstream_of_or_within IMP (PMID:21266579) MGI PMID:21266579 NCBI chr 3:16,315,845...16,513,699
Ensembl chr 3:16,313,574...16,514,026
JBrowse link
G RFTN2 raftlin family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947923|PMID:21266579) Ensembl
MGI
PMID:21266579 GO_REF:0000107 MGI:4947923 NCBI chr 2:197,568,224...197,675,794
Ensembl chr 2:197,568,224...197,676,045
JBrowse link
establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IMP (PMID:26586433) BHF-UCL PMID:26586433 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATR ATR serine/threonine kinase involved_in IMP (PMID:26586433) BHF-UCL PMID:26586433 NCBI chr 3:142,449,235...142,578,793
Ensembl chr 3:142,449,007...142,578,733
JBrowse link
intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BICD1 BICD cargo adaptor 1 involved_in NAS (PMID:9367685) UniProt PMID:9367685 NCBI chr12:32,106,773...32,383,637
Ensembl chr12:32,106,835...32,383,633
JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683131|PMID:12843282) Ensembl
MGI
PMID:12843282 GO_REF:0000107 MGI:2683131 NCBI chr17:40,140,506...40,172,172
Ensembl chr17:40,140,318...40,172,171
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:2683131|PMID:12843282) MGI PMID:12843282 MGI:2683131 NCBI chr20:49,113,339...49,219,295
Ensembl chr20:49,113,339...49,188,367
JBrowse link
G ZNF385A zinc finger protein 385A acts_upstream_of_or_within ISO (MGI:3610775|PMID:16286649) MGI PMID:16286649 MGI:3610775 NCBI chr12:54,369,134...54,391,610
Ensembl chr12:54,369,133...54,391,298
JBrowse link
miRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA (PMID:24356509) UniProt PMID:24356509 NCBI chr 7:26,189,920...26,200,775
Ensembl chr 7:26,171,151...26,201,529
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 3:30,606,472...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IDA (PMID:27559612) UniProt PMID:27559612 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGFG1 ArfGAP with FG repeats 1 involved_in TAS (PMID:7634337) PINC PMID:7634337 NCBI chr 2:227,472,156...227,561,217
Ensembl chr 2:227,472,152...227,561,217
JBrowse link
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IMP
IBA
(PMID:23177736)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:23177736 NCBI chr17:18,183,828...18,209,954
Ensembl chr17:18,183,078...18,209,954
JBrowse link
G ALYREF Aly/REF export factor involved_in IMP
IBA
(PMID:17190602), (PMID:25662211)
(PMID:21873635)
UniProt
GO_Central
PMID:17190602 PMID:21873635 PMID:25662211 NCBI chr17:81,887,835...81,891,587
Ensembl chr17:81,887,835...81,891,586
JBrowse link
G CHTOP chromatin target of PRMT1 involved_in IDA
IBA
(PMID:23299939)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:23299939 NCBI chr 1:153,634,066...153,646,306
Ensembl chr 1:153,633,982...153,646,306
JBrowse link
G DDX19B DEAD-box helicase 19B involved_in TAS (PMID:10428971) PINC PMID:10428971 NCBI chr16:70,289,767...70,335,305
Ensembl chr16:70,289,663...70,335,305
JBrowse link
G DDX25 DEAD-box helicase 25 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:125,903,328...125,928,843
Ensembl chr11:125,903,348...125,943,702
JBrowse link
G DDX39A DExD-box helicase 39A involved_in IGI
IBA
(PMID:15047853)
(PMID:21873635)
UniProt
GO_Central
PMID:15047853 PMID:21873635 NCBI chr19:14,408,798...14,419,383
Ensembl chr19:14,408,798...14,419,383
JBrowse link
G DDX39B DExD-box helicase 39B involved_in IBA
IGI
IDA
(PMID:21873635)
(PMID:15047853)
(PMID:17190602)
GO_Central
UniProt
PMID:15047853 PMID:17190602 PMID:21873635 NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448
JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 8:109,334,347...109,345,954
Ensembl chr 8:109,334,324...109,345,954
JBrowse link
G ERVK-6 endogenous retrovirus group K member 6, envelope involved_in IDA
IMP
(PMID:10557333), (PMID:11581404)
(PMID:10516058), (PMID:11000203)
UniProt PMID:10516058 PMID:10557333 PMID:11000203 PMID:11581404
G FYTTD1 forty-two-three domain containing 1 involved_in IMP
IEA
IBA
(PMID:19836239)
(PMID:21873635)
UniProt
InterPro
GO_Central
PMID:19836239 PMID:21873635 GO_REF:0000002 NCBI chr 3:197,749,533...197,787,596
Ensembl chr 3:197,737,179...197,787,596
JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:128,504,692...128,542,292
Ensembl chr 9:128,504,655...128,543,874
JBrowse link
G HHEX hematopoietically expressed homeobox involved_in IDA (PMID:12554669) BHF-UCL PMID:12554669 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IEA
IDA
(PMID:10567417) InterPro
UniProt
PMID:10567417 GO_REF:0000002 NCBI chr 7:26,189,920...26,200,775
Ensembl chr 7:26,171,151...26,201,529
JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:46,235,130...46,286,297
Ensembl chr21:46,235,133...46,286,297
JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IMP
IBA
(PMID:17190602), (PMID:26382858)
(PMID:21873635)
UniProt
GO_Central
PMID:17190602 PMID:21873635 PMID:26382858 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748
JBrowse link
G NUP107 nucleoporin 107 involved_in IBA
IEA
IDA
(PMID:21873635)
(PMID:11684705)
GO_Central
UniProt
PMID:11684705 PMID:21873635 GO_REF:0000104 NCBI chr12:68,686,971...68,745,809
Ensembl chr12:68,686,951...68,745,809
JBrowse link
G NUP133 nucleoporin 133 involved_in IDA (PMID:11684705) UniProt PMID:11684705 NCBI chr 1:229,440,259...229,508,342
Ensembl chr 1:229,440,259...229,508,341
JBrowse link
G NUP155 nucleoporin 155 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3839697|PMID:19070573) MGI
Ensembl
PMID:19070573 GO_REF:0000107 MGI:3839697 NCBI chr 5:37,288,137...37,371,106
Ensembl chr 5:37,288,137...37,371,106
JBrowse link
G NUP160 nucleoporin 160 involved_in IDA (PMID:11684705) UniProt PMID:11684705 NCBI chr11:47,778,083...47,848,544
Ensembl chr11:47,778,087...47,848,555
JBrowse link
G NUP214 nucleoporin 214 involved_in
acts_upstream_of_or_within
IMP
ISO
(PMID:10557333)
(MGI:83941|PMID:8896451)
UniProt
MGI
PMID:8896451 PMID:10557333 MGI:83941 NCBI chr 9:131,125,586...131,234,663
Ensembl chr 9:131,125,586...131,234,663
JBrowse link
G NUP85 nucleoporin 85 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:75,205,557...75,235,758
Ensembl chr17:75,205,659...75,235,758
JBrowse link
G NUP88 nucleoporin 88 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:5,384,833...5,419,662
Ensembl chr17:5,360,963...5,419,676
JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in IEA
IDA
(PMID:19165146), (PMID:28984244) InterPro
UniProt
PMID:19165146 PMID:28984244 GO_REF:0000002 NCBI chr11:62,792,125...62,805,443
Ensembl chr11:62,792,123...62,806,302
JBrowse link
G NXF2 nuclear RNA export factor 2 involved_in NAS (PMID:11073998) UniProt PMID:11073998 NCBI chr  X:102,247,167...102,326,722
Ensembl chr  X:102,247,167...102,326,722
JBrowse link
G NXF2B nuclear RNA export factor 2B involved_in NAS (PMID:11073998) UniProt PMID:11073998 NCBI chr  X:102,360,395...102,440,008
Ensembl chr  X:102,360,396...102,439,932
JBrowse link
G NXF3 nuclear RNA export factor 3 involved_in IDA
IEA
(PMID:11545741) UniProt
InterPro
PMID:11545741 GO_REF:0000002 NCBI chr  X:103,075,810...103,093,143
Ensembl chr  X:103,075,810...103,093,143
JBrowse link
G NXF5 nuclear RNA export factor 5 involved_in IDA (PMID:11566096) UniProt PMID:11566096 NCBI chr  X:101,832,112...101,857,577
Ensembl chr  X:101,832,112...101,857,577
JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:42,583,721...42,614,918
Ensembl chr22:42,583,721...42,614,962
JBrowse link
G RAE1 ribonucleic acid export 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:57,351,239...57,379,202
Ensembl chr20:57,351,223...57,379,211
JBrowse link
G RBM15B RNA binding motif protein 15B involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:51,391,285...51,397,908
Ensembl chr 3:51,391,285...51,397,908
JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IDA (PMID:20844015) UniProt PMID:20844015 NCBI chr12:55,752,463...55,817,724
Ensembl chr12:55,752,463...55,817,724
JBrowse link
G SEM1 SEM1 26S proteasome subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:96,481,626...96,709,846
Ensembl chr 7:96,481,626...96,709,891
JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in TAS (PMID:16488880) UniProt PMID:16488880 NCBI chr16:18,804,858...18,926,428
Ensembl chr16:18,804,860...18,926,408
JBrowse link
G SMG5 SMG5 nonsense mediated mRNA decay factor involved_in TAS (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chr 1:156,249,224...156,291,516
Ensembl chr 1:156,249,224...156,282,825
JBrowse link
G SMG6 SMG6 nonsense mediated mRNA decay factor involved_in TAS (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chr17:2,059,839...2,303,836
Ensembl chr17:2,059,839...2,303,785
JBrowse link
G SMG7 SMG7 nonsense mediated mRNA decay factor involved_in TAS (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chr 1:183,471,993...183,554,193
Ensembl chr 1:183,472,216...183,598,246
JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in IDA (PMID:28984244) UniProt PMID:28984244 NCBI chr 6:36,594,362...36,605,600
Ensembl chr 6:36,594,353...36,605,600
JBrowse link
G THOC1 THO complex 1 involved_in IBA
IDA
IMP
(PMID:21873635)
(PMID:17190602)
(PMID:22144908)
GO_Central
UniProt
PMID:17190602 PMID:21873635 PMID:22144908 NCBI chr18:214,348...268,047
Ensembl chr18:214,520...268,050
JBrowse link
G THOC2 THO complex 2 involved_in IBA
IDA
IEA
(PMID:21873635)
(PMID:17190602)
GO_Central
UniProt
InterPro
PMID:17190602 PMID:21873635 GO_REF:0000002 NCBI chr  X:123,600,563...123,733,054
Ensembl chr  X:123,600,561...123,733,056
JBrowse link
G THOC3 THO complex 3 involved_in IEA
IBA
IDA
(PMID:21873635)
(PMID:17190602)
InterPro
GO_Central
UniProt
PMID:17190602 PMID:21873635 GO_REF:0000002 NCBI chr 5:175,959,531...176,034,905
Ensembl chr 5:175,917,873...176,034,680
JBrowse link
G THOC5 THO complex 5 involved_in IBA
IDA
(PMID:21873635)
(PMID:17190602)
GO_Central
UniProt
PMID:17190602 PMID:21873635 NCBI chr22:29,505,879...29,553,760
Ensembl chr22:29,505,879...29,555,216
JBrowse link
G THOC6 THO complex 6 involved_in IDA (PMID:17190602) UniProt PMID:17190602 NCBI chr16:3,024,035...3,027,750
Ensembl chr16:3,024,027...3,027,755
JBrowse link
G THOC7 THO complex 7 involved_in IBA
IDA
(PMID:21873635)
(PMID:17190602)
GO_Central
UniProt
PMID:17190602 PMID:21873635 NCBI chr 3:63,833,870...63,864,478
Ensembl chr 3:63,833,870...63,863,868
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in TAS (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chr19:18,831,405...18,868,230
Ensembl chr19:18,831,959...18,868,230
JBrowse link
G UPF2 UPF2 regulator of nonsense mediated mRNA decay involved_in TAS (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chr10:11,920,022...12,043,170
Ensembl chr10:11,920,022...12,043,170
JBrowse link
G YTHDC1 YTH domain containing 1 involved_in IDA (PMID:28984244) UniProt PMID:28984244 NCBI chr 4:68,310,387...68,350,093
Ensembl chr 4:68,310,387...68,350,090
JBrowse link
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLR2D RNA polymerase II subunit D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:127,843,553...127,858,155
Ensembl chr 2:127,843,553...127,858,155
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IDA (PMID:17897941) UniProt PMID:17897941 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
mRNA localization resulting in posttranscriptional regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1CF APOBEC1 complementation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943819|PMID:20541607) MGI
Ensembl
PMID:20541607 GO_REF:0000107 MGI:4943819 NCBI chr10:50,799,409...50,885,666
Ensembl chr10:50,799,409...50,885,675
JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (MGI:5823498|PMID:28063167) MGI PMID:28063167 MGI:5823498 NCBI chr11:46,743,048...46,846,280
Ensembl chr11:46,743,048...46,846,308
JBrowse link
G MEX3D mex-3 RNA binding family member D involved_in NAS (PMID:14769789) BHF-UCL PMID:14769789 NCBI chr19:1,554,672...1,568,325
Ensembl chr19:1,554,672...1,568,325
JBrowse link
G ZNF385A zinc finger protein 385A involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
(MGI:3610775|PMID:16286649)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:16286649 PMID:21873635 GO_REF:0000024 MGI:3610775 NCBI chr12:54,369,134...54,391,610
Ensembl chr12:54,369,133...54,391,298
JBrowse link
mRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAAS aladin WD repeat nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr12:53,307,456...53,321,610
Ensembl chr12:53,307,456...53,324,864
JBrowse link
G AHCTF1 AT-hook containing transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:246,839,098...246,931,948
Ensembl chr 1:246,839,098...246,931,948
JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:142,611,049...142,614,479
Ensembl chr 8:142,611,049...142,614,479
JBrowse link
G BCLAF1 BCL2 associated transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:136,256,627...136,289,846
Ensembl chr 6:136,256,627...136,289,851
JBrowse link
G BICD2 BICD cargo adaptor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:92,711,363...92,764,841
Ensembl chr 9:92,711,363...92,764,833
JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr17:40,140,506...40,172,172
Ensembl chr17:40,140,318...40,172,171
JBrowse link
G CETN2 centrin 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:152,826,994...152,830,757
Ensembl chr  X:152,826,994...152,830,757
JBrowse link
G CETN3 centrin 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:90,392,257...90,409,756
Ensembl chr 5:90,392,257...90,409,766
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:12629046 RGD:9685156 NCBI chr15:82,543,201...82,648,795
Ensembl chr15:82,543,201...82,648,861
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:80,134,369...80,147,128
Ensembl chr17:80,134,369...80,147,151
JBrowse link
G EIF5A eukaryotic translation initiation factor 5A involved_in IEA UniProt GO_REF:0000043 NCBI chr17:7,306,999...7,312,463
Ensembl chr17:7,306,999...7,312,463
JBrowse link
G EIF5A2 eukaryotic translation initiation factor 5A2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:170,888,418...170,908,637
Ensembl chr 3:170,888,418...170,908,644
JBrowse link
G EIF5AL1 eukaryotic translation initiation factor 5A like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:79,512,533...79,516,440
Ensembl chr10:79,512,533...79,516,440
JBrowse link
G ERVK-6 endogenous retrovirus group K member 6, envelope involved_in IEA UniProt GO_REF:0000043
G FMR1 FMRP translational regulator 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125
JBrowse link
G G3BP2 G3BP stress granule assembly factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:75,642,782...75,724,470
Ensembl chr 4:75,641,849...75,724,589
JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088
JBrowse link
G HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1 like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:52,617,525...52,643,773
Ensembl chr13:52,642,431...52,643,773
JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 involved_in ISO
IEA
RGD
Ensembl
PMID:11886857 GO_REF:0000107 RGD:625404 NCBI chr 2:177,212,694...177,223,959
Ensembl chr 2:177,212,563...177,223,958
JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:144,291,603...144,314,720
Ensembl chr 8:144,291,591...144,314,720
JBrowse link
G HTT huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:48,997,385...49,056,145
Ensembl chr17:48,997,385...49,056,145
JBrowse link
G IGF2BP2 insulin like growth factor 2 mRNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:185,643,130...185,825,046
Ensembl chr 3:185,643,130...185,825,042
JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,310,209...23,470,674
Ensembl chr 7:23,310,209...23,470,491
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in IEA UniProt GO_REF:0000043 NCBI chr19:6,413,102...6,424,811
Ensembl chr19:6,413,102...6,424,811
JBrowse link
G KIF5C kinesin family member 5C involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:148,875,227...149,026,759
Ensembl chr 2:148,875,227...149,026,759
JBrowse link
G LRPPRC leucine rich pentatricopeptide repeat containing involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:43,886,224...43,995,989
Ensembl chr 2:43,886,224...43,996,226
JBrowse link
G LUZP4 leucine zipper protein 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:115,289,715...115,307,563
Ensembl chr  X:115,289,715...115,307,563
JBrowse link
G MAGOH mago homolog, exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:53,226,900...53,238,518
Ensembl chr 1:53,226,900...53,238,518
JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr12:10,604,190...10,613,609
Ensembl chr12:10,604,193...10,613,609
JBrowse link
G MAPT microtubule associated protein tau ISO RGD PMID:25847153 RGD:11061097 NCBI chr17:45,894,538...46,028,334
Ensembl chr17:45,894,527...46,028,334
JBrowse link
G MVP major vault protein involved_in IEA UniProt GO_REF:0000043 NCBI chr16:29,820,394...29,848,039
Ensembl chr16:29,820,394...29,848,039
JBrowse link
G MX2 MX dynamin like GTPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr21:41,361,944...41,409,393
Ensembl chr21:41,361,999...41,409,393
JBrowse link
G MYO1C myosin IC involved_in IEA UniProt GO_REF:0000043 NCBI chr17:1,464,186...1,492,686
Ensembl chr17:1,464,186...1,492,686
JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748
JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:196,932,729...196,942,528
Ensembl chr 3:196,935,402...196,942,594
JBrowse link
G NCBP3 nuclear cap binding subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:3,802,158...3,846,246
Ensembl chr17:3,802,158...3,846,246
JBrowse link
G NDC1 NDC1 transmembrane nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:53,765,478...53,838,296
Ensembl chr 1:53,765,478...53,838,463
JBrowse link
G NPIPA1 nuclear pore complex interacting protein family member A1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:14,937,443...14,952,056
Ensembl chr16:14,922,802...14,952,060
JBrowse link
G NPIPA2 nuclear pore complex interacting protein family member A2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:14,745,595...14,765,448
Ensembl chr16:14,748,066...14,765,413
Ensembl chr16:14,748,066...14,765,413
JBrowse link
G NUP153 nucleoporin 153 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,925
JBrowse link
G NUP188 nucleoporin 188 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:128,947,699...129,007,096
Ensembl chr 9:128,947,699...129,007,096
JBrowse link
G NUP205 nucleoporin 205 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:135,557,917...135,648,753
Ensembl chr 7:135,557,917...135,648,757
JBrowse link
G NUP210 nucleoporin 210 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:13,316,235...13,420,322
Ensembl chr 3:13,316,235...13,420,322
JBrowse link
G NUP35 nucleoporin 35 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:183,117,480...183,161,680
Ensembl chr 2:183,117,513...183,161,680
JBrowse link
G NUP37 nucleoporin 37 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:102,073,103...102,120,131
Ensembl chr12:102,073,103...102,120,120
JBrowse link
G NUP42 nucleoporin 42 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,181,298...23,201,011
Ensembl chr 7:23,181,841...23,201,011
JBrowse link
G NUP43 nucleoporin 43 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:149,724,315...149,746,529
Ensembl chr 6:149,724,315...149,749,665
JBrowse link
G NUP50 nucleoporin 50 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:45,163,925...45,188,017
Ensembl chr22:45,163,925...45,188,017
JBrowse link
G NUP54 nucleoporin 54 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:76,114,664...76,148,434
Ensembl chr 4:76,114,659...76,148,444
JBrowse link
G NUP58 nucleoporin 58 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:25,301,084...25,349,795
Ensembl chr13:25,301,556...25,349,800
JBrowse link
G NUP62 nucleoporin 62 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:49,906,825...49,929,504
Ensembl chr19:49,906,825...49,929,763
JBrowse link
G NUP85 nucleoporin 85 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:75,205,557...75,235,758
Ensembl chr17:75,205,659...75,235,758
JBrowse link
G NUP88 nucleoporin 88 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:5,384,833...5,419,662
Ensembl chr17:5,360,963...5,419,676
JBrowse link
G NUP93 nucleoporin 93 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:56,730,129...56,850,286
Ensembl chr16:56,730,118...56,850,286
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA UniProt GO_REF:0000043 NCBI chr11:3,675,010...3,797,554
Ensembl chr11:3,671,083...3,797,792
JBrowse link
G NUTF2 nuclear transport factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:67,846,933...67,872,567
Ensembl chr16:67,846,923...67,872,567
JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:62,792,125...62,805,443
Ensembl chr11:62,792,123...62,806,302
JBrowse link
G NXT2 nuclear transport factor 2 like export factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:109,535,824...109,544,698
Ensembl chr  X:109,535,781...109,544,698
JBrowse link
G PARP11 poly(ADP-ribose) polymerase family member 11 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:3,808,861...3,873,471
Ensembl chr12:3,791,047...3,873,448
JBrowse link
G POM121 POM121 transmembrane nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:72,879,357...72,951,459
Ensembl chr 7:72,879,365...72,951,440
JBrowse link
G POM121B POM121 transmembrane nucleoporin B (pseudogene) involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:73,293,495...73,303,235
Ensembl chr 7:73,293,497...73,301,161
JBrowse link
G POM121C POM121 transmembrane nucleoporin C involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:75,416,786...75,486,299
Ensembl chr 7:75,416,786...75,486,299
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:163,414,486...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RANBP17 RAN binding protein 17 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:170,862,018...171,300,015
Ensembl chr 5:170,861,870...171,300,015
JBrowse link
G RANBP2 RAN binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:108,719,446...108,785,809
Ensembl chr 2:108,719,482...108,785,809
JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:145,921,556...145,927,484
Ensembl chr 1:145,917,714...145,927,678
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:10,300,931...10,321,112
Ensembl chr 3:10,293,131...10,321,112
JBrowse link
G SEH1L SEH1 like nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr18:12,947,988...12,987,665
Ensembl chr18:12,947,133...12,987,536
JBrowse link
G SENP2 SUMO specific peptidase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:185,586,295...185,633,551
Ensembl chr 3:185,582,496...185,633,551
JBrowse link
G SLBP stem-loop binding protein involved_in IDA
IBA
(PMID:19155325)
(PMID:21873635)
UniProt
GO_Central
PMID:19155325 PMID:21873635 NCBI chr 4:1,692,731...1,715,876
Ensembl chr 4:1,692,731...1,712,344
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:58,000,919...58,007,273
Ensembl chr17:58,000,919...58,007,346
JBrowse link
G SRSF7 serine and arginine rich splicing factor 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:38,743,599...38,751,494
Ensembl chr 2:38,743,599...38,751,494
JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA UniProt GO_REF:0000043 NCBI chr17:28,662,183...28,702,679
Ensembl chr17:28,662,198...28,702,679
JBrowse link
G TNKS tankyrase involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:9,555,230...9,782,346
Ensembl chr 8:9,555,912...9,782,346
JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in IEA UniProt GO_REF:0000043 NCBI chr13:114,281,598...114,305,817
Ensembl chr13:114,281,601...114,305,817
JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:119,805,311...119,853,028
Ensembl chr  X:119,805,311...119,852,998
JBrowse link
G XPO1 exportin 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:61,477,849...61,538,522
Ensembl chr 2:61,476,032...61,538,741
JBrowse link
G ZC3H3 zinc finger CCCH-type containing 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:143,437,655...143,549,729
Ensembl chr 8:143,437,659...143,541,447
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IMP (PMID:17369404) UniProt PMID:17369404 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IMP (PMID:17369404) UniProt PMID:17369404 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
negative regulation of establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF1 telomeric repeat binding factor 1 involved_in IMP (PMID:26586433) BHF-UCL PMID:26586433 NCBI chr 8:73,008,856...73,048,123
Ensembl chr 8:73,008,856...73,048,123
JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUP153 nucleoporin 153 involved_in IDA (PMID:22253824) UniProt PMID:22253824 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,925
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IDA
IMP
(PMID:22253824)
(PMID:21613532)
UniProt PMID:21613532 PMID:22253824 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
nuclear retention of pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCID2 PCI domain containing 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:113,165,002...113,209,467
Ensembl chr13:113,177,536...113,208,715
JBrowse link
nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,704,894
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,759,234...37,832,117
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL157392.5 novel protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr10:13,610,047...13,655,929 JBrowse link
G EXOSC10 exosome component 10 involved_in IBA
IMP
(PMID:21873635)
(PMID:20699273)
GO_Central
UniProt
PMID:20699273 PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G PRPF18 pre-mRNA processing factor 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:13,586,811...13,645,344
Ensembl chr10:13,586,939...13,630,859
JBrowse link
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C12orf50 chromosome 12 open reading frame 50 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:87,980,035...88,030,212
Ensembl chr12:87,980,035...88,034,037
JBrowse link
G DDX19A DEAD-box helicase 19A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:70,346,871...70,373,383
Ensembl chr16:70,346,861...70,373,383
JBrowse link
G DDX19B DEAD-box helicase 19B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:70,289,767...70,335,305
Ensembl chr16:70,289,663...70,335,305
JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:125,903,328...125,928,843
Ensembl chr11:125,903,348...125,943,702
JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IMP
IBA
(PMID:23591820)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:23591820 NCBI chr 8:109,334,347...109,345,954
Ensembl chr 8:109,334,324...109,345,954
JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:128,504,692...128,542,292
Ensembl chr 9:128,504,655...128,543,874
JBrowse link
G HHEX hematopoietically expressed homeobox involved_in IMP (PMID:12554669) BHF-UCL PMID:12554669 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:127,480,807...127,526,886
Ensembl chr 2:127,436,207...127,526,886
JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IMP (PMID:23591820) UniProt PMID:23591820 NCBI chr21:46,235,130...46,286,297
Ensembl chr21:46,235,133...46,286,297
JBrowse link
G NUP133 nucleoporin 133 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:229,440,259...229,508,342
Ensembl chr 1:229,440,259...229,508,341
JBrowse link
G NUP93 nucleoporin 93 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:56,730,129...56,850,286
Ensembl chr16:56,730,118...56,850,286
JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3575625|PMID:15820316)
GO_Central
MGI
PMID:15820316 PMID:21873635 MGI:3575625 NCBI chr11:62,792,125...62,805,443
Ensembl chr11:62,792,123...62,806,302
JBrowse link
G NXF2 nuclear RNA export factor 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:102,247,167...102,326,722
Ensembl chr  X:102,247,167...102,326,722
JBrowse link
G NXF2B nuclear RNA export factor 2B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:102,360,395...102,440,008
Ensembl chr  X:102,360,396...102,439,932
JBrowse link
G NXF3 nuclear RNA export factor 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3575625|PMID:15820316)
GO_Central
MGI
PMID:15820316 PMID:21873635 MGI:3575625 NCBI chr  X:103,075,810...103,093,143
Ensembl chr  X:103,075,810...103,093,143
JBrowse link
G NXF5 nuclear RNA export factor 5 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3575625|PMID:15820316)
GO_Central
MGI
PMID:15820316 PMID:21873635 MGI:3575625 NCBI chr  X:101,832,112...101,857,577
Ensembl chr  X:101,832,112...101,857,577
JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in IMP (PMID:19364924) UniProt PMID:19364924 NCBI chr14:23,321,457...23,326,163
Ensembl chr14:23,321,457...23,326,163
JBrowse link
G PCID2 PCI domain containing 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:113,165,002...113,209,467
Ensembl chr13:113,177,536...113,208,715
JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 involved_in IDA
IBA
(PMID:22928037)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:22928037 NCBI chr22:42,583,721...42,614,918
Ensembl chr22:42,583,721...42,614,962
JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:55,752,463...55,817,724
Ensembl chr12:55,752,463...55,817,724
JBrowse link
G THOC2 THO complex 2 involved_in IDA (PMID:22928037) UniProt PMID:22928037 NCBI chr  X:123,600,563...123,733,054
Ensembl chr  X:123,600,561...123,733,056
JBrowse link
G ZC3H11A zinc finger CCCH-type containing 11A involved_in IBA
IMP
(PMID:21873635)
(PMID:22928037)
GO_Central
UniProt
PMID:21873635 PMID:22928037 NCBI chr 1:203,795,623...203,854,126
Ensembl chr 1:203,795,623...203,854,999
JBrowse link
G ZC3H11B zinc finger CCCH-type containing 11B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:219,608,012...219,613,145
Ensembl chr 1:219,608,010...219,613,145
JBrowse link
positive regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IMP (PMID:17369404) UniProt PMID:17369404 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IMP (PMID:17369404) UniProt PMID:17369404 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPSF6 cleavage and polyadenylation specific factor 6 involved_in IMP (PMID:19864460) UniProt PMID:19864460 NCBI chr12:69,239,568...69,274,358
Ensembl chr12:69,239,569...69,274,358
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IDA (PMID:11402034) UniProt PMID:11402034 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IDA (PMID:21613532) UniProt PMID:21613532 NCBI chr 1:32,013,868...32,060,850
Ensembl chr 1:32,013,868...32,060,850
JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:196,932,729...196,942,528
Ensembl chr 3:196,935,402...196,942,594
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IMP (PMID:30842217) UniProt PMID:30842217 NCBI chr14:90,267,860...90,331,969
Ensembl chr14:90,267,860...90,331,969
JBrowse link
positive regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in IMP
HMP
(PMID:25467444) BHF-UCL PMID:25467444 NCBI chr12:69,585,459...69,601,570
Ensembl chr12:69,585,426...69,601,570
JBrowse link
G CCT3 chaperonin containing TCP1 subunit 3 involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 1:156,308,968...156,338,292
Ensembl chr 1:156,308,968...156,367,873
JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IMP
HMP
(PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:61,868,085...61,888,671
Ensembl chr 2:61,868,085...61,888,671
JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 5:10,249,921...10,266,412
Ensembl chr 5:10,249,929...10,266,389
JBrowse link
G CCT6A chaperonin containing TCP1 subunit 6A involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 7:56,051,765...56,063,989
Ensembl chr 7:56,051,685...56,063,989
JBrowse link
G CCT7 chaperonin containing TCP1 subunit 7 involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:73,233,425...73,253,008
Ensembl chr 2:73,233,420...73,253,021
JBrowse link
G CCT8 chaperonin containing TCP1 subunit 8 involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr21:29,056,326...29,073,648
Ensembl chr21:29,055,805...29,073,797
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IMP
HMP
(PMID:25467444) BHF-UCL PMID:25467444 NCBI chr  X:154,762,864...154,777,689
Ensembl chr  X:154,762,742...154,777,689
JBrowse link
G NAF1 nuclear assembly factor 1 ribonucleoprotein involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:163,109,133...163,166,910
Ensembl chr 4:163,110,073...163,166,890
JBrowse link
G NHP2 NHP2 ribonucleoprotein involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 5:178,149,463...178,153,885
Ensembl chr 5:178,149,463...178,153,894
JBrowse link
G NOP10 NOP10 ribonucleoprotein involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr15:34,341,719...34,343,136
Ensembl chr15:34,341,719...34,343,136
JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:128,064,611...128,153,914
Ensembl chr 3:128,064,778...128,153,914
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970
JBrowse link
G SHQ1 SHQ1, H/ACA ribonucleoprotein assembly factor involved_in HMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:72,725,702...72,848,475
Ensembl chr 3:72,749,277...72,861,914
JBrowse link
G TCP1 t-complex 1 involved_in HMP
IMP
(PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 6:159,778,498...159,789,602
Ensembl chr 6:159,778,498...159,789,703
JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAN RAN, member RAS oncogene family involved_in IC (PMID:14681208) BHF-UCL PMID:14681208 NCBI chr12:130,871,879...130,877,678
Ensembl chr12:130,872,037...130,877,678
JBrowse link
G XPO5 exportin 5 involved_in IMP
NAS
IDA
(PMID:14681208)
(PMID:19965479)
(PMID:15613540)
BHF-UCL
UniProt
PMID:14681208 PMID:15613540 PMID:19965479 NCBI chr 6:43,522,334...43,576,038
Ensembl chr 6:43,522,334...43,576,038
JBrowse link
regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chr 5:178,204,533...178,211,163
Ensembl chr 5:178,204,533...178,211,163
JBrowse link
G HTT huntingtin ISO RGD PMID:20185826 RGD:10403027 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957
JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8L A-kinase anchoring protein 8 like involved_in IDA (PMID:11402034) UniProt PMID:11402034 NCBI chr19:15,380,050...15,418,988
Ensembl chr19:15,380,050...15,419,141
JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IMP (PMID:17234882) UniProt PMID:17234882 NCBI chr 2:127,480,807...127,526,886
Ensembl chr 2:127,436,207...127,526,886
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in IDA (PMID:28418038) UniProt PMID:28418038 NCBI chr 5:6,599,239...6,633,044
Ensembl chr 5:6,599,239...6,633,291
JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IMP (PMID:19141475) UniProt PMID:19141475 NCBI chr 3:47,016,431...47,164,113
Ensembl chr 3:47,016,429...47,164,113
JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISS UniProt GO_REF:0000024 NCBI chr17:28,662,183...28,702,679
Ensembl chr17:28,662,198...28,702,679
JBrowse link
G THOC2 THO complex 2 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) MGI PMID:24315442 MGI:5529717 NCBI chr  X:123,600,563...123,733,054
Ensembl chr  X:123,600,561...123,733,056
JBrowse link
G THOC5 THO complex 5 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) MGI PMID:24315442 MGI:5529717 NCBI chr22:29,505,879...29,553,760
Ensembl chr22:29,505,879...29,555,216
JBrowse link
G TPR translocated promoter region, nuclear basket protein NOT|involved_in IMP (PMID:22253824) UniProt PMID:22253824 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2446384|PMID:12496368) UniProt
MGI
PMID:12496368 GO_REF:0000024 MGI:2446384 NCBI chr 1:32,013,868...32,060,850
Ensembl chr 1:32,013,868...32,060,850
JBrowse link
regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP2 decapping mRNA 2 involved_in IMP (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr 5:112,976,702...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IMP (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr  X:154,762,864...154,777,689
Ensembl chr  X:154,762,742...154,777,689
JBrowse link
G EXOSC10 exosome component 10 involved_in IMP (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IMP (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr16:14,435,701...14,630,286
Ensembl chr16:14,435,700...14,632,728
JBrowse link
RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor involved_in IDA (PMID:28418038) UniProt PMID:28418038 NCBI chr17:81,887,835...81,891,587
Ensembl chr17:81,887,835...81,891,586
JBrowse link
G DDX39A DExD-box helicase 39A involved_in TAS Reactome Reactome:R-HSA-159101 NCBI chr19:14,408,798...14,419,383
Ensembl chr19:14,408,798...14,419,383
JBrowse link
G DDX39B DExD-box helicase 39B involved_in TAS Reactome Reactome:R-HSA-159101 NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448
JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in IC (PMID:8521471) HGNC-UCL PMID:8521471 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088
JBrowse link
G NPAP1 nuclear pore associated protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:24,675,775...24,683,393
Ensembl chr15:24,675,775...24,683,393
JBrowse link
G NUP153 nucleoporin 153 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,925
JBrowse link
G NUP155 nucleoporin 155 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:37,288,137...37,371,106
Ensembl chr 5:37,288,137...37,371,106
JBrowse link
G NUP188 nucleoporin 188 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:128,947,699...129,007,096
Ensembl chr 9:128,947,699...129,007,096
JBrowse link
G NUP214 nucleoporin 214 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:131,125,586...131,234,663
Ensembl chr 9:131,125,586...131,234,663
JBrowse link
G NUP62 nucleoporin 62 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:49,906,825...49,929,504
Ensembl chr19:49,906,825...49,929,763
JBrowse link
G NUP62CL nucleoporin 62 C-terminal like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:107,123,427...107,206,433
Ensembl chr  X:107,123,427...107,206,433
JBrowse link
G NXF1 nuclear RNA export factor 1 acts_upstream_of_or_within ISO (MGI:2154056|PMID:11579093) MGI PMID:11579093 MGI:2154056 NCBI chr11:62,792,125...62,805,443
Ensembl chr11:62,792,123...62,806,302
JBrowse link
G NXF5 nuclear RNA export factor 5 acts_upstream_of_or_within ISO (MGI:3587445|PMID:16027110) MGI PMID:16027110 MGI:3587445 NCBI chr  X:101,832,112...101,857,577
Ensembl chr  X:101,832,112...101,857,577
JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2154056|PMID:11579093) MGI
Ensembl
PMID:11579093 GO_REF:0000107 MGI:2154056 NCBI chr20:23,350,791...23,354,771
Ensembl chr20:23,350,791...23,354,771
JBrowse link
G POM121 POM121 transmembrane nucleoporin involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:72,879,357...72,951,459
Ensembl chr 7:72,879,365...72,951,440
JBrowse link
G POM121B POM121 transmembrane nucleoporin B (pseudogene) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:73,293,495...73,303,235
Ensembl chr 7:73,293,497...73,301,161
JBrowse link
G POM121C POM121 transmembrane nucleoporin C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:75,416,786...75,486,299
Ensembl chr 7:75,416,786...75,486,299
JBrowse link
G POM121L12 POM121 transmembrane nucleoporin like 12 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:53,035,633...53,036,925
Ensembl chr 7:53,035,633...53,036,925
JBrowse link
G POM121L2 POM121 transmembrane nucleoporin like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,308,377...27,312,273
Ensembl chr 6:27,285,903...27,312,273
JBrowse link
G RAE1 ribonucleic acid export 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:57,351,239...57,379,202
Ensembl chr20:57,351,223...57,379,211
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IMP (PMID:11952838) UniProt PMID:11952838 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
G XPO5 exportin 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:43,522,334...43,576,038
Ensembl chr 6:43,522,334...43,576,038
JBrowse link
RNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA (PMID:20691904) UniProt PMID:20691904 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
RNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPR translocated promoter region, nuclear basket protein involved_in IDA (PMID:9864356) UniProt PMID:9864356 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
RNA localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
RNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATXN2 ataxin 2 involved_in NAS (PMID:10814712) UniProt PMID:10814712 NCBI chr12:111,452,214...111,599,673
Ensembl chr12:111,443,485...111,599,676
JBrowse link
G CKAP5 cytoskeleton associated protein 5 involved_in ISS (PMID:15703215) HGNC-UCL PMID:15703215 NCBI chr11:46,743,048...46,846,280
Ensembl chr11:46,743,048...46,846,308
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA
ISO
(PMID:17004321) HGNC-UCL
RGD
PMID:14523087 PMID:17004321 RGD:9685480 NCBI chr 7:26,189,920...26,200,775
Ensembl chr 7:26,171,151...26,201,529
JBrowse link
G NXF2 nuclear RNA export factor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:102,247,167...102,326,722
Ensembl chr  X:102,247,167...102,326,722
JBrowse link
G NXF2B nuclear RNA export factor 2B involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:102,360,395...102,440,008
Ensembl chr  X:102,360,396...102,439,932
JBrowse link
G NXF5 nuclear RNA export factor 5 involved_in IDA (PMID:11566096) UniProt PMID:11566096 NCBI chr  X:101,832,112...101,857,577
Ensembl chr  X:101,832,112...101,857,577
JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 involved_in NAS (PMID:10814712) UniProt PMID:10814712 NCBI chr16:5,239,752...7,713,343
Ensembl chr16:5,239,802...7,713,340
JBrowse link
G RTRAF RNA transcription, translation and transport factor involved_in TAS (PMID:24608264) UniProt PMID:24608264 NCBI chr14:51,989,546...52,010,694
Ensembl chr14:51,989,514...52,010,694
JBrowse link
G SIDT1 SID1 transmembrane family member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:113,532,296...113,629,579
Ensembl chr 3:113,532,555...113,629,575
JBrowse link
G SIDT2 SID1 transmembrane family member 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:28277980)
GO_Central
UniProt
PMID:21873635 PMID:28277980 NCBI chr11:117,178,743...117,197,442
Ensembl chr11:117,178,736...117,197,445
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IMP (PMID:29073095) UniProt PMID:29073095 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
rRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3822232|PMID:18809582)
GO_Central
MGI
PMID:18809582 PMID:21873635 MGI:3822232 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810
JBrowse link
G TSC1 TSC complex subunit 1 involved_in IMP (PMID:17308101) UniProt PMID:17308101 NCBI chr 9:132,891,349...132,945,269
Ensembl chr 9:132,891,348...132,946,874
JBrowse link
rRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRPL18 mitochondrial ribosomal protein L18 involved_in IDA (PMID:21685364) UniProt PMID:21685364 NCBI chr 6:159,789,812...159,798,429
Ensembl chr 6:159,789,812...159,798,436
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA (PMID:20691904) UniProt PMID:20691904 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
G TST thiosulfate sulfurtransferase involved_in IMP (PMID:20663881) UniProt PMID:20663881 NCBI chr22:37,010,859...37,020,183
Ensembl chr22:37,010,859...37,020,183
JBrowse link
rRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TST thiosulfate sulfurtransferase involved_in IDA (PMID:21685364) UniProt PMID:21685364 NCBI chr22:37,010,859...37,020,183
Ensembl chr22:37,010,859...37,020,183
JBrowse link
scaRNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in IMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr12:69,585,459...69,601,570
Ensembl chr12:69,585,426...69,601,570
JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:61,868,085...61,888,671
Ensembl chr 2:61,868,085...61,888,671
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr  X:154,762,864...154,777,689
Ensembl chr  X:154,762,742...154,777,689
JBrowse link
G TCP1 t-complex 1 involved_in IMP (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 6:159,778,498...159,789,602
Ensembl chr 6:159,778,498...159,789,703
JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IDA
IMP
(PMID:19285445)
(PMID:25467444)
UniProt
BHF-UCL
PMID:19285445 PMID:25467444 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502
JBrowse link
snoRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBL fibrillarin involved_in IMP (PMID:17636026) UniProt PMID:17636026 NCBI chr19:39,834,458...39,846,395
Ensembl chr19:39,834,458...39,846,379
JBrowse link
G NOP58 NOP58 ribonucleoprotein involved_in IMP (PMID:17636026) UniProt PMID:17636026 NCBI chr 2:202,265,763...202,303,661
Ensembl chr 2:202,265,736...202,303,661
JBrowse link
G PIH1D1 PIH1 domain containing 1 involved_in IMP (PMID:17636026) UniProt PMID:17636026 NCBI chr19:49,446,298...49,452,392
Ensembl chr19:49,446,298...49,453,497
JBrowse link
G PRPF31 pre-mRNA processing factor 31 NOT|involved_in IMP (PMID:17636026) UniProt PMID:17636026 NCBI chr19:54,115,706...54,131,719
Ensembl chr19:54,115,410...54,131,719
JBrowse link
G ZNHIT3 zinc finger HIT-type containing 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:36,486,681...36,499,312
Ensembl chr17:36,486,629...36,499,310
JBrowse link
G ZNHIT6 zinc finger HIT-type containing 6 involved_in IBA
IMP
(PMID:21873635)
(PMID:17636026)
GO_Central
UniProt
PMID:17636026 PMID:21873635 NCBI chr 1:85,649,417...85,708,458
Ensembl chr 1:85,649,417...85,708,433
JBrowse link
snRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCBP2 nuclear cap binding protein subunit 2 involved_in ISS
NAS
(PMID:7651522) UniProt PMID:7651522 GO_REF:0000024 NCBI chr 3:196,932,729...196,942,528
Ensembl chr 3:196,935,402...196,942,594
JBrowse link
G PHAX phosphorylated adaptor for RNA export involved_in
acts_upstream_of_or_within
TAS
ISO
IBA
(PMID:16687569)
(MGI:1891494|PMID:10786834)
(PMID:21873635)
BHF-UCL
MGI
GO_Central
PMID:10786834 PMID:16687569 PMID:21873635 MGI:1891494 NCBI chr 5:126,600,947...126,627,252
Ensembl chr 5:126,600,925...126,627,252
JBrowse link
snRNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAN RAN, member RAS oncogene family involved_in IMP (PMID:8636225) UniProt PMID:8636225 NCBI chr12:130,871,879...130,877,678
Ensembl chr12:130,872,037...130,877,678
JBrowse link
G SNUPN snurportin 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:75,598,086...75,626,461
Ensembl chr15:75,598,083...75,626,469
JBrowse link
telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WRAP53 WD repeat containing antisense to TP53 involved_in HMP
IMP
(PMID:25467444) BHF-UCL PMID:25467444 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502
JBrowse link
tRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOL6 nucleolar protein 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:33,460,811...33,473,924
Ensembl chr 9:33,461,353...33,473,930
JBrowse link
G SSB small RNA binding exonuclease protection factor La involved_in IMP (PMID:17308035) CAFA PMID:17308035 NCBI chr 2:169,798,871...169,812,064
Ensembl chr 2:169,791,933...169,812,064
JBrowse link
G XPOT exportin for tRNA involved_in IDA (PMID:9660920) UniProt PMID:9660920 NCBI chr12:64,404,392...64,451,125
Ensembl chr12:64,404,392...64,451,125
JBrowse link
tRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOMM20 translocase of outer mitochondrial membrane 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:235,109,341...235,128,837
Ensembl chr 1:235,109,341...235,128,837
JBrowse link
G TOMM20L translocase of outer mitochondrial membrane 20 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:58,395,904...58,417,080
Ensembl chr14:58,395,928...58,408,702
JBrowse link
tRNA re-export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPOT exportin for tRNA involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr12:64,404,392...64,451,125
Ensembl chr12:64,404,392...64,451,125
JBrowse link
tRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YBX1 Y-box binding protein 1 involved_in IMP (PMID:29073095) UniProt PMID:29073095 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18534
    localization 6635
      macromolecule localization 3203
        RNA localization 211
          RNA localization to chromatin 1
          RNA localization to nucleus + 19
          establishment of RNA localization + 172
          intracellular mRNA localization + 18
          maintenance of RNA location + 0
          mitochondrial RNA localization + 0
          pole plasm RNA localization + 0
          snoRNA localization 6
          telomerase RNA localization + 19
paths to the root