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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA localization
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Accession:GO:0006403 term browser browse the term
Definition:A process in which RNA is transported to, or maintained in, a specific location.
Synonyms:exact_synonym: RNA localisation;   establishment and maintenance of RNA localization

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show annotations for term's descendants           Sort by:
RNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:14614102 RGD:1299544 NCBI chr16:69,405,923...69,461,613
Ensembl chr16:69,406,549...69,459,175 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 acts_upstream_of_or_within ISO (PMID:20797886) MGI PMID:20797886 NCBI chr 2:211,482...259,590
Ensembl chr 2:211,604...259,447 		JBrowse link
G YY1 YY1 transcription factor acts_upstream_of_or_within ISO (PMID:21729784) MGI PMID:21729784 NCBI chr24:78,199,172...78,243,081
Ensembl chr24:78,199,039...78,237,165 		JBrowse link
dsRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLOT1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chr17:41,714,354...41,725,820
Ensembl chr17:41,714,402...41,725,397 		JBrowse link
G RFTN1 raftlin, lipid raft linker 1 acts_upstream_of_or_within ISO (PMID:21266579) MGI PMID:21266579 NCBI chr15:61,159,573...61,290,342
Ensembl chr15:61,159,930...61,289,965 		JBrowse link
G RFTN2 raftlin family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21266579) Ensembl
MGI		 PMID:21266579 GO_REF:0000107 NCBI chr10:83,082,681...83,168,828
Ensembl chr10:83,079,215...83,168,814 		JBrowse link
establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520 		JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chr15:48,048,785...48,173,120
Ensembl chr15:48,048,882...48,173,137 		JBrowse link
intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPRIN1 cell cycle associated protein 1 acts_upstream_of_or_within ISO (PMID:20861386) MGI PMID:20861386 NCBI chr 1:31,173,846...31,224,118
Ensembl chr 1:31,172,785...31,223,370 		JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12843282) Ensembl
MGI		 PMID:12843282 GO_REF:0000107 NCBI chr16:66,001,923...66,037,025
Ensembl chr16:66,000,434...66,037,093 		JBrowse link
G FUBP3 far upstream element binding protein 3 ISO RGD PMID:23121659 RGD:12792285 NCBI chr12:7,504,264...7,563,089
Ensembl chr12:7,504,295...7,563,040 		JBrowse link
G KIF5C kinesin family member 5C ISO RGD PMID:23121659 RGD:12792285 NCBI chr10:34,285,048...34,441,918
Ensembl chr10:34,285,037...34,444,863 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:37379838) UniProt PMID:37379838 NCBI chr13:91,045,167...91,206,190
Ensembl chr13:91,045,209...91,208,471 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12843282) MGI
TreeGrafter		 PMID:12843282 GO_REF:0000118 NCBI chr 2:14,804,750...14,879,067
Ensembl chr 2:14,804,791...14,878,838 		JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:69,025,827...69,360,760
Ensembl chr 8:69,025,436...69,322,539 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16286649) Ensembl
MGI		 PMID:16286649 GO_REF:0000107 NCBI chr11:50,483,974...50,507,178
Ensembl chr11:50,483,666...50,507,233 		JBrowse link
miRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:24356509) UniProt PMID:24356509 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711 		JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:27559612) UniProt PMID:27559612 NCBI chr20:90,229,927...90,250,213 JBrowse link
mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:17,221,643...17,249,038
Ensembl chr16:17,222,378...17,249,117 		JBrowse link
G ALYREF Aly/REF export factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:73,761,763...73,765,560
Ensembl chr16:73,757,072...73,765,531 		JBrowse link
G CHTOP chromatin target of PRMT1 involved_in ISO (PMID:23299939) UniProt PMID:23299939 NCBI chr20:10,159,463...10,170,949
Ensembl chr20:10,154,734...10,170,883 		JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:117,035,171...117,053,726
Ensembl chr 1:117,035,310...117,053,494 		JBrowse link
G DDX39A DExD-box helicase 39A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:13,054,803...13,065,154
Ensembl chr 6:13,052,105...13,065,153 		JBrowse link
G DDX39B DExD-box helicase 39B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,445,258...40,457,379
Ensembl chr17:40,447,061...40,456,826 		JBrowse link
G EIF4E eukaryotic translation initiation factor 4E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,002,522...47,053,060
Ensembl chr 7:47,001,008...47,051,571 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:104,044,671...104,054,272
Ensembl chr 8:104,044,634...104,056,953 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:122,635,383...122,674,298
Ensembl chr  X:122,635,439...122,674,355 		JBrowse link
G FYTTD1 forty-two-three domain containing 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:91,468,378...91,498,836
Ensembl chr15:91,469,033...91,500,059 		JBrowse link
G HHEX hematopoietically expressed homeobox involved_in ISO (PMID:12554669) BHF-UCL PMID:12554669 NCBI chr 9:85,957,684...85,963,414
Ensembl chr 9:85,957,779...85,963,404 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO PMID:9578590
(PMID:10567417)		 UniProt PMID:9578590 PMID:10567417 RGD:9685424 RGD:9685477 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G LOC103232394 nuclear RNA export factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:90,412,600...90,434,576 JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:89,852,450...89,900,002
Ensembl chr 2:89,852,447...89,890,054 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:41,736,063...41,776,178
Ensembl chr12:41,738,579...41,776,509 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:21326824) ComplexPortal PMID:21326824 NCBI chr15:90,306,640...90,314,293
Ensembl chr15:90,306,640...90,313,019 		JBrowse link
G NCBP3 nuclear cap binding subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:3,299,153...3,330,255
Ensembl chr16:3,299,500...3,330,243 		JBrowse link
G NUP107 nucleoporin 107 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:64,317,489...64,375,609
Ensembl chr11:64,317,521...64,375,398 		JBrowse link
G NUP133 nucleoporin 133 involved_in ISO (PMID:11684705) UniProt PMID:11684705 NCBI chr25:66,710,468...66,777,672 JBrowse link
G NUP155 nucleoporin 155 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19070573) Ensembl
MGI		 PMID:19070573 GO_REF:0000107 NCBI chr 4:36,167,078...36,243,040 JBrowse link
G NUP160 nucleoporin 160 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,468,783...17,540,963
Ensembl chr 1:17,469,576...17,541,117 		JBrowse link
G NUP214 nucleoporin 214 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8896451) Ensembl
MGI		 PMID:8896451 GO_REF:0000107 NCBI chr12:6,905,047...7,014,907
Ensembl chr12:6,903,096...7,014,887 		JBrowse link
G NUP85 nucleoporin 85 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:46,433,821...46,463,822
Ensembl chr16:46,433,579...46,463,759 		JBrowse link
G NUP88 nucleoporin 88 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:4,795,525...4,829,194
Ensembl chr16:4,792,569...4,829,127 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:11,096,289...11,111,186
Ensembl chr 1:11,096,323...11,111,632 		JBrowse link
G NXF3 nuclear RNA export factor 3 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr  X:90,997,859...91,054,806
Ensembl chr  X:90,997,653...91,011,235 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:52,357,189...52,361,222
Ensembl chr 2:52,360,491...52,360,913 		JBrowse link
G RBM15B RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,732,260...12,735,401
Ensembl chr22:12,732,396...12,735,068 		JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,702,975...51,768,435
Ensembl chr11:51,707,532...51,768,314 		JBrowse link
G SEM1 SEM1 26S proteasome complex subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr21:52,342,382...52,364,110
Ensembl chr21:52,342,397...52,364,103 		JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:28984244) UniProt PMID:28984244 NCBI chr17:35,535,900...35,544,852 JBrowse link
G THOC1 THO complex 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:59,624,623...59,676,133
Ensembl chr18:59,624,729...59,676,117 		JBrowse link
G THOC2 THO complex 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
G THOC3 THO complex 3 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr23:78,106,835...78,115,342
Ensembl chr23:78,106,635...78,115,269 		JBrowse link
G THOC5 THO complex subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:12,386,742...12,427,980
Ensembl chr19:12,385,431...12,427,090 		JBrowse link
G THOC6 THO complex subunit 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:2,767,338...2,771,040
Ensembl chr 5:2,767,634...2,771,812 		JBrowse link
G THOC7 THO complex subunit 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:24,866,856...24,896,827
Ensembl chr22:24,865,956...24,896,797 		JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474 		JBrowse link
G XPO1 exportin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,428,279...45,487,965
Ensembl chr14:45,432,619...45,488,723 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:633,158...670,000
Ensembl chr 7:633,172...671,030 		JBrowse link
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474 		JBrowse link
mRNA localization resulting in post-transcriptional regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1CF APOBEC1 complementation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20541607) Ensembl
MGI		 PMID:20541607 GO_REF:0000107 NCBI chr 9:80,286,872...80,367,587
Ensembl chr 9:80,314,081...80,370,348 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr 1:18,504,588...18,584,635
Ensembl chr 1:18,484,372...18,586,623 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16286649) Ensembl
TreeGrafter
MGI		 PMID:16286649 GO_REF:0000107 GO_REF:0000118 NCBI chr11:50,483,974...50,507,178
Ensembl chr11:50,483,666...50,507,233 		JBrowse link
mRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARC activity regulated cytoskeleton associated protein involved_in ISO PMID:29328916 UniProt PMID:29328916 RGD:13514080 NCBI chr 8:136,857,402...136,860,933
Ensembl chr 8:136,859,438...136,860,628 		JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr16:66,001,923...66,037,025
Ensembl chr16:66,000,434...66,037,093 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:12629046 RGD:9685156 NCBI chr29:3,005,891...3,106,732
Ensembl chr29:3,006,532...3,106,793 		JBrowse link
G EIF4E eukaryotic translation initiation factor 4E involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:47,002,522...47,053,060
Ensembl chr 7:47,001,008...47,051,571 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:104,044,671...104,054,272
Ensembl chr 8:104,044,634...104,056,953 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:122,635,383...122,674,298
Ensembl chr  X:122,635,439...122,674,355 		JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IEA UniProt GO_REF:0000043 NCBI chr12:9,595,379...9,631,193
Ensembl chr12:9,594,910...9,631,405 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:11886857 RGD:625404 NCBI chr10:62,772,741...62,780,695
Ensembl chr10:62,772,806...62,778,972 		JBrowse link
G HTT huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621 		JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:69,405,923...69,461,613
Ensembl chr16:69,406,549...69,459,175 		JBrowse link
G IGF2BP2 insulin like growth factor 2 mRNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:3,607,764...3,793,386
Ensembl chr15:3,607,849...3,791,631 		JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr21:34,846,383...34,999,579
Ensembl chr21:34,954,129...34,997,439 		JBrowse link
G KIF5C kinesin family member 5C involved_in ISO (MGI:4413400|PMID:19608740) UniProt PMID:19608740 MGI:4413400 NCBI chr10:34,285,048...34,441,918
Ensembl chr10:34,285,037...34,444,863 		JBrowse link
G LOC103232394 nuclear RNA export factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:90,412,600...90,434,576 JBrowse link
G LOC103235629 heterogeneous nuclear ribonucleoproteins A2/B1-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chr 7:9,610,008...9,611,665 JBrowse link
G LOC119625213 heterogeneous nuclear ribonucleoproteins A2/B1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118
G MAPT microtubule associated protein tau ISO RGD PMID:25847153 RGD:11061097 NCBI chr16:59,894,400...60,020,723
Ensembl chr16:59,890,221...59,955,612 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:41,736,063...41,776,178
Ensembl chr12:41,738,579...41,776,509 		JBrowse link
G NDC1 NDC1 transmembrane nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chr20:79,097,579...79,165,732
Ensembl chr20:79,098,843...79,165,814 		JBrowse link
G NUP107 nucleoporin 107 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:64,317,489...64,375,609
Ensembl chr11:64,317,521...64,375,398 		JBrowse link
G NUP188 nucleoporin 188 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:9,150,603...9,213,512
Ensembl chr12:9,151,005...9,208,452 		JBrowse link
G NUP35 nucleoporin 35 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr10:68,648,503...68,685,143
Ensembl chr10:68,648,151...68,685,379 		JBrowse link
G NUP50 nucleoporin 50 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:27,632,467...27,656,892
Ensembl chr19:27,632,545...27,653,563 		JBrowse link
G NUP58 nucleoporin 58 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:4,695,071...4,743,659
Ensembl chr 3:4,695,137...4,737,195 		JBrowse link
G NUP85 nucleoporin 85 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:46,433,821...46,463,822
Ensembl chr16:46,433,579...46,463,759 		JBrowse link
G NUP88 nucleoporin 88 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:4,795,525...4,829,194
Ensembl chr16:4,792,569...4,829,127 		JBrowse link
G NUP93 nucleoporin 93 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:42,679,764...42,794,103
Ensembl chr 5:42,679,781...42,794,097 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:62,924,514...63,050,060
Ensembl chr 1:62,925,050...63,050,111 		JBrowse link
G NUTF2 nuclear transport factor 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:59,567,429...59,592,725
Ensembl chr 5:59,566,171...59,592,843 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:11,096,289...11,111,186
Ensembl chr 1:11,096,323...11,111,632 		JBrowse link
G NXF3 nuclear RNA export factor 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:90,997,859...91,054,806
Ensembl chr  X:90,997,653...91,011,235 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:52,357,189...52,361,222
Ensembl chr 2:52,360,491...52,360,913 		JBrowse link
G PEG10 paternally expressed 10 involved_in ISO (MGI:6828898|PMID:34413232) UniProt PMID:34413232 MGI:6828898 NCBI chr21:54,371,708...54,384,874 JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:37379838) UniProt PMID:37379838 NCBI chr13:91,045,167...91,206,190
Ensembl chr13:91,045,209...91,208,471 		JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA UniProt GO_REF:0000043 NCBI chr20:12,819,891...12,821,656
Ensembl chr20:12,819,956...12,821,629 		JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr22:46,336,909...46,357,435
Ensembl chr22:46,336,829...46,355,723 		JBrowse link
G SLBP stem-loop histone mRNA binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr27:47,054,154...47,075,104
Ensembl chr27:47,054,787...47,074,537 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,011,073...34,013,665
Ensembl chr 6:34,011,031...34,013,870 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:17369404) UniProt PMID:17369404 NCBI chr24:46,000,222...46,005,455
Ensembl chr24:45,999,623...46,006,218 		JBrowse link
negative regulation of establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,608,830...68,647,220
Ensembl chr 8:68,608,844...68,648,171 		JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUP153 nucleoporin 153 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:54,426,383...54,518,986
Ensembl chr17:54,426,289...54,519,249 		JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474 		JBrowse link
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH12orf50 chromosome unknown C12orf50 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:83,354,053...83,402,189
Ensembl chr11:83,354,350...83,398,963 		JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:117,035,171...117,053,726
Ensembl chr 1:117,035,310...117,053,494 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:104,044,671...104,054,272
Ensembl chr 8:104,044,634...104,056,953 		JBrowse link
G GLE1 GLE1 RNA export mediator involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:9,595,379...9,631,193
Ensembl chr12:9,594,910...9,631,405 		JBrowse link
G HHEX hematopoietically expressed homeobox involved_in ISO (PMID:12554669) BHF-UCL PMID:12554669 NCBI chr 9:85,957,684...85,963,414
Ensembl chr 9:85,957,779...85,963,404 		JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:2,688,690...2,747,457
Ensembl chr10:2,689,031...2,734,828 		JBrowse link
G LOC103231469 polyadenylate-binding protein 2 involved_in ISO (PMID:19364924) UniProt PMID:19364924 NCBI chr29:23,692,252...23,697,882
Ensembl chr29:23,679,736...23,686,349
Ensembl chr29:23,679,736...23,686,349 		JBrowse link
G LOC103232394 nuclear RNA export factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:90,412,600...90,434,576 JBrowse link
G LOC103233154 ATP-dependent RNA helicase DDX19A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:53,498,746...53,522,981
Ensembl chr 5:53,498,862...53,521,566 		JBrowse link
G LOC103233156 ATP-dependent RNA helicase DDX19B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:53,438,552...53,480,623
Ensembl chr 5:53,443,037...53,481,987 		JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:89,852,450...89,900,002
Ensembl chr 2:89,852,447...89,890,054 		JBrowse link
G NUP93 nucleoporin 93 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:42,679,764...42,794,103
Ensembl chr 5:42,679,781...42,794,097 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15820316) Ensembl
TreeGrafter
MGI		 PMID:15820316 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:11,096,289...11,111,186
Ensembl chr 1:11,096,323...11,111,632 		JBrowse link
G NXF3 nuclear RNA export factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15820316) MGI
TreeGrafter		 PMID:15820316 GO_REF:0000118 NCBI chr  X:90,997,859...91,054,806
Ensembl chr  X:90,997,653...91,011,235 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:52,357,189...52,361,222
Ensembl chr 2:52,360,491...52,360,913 		JBrowse link
G NXT2 nuclear transport factor 2 like export factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:97,392,745...97,402,005
Ensembl chr  X:97,393,112...97,401,998 		JBrowse link
G PCID2 PCI domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:91,163,158...91,212,450
Ensembl chr 3:91,177,463...91,211,735 		JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:25,137,631...25,167,669
Ensembl chr19:25,137,008...25,167,859 		JBrowse link
G SARNP SAP domain containing ribonucleoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:51,702,975...51,768,435
Ensembl chr11:51,707,532...51,768,314 		JBrowse link
G THOC2 THO complex 2 involved_in ISO (PMID:22928037) UniProt PMID:22928037
G ZC3H11A zinc finger CCCH-type containing 11A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:25,490,837...25,548,262
Ensembl chr25:25,489,127...25,541,281 		JBrowse link
positive regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr15:36,387,242...36,438,133
Ensembl chr15:36,387,228...36,437,606 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,011,073...34,013,665
Ensembl chr 6:34,011,031...34,013,870 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:17369404) UniProt PMID:17369404 NCBI chr24:46,000,222...46,005,455
Ensembl chr24:45,999,623...46,006,218 		JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPSF6 cleavage and polyadenylation specific factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:64,859,701...64,894,144
Ensembl chr11:64,859,718...64,882,269 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:46,485,602...46,534,046
Ensembl chr25:46,485,427...46,518,406 		JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (PMID:21613532) UniProt PMID:21613532 NCBI chr20:100,831,307...100,859,609
Ensembl chr20:100,832,461...100,859,630 		JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:67,999,010...68,055,164
Ensembl chr24:67,999,268...68,055,093 		JBrowse link
positive regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr11:65,213,992...65,230,318
Ensembl chr11:65,214,060...65,230,379 		JBrowse link
G CCT3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr20:7,518,729...7,545,296
Ensembl chr20:7,518,846...7,545,677 		JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,086,932...45,106,922
Ensembl chr14:45,086,920...45,111,271 		JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:9,787,093...9,802,892
Ensembl chr 4:9,787,101...9,805,852 		JBrowse link
G CCT6A chaperonin containing TCP1 subunit 6A involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr21:2,715,990...2,728,397
Ensembl chr21:2,718,975...2,728,239 		JBrowse link
G CCT7 chaperonin containing TCP1 subunit 7 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr14:33,921,100...33,940,204
Ensembl chr14:33,921,247...33,939,404 		JBrowse link
G CCT8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:63,151,783...63,169,249
Ensembl chr 2:63,151,481...63,169,098 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:129,015,883...129,029,741
Ensembl chr  X:129,016,046...129,030,001 		JBrowse link
G NOP10 NOP10 ribonucleoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:48,563,535...48,566,409
Ensembl chr26:48,563,517...48,566,745 		JBrowse link
G TCP1 t-complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:87,377,452...87,388,692
Ensembl chr13:87,377,996...87,388,568 		JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPO5 exportin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,585,317...28,637,045
Ensembl chr17:28,585,536...28,635,519 		JBrowse link
regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chr23:79,891,942...79,903,289 JBrowse link
G HTT huntingtin ISO RGD PMID:20185826 RGD:10403027 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621 		JBrowse link
G PUM2 pumilio RNA binding family member 2 ISO RGD PMID:31606248 RGD:242905203 NCBI chr14:87,368,288...87,473,282
Ensembl chr14:87,391,219...87,474,676 		JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8L A-kinase anchoring protein 8 like involved_in ISO (PMID:11402034) UniProt PMID:11402034 NCBI chr 6:13,987,731...14,023,130
Ensembl chr 6:13,987,736...14,023,148 		JBrowse link
G ALKBH5 alkB homolog 5, RNA demethylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23177736) UniProt
Ensembl		 PMID:23177736 GO_REF:0000107 NCBI chr16:17,221,643...17,249,038
Ensembl chr16:17,222,378...17,249,117 		JBrowse link
G IWS1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISO (PMID:17234882) UniProt PMID:17234882 NCBI chr10:2,688,690...2,747,457
Ensembl chr10:2,689,031...2,734,828 		JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:6,279,984...6,312,737
Ensembl chr 4:6,280,001...6,312,569 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:19141475) UniProt PMID:19141475 NCBI chr22:8,421,178...8,567,221
Ensembl chr22:8,420,960...8,567,201 		JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,444,864...22,470,248 JBrowse link
G THOC2 THO complex 2 acts_upstream_of_or_within ISO (PMID:24315442) MGI PMID:24315442
G THOC5 THO complex subunit 5 acts_upstream_of_or_within ISO (PMID:24315442) MGI PMID:24315442 NCBI chr19:12,386,742...12,427,980
Ensembl chr19:12,385,431...12,427,090 		JBrowse link
G TPR translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474 		JBrowse link
G WNK1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:736,668...893,404
Ensembl chr11:737,590...890,762 		JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 acts_upstream_of_or_within ISO (PMID:12496368) MGI PMID:12496368 NCBI chr20:100,831,307...100,859,609
Ensembl chr20:100,832,461...100,859,630 		JBrowse link
regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:16,262,309...16,299,858
Ensembl chr23:16,262,334...16,296,985 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:129,015,883...129,029,741
Ensembl chr  X:129,016,046...129,030,001 		JBrowse link
G EXOSC10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,672,590...120,694,887
Ensembl chr20:120,672,645...120,710,775 		JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:13,891,362...14,089,576
Ensembl chr 5:13,891,369...14,089,518 		JBrowse link
RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor involved_in ISO (PMID:28418038) UniProt PMID:28418038 NCBI chr16:73,761,763...73,765,560
Ensembl chr16:73,757,072...73,765,531 		JBrowse link
G NPAP1 nuclear pore associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:57,306,094...57,311,033
Ensembl chr26:57,306,809...57,310,288 		JBrowse link
G NUP153 nucleoporin 153 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:54,426,383...54,518,986
Ensembl chr17:54,426,289...54,519,249 		JBrowse link
G NUP155 nucleoporin 155 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:36,167,078...36,243,040 JBrowse link
G NUP188 nucleoporin 188 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:9,150,603...9,213,512
Ensembl chr12:9,151,005...9,208,452 		JBrowse link
G NUP214 nucleoporin 214 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:6,905,047...7,014,907
Ensembl chr12:6,903,096...7,014,887 		JBrowse link
G NUP62 nucleoporin 62 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:43,063,483...43,086,264
Ensembl chr 6:43,064,875...43,066,440 		JBrowse link
G NUP62CL nucleoporin 62 C-terminal like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:94,952,017...95,033,089
Ensembl chr  X:94,951,636...94,998,052 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:62,924,514...63,050,060
Ensembl chr 1:62,925,050...63,050,111 		JBrowse link
G NXF1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11579093) Ensembl
MGI		 PMID:11579093 GO_REF:0000107 NCBI chr 1:11,096,289...11,111,186
Ensembl chr 1:11,096,323...11,111,632 		JBrowse link
G NXT1 nuclear transport factor 2 like export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11579093) Ensembl
MGI		 PMID:11579093 GO_REF:0000107 NCBI chr 2:52,357,189...52,361,222
Ensembl chr 2:52,360,491...52,360,913 		JBrowse link
G POM121C POM121 transmembrane nucleoporin C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:9,743,371...9,796,532 JBrowse link
G POM121L2 POM121 transmembrane nucleoporin like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:45,208,541...45,213,032
Ensembl chr17:45,209,508...45,212,612 		JBrowse link
G RAE1 ribonucleic acid export 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:6,744,984...6,772,870
Ensembl chr 2:6,744,982...6,772,736 		JBrowse link
G RBM33 RNA binding motif protein 33 involved_in ISO (PMID:35589130) UniProt PMID:35589130 NCBI chr21:123,776,993...123,906,866
Ensembl chr21:123,776,858...123,904,093 		JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474 		JBrowse link
G XPO5 exportin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:28,585,317...28,637,045
Ensembl chr17:28,585,536...28,635,519 		JBrowse link
RNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,211,385...51,267,706
Ensembl chr14:51,211,118...51,267,098 		JBrowse link
RNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNB1 karyopherin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,047,473...68,083,290
Ensembl chr16:68,047,491...68,084,778 		JBrowse link
G SNUPN snurportin 1 involved_in ISO (PMID:9670026) ComplexPortal PMID:9670026 NCBI chr26:7,806,698...7,835,477 JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474 		JBrowse link
RNA localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701 		JBrowse link
RNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:17004321) RGD
HGNC-UCL		 PMID:14523087 PMID:17004321 RGD:9685480 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G SIDT1 SID1 transmembrane family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:67,232,377...67,324,862
Ensembl chr22:67,230,564...67,324,784 		JBrowse link
G SIDT2 SID1 transmembrane family member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:108,550,091...108,568,470
Ensembl chr 1:108,549,792...108,569,172 		JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chr20:90,229,927...90,250,213 JBrowse link
rRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRPL18 mitochondrial ribosomal protein L18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:87,389,210...87,395,134
Ensembl chr13:87,389,702...87,394,866 		JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,211,385...51,267,706
Ensembl chr14:51,211,118...51,267,098 		JBrowse link
G TST thiosulfate sulfurtransferase involved_in ISO (PMID:20663881) UniProt PMID:20663881 NCBI chr19:19,716,295...19,724,712
Ensembl chr19:19,716,180...19,724,589 		JBrowse link
rRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TST thiosulfate sulfurtransferase involved_in ISO (PMID:21685364) UniProt PMID:21685364 NCBI chr19:19,716,295...19,724,712
Ensembl chr19:19,716,180...19,724,589 		JBrowse link
scaRNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 acts_upstream_of_positive_effect ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr11:65,213,992...65,230,318
Ensembl chr11:65,214,060...65,230,379 		JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr14:45,086,932...45,106,922
Ensembl chr14:45,086,920...45,111,271 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr  X:129,015,883...129,029,741
Ensembl chr  X:129,016,046...129,030,001 		JBrowse link
G TCP1 t-complex 1 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chr13:87,377,452...87,388,692
Ensembl chr13:87,377,996...87,388,568 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25467444)
(PMID:19285445)		 BHF-UCL
UniProt		 PMID:19285445 PMID:25467444 NCBI chr16:7,065,531...7,085,590
Ensembl chr16:7,066,333...7,085,625 		JBrowse link
snoRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBL fibrillarin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,370,558...34,382,909
Ensembl chr 6:34,370,558...34,376,836 		JBrowse link
G LOC103215917 zinc finger HIT domain-containing protein 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:51,480,808...51,482,132 JBrowse link
G LOC103217060 zinc finger HIT domain-containing protein 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:34,277,451...34,278,372 JBrowse link
G NOP58 NOP58 ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:87,989,687...88,026,774
Ensembl chr10:87,989,699...88,026,904 		JBrowse link
G PIH1D1 PIH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,627,125...42,633,467
Ensembl chr 6:42,627,097...42,632,932 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 NOT|involved_in ISO (PMID:17636026) UniProt PMID:17636026 NCBI chr 6:46,790,193...46,808,946
Ensembl chr 6:46,793,455...46,808,948 		JBrowse link
G ZNHIT3 zinc finger HIT-type containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:31,313,087...31,322,303 JBrowse link
G ZNHIT6 zinc finger HIT-type containing 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:47,666,100...47,720,015
Ensembl chr20:47,666,297...47,722,160 		JBrowse link
snRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCBP1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:26382858) ComplexPortal PMID:26382858 NCBI chr12:41,736,063...41,776,178
Ensembl chr12:41,738,579...41,776,509 		JBrowse link
G NCBP3 nuclear cap binding subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:3,299,153...3,330,255
Ensembl chr16:3,299,500...3,330,243 		JBrowse link
G PHAX phosphorylated adaptor for RNA export involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10786834) Ensembl
TreeGrafter
MGI
InterPro		 PMID:10786834 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr23:29,594,021...29,618,189
Ensembl chr23:29,594,165...29,619,830 		JBrowse link
snRNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103238155 snurportin-1-like involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr11:36,214,096...36,218,241 JBrowse link
G RAN RAN, member RAS oncogene family involved_in ISO (PMID:8636225) UniProt PMID:8636225 NCBI chr11:126,257,849...126,263,481 JBrowse link
G SNUPN snurportin 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr26:7,806,698...7,835,477 JBrowse link
telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAF1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 7:109,578,476...109,617,114
Ensembl chr 7:109,576,073...109,617,122 		JBrowse link
G NHP2 NHP2 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr23:79,842,690...79,847,138
Ensembl chr23:79,842,948...79,846,984 		JBrowse link
G NOP10 NOP10 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr26:48,563,535...48,566,409
Ensembl chr26:48,563,517...48,566,745 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr22:52,887,374...52,967,728
Ensembl chr22:52,924,819...52,967,830 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 6:42,227,982...42,247,204
Ensembl chr 6:42,227,821...42,249,707 		JBrowse link
G SHQ1 SHQ1, H/ACA ribonucleoprotein assembly factor acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr22:33,691,625...33,799,128
Ensembl chr22:33,691,120...33,795,450 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr16:7,065,531...7,085,590
Ensembl chr16:7,066,333...7,085,625 		JBrowse link
tRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOL6 nucleolar protein 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:46,791,704...46,804,091
Ensembl chr12:46,791,725...46,805,338 		JBrowse link
G SSB small RNA binding exonuclease protection factor La involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:55,325,975...55,339,317
Ensembl chr10:55,262,897...55,339,008 		JBrowse link
G XPOT exportin for tRNA involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,087,492...60,132,383
Ensembl chr11:60,092,482...60,131,948 		JBrowse link
tRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103231257 mitochondrial import receptor subunit TOM20 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:17,038,698...17,039,174 JBrowse link
G TOMM20 translocase of outer mitochondrial membrane 20 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:72,286,666...72,304,129 JBrowse link
G TOMM20 translocase of outer mitochondrial membrane 20 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr25:72,295,301...72,304,170 JBrowse link
G TOMM20L translocase of outer mitochondrial membrane 20 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:35,578,996...35,591,613
Ensembl chr24:35,579,540...35,591,495 		JBrowse link
tRNA re-export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPOT exportin for tRNA involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr11:60,087,492...60,132,383
Ensembl chr11:60,092,482...60,131,948 		JBrowse link
tRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chr20:90,229,927...90,250,213 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17079
    localization 5433
      macromolecule localization 3021
        RNA localization 160
          RNA localization to chromatin 1
          RNA localization to nucleus + 19
          establishment of RNA localization + 120
          intracellular mRNA localization + 16
          maintenance of RNA location + 0
          mitochondrial RNA localization + 0
          pole plasm RNA localization + 0
          snoRNA localization 8
          telomerase RNA localization + 19
paths to the root