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ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA metabolic process
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Accession:GO:0006399 term browser browse the term
Definition:The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established.
Synonyms:exact_synonym: tRNA metabolism


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tRNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtd1 D-aminoacyl-tRNA deacylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:131,995,870...132,158,646
Ensembl chr 3:131,995,861...132,158,659 		JBrowse link
G Dtd2 D-aminoacyl-tRNA deacylase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:69,450,146...69,456,430
Ensembl chr 6:69,449,614...69,456,427 		JBrowse link
G Mettl2 methyltransferase like 2 involved_in ISO (PMID:28655767) RGD PMID:28655767 NCBI chr10:90,095,527...90,109,354
Ensembl chr10:90,095,527...90,119,528 		JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA		 MGI:3618596 (PMID:16906134)
GO_REF:0000033
(PMID:27622773), (PMID:28493438), (PMID:33909043)
(MGI:5905209|PMID:27622773)		 RGD
GO_Central		 PMID:16906134 PMID:27622773 PMID:28493438 PMID:33909043 PMID:2040280 GO_REF:0000033 MGI:5905209, RGD:2302982 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147 		JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090 		JBrowse link
G Aarsd1 alanyl-tRNA synthetase domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:86,340,625...86,353,732
Ensembl chr10:86,340,626...86,353,729 		JBrowse link
aminoacyl-tRNA metabolism involved in translational fidelity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147 		JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090 		JBrowse link
G Aarsd1 alanyl-tRNA synthetase domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:86,340,625...86,353,732
Ensembl chr10:86,340,626...86,353,729 		JBrowse link
G Dtd1 D-aminoacyl-tRNA deacylase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:131,995,870...132,158,646
Ensembl chr 3:131,995,861...132,158,659 		JBrowse link
G Dtd2 D-aminoacyl-tRNA deacylase 2 involved_in ISO (PMID:29410408)
(MGI:6148359|PMID:29410408)		 RGD PMID:29410408 MGI:6148359 NCBI chr 6:69,450,146...69,456,430
Ensembl chr 6:69,449,614...69,456,427 		JBrowse link
G Iars1 isoleucyl-tRNA synthetase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:14,940,919...14,987,277
Ensembl chr17:14,940,924...14,987,237 		JBrowse link
G Iars2 isoleucyl-tRNA synthetase 2, mitochondrial involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:96,831,484...96,865,518
Ensembl chr13:96,831,484...96,865,501 		JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931 		JBrowse link
G Lars2 leucyl-tRNA synthetase 2, mitochondrial involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:123,010,271...123,106,395
Ensembl chr 8:123,010,293...123,106,395 		JBrowse link
G Prorsd1 prolyl-tRNA synthetase associated domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:103,257,979...103,260,248
Ensembl chr14:103,257,979...103,260,248 		JBrowse link
G Tars2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:183,293,095...183,310,210
Ensembl chr 2:183,293,097...183,310,184 		JBrowse link
G Vars1 valyl-tRNA synthetase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:3,805,774...3,820,468
Ensembl chr20:3,805,776...3,820,298 		JBrowse link
G Vars2 valyl-tRNA synthetase 2, mitochondrial involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:3,077,132...3,087,994
Ensembl chr20:3,077,132...3,087,994 		JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dalrd3 DALR anticodon binding domain containing 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,264,100...109,268,560
Ensembl chr 8:109,265,676...109,268,568 		JBrowse link
G Rars1 arginyl-tRNA synthetase 1 involved_in IDA
IBA
ISO		 GO_REF:0000033
(MGI:3055639|PMID:12060739)
(PMID:25288775)		 GO_Central
RGD		 PMID:12060739 PMID:25288775 PMID:7082655 GO_REF:0000033 MGI:3055639, RGD:2303394 NCBI chr10:20,270,744...20,295,192
Ensembl chr10:20,270,483...20,295,196 		JBrowse link
G Rars2 arginyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:49,181,517...49,238,664
Ensembl chr 5:49,181,565...49,233,276 		JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nars1 asparaginyl-tRNA synthetase 1 involved_in ISO
IBA		 (PMID:9421509)
GO_REF:0000033		 RGD
GO_Central		 PMID:9421509 GO_REF:0000033 NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622 		JBrowse link
G Nars2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:151,300,446...151,412,086
Ensembl chr 1:151,300,467...151,413,521 		JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars1 aspartyl-tRNA synthetase 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:39,857,936...39,913,055
Ensembl chr13:39,857,936...39,913,116 		JBrowse link
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:73,308,726...73,336,558
Ensembl chr13:73,308,726...73,336,934 		JBrowse link
conversion of methionyl-tRNA to N-formyl-methionyl-tRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtfmt mitochondrial methionyl-tRNA formyltransferase involved_in ISO
IBA
IEA
ISS		 (PMID:25288793)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:25288793 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841 		JBrowse link
conversion of seryl-tRNAsec to selenocys-tRNAsec term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:58,311,484...58,341,745
Ensembl chr14:58,311,499...58,341,740 		JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cars1 cysteinyl-tRNA synthetase 1 involved_in ISO
IBA		 (PMID:10908348), (PMID:17303165)
GO_REF:0000033
(PMID:11347887)		 RGD
GO_Central		 PMID:10908348 PMID:11347887 PMID:17303165 GO_REF:0000033 NCBI chr 1:198,753,689...198,796,016
Ensembl chr 1:198,753,691...198,795,941 		JBrowse link
G Cars2 cysteinyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA		 (PMID:29079736)
GO_REF:0000033		 RGD
GO_Central		 PMID:29079736 GO_REF:0000033 NCBI chr16:77,945,468...77,987,163
Ensembl chr16:77,950,008...77,987,772 		JBrowse link
glutaminyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO (PMID:26869582) RGD PMID:26869582 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931 		JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO
IBA
IEA
ISS		 (PMID:24656866), (PMID:26869582)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
Ensembl
InterPro
UniProt		 PMID:24656866 PMID:26869582 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:109,207,705...109,215,738
Ensembl chr 8:109,207,705...109,215,739 		JBrowse link
glutaminyl-tRNAGln biosynthesis via transamidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatb glutamyl-tRNA amidotransferase subunit B involved_in ISO
IBA		 (PMID:19805282)
GO_REF:0000033		 RGD
GO_Central		 PMID:19805282 GO_REF:0000033 NCBI chr 2:170,930,547...171,017,133
Ensembl chr 2:170,930,542...171,016,695 		JBrowse link
G Gatc glutamyl-tRNA amidotransferase subunit C involved_in IEA
IBA
ISO		 GO_REF:0000104
GO_REF:0000033
(PMID:19805282)		 UniProt
GO_Central
RGD		 PMID:19805282 GO_REF:0000033 GO_REF:0000104 NCBI chr12:41,270,096...41,278,067
Ensembl chr12:41,270,087...41,277,995 		JBrowse link
G Qrsl1 glutaminyl-tRNA amidotransferase subunit QRSL1 involved_in ISO
IBA
IEA		 (PMID:19805282)
GO_REF:0000033
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:19805282 GO_REF:0000033 GO_REF:0000104 NCBI chr20:47,357,206...47,382,160
Ensembl chr20:47,357,216...47,382,135 		JBrowse link
glutamyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA		 (PMID:19805282)
GO_REF:0000033		 RGD
GO_Central		 PMID:19805282 GO_REF:0000033 NCBI chr 1:176,597,986...176,625,848
Ensembl chr 1:176,597,986...176,625,836 		JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO (PMID:3290852) RGD PMID:3290852 NCBI chr13:96,901,548...96,971,966
Ensembl chr13:96,901,575...96,971,966 		JBrowse link
glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3760297 (PMID:19470612)
GO_REF:0000107		 RGD
Ensembl		 PMID:19470612 GO_REF:0000107 NCBI chr 4:84,171,596...84,212,609
Ensembl chr 4:84,171,596...84,212,609 		JBrowse link
histidyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hars1 histidyl-tRNA synthetase 1 involved_in ISO
IBA		 (PMID:29235198)
GO_REF:0000033		 RGD
GO_Central		 PMID:29235198 GO_REF:0000033 NCBI chr18:28,381,649...28,398,699
Ensembl chr18:28,381,655...28,398,740 		JBrowse link
G Hars2 histidyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA		 (PMID:21464306)
GO_REF:0000033		 RGD
GO_Central		 PMID:21464306 GO_REF:0000033 NCBI chr18:28,398,790...28,408,075
Ensembl chr18:28,398,795...28,414,747 		JBrowse link
G Zmat2 zinc finger, matrin type 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,409,606...28,414,241
Ensembl chr18:28,398,795...28,414,747 		JBrowse link
isoleucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iars1 isoleucyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:8052601)
GO_REF:0000033
(MGI:3055639|PMID:12060739)		 RGD
GO_Central		 PMID:8052601 PMID:12060739 GO_REF:0000033 MGI:3055639 NCBI chr17:14,940,919...14,987,277
Ensembl chr17:14,940,924...14,987,237 		JBrowse link
G Iars2 isoleucyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:96,831,484...96,865,518
Ensembl chr13:96,831,484...96,865,501 		JBrowse link
leucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO
IBA		 (MGI:3055639|PMID:12060739)
GO_REF:0000033
(PMID:25051973)		 RGD
GO_Central		 PMID:12060739 PMID:25051973 GO_REF:0000033 MGI:3055639 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931 		JBrowse link
G Lars2 leucyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA		 (PMID:10684970)
GO_REF:0000033		 RGD
GO_Central		 PMID:10684970 GO_REF:0000033 NCBI chr 8:123,010,271...123,106,395
Ensembl chr 8:123,010,293...123,106,395 		JBrowse link
lysyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kars1 lysyl-tRNA synthetase 1 involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
(PMID:10952987), (PMID:23159739), (PMID:9278442)
PMID:6315704		 GO_Central
InterPro
RGD		 PMID:9278442 PMID:10952987 PMID:23159739 PMID:7372681 PMID:6315704 More... GO_REF:0000002 GO_REF:0000033, RGD:2303393, RGD:12911009, RGD:2303394 NCBI chr19:39,957,846...39,976,837
Ensembl chr19:39,957,846...39,977,632 		JBrowse link
methionyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mars1 methionyl-tRNA synthetase 1 involved_in ISO
IBA		 (MGI:3055639|PMID:12060739)
GO_REF:0000033
(PMID:11714285), (PMID:33909043)		 RGD
GO_Central		 PMID:11714285 PMID:12060739 PMID:33909043 GO_REF:0000033 MGI:3055639 NCBI chr 7:63,121,142...63,138,550
Ensembl chr 7:63,121,142...63,138,495 		JBrowse link
G Mars2 methionyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA		 (PMID:15274629)
GO_REF:0000033		 RGD
GO_Central		 PMID:15274629 GO_REF:0000033 NCBI chr 9:56,720,408...56,729,991
Ensembl chr 9:56,720,983...56,723,820 		JBrowse link
mitochondrial alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars2 alanyl-tRNA synthetase 2, mitochondrial involved_in ISO
IEA		 (PMID:21549344)
GO_REF:0000107		 RGD
Ensembl		 PMID:21549344 GO_REF:0000107 NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090 		JBrowse link
mitochondrial asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) involved_in ISS
ISO		 GO_REF:0000024
(PMID:23275545)		 UniProt
RGD		 PMID:23275545 GO_REF:0000024 NCBI chr13:73,308,726...73,336,558
Ensembl chr13:73,308,726...73,336,934 		JBrowse link
mitochondrial glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:84,171,596...84,212,609
Ensembl chr 4:84,171,596...84,212,609 		JBrowse link
mitochondrial seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sars2 seryl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:84,028,972...84,040,725
Ensembl chr 1:84,028,986...84,040,725 		JBrowse link
mitochondrial tRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elac2 elaC ribonuclease Z 2 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:21593607)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:21593607 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:49,632,308...49,655,614
Ensembl chr10:49,632,378...49,655,614 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:29040705)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:29040705 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,142...21,091,603
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in ISO (PMID:29040705) RGD PMID:29040705 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568 		JBrowse link
G Trnt1 tRNA nucleotidyl transferase 1 involved_in ISO
IBA		 (PMID:11504732)
GO_REF:0000033		 RGD
GO_Central		 PMID:11504732 GO_REF:0000033 NCBI chr 4:139,681,115...139,703,611
Ensembl chr 4:139,680,858...139,703,611 		JBrowse link
mitochondrial tRNA 5'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24549042), (PMID:25925575), (PMID:28888424), (PMID:29040705), (PMID:29880640)		 UniProt
Ensembl
RGD		 PMID:24549042 PMID:25925575 PMID:28888424 PMID:29040705 PMID:29880640 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,142...21,091,603
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Prorp protein only RNase P catalytic subunit involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:25953853), (PMID:29880640)		 UniProt
GO_Central
RGD		 PMID:25953853 PMID:29880640 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:72,669,659...72,762,419
Ensembl chr 6:72,670,847...72,762,416 		JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:29040705), (PMID:29880640)		 UniProt
GO_Central
RGD		 PMID:29040705 PMID:29880640 GO_REF:0000024 GO_REF:0000033 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568 		JBrowse link
mitochondrial tRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23042678), (PMID:25925575), (PMID:28888424)		 UniProt
Ensembl
RGD		 PMID:23042678 PMID:25925575 PMID:28888424 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,142...21,091,603
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in ISO (PMID:23042678) RGD PMID:23042678 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568 		JBrowse link
G Trmt5 tRNA methyltransferase 5 involved_in ISO
IBA		 (PMID:26189817)
GO_REF:0000033		 RGD
GO_Central		 PMID:26189817 GO_REF:0000033 NCBI chr 6:91,963,558...91,987,660
Ensembl chr 6:91,943,724...91,987,555 		JBrowse link
mitochondrial tRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 acts_upstream_of_or_within ISO MGI:5750452 (PMID:25738458) RGD PMID:25738458 NCBI chr 3:142,838,081...142,872,669
Ensembl chr 3:142,708,028...142,872,677 		JBrowse link
G Mettl8 methyltransferase 8, tRNA N3-cytidine involved_in ISO (PMID:34774131) RGD PMID:34774131 NCBI chr 3:55,731,453...55,863,652
Ensembl chr 3:55,770,167...55,863,676 		JBrowse link
G Trit1 tRNA isopentenyltransferase 1 involved_in ISO (PMID:34774131)
(PMID:24901367)		 RGD PMID:24901367 PMID:34774131 NCBI chr 5:135,293,472...135,341,522
Ensembl chr 5:135,295,330...135,338,764 		JBrowse link
mitochondrial tRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in ISO
ISS		 (PMID:27132592)
GO_REF:0000024		 RGD
UniProt		 PMID:27132592 GO_REF:0000024 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568 		JBrowse link
mitochondrial tRNA pseudouridine synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpusd4 RNA pseudouridine synthase D4 involved_in ISO (PMID:28082677) RGD PMID:28082677 NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873 		JBrowse link
mitochondrial tRNA wobble uridine modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mto1 mitochondrial tRNA translation optimization 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
SGD:S000003205 (PMID:14522080)		 GO_Central
RGD		 PMID:14522080 GO_REF:0000033 NCBI chr 8:79,309,681...79,335,231
Ensembl chr 8:79,309,982...79,335,231 		JBrowse link
mitochondrial tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:186,459,744...186,543,581
Ensembl chr 2:186,459,444...186,543,571 		JBrowse link
mitochondrial tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Yars2 tyrosyl-tRNA synthetase 2 involved_in ISO
IEA		 (PMID:20598274)
GO_REF:0000107		 RGD
Ensembl		 PMID:20598274 GO_REF:0000107 NCBI chr11:84,632,350...84,638,138
Ensembl chr11:84,624,369...84,638,125 		JBrowse link
phenylalanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:10329163)		 UniProt
GO_Central
InterPro
RGD		 PMID:10329163 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr17:28,319,215...28,746,217
Ensembl chr17:28,319,280...28,746,337 		JBrowse link
G Farsa phenylalanyl-tRNA synthetase subunit alpha involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:20223217)		 UniProt
GO_Central
Ensembl
InterPro
RGD		 PMID:20223217 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:23,291,409...23,300,985
Ensembl chr19:23,268,869...23,300,980 		JBrowse link
G Farsb phenylalanyl-tRNA synthetase subunit beta involved_in ISO
IBA		 (PMID:20223217)
GO_REF:0000033		 RGD
GO_Central		 PMID:20223217 GO_REF:0000033 NCBI chr 9:79,887,852...79,947,082
Ensembl chr 9:79,887,842...79,947,045 		JBrowse link
G Lrrc47 leucine rich repeat containing 47 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:164,570,539...164,580,174
Ensembl chr 5:164,570,435...164,580,174 		JBrowse link
G Syce2 synaptonemal complex central element protein 2 involved_in IEA GO_REF:0000002
GO_REF:0000107		 InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:23,266,236...23,291,265
Ensembl chr19:23,268,869...23,300,980 		JBrowse link
prolyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO
IBA		 (PMID:24100331)
GO_REF:0000033
(MGI:3055639|PMID:12060739)		 RGD
GO_Central		 PMID:12060739 PMID:24100331 GO_REF:0000033 MGI:3055639 NCBI chr13:96,901,548...96,971,966
Ensembl chr13:96,901,575...96,971,966 		JBrowse link
G Pars2 prolyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:121,433,993...121,439,158
Ensembl chr 5:121,434,096...121,439,154 		JBrowse link
regulation of translational initiation by tRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:27745969)
(MGI:6316585|PMID:27745969)		 RGD PMID:27745969 MGI:6316585 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
regulation of tRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:15861136)
GO_REF:0000107		 RGD
Ensembl		 PMID:15861136 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sars1 seryl-tRNA synthetase 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033
(PMID:24095058), (PMID:28236339), (PMID:34570399), (PMID:36041817)		 UniProt
InterPro
Ensembl
GO_Central
RGD		 PMID:24095058 PMID:28236339 PMID:34570399 PMID:36041817 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:196,065,543...196,081,240
Ensembl chr 2:196,065,430...196,081,277 		JBrowse link
threonyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tars1 threonyl-tRNA synthetase 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(MGI:3055639|PMID:12060739), (MGI:6164765|PMID:29579307)
(PMID:25824639)		 UniProt
GO_Central
InterPro
Ensembl
RGD		 PMID:12060739 PMID:25824639 PMID:29579307 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:3055639 MGI:6164765 NCBI chr 2:60,368,893...60,387,715
Ensembl chr 2:60,367,796...60,387,717 		JBrowse link
G Tars2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:183,293,095...183,310,210
Ensembl chr 2:183,293,097...183,310,184 		JBrowse link
G Tars3 threonyl-tRNA synthetase 3 involved_in ISO (MGI:6164765|PMID:29579307) RGD PMID:29579307 MGI:6164765 NCBI chr 1:119,213,189...119,265,492
Ensembl chr 1:119,213,213...119,265,488 		JBrowse link
TRAMP-dependent tRNA surveillance pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Exosc2 exosome component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575 		JBrowse link
G Exosc3 exosome component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc7 exosome component 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270 		JBrowse link
G Exosc8 exosome component 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928 		JBrowse link
G Exosc9 exosome component 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051 		JBrowse link
G Zcchc7 zinc finger CCHC-type containing 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:58,992,558...59,173,308
Ensembl chr 5:58,993,290...59,173,300 		JBrowse link
tRNA (guanine-N7)-methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl1 methyltransferase 1, tRNA methylguanosine involved_in ISO (PMID:36599982), (PMID:36599985), (PMID:37369656) RGD PMID:36599982 PMID:36599985 PMID:37369656 NCBI chr 7:62,864,860...62,869,202
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Wdr4 WD repeat domain 4 involved_in ISO (PMID:36599982), (PMID:36599985), (PMID:37369656) RGD PMID:36599982 PMID:36599985 PMID:37369656 NCBI chr20:9,587,205...9,611,434
Ensembl chr20:9,587,207...9,603,581 		JBrowse link
tRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elac1 elaC ribonuclease Z 1 involved_in ISO (PMID:32075755) RGD PMID:32075755 NCBI chr18:67,321,231...67,341,358
Ensembl chr18:67,323,583...67,340,936 		JBrowse link
G Elac2 elaC ribonuclease Z 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:49,632,308...49,655,614
Ensembl chr10:49,632,378...49,655,614 		JBrowse link
G Ptcd1 pentatricopeptide repeat domain 1 involved_in ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr12:9,445,656...9,463,434
Ensembl chr12:9,445,714...9,463,508 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in ISO UniProtKB:P87058 (PMID:10983981) RGD PMID:10983981 NCBI chr 3:54,616,616...54,626,203
Ensembl chr 3:54,616,619...54,626,203 		JBrowse link
tRNA 3'-terminal CCA addition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911093 CCA tRNA nucleotidyltransferase 1, mitochondrial-like involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:170,720,730...170,722,745
Ensembl chr 1:170,721,272...170,722,576 		JBrowse link
G Trnt1 tRNA nucleotidyl transferase 1 involved_in ISO
IBA		 (PMID:25193871), (PMID:25652405), (PMID:29454993), (PMID:30959222), (PMID:31011209), (PMID:32075755), (PMID:34023389)
GO_REF:0000033		 RGD
GO_Central		 PMID:25193871 PMID:25652405 PMID:29454993 PMID:30959222 PMID:31011209 More... GO_REF:0000033 NCBI chr 4:139,681,115...139,703,611
Ensembl chr 4:139,680,858...139,703,611 		JBrowse link
tRNA 5'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thg1l tRNA-histidine guanylyltransferase 1-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,387,929...30,396,579
Ensembl chr10:30,387,940...30,396,687 		JBrowse link
tRNA 5'-leader removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pop1 POP1 homolog, ribonuclease P/MRP subunit involved_in ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141 		JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit involved_in ISO
IEA
ISS		 (PMID:16723659), (PMID:30454648)
GO_REF:0000002
GO_REF:0000024		 RGD
InterPro
UniProt		 PMID:16723659 PMID:30454648 GO_REF:0000002 GO_REF:0000024 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443 		JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit involved_in ISO
IBA		 (PMID:16723659), (PMID:30454648)
GO_REF:0000033		 RGD
GO_Central		 PMID:16723659 PMID:30454648 GO_REF:0000033 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336 		JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit involved_in ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674 		JBrowse link
G Prorp protein only RNase P catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:72,669,659...72,762,419
Ensembl chr 6:72,670,847...72,762,416 		JBrowse link
G Rpp14 ribonuclease P/MRP subunit p14 involved_in ISO
IBA		 (PMID:16723659), (PMID:30454648)
GO_REF:0000033		 RGD
GO_Central		 PMID:16723659 PMID:30454648 GO_REF:0000033 NCBI chr15:16,837,796...16,847,970
Ensembl chr15:16,836,859...16,852,101
Ensembl chr15:16,836,859...16,852,101 		JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 involved_in ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106 		JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:16723659), (PMID:30454648)		 UniProt
GO_Central
RGD		 PMID:16723659 PMID:30454648 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732 		JBrowse link
G Rpp25l ribonuclease P/MRP subunit p25 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,878,420...56,879,956
Ensembl chr 5:56,876,316...56,880,013 		JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 involved_in ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952 		JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 involved_in ISO
IBA		 (PMID:30454648)
GO_REF:0000033		 RGD
GO_Central		 PMID:30454648 GO_REF:0000033 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431 		JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 involved_in ISO
IBA
IEA
ISS		 (PMID:30454648)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
Ensembl
InterPro
UniProt		 PMID:30454648 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:28,947,752...28,956,788
Ensembl chr17:28,947,734...28,956,788 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in ISO UniProtKB:P87058 (PMID:10983981) RGD PMID:10983981 NCBI chr 3:54,616,616...54,626,203
Ensembl chr 3:54,616,619...54,626,203 		JBrowse link
tRNA acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nat10 N-acetyltransferase 10 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:90,111,643...90,149,891
Ensembl chr 3:90,111,645...90,149,927 		JBrowse link
tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) involved_in ISO (PMID:15779907), (PMID:17384640) RGD PMID:15779907 PMID:17384640 NCBI chr13:73,308,726...73,336,558
Ensembl chr13:73,308,726...73,336,934 		JBrowse link
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:28,319,215...28,746,217
Ensembl chr17:28,319,280...28,746,337 		JBrowse link
G Yars2 tyrosyl-tRNA synthetase 2 involved_in ISO
IBA		 (PMID:15779907), (PMID:15840810), (PMID:17997975)
GO_REF:0000033		 RGD
GO_Central		 PMID:15779907 PMID:15840810 PMID:17997975 GO_REF:0000033 NCBI chr11:84,632,350...84,638,138
Ensembl chr11:84,624,369...84,638,125 		JBrowse link
tRNA aminoacylation for mitochondrial protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial involved_in ISO (PMID:19805282) RGD PMID:19805282 NCBI chr 1:176,597,986...176,625,848
Ensembl chr 1:176,597,986...176,625,836 		JBrowse link
tRNA aminoacylation for protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:73,308,726...73,336,558
Ensembl chr13:73,308,726...73,336,934 		JBrowse link
G ENSRNOG00000064147 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr15:54,413,775...54,415,497 JBrowse link
G ENSRNOG00000067512 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:232,504,645...232,506,619 JBrowse link
G Gars1 glycyl-tRNA synthetase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28675565)		 UniProt
RGD		 PMID:28675565 GO_REF:0000024 NCBI chr 4:84,171,596...84,212,609
Ensembl chr 4:84,171,596...84,212,609 		JBrowse link
tRNA C3-cytosine methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dalrd3 DALR anticodon binding domain containing 3 involved_in ISO
IBA		 (PMID:32427860)
GO_REF:0000033		 RGD
GO_Central		 PMID:32427860 GO_REF:0000033 NCBI chr 8:109,264,100...109,268,560
Ensembl chr 8:109,265,676...109,268,568 		JBrowse link
G Mettl8 methyltransferase 8, tRNA N3-cytidine involved_in ISO (PMID:34774131), (PMID:35017528) RGD PMID:34774131 PMID:35017528 NCBI chr 3:55,731,453...55,863,652
Ensembl chr 3:55,770,167...55,863,676 		JBrowse link
tRNA C5-cytosine methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun6 NOP2/Sun RNA methyltransferase 6 involved_in ISO (PMID:26160102) RGD PMID:26160102 NCBI chr17:77,912,374...77,955,694
Ensembl chr17:77,912,377...77,950,006 		JBrowse link
tRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pop1 POP1 homolog, ribonuclease P/MRP subunit involved_in ISO (PMID:8918471) RGD PMID:8918471 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141 		JBrowse link
G Slfn9 schlafen family member 9 involved_in IDA PMID:29563550 UniProt PMID:29563550 RGD:13601999 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383 		JBrowse link
tRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin involved_in ISO (MGI:6713610|PMID:33986151) RGD PMID:33986151 MGI:6713610 NCBI chr15:24,312,711...24,323,361 JBrowse link
tRNA dihydrouridine synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dus1l dihydrouridine synthase 1-like involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000117
(PMID:34798057)		 UniProt
RGD		 PMID:34798057 GO_REF:0000024 GO_REF:0000117 NCBI chr10:106,055,519...106,062,656
Ensembl chr10:106,055,519...106,062,781 		JBrowse link
G Dus2 dihydrouridine synthase 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:26429968), (PMID:34798057), (PMID:38680565)		 GO_Central
RGD		 PMID:26429968 PMID:34798057 PMID:38680565 GO_REF:0000033 NCBI chr19:33,906,517...33,954,922
Ensembl chr19:33,911,750...33,954,709 		JBrowse link
G Dus3l dihydrouridine synthase 3-like involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000117
(PMID:34556860), (PMID:34798057)		 UniProt
RGD		 PMID:34556860 PMID:34798057 GO_REF:0000024 GO_REF:0000117 NCBI chr 9:1,593,491...1,598,663
Ensembl chr 9:1,594,123...1,598,655 		JBrowse link
G Dus4l dihydrouridine synthase 4-like involved_in ISO (PMID:34798057) RGD PMID:34798057 NCBI chr 6:48,228,111...48,242,553
Ensembl chr 6:48,228,111...48,242,449 		JBrowse link
tRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh8 alkB homolog 8, tRNA methyltransferase involved_in ISO
IBA		 (PMID:20308323), (PMID:31079898)
GO_REF:0000033
(MGI:4461096|PMID:20123966)		 RGD
GO_Central		 PMID:20123966 PMID:20308323 PMID:31079898 GO_REF:0000033 MGI:4461096 NCBI chr 6:378,779...449,382
Ensembl chr 6:378,100...452,165 		JBrowse link
G Bcdin3d BCDIN3 domain containing RNA methyltransferase involved_in ISO
ISS		 (PMID:28119416), (PMID:31919512)
GO_REF:0000024		 RGD
UniProt		 PMID:28119416 PMID:31919512 GO_REF:0000024 NCBI chr 7:130,605,540...130,610,134
Ensembl chr 7:130,605,541...130,610,115 		JBrowse link
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 involved_in ISO
IBA		 UniProtKB:P38238 (PMID:25404562), (PMID:36720500)
GO_REF:0000033		 RGD
GO_Central		 PMID:25404562 PMID:36720500 GO_REF:0000033 NCBI chr  X:14,243,684...14,256,555
Ensembl chr  X:14,244,050...14,252,030 		JBrowse link
G Gtpbp3 GTP binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,175,766...18,180,857
Ensembl chr16:18,175,766...18,180,857 		JBrowse link
G Lcmt2 leucine carboxyl methyltransferase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,099,960...108,102,084
Ensembl chr 3:108,099,961...108,102,084 		JBrowse link
G Mettl1 methyltransferase 1, tRNA methylguanosine involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:62,864,860...62,869,202
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Mettl2 methyltransferase like 2 involved_in ISO MGI:5903740 (PMID:28655767)
(PMID:34268557)		 RGD PMID:28655767 PMID:34268557 NCBI chr10:90,095,527...90,109,354
Ensembl chr10:90,095,527...90,119,528 		JBrowse link
G Mettl6 methyltransferase 6, tRNA N3-cytidine involved_in ISO (PMID:32923617), (PMID:34268557), (PMID:34862464), (PMID:34922197)
MGI:5903741 (PMID:28655767)		 RGD PMID:28655767 PMID:32923617 PMID:34268557 PMID:34862464 PMID:34922197 NCBI chr16:6,683,820...6,699,013
Ensembl chr16:6,583,465...6,698,975 		JBrowse link
G Mto1 mitochondrial tRNA translation optimization 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:79,309,681...79,335,231
Ensembl chr 8:79,309,982...79,335,231 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO
IBA		 (PMID:17071714), (PMID:31287866)
GO_REF:0000033
(MGI:5304206|PMID:22144916), (MGI:6194005|PMID:22885326), (MGI:6368097|PMID:31287866), (MGI:6368099|PMID:23871666), (MGI:6368109|PMID:31276587)		 RGD
GO_Central		 PMID:17071714 PMID:22144916 PMID:22885326 PMID:23871666 PMID:31276587 More... GO_REF:0000033 MGI:5304206 MGI:6194005 MGI:6368097 MGI:6368099 MGI:6368109 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Nsun6 NOP2/Sun RNA methyltransferase 6 involved_in ISO (PMID:28531330) RGD PMID:28531330 NCBI chr17:77,912,374...77,955,694
Ensembl chr17:77,912,377...77,950,006 		JBrowse link
G Tarbp1 TAR (HIV-1) RNA binding protein 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr19:54,398,268...54,449,293
Ensembl chr19:54,398,253...54,449,261 		JBrowse link
G Thada THADA, armadillo repeat containing involved_in ISO
IBA		 UniProtKB:Q03496 (PMID:25404562)
GO_REF:0000033		 RGD
GO_Central		 PMID:25404562 GO_REF:0000033 NCBI chr 6:10,183,942...10,488,007
Ensembl chr 6:10,183,982...10,487,159 		JBrowse link
G Thumpd2 THUMP domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:13,924,742...13,976,657
Ensembl chr 6:13,924,765...13,976,657 		JBrowse link
G Thumpd3 THUMP domain containing 3 involved_in ISO
IBA		 (PMID:34669960)
GO_REF:0000033		 RGD
GO_Central		 PMID:34669960 GO_REF:0000033 NCBI chr 4:146,185,422...146,209,802
Ensembl chr 4:146,185,503...146,211,246 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (MGI:6194005|PMID:22885326)
MGI:3695409 (PMID:16424344)
GO_REF:0000024		 RGD
UniProt		 PMID:16424344 PMID:22885326 GO_REF:0000024 MGI:6194005 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
G Trmo tRNA methyltransferase O involved_in ISS
ISO		 GO_REF:0000024
(PMID:25063302)		 UniProt
RGD		 PMID:25063302 GO_REF:0000024 NCBI chr 5:60,663,106...60,676,423
Ensembl chr 5:60,667,864...60,676,423 		JBrowse link
G Trmt10a tRNA methyltransferase 10A involved_in ISO
ISS		 (PMID:25053765)
GO_REF:0000024		 RGD
UniProt		 PMID:25053765 GO_REF:0000024 NCBI chr 2:226,669,445...226,684,166
Ensembl chr 2:226,669,832...226,684,151 		JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:34669960) RGD PMID:34669960 NCBI chr 1:204,103,298...204,104,151 JBrowse link
G Trmt12 tRNA methyltransferase 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:90,417,846...90,419,472
Ensembl chr 7:90,417,862...90,419,867 		JBrowse link
G Trmt13 tRNA methyltransferase 13 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:204,533,630...204,547,711
Ensembl chr 2:204,533,632...204,546,843 		JBrowse link
G Trmt44 tRNA methyltransferase 44 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:75,175,331...75,204,291
Ensembl chr14:75,182,029...75,200,147 		JBrowse link
G Trmt6 tRNA methyltransferase 6 non-catalytic subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:120,074,899...120,086,639
Ensembl chr 3:120,074,911...120,086,559 		JBrowse link
G Trmt61a tRNA methyltransferase 61A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:130,737,230...130,743,251
Ensembl chr 6:130,737,219...130,743,243 		JBrowse link
G Trmt9b tRNA methyltransferase 9B (putative) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:55,740,551...55,792,198
Ensembl chr16:55,743,018...55,792,144 		JBrowse link
G Tyw3 tRNA-yW synthesizing protein 3 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:243,529,912...243,552,043
Ensembl chr 2:243,529,946...243,552,039 		JBrowse link
G Wdr6 WD repeat domain 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499 		JBrowse link
tRNA methylthiolation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 acts_upstream_of_or_within ISO MGI:5750452 (MGI:5635958|PMID:25738458) RGD PMID:25738458 MGI:5635958 NCBI chr 3:142,838,081...142,872,669
Ensembl chr 3:142,708,028...142,872,677 		JBrowse link
G Cdkal1 CDK5 regulatory subunit associated protein 1-like 1 acts_upstream_of_or_within ISO MGI:5301443 (PMID:21841312) RGD PMID:21841312 NCBI chr17:34,718,701...35,271,276
Ensembl chr17:34,718,687...35,407,524 		JBrowse link
tRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005588.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Aars1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:16906134)
(MGI:5609717|PMID:25422440), (MGI:6159204|PMID:29769718)		 UniProt
RGD		 PMID:16906134 PMID:25422440 PMID:29769718 GO_REF:0000024 MGI:5609717 MGI:6159204 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147 		JBrowse link
G Ankrd16 ankyrin repeat domain 16 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6159204|PMID:29769718)		 UniProt
RGD		 PMID:29769718 GO_REF:0000024 MGI:6159204 NCBI chr17:66,735,325...66,748,533
Ensembl chr17:66,737,261...66,748,533 		JBrowse link
G B3gntl1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 involved_in IDA
ISO		 PMID:37992713
(PMID:37992713)		 RGD PMID:37992713 PMID:37992713 RGD:401966881 NCBI chr10:106,870,237...106,933,723
Ensembl chr10:106,873,169...106,933,637 		JBrowse link
G Dtwd1 DTW domain containing 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:31804502)		 UniProt
GO_Central
Ensembl
RGD		 PMID:31804502 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:113,392,402...113,409,322
Ensembl chr 3:113,392,457...113,408,105 		JBrowse link
G Dtwd2 DTW domain containing 2 involved_in ISO (PMID:31804502) RGD PMID:31804502 NCBI chr18:42,811,783...42,902,040
Ensembl chr18:42,816,681...42,901,832 		JBrowse link
G Elp5 elongator acetyltransferase complex subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,692,526...54,704,255
Ensembl chr10:54,692,530...54,704,923 		JBrowse link
G Gtdc1 glycosyltransferase-like domain containing 1 involved_in IDA
ISO
IEA		 PMID:37992713
(PMID:37992713)
GO_REF:0000107		 RGD
Ensembl		 PMID:37992713 PMID:37992713 GO_REF:0000107, RGD:401966881 NCBI chr 3:28,766,640...29,161,668
Ensembl chr 3:28,766,645...29,162,271 		JBrowse link
G Mettl1 methyltransferase 1, tRNA methylguanosine involved_in ISO (PMID:12403464), (PMID:15861136) RGD PMID:12403464 PMID:15861136 NCBI chr 7:62,864,860...62,869,202
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Mettl2 methyltransferase like 2 involved_in ISO (PMID:34268557) RGD PMID:34268557 NCBI chr10:90,095,527...90,109,354
Ensembl chr10:90,095,527...90,119,528 		JBrowse link
G Mettl6 methyltransferase 6, tRNA N3-cytidine involved_in ISO (PMID:34268557) RGD PMID:34268557 NCBI chr16:6,683,820...6,699,013
Ensembl chr16:6,583,465...6,698,975 		JBrowse link
G Nsun6 NOP2/Sun RNA methyltransferase 6 involved_in ISO (PMID:37226891) RGD PMID:37226891 NCBI chr17:77,912,374...77,955,694
Ensembl chr17:77,912,377...77,950,006 		JBrowse link
G Osgep O-sialoglycoprotein endopeptidase involved_in ISO (PMID:28805828) RGD PMID:28805828 NCBI chr15:24,137,149...24,144,568
Ensembl chr15:24,137,153...24,144,568 		JBrowse link
G Sars1 seryl-tRNA synthetase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:34268557)		 Ensembl
RGD		 PMID:34268557 GO_REF:0000107 NCBI chr 2:196,065,543...196,081,240
Ensembl chr 2:196,065,430...196,081,277 		JBrowse link
G Thg1l tRNA-histidine guanylyltransferase 1-like involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000104		 UniProt GO_REF:0000024 GO_REF:0000104 NCBI chr10:30,387,929...30,396,579
Ensembl chr10:30,387,940...30,396,687 		JBrowse link
G Thumpd1 THUMP domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:174,078,875...174,084,915
Ensembl chr 1:174,078,878...174,084,937 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 involved_in ISO (PMID:16424344) RGD PMID:16424344 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
G Trit1 tRNA isopentenyltransferase 1 involved_in ISO
IBA		 (PMID:24126054)
GO_REF:0000033
(MGI:5476410|PMID:23289710)		 RGD
GO_Central		 PMID:23289710 PMID:24126054 GO_REF:0000033 MGI:5476410 NCBI chr 5:135,293,472...135,341,522
Ensembl chr 5:135,295,330...135,338,764 		JBrowse link
G Trub1 TruB pseudouridine synthase family member 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:32926445)		 UniProt
GO_Central
RGD		 PMID:32926445 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:256,513,418...256,554,549
Ensembl chr 1:256,515,562...256,552,814 		JBrowse link
G Wdr4 WD repeat domain 4 involved_in ISO
IBA		 (PMID:15861136)
GO_REF:0000033		 RGD
GO_Central		 PMID:15861136 GO_REF:0000033 NCBI chr20:9,587,205...9,611,434
Ensembl chr20:9,587,207...9,603,581 		JBrowse link
tRNA N1-guanine methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trmt10a tRNA methyltransferase 10A involved_in ISO
IBA
IEA		 (PMID:32392304)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:32392304 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:226,669,445...226,684,166
Ensembl chr 2:226,669,832...226,684,151 		JBrowse link
G Trmt10b tRNA methyltransferase 10B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:59,548,845...59,572,529
Ensembl chr 5:59,548,869...59,572,526 		JBrowse link
G Trmt5 tRNA methyltransferase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:91,963,558...91,987,660
Ensembl chr 6:91,943,724...91,987,555 		JBrowse link
tRNA N2-guanine methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trmt1 tRNA methyltransferase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:23,456,756...23,471,581
Ensembl chr19:23,456,756...23,466,956 		JBrowse link
G Trmt1l tRNA methyltransferase 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:63,510,097...63,543,268
Ensembl chr13:63,510,204...63,543,266 		JBrowse link
tRNA nucleoside ribose methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 involved_in ISO (PMID:26310293) RGD PMID:26310293 NCBI chr  X:14,243,684...14,256,555
Ensembl chr  X:14,244,050...14,252,030 		JBrowse link
G Thada THADA, armadillo repeat containing involved_in ISO UniProtKB:Q03496 (PMID:35559166) RGD PMID:35559166 NCBI chr 6:10,183,942...10,488,007
Ensembl chr 6:10,183,982...10,487,159 		JBrowse link
tRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adat1 adenosine deaminase, tRNA-specific 1 involved_in ISO
IBA		 (PMID:10430867)
GO_REF:0000033		 RGD
GO_Central		 PMID:10430867 GO_REF:0000033 NCBI chr19:39,918,083...39,956,886
Ensembl chr19:39,918,227...39,956,883 		JBrowse link
G Adat3 adenosine deaminase, tRNA-specific 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:9,109,070...9,113,673
Ensembl chr 7:9,101,187...9,115,340 		JBrowse link
G Dtwd1 DTW domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:113,392,402...113,409,322
Ensembl chr 3:113,392,457...113,408,105 		JBrowse link
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in ISO
ISS		 (PMID:10329163)
GO_REF:0000024		 RGD
UniProt		 PMID:10329163 GO_REF:0000024 NCBI chr17:28,319,215...28,746,217
Ensembl chr17:28,319,280...28,746,337 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484 		JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484 		JBrowse link
G Mettl6 methyltransferase 6, tRNA N3-cytidine involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:6,683,820...6,699,013
Ensembl chr16:6,583,465...6,698,975 		JBrowse link
G Pop1 POP1 homolog, ribonuclease P/MRP subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141 		JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit acts_upstream_of_or_within ISO (PMID:11413139) RGD PMID:11413139 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336 		JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674 		JBrowse link
G Prorp protein only RNase P catalytic subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:72,669,659...72,762,419
Ensembl chr 6:72,670,847...72,762,416 		JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106 		JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in IMP
IBA
ISO		 GO_REF:0000033
(PMID:17308035)		 GO_Central
RGD		 PMID:17308035 PMID:12049746 GO_REF:0000033, RGD:737671 NCBI chr 3:54,616,616...54,626,203
Ensembl chr 3:54,616,619...54,626,203 		JBrowse link
G Ssbl1 small RNA binding exonuclease protection factor La like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:149,078,162...149,079,669
Ensembl chr 4:149,078,162...149,079,657 		JBrowse link
G Thg1l tRNA-histidine guanylyltransferase 1-like involved_in ISO
IBA
ISS		 (PMID:21059936)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:21059936 GO_REF:0000024 GO_REF:0000033 NCBI chr10:30,387,929...30,396,579
Ensembl chr10:30,387,940...30,396,687 		JBrowse link
G Tp53rka Tp53 tumor protein p53 regulating kinase A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:154,219,672...154,224,841
Ensembl chr 3:154,220,851...154,224,328 		JBrowse link
G Tp53rkb tumor protein p53 regulating kinase B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:155,529,298...155,532,662
Ensembl chr 3:155,529,298...155,532,728 		JBrowse link
G Tprkb Tp53rk binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:118,342,910...118,357,908
Ensembl chr 4:118,342,945...118,357,901 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117 		JBrowse link
G Trmt11 tRNA methyltransferase 11 homolog involved_in IEA GO_REF:0000043
GO_REF:0000104		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:27,054,437...27,109,765
Ensembl chr 1:27,054,420...27,201,610 		JBrowse link
G Trmt1l tRNA methyltransferase 1-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:63,510,097...63,543,268
Ensembl chr13:63,510,204...63,543,266 		JBrowse link
G Trmu tRNA mitochondrial 2-thiouridylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:116,969,750...116,987,704
Ensembl chr 7:116,969,756...116,986,355 		JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:13,049,220...13,059,836
Ensembl chr 3:13,033,745...13,059,930 		JBrowse link
tRNA pseudouridine synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pus1 pseudouridine synthase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:15772074)
(PMID:11027153), (PMID:11085940), (PMID:15327771)
GO_REF:0000033
GO_REF:0000117
(MGI:1928672|PMID:10094309), (MGI:5810940|PMID:27197761)		 RGD
GO_Central
UniProt		 PMID:10094309 PMID:11027153 PMID:11085940 PMID:15327771 PMID:15772074 More... GO_REF:0000033 GO_REF:0000117 MGI:1928672 MGI:5810940 NCBI chr12:45,880,364...45,889,196
Ensembl chr12:45,880,440...45,889,196 		JBrowse link
G Pus10 pseudouridine synthase 10 involved_in ISO
IBA		 (PMID:30530625), (PMID:31819270)
GO_REF:0000033		 RGD
GO_Central		 PMID:30530625 PMID:31819270 GO_REF:0000033 NCBI chr14:97,621,228...97,684,059
Ensembl chr14:97,621,391...97,684,046 		JBrowse link
G Pus3 pseudouridine synthase 3 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:27055666)
(PMID:11027153)
GO_REF:0000033		 RGD
GO_Central		 PMID:11027153 PMID:27055666 GO_REF:0000033 NCBI chr 8:33,910,461...33,918,716
Ensembl chr 8:33,911,357...33,918,714 		JBrowse link
G Pus7 pseudouridine synthase 7 involved_in ISO (PMID:29628141), (PMID:34718722) RGD PMID:29628141 PMID:34718722 NCBI chr 4:11,360,169...11,401,139
Ensembl chr 4:11,360,188...11,401,172 		JBrowse link
G Pusl1 pseudouridine synthase like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:166,497,643...166,500,647
Ensembl chr 5:166,496,755...166,500,611 		JBrowse link
tRNA splicing, via endonucleolytic cleavage and ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17495927), (PMID:24766809), (PMID:24766810)		 UniProt
GO_Central
RGD		 PMID:17495927 PMID:24766809 PMID:24766810 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421 		JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISO
ISS		 (PMID:24870230)
GO_REF:0000024		 RGD
UniProt		 PMID:24870230 GO_REF:0000024 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365 		JBrowse link
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:21311021), (PMID:24870230)		 UniProt
RGD		 PMID:21311021 PMID:24870230 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:17,907,668...17,927,136
Ensembl chr 7:17,907,705...17,927,132 		JBrowse link
G Rtraf RNA transcription, translation and transport factor involved_in ISO
IBA		 (PMID:24870230)
GO_REF:0000033		 RGD
GO_Central		 PMID:24870230 GO_REF:0000033 NCBI chr15:4,447,243...4,457,973
Ensembl chr15:4,442,573...4,457,972 		JBrowse link
G Rtraf-ps2 RNA transcription, translation and transport factor, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:39,745,222...39,791,427
Ensembl chr14:39,745,720...39,791,430 		JBrowse link
G Trpt1 tRNA phosphotransferase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:9826666)		 GO_Central
RGD		 PMID:9826666 GO_REF:0000033 NCBI chr 1:204,186,295...204,191,294
Ensembl chr 1:204,186,295...204,191,294 		JBrowse link
G Tsen15 tRNA splicing endonuclease subunit 15 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:64,490,216...64,505,591
Ensembl chr13:64,490,218...64,505,617 		JBrowse link
G Tsen2 tRNA splicing endonuclease subunit 2 involved_in ISO
IEA		 (PMID:17495927)
GO_REF:0000002		 RGD
InterPro		 PMID:17495927 GO_REF:0000002 NCBI chr 4:148,602,805...148,638,219
Ensembl chr 4:148,602,863...148,638,215 		JBrowse link
G Tsen54 tRNA splicing endonuclease subunit 54 involved_in ISO (PMID:17495927) RGD PMID:17495927 NCBI chr10:101,041,607...101,050,088
Ensembl chr10:101,042,503...101,050,087 		JBrowse link
G Zbtb8os zinc finger and BTB domain containing 8 opposite strand involved_in ISO
IBA		 (PMID:24870230)
GO_REF:0000033		 RGD
GO_Central		 PMID:24870230 GO_REF:0000033 NCBI chr 5:141,675,595...141,687,148
Ensembl chr 5:141,675,857...141,688,660 		JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl1 methyltransferase 1, tRNA methylguanosine involved_in ISO (PMID:36599982), (PMID:36599985) RGD PMID:36599982 PMID:36599985 NCBI chr 7:62,864,860...62,869,202
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO (MGI:6194005|PMID:22885326) RGD PMID:22885326 MGI:6194005 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Slfn2 schlafen family member 2 involved_in ISO (MGI:6713610|PMID:33986151) RGD PMID:33986151 MGI:6713610 NCBI chr10:67,953,322...67,959,659
Ensembl chr10:67,953,171...67,959,458 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6194005|PMID:22885326)		 UniProt
RGD		 PMID:22885326 GO_REF:0000024 MGI:6194005 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
tRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trnt1 tRNA nucleotidyl transferase 1 involved_in ISO (PMID:22076379), (PMID:25640237) RGD PMID:22076379 PMID:25640237 NCBI chr 4:139,681,115...139,703,611
Ensembl chr 4:139,680,858...139,703,611 		JBrowse link
tRNA thio-modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctu1 cytosolic thiouridylase subunit 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:94,115,431...94,121,224
Ensembl chr 1:94,115,420...94,121,221 		JBrowse link
G Ctu2 cytosolic thiouridylase subunit 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000104		 UniProt GO_REF:0000024 GO_REF:0000104 NCBI chr19:50,539,184...50,544,629
Ensembl chr19:50,539,352...50,544,623 		JBrowse link
G Mocs3 molybdenum cofactor synthesis 3 involved_in ISO (PMID:19017811), (PMID:30817134) RGD PMID:19017811 PMID:30817134 NCBI chr 3:156,939,763...156,941,723
Ensembl chr 3:156,939,809...156,941,890 		JBrowse link
G Urm1 ubiquitin related modifier 1 involved_in ISO (PMID:19017811) RGD PMID:19017811 NCBI chr 3:13,100,340...13,117,064
Ensembl chr 3:13,092,200...13,117,642
Ensembl chr 3:13,092,200...13,117,642 		JBrowse link
tRNA threonylcarbamoyladenosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctag2 cancer/testis antigen 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:143,531,907...143,533,201
Ensembl chr  X:143,531,907...143,533,201 		JBrowse link
G Ctag2l1 cancer/testis antigen 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:152,266,680...152,267,835
Ensembl chr  X:152,266,522...152,267,835 		JBrowse link
G Ctag2l2 cancer/testis antigen 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:152,340,658...152,341,853 JBrowse link
G Lage3 L antigen family, member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:152,138,209...152,139,632
Ensembl chr  X:152,138,218...152,139,632 		JBrowse link
G LOC134484033 EKC/KEOPS complex subunit LAGE3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134484035 EKC/KEOPS complex subunit LAGE3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Tp53rka Tp53 tumor protein p53 regulating kinase A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:154,219,672...154,224,841
Ensembl chr 3:154,220,851...154,224,328 		JBrowse link
G Tp53rkb tumor protein p53 regulating kinase B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:155,529,298...155,532,662
Ensembl chr 3:155,529,298...155,532,728 		JBrowse link
tRNA threonylcarbamoyladenosine modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gon7 GON7 subunit of KEOPS complex involved_in ISO (PMID:31481669) RGD PMID:31481669 NCBI chr 6:121,882,565...121,898,452
Ensembl chr 6:121,885,694...121,898,643
Ensembl chr 6:121,885,694...121,898,643 		JBrowse link
G Osgep O-sialoglycoprotein endopeptidase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:28805828), (PMID:31481669)		 UniProt
RGD		 PMID:28805828 PMID:31481669 GO_REF:0000024 GO_REF:0000104 NCBI chr15:24,137,149...24,144,568
Ensembl chr15:24,137,153...24,144,568 		JBrowse link
G Osgepl1 O-sialoglycoprotein endopeptidase-like 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:29760464), (PMID:32047918)		 UniProt
RGD		 PMID:29760464 PMID:32047918 GO_REF:0000024 GO_REF:0000104 NCBI chr 9:48,214,995...48,229,440
Ensembl chr 9:48,215,402...48,229,388 		JBrowse link
G Tprkb Tp53rk binding protein involved_in ISO
IBA
ISS		 (PMID:28805828)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:28805828 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:118,342,910...118,357,908
Ensembl chr 4:118,342,945...118,357,901 		JBrowse link
G Yrdc yrdC N(6)-threonylcarbamoyltransferase domain containing involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29760464), (PMID:31481669), (PMID:34545459)		 UniProt
Ensembl
RGD		 PMID:29760464 PMID:31481669 PMID:34545459 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:137,110,244...137,115,127
Ensembl chr 5:137,110,279...137,115,120 		JBrowse link
tRNA transcription by RNA polymerase III term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:196,570,210...196,573,077 JBrowse link
G Polr2e RNA polymerase II, I and III subunit E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,666,695...9,670,638
Ensembl chr 7:9,666,716...9,670,643 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,712,528...110,724,234
Ensembl chr 7:110,712,572...110,724,234 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,570,051...196,572,060 JBrowse link
G Polr3a RNA polymerase III subunit A involved_in ISO (PMID:35637192) RGD PMID:35637192 NCBI chr16:49,178...88,178
Ensembl chr16:49,521...88,172 		JBrowse link
G Polr3d RNA polymerase III subunit D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:45,511,587...45,516,256
Ensembl chr15:45,511,589...45,516,353 		JBrowse link
G Polr3e RNA polymerase III subunit E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:175,466,091...175,494,679
Ensembl chr 1:175,466,127...175,494,667 		JBrowse link
tRNA wobble adenosine to inosine editing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adat2 adenosine deaminase, tRNA-specific 2 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:7,954,520...7,975,254
Ensembl chr 1:7,954,631...7,975,251 		JBrowse link
tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elp1 elongator acetyltransferase complex subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:71,453,338...71,505,833
Ensembl chr 5:71,456,310...71,505,762 		JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:39,754,635...39,816,482
Ensembl chr15:39,754,632...39,816,445 		JBrowse link
tRNA wobble base cytosine methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun3 NOP2/Sun RNA methyltransferase 3 involved_in ISO (PMID:27214402), (PMID:27356879), (PMID:27497299) RGD PMID:27214402 PMID:27356879 PMID:27497299 NCBI chr11:37,490,832...37,575,607
Ensembl chr11:37,490,838...37,568,543 		JBrowse link
tRNA wobble cytosine modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:27497299) RGD PMID:27497299 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
tRNA wobble position uridine thiolation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctu1 cytosolic thiouridylase subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,115,431...94,121,224
Ensembl chr 1:94,115,420...94,121,221 		JBrowse link
G Ctu2 cytosolic thiouridylase subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:50,539,184...50,544,629
Ensembl chr19:50,539,352...50,544,623 		JBrowse link
G Mocs3 molybdenum cofactor synthesis 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:156,939,763...156,941,723
Ensembl chr 3:156,939,809...156,941,890 		JBrowse link
G Trmu tRNA mitochondrial 2-thiouridylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:116,969,750...116,987,704
Ensembl chr 7:116,969,756...116,986,355 		JBrowse link
tRNA wobble uridine modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh8 alkB homolog 8, tRNA methyltransferase involved_in ISO
IBA		 (PMID:21285950), (PMID:31079898)
GO_REF:0000033
(MGI:5607402|PMID:20583019)		 RGD
GO_Central		 PMID:20583019 PMID:21285950 PMID:31079898 GO_REF:0000033 MGI:5607402 NCBI chr 6:378,779...449,382
Ensembl chr 6:378,100...452,165 		JBrowse link
G Ctu1 cytosolic thiouridylase subunit 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:94,115,431...94,121,224
Ensembl chr 1:94,115,420...94,121,221 		JBrowse link
G Ctu2 cytosolic thiouridylase subunit 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000104		 UniProt GO_REF:0000024 GO_REF:0000104 NCBI chr19:50,539,184...50,544,629
Ensembl chr19:50,539,352...50,544,623 		JBrowse link
G Elp1 elongator acetyltransferase complex subunit 1 involved_in ISO
IEA		 (MGI:5506828|PMID:23717213)
GO_REF:0000107		 RGD
Ensembl		 PMID:23717213 GO_REF:0000107 MGI:5506828 NCBI chr 5:71,453,338...71,505,833
Ensembl chr 5:71,456,310...71,505,762 		JBrowse link
G Elp2 elongator acetyltransferase complex subunit 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:15,885,940...15,921,564
Ensembl chr18:15,885,934...15,921,599 		JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in ISO (PMID:29415125) RGD PMID:29415125 NCBI chr15:39,754,635...39,816,482
Ensembl chr15:39,754,632...39,816,445 		JBrowse link
G Elp4 elongator acetyltransferase complex subunit 4 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:92,162,271...92,385,251
Ensembl chr 3:92,162,280...92,385,243 		JBrowse link
G Elp4-ps1 elongator acetyltransferase complex subunit 4, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:172,729,315...172,730,773
Ensembl chr 2:172,728,560...172,730,748 		JBrowse link
G Elp5 elongator acetyltransferase complex subunit 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:54,692,526...54,704,255
Ensembl chr10:54,692,530...54,704,923 		JBrowse link
G Elp6 elongator acetyltransferase complex subunit 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:110,280,059...110,295,070
Ensembl chr 8:110,279,979...110,295,067 		JBrowse link
G Gtpbp3 GTP binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,175,766...18,180,857
Ensembl chr16:18,175,766...18,180,857 		JBrowse link
G Kti12 KTI12 chromatin associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:123,601,059...123,602,581
Ensembl chr 5:123,599,436...123,613,964 		JBrowse link
G Mocs3 molybdenum cofactor synthesis 3 involved_in ISO (PMID:19017811) RGD PMID:19017811 NCBI chr 3:156,939,763...156,941,723
Ensembl chr 3:156,939,809...156,941,890 		JBrowse link
G Mto1 mitochondrial tRNA translation optimization 1 acts_upstream_of_or_within ISO SGD:S000003205 (PMID:14522080) RGD PMID:14522080 NCBI chr 8:79,309,681...79,335,231
Ensembl chr 8:79,309,982...79,335,231 		JBrowse link
G Trmt9b tRNA methyltransferase 9B (putative) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:55,740,551...55,792,198
Ensembl chr16:55,743,018...55,792,144 		JBrowse link
G Urm1 ubiquitin related modifier 1 involved_in ISO (PMID:19017811) RGD PMID:19017811 NCBI chr 3:13,100,340...13,117,064
Ensembl chr 3:13,092,200...13,117,642
Ensembl chr 3:13,092,200...13,117,642 		JBrowse link
tRNA-guanine transglycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qng1 Q-nucleotide N-glycosylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,281,377...6,288,976
Ensembl chr17:6,281,400...6,288,975 		JBrowse link
G Qtrt1 queuine tRNA-ribosyltransferase catalytic subunit 1 involved_in IEA
IBA
ISO		 GO_REF:0000117
GO_REF:0000033
(MGI:3850292|PMID:19414587), (MGI:7565917|PMID:35815944)
(PMID:20354154), (PMID:34241577)		 UniProt
GO_Central
RGD		 PMID:19414587 PMID:20354154 PMID:34241577 PMID:35815944 GO_REF:0000033 GO_REF:0000117 MGI:3850292 MGI:7565917 NCBI chr 8:19,965,801...19,973,843
Ensembl chr 8:19,966,336...19,973,837 		JBrowse link
G Qtrt2 queuine tRNA-ribosyltransferase accessory subunit 2 involved_in ISO
IBA		 (PMID:20354154), (PMID:34241577)
GO_REF:0000033
(MGI:3850292|PMID:19414587), (MGI:7565917|PMID:35815944)		 RGD
GO_Central		 PMID:19414587 PMID:20354154 PMID:34241577 PMID:35815944 GO_REF:0000033 MGI:3850292 MGI:7565917 NCBI chr11:56,806,417...56,837,239
Ensembl chr11:56,806,385...56,837,228 		JBrowse link
tRNA-type intron splice site recognition and cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsen2 tRNA splicing endonuclease subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,602,805...148,638,219
Ensembl chr 4:148,602,863...148,638,215 		JBrowse link
G Tsen34 tRNA splicing endonuclease subunit 34 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:65,517,324...65,525,194
Ensembl chr 1:65,517,330...65,524,412 		JBrowse link
G Tsen54 tRNA splicing endonuclease subunit 54 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,041,607...101,050,088
Ensembl chr10:101,042,503...101,050,087 		JBrowse link
tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wars1 tryptophanyl-tRNA synthetase 1 involved_in IEA
ISO
IBA		 GO_REF:0000002
(MGI:3055639|PMID:12060739), (PMID:19941862)
GO_REF:0000033		 InterPro
RGD
GO_Central		 PMID:12060739 PMID:19941862 GO_REF:0000002 GO_REF:0000033 MGI:3055639 NCBI chr 6:127,776,088...127,807,273
Ensembl chr 6:127,776,090...127,807,269 		JBrowse link
tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Yars1 tyrosyl-tRNA synthetase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25533949)		 Ensembl
RGD		 PMID:25533949 GO_REF:0000107 NCBI chr 5:141,535,815...141,564,029
Ensembl chr 5:141,535,759...141,563,833 		JBrowse link
valyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vars1 valyl-tRNA synthetase 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr20:3,805,774...3,820,468
Ensembl chr20:3,805,776...3,820,298 		JBrowse link
G Vars2 valyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,077,132...3,087,994
Ensembl chr20:3,077,132...3,087,994 		JBrowse link
wobble position ribose methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 involved_in ISO (PMID:32558197) RGD PMID:32558197 NCBI chr  X:14,243,684...14,256,555
Ensembl chr  X:14,244,050...14,252,030 		JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:32558197)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:32558197 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499 		JBrowse link
wybutosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcmt2 leucine carboxyl methyltransferase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,099,960...108,102,084
Ensembl chr 3:108,099,961...108,102,084 		JBrowse link
G Trmt12 tRNA methyltransferase 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:90,417,846...90,419,472
Ensembl chr 7:90,417,862...90,419,867 		JBrowse link
G Tyw1 tRNA-yW synthesizing protein 1 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:26,332,020...26,418,286
Ensembl chr12:26,330,351...26,418,208 		JBrowse link
G Tyw3 tRNA-yW synthesizing protein 3 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:243,529,912...243,552,043
Ensembl chr 2:243,529,946...243,552,039 		JBrowse link
G Tyw5 tRNA-yW synthesizing protein 5 involved_in ISO
IBA		 (PMID:20739293), (PMID:20972222)
GO_REF:0000033		 RGD
GO_Central		 PMID:20739293 PMID:20972222 GO_REF:0000033 NCBI chr 9:58,961,100...58,979,188
Ensembl chr 9:58,961,106...58,979,188 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      macromolecule metabolic process 10147
        nucleic acid metabolic process 5149
          RNA metabolic process 4579
            tRNA metabolic process 200
              aminoacyl-tRNA metabolism involved in translational fidelity 13
              negative regulation of tRNA metabolic process + 4
              positive regulation of tRNA metabolic process + 1
              regulation of tRNA metabolic process + 6
              tRNA aminoacylation + 48
              tRNA decay + 15
              tRNA end turnover 0
              tRNA processing + 130
              tRNA threonylcarbamoyladenosine metabolic process + 21
              tRNA transcription + 7
Path 2
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      primary metabolic process 10923
        nucleobase-containing compound metabolic process 5735
          nucleic acid metabolic process 5149
            RNA metabolic process 4579
              tRNA metabolic process 200
                aminoacyl-tRNA metabolism involved in translational fidelity 13
                negative regulation of tRNA metabolic process + 4
                positive regulation of tRNA metabolic process + 1
                regulation of tRNA metabolic process + 6
                tRNA aminoacylation + 48
                tRNA decay + 15
                tRNA end turnover 0
                tRNA processing + 130
                tRNA threonylcarbamoyladenosine metabolic process + 21
                tRNA transcription + 7
paths to the root