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ONTOLOGY REPORT - ANNOTATIONS


Term:transcription by RNA polymerase II
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Accession:GO:0006366 term browser browse the term
Definition:The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
Synonyms:exact_synonym: transcription from Pol II promoter;   transcription from RNA polymerase II promoter
 related_synonym: RNA polymerase II transcription factor activity;   gene-specific transcription from RNA polymerase II promoter;   general transcription from RNA polymerase II promoter;   specific transcription from RNA polymerase II promoter
 alt_id: GO:0032568;   GO:0032569


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Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          gene expression 6295
            transcription, DNA-templated 3419
              transcription by RNA polymerase II 2506
                mRNA transcription by RNA polymerase II + 13
                negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter 0
                negative regulation of transcription by RNA polymerase II + 962
                positive regulation of DNA repair by transcription from RNA polymerase II promoter + 2
                positive regulation of transcription by RNA polymerase II + 1390
                pri-miRNA transcription by RNA polymerase II + 59
                promoter clearance from RNA polymerase II promoter 0
                regulation of transcription by RNA polymerase II + 2424
                snRNA transcription by RNA polymerase II + 14
                snoRNA transcription by RNA polymerase II 0
                telomeric repeat-containing RNA transcription by RNA polymerase II + 1
                termination of RNA polymerase II transcription + 7
                transcription elongation from RNA polymerase II promoter + 72
                transcription initiation from RNA polymerase II promoter + 78
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        organic cyclic compound metabolic process 5931
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              RNA metabolic process 4470
                RNA biosynthetic process 3478
                  nucleic acid-templated transcription 3464
                    transcription, DNA-templated 3419
                      transcription by RNA polymerase II 2506
                        mRNA transcription by RNA polymerase II + 13
                        negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter 0
                        negative regulation of transcription by RNA polymerase II + 962
                        positive regulation of DNA repair by transcription from RNA polymerase II promoter + 2
                        positive regulation of transcription by RNA polymerase II + 1390
                        pri-miRNA transcription by RNA polymerase II + 59
                        promoter clearance from RNA polymerase II promoter 0
                        regulation of transcription by RNA polymerase II + 2424
                        snRNA transcription by RNA polymerase II + 14
                        snoRNA transcription by RNA polymerase II 0
                        telomeric repeat-containing RNA transcription by RNA polymerase II + 1
                        termination of RNA polymerase II transcription + 7
                        transcription elongation from RNA polymerase II promoter + 72
                        transcription initiation from RNA polymerase II promoter + 78
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.