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ONTOLOGY REPORT - ANNOTATIONS

Term:mitotic recombination
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Accession:GO:0006312 term browser browse the term
Definition:The exchange, reciprocal or nonreciprocal, of genetic material between one DNA molecule and a homologous DNA region that occurs during mitotic cell cycles.
Synonyms:xref: Wikipedia:Mitotic_crossover


show annotations for term's descendants           Sort by:
mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359 (MGI:1312959|PMID:9808625), (MGI:1928200|PMID:11101838), (MGI:3700903|PMID:17210642) RGD PMID:9808625 PMID:11101838 PMID:17210642 MGI:1312959 MGI:1928200 MGI:3700903 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO
IBA		 (PMID:8811092)
PMID:21873635		 RGD PMID:8811092 PMID:21873635 RGD:13792537 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Msh2 mutS homolog 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Rad51 RAD51 recombinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
negative regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in ISO UniProtKB:O88700 (MGI:5800654|PMID:27010503) RGD PMID:27010503 MGI:5800654 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within
involved_in		 ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359 (MGI:1312959|PMID:9808625), (MGI:1928200|PMID:11101838), (MGI:3655554|PMID:16914751), (MGI:3700903|PMID:17210642)
UniProtKB:A8VU90 (MGI:5800654|PMID:27010503)		 RGD PMID:9808625 PMID:11101838 PMID:16914751 PMID:17210642 PMID:27010503 MGI:1312959 MGI:1928200 MGI:3655554 MGI:3700903 MGI:5800654 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1858054 (MGI:3513725|PMID:15480418)
GO_REF:0000107		 RGD
Ensembl		 PMID:15480418 GO_REF:0000107 MGI:3513725 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IBA		 (PMID:15507207)
(MGI:5883205|PMID:24120135)
PMID:21873635		 RGD PMID:15507207 PMID:24120135 PMID:21873635 MGI:5883205, RGD:13792537 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
positive regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
ISS		 (PMID:8756642)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8756642 GO_REF:0000024 GO_REF:0000107 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
resolution of mitotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23108668) RGD PMID:23108668 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IBA
ISO		 PMID:21873635
(PMID:23108668)		 RGD PMID:23108668 PMID:21873635 RGD:13792537 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q13207 (MGI:5707585|PMID:21076401)		 Ensembl
RGD		 PMID:21076401 GO_REF:0000107 MGI:5707585 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IEA
ISS		 (PMID:17589526)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17589526 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO UniProtKB:P02340 (MGI:5707585|PMID:21076401) RGD PMID:21076401 MGI:5707585 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO UniProtKB:P02340 (MGI:5707585|PMID:21076401) RGD PMID:21076401 MGI:5707585 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:15109494) RGD PMID:15109494 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:17589526) RGD PMID:17589526 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in ISO (PMID:17589526) RGD PMID:17589526 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Tep1 telomerase associated protein 1 involved_in IBA
ISO
IEA		 PMID:21873635
(PMID:10810353)
GO_REF:0000107		 RGD
Ensembl		 PMID:10810353 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr15:24,045,876...24,093,526
Ensembl chr15:24,045,878...24,093,526 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IBA
ISO		 PMID:21873635
(PMID:15507207)		 RGD PMID:15507207 PMID:21873635 RGD:13792537 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
telomeric DNA-containing double minutes formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19572
    metabolic process 11554
      organic substance metabolic process 10906
        macromolecule metabolic process 9177
          nucleic acid metabolic process 4980
            DNA metabolic process 993
              DNA recombination 329
                mitotic recombination 23
                  gene conversion at mating-type locus 0
                  negative regulation of mitotic recombination + 4
                  positive regulation of mitotic recombination + 1
                  regulation of mitotic recombination + 6
                  resolution of mitotic recombination intermediates 2
                  telomere maintenance via recombination + 15
Path 2
Term Annotations click to browse term
  biological_process 19572
    metabolic process 11554
      cellular metabolic process 10141
        cellular aromatic compound metabolic process 5700
          nucleobase-containing compound metabolic process 5467
            nucleic acid metabolic process 4980
              DNA metabolic process 993
                DNA recombination 329
                  mitotic recombination 23
                    gene conversion at mating-type locus 0
                    negative regulation of mitotic recombination + 4
                    positive regulation of mitotic recombination + 1
                    regulation of mitotic recombination + 6
                    resolution of mitotic recombination intermediates 2
                    telomere maintenance via recombination + 15
paths to the root