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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA recombination
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Accession:GO:0006310 term browser browse the term
Definition:Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.


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DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07035218.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr12:5,901,586...5,978,565 JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:19,425,684...19,508,459
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Blm BLM RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in IDA
IEA		 GO_REF:0000043
GO_REF:0000117		 UniProt
RGD		 PMID:12228710 GO_REF:0000043 GO_REF:0000117, RGD:632363 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2667614 (PMID:12504013)
GO_REF:0000043		 RGD
UniProt		 PMID:12504013 GO_REF:0000043 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:20,860,073...20,861,395 JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:79,586,718...79,595,515
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:14,413,661...14,420,489
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G ENSRNOG00000063582 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr14:22,414,838...22,415,965 JBrowse link
G ENSRNOG00000063954 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 5:82,622,228...82,672,833 JBrowse link
G ENSRNOG00000064887 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:149,498,772...149,499,899 JBrowse link
G ENSRNOG00000067229 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:83,921,470...83,930,590 JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2183944 (PMID:11707424)
GO_REF:0000117		 RGD
UniProt		 PMID:11707424 GO_REF:0000117 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Exo1 exonuclease 1 involved_in ISO
IEA
IBA		 UniProtKB:P39875 (PMID:10364235)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10364235 GO_REF:0000033 GO_REF:0000107 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Hdac10 histone deacetylase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:996,687...1,016,352
Ensembl chr 9:909,614...929,186 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:112,467,960...112,469,220
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:60,721,545...60,722,608
Ensembl chr11:47,252,569...47,253,669
Ensembl chr 1:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
Ensembl chr 1:69,045,641...69,046,640 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:87,705,846...87,722,635
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Iho1 interactor of HORMAD1 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,091,134...109,126,386
Ensembl chr 8:109,092,758...109,125,434 		JBrowse link
G Ino80c INO80 complex subunit C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80e INO80 complex subunit E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:190,891,315...190,902,902
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Lig1 DNA ligase 1 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:83,243,043...83,281,707
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC134483981 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:232,223,702...232,226,269
Ensembl chr 1:222,796,915...222,798,193 		JBrowse link
G LOC134485624 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:152,634,059...152,634,929 JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:140,539,590...140,569,891
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649 		JBrowse link
G Mnd1 meiotic nuclear divisions 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:171,731,523...171,794,124
Ensembl chr 2:169,433,540...169,496,096 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:99,522,801...99,544,432
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:70,594,116...70,611,976
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:92,825,568...93,071,037
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:191,053,228...191,055,554 JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 8:75,005,820...75,015,331
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,524,546...86,527,764
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
ISS		 (PMID:9705271)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9705271 GO_REF:0000024 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:8929543)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000043		 RGD
UniProt
Ensembl		 PMID:8929543 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 acts_upstream_of_or_within ISO PR:Q08297 (PMID:9192668) RGD PMID:9192668 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO
IEA		 (PMID:19451272)
GO_REF:0000107		 RGD
Ensembl		 PMID:19451272 GO_REF:0000107 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in ISO
IEA		 (PMID:12370410), (PMID:8702565)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
GO_REF:0000043		 RGD
Ensembl
InterPro
UniProt		 PMID:8702565 PMID:12370410 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rag1 recombination activating 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rag2 recombination activating 2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:86,562,871...86,573,034
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Recql RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA UniProt GO_REF:0000043
G Rpa1 replication protein A1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:51,568,413...51,568,839
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:190,716,759...190,722,307
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:230,195,894...230,265,677
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:17961633)		 Ensembl
UniProt
RGD		 PMID:17961633 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:74,502,994...74,512,766
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in		 ISO MGI:3050548 (PMID:17784788)
(PMID:24390283)		 RGD PMID:17784788 PMID:24390283 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Msh5 mutS homolog 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,779,180...3,797,996
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (PMID:24390283) RGD PMID:24390283 NCBI chr14:1,090,752...1,132,242
Ensembl chr14:949,448...987,831 		JBrowse link
G Rnf212b ring finger protein 212B involved_in ISO
IEA		 (PMID:38865271)
GO_REF:0000107		 RGD
Ensembl		 PMID:38865271 GO_REF:0000107 NCBI chr15:32,244,620...32,292,358
Ensembl chr15:28,244,083...28,321,347 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:109542 (PMID:22164254)		 GO_Central
RGD		 PMID:22164254 GO_REF:0000033 NCBI chr 2:192,985,164...193,145,234
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within
involved_in		 ISO MGI:105931 (PMID:22164254)
(PMID:12004129)		 RGD PMID:12004129 PMID:22164254 NCBI chr 7:24,761,476...24,775,933
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (PMID:18316482) RGD PMID:18316482 NCBI chr  X:69,973,012...70,236,544
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12556476) RGD PMID:12556476 NCBI chr10:36,749,365...36,764,335
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:26681308)
GO_REF:0000107		 RGD
Ensembl		 PMID:26681308 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
DNA strand displacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO
IEA		 (PMID:22579284)
GO_REF:0000107		 RGD
Ensembl		 PMID:22579284 GO_REF:0000107 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
DNA strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:11834724) RGD PMID:11834724 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G Xrcc2 X-ray repair cross complementing 2 involved_in ISO
IEA
IBA		 (PMID:11834724)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11834724 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4129733 (PMID:26490168)		 GO_Central
RGD		 PMID:26490168 GO_REF:0000033 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:32345962), (PMID:32460033), (PMID:32463460)
(PMID:15834424)
GO_REF:0000002		 RGD
InterPro		 PMID:15834424 PMID:32345962 PMID:32460033 PMID:32463460 GO_REF:0000002 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IEA		 (PMID:17639081)
GO_REF:0000107		 RGD
Ensembl		 PMID:17639081 GO_REF:0000107 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in ISO
IEA		 (PMID:30760716), (PMID:31242413), (PMID:32345962), (PMID:32463460)
GO_REF:0000107		 RGD
Ensembl		 PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 GO_REF:0000107 NCBI chr20:10,035,263...10,121,262
Ensembl chr20:10,035,562...10,121,242 		JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within ISO MGI:1921651 (PMID:30718482) RGD PMID:30718482 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:1349669|MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Morc2b microrchidia 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:12,314,341...12,318,421
Ensembl chr 7:12,314,349...12,318,421 		JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25894966), (PMID:29478809)		 UniProt
RGD		 PMID:25894966 PMID:29478809 GO_REF:0000024 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:15834424)
GO_REF:0000107		 RGD
Ensembl		 PMID:15834424 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO
IEA		 MGI:3045334 (PMID:27760146)
GO_REF:0000107		 RGD
Ensembl		 PMID:27760146 GO_REF:0000107 NCBI chr 3:182,173,615...182,189,273
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:1921651 (PMID:30718482)
GO_REF:0000107		 RGD
Ensembl		 PMID:30718482 GO_REF:0000107 NCBI chr19:480,160...534,534
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (PMID:30718482)
GO_REF:0000107		 RGD
Ensembl		 PMID:30718482 GO_REF:0000107 NCBI chr 3:129,591,933...129,610,293
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Cdc7 cell division cycle 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:2,949,538...2,969,656
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:65,535,492...65,548,270
Ensembl chr19:48,626,770...48,639,339 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:75,489,990...75,502,455
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:122,903,679...122,918,205
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:30,715,602...30,733,746
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:98,762,599...98,776,300
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:13,488,813...13,510,131
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,109,865...18,116,999
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 involved_in ISO
IEA		 (PMID:20613862)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:20613862 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:118,429,618...118,432,929
Ensembl chr 3:118,429,637...118,432,926 		JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 involved_in ISO (PMID:20613862) RGD PMID:20613862 NCBI chr12:17,207,315...17,222,975
Ensembl chr12:12,093,834...12,108,511 		JBrowse link
G Aste1 asteroid homolog 1 involved_in ISO
IEA		 (PMID:34354233)
GO_REF:0000107		 RGD
Ensembl		 PMID:34354233 GO_REF:0000107 NCBI chr 8:114,905,349...114,923,775
Ensembl chr 8:106,026,515...106,044,430 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO MGI:1857132 (PMID:19061978)
(PMID:10802669)		 RGD PMID:10802669 PMID:19061978 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:146,722,329...146,734,924
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IEA
IBA		 (PMID:23543748)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23543748 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IBA		 (PMID:17349954), (PMID:28398198)
GO_REF:0000033		 RGD
GO_Central		 PMID:17349954 PMID:28398198 GO_REF:0000033 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
MGI:2653913|MGI:2653914 (PMID:15485900)
GO_REF:0000002
(PMID:20729832), (PMID:21719596), (PMID:28398198)		 UniProt
Ensembl
GO_Central
RGD
InterPro		 PMID:15485900 PMID:20729832 PMID:21719596 PMID:28398198 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 acts_upstream_of_or_within ISO (PMID:15834424) RGD PMID:15834424 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO
IEA		 (PMID:25593309)
GO_REF:0000107		 RGD
Ensembl		 PMID:25593309 GO_REF:0000107 NCBI chr 4:159,584,623...159,617,867
Ensembl chr 4:157,899,391...157,931,541 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IEA		 (PMID:17639081)
GO_REF:0000107		 RGD
Ensembl		 PMID:17639081 GO_REF:0000107 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:59,198,513...59,289,535
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:14728600)
GO_REF:0000033		 RGD
GO_Central		 PMID:14728600 GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:26833090) RGD PMID:26833090 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016) RGD PMID:20603015 PMID:20603016 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:71,659,351...71,697,431
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23166748) RGD PMID:23166748 NCBI chr 6:39,666,675...39,697,480
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988) RGD PMID:11934988 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:19995904)
GO_REF:0000107		 RGD
Ensembl		 PMID:19995904 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO
IEA		 (PMID:35597237)
GO_REF:0000107		 RGD
Ensembl		 PMID:35597237 GO_REF:0000107 NCBI chr  X:139,972,742...139,986,923
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:16278671)		 GO_Central
Ensembl
RGD		 PMID:16278671 GO_REF:0000033 GO_REF:0000107 NCBI chr14:87,902,458...87,917,221
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO
IEA		 (PMID:19683501)
GO_REF:0000107		 RGD
Ensembl		 PMID:19683501 GO_REF:0000107 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA		 (PMID:18026119)
GO_REF:0000107		 RGD
Ensembl		 PMID:18026119 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO
IEA		 (PMID:19683501)
GO_REF:0000107		 RGD
Ensembl		 PMID:19683501 GO_REF:0000107 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within ISO (PMID:24062341) RGD PMID:24062341 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:30297459)
GO_REF:0000033
GO_REF:0000107
(PMID:27153538)		 UniProt
RGD
GO_Central
Ensembl		 PMID:27153538 PMID:30297459 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:19,561,253...19,586,412
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO
IEA		 (PMID:27153538), (PMID:32209463)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 PMID:32209463 GO_REF:0000107 NCBI chr10:79,336,041...79,392,315
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA
IBA
ISS		 (PMID:23401855)
GO_REF:0000107
(PMID:22771120)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:140,539,590...140,569,891
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA
ISS		 (PMID:22771115), (PMID:23401855)
(PMID:22771120), (PMID:23401855)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22771115 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000107 NCBI chr20:33,369,325...33,472,243
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24068956), (PMID:24240703)		 UniProt
Ensembl
RGD		 PMID:24068956 PMID:24240703 GO_REF:0000024 GO_REF:0000107 NCBI chr10:14,336,869...14,369,566
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in ISO
IEA
IBA		 (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27797818)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27797818 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:42,994,382...43,110,371
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
IEA
ISS		 (PMID:20332121)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20332121 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:99,522,801...99,544,432
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:18854157)
(PMID:15741314), (PMID:24316220), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:29670289), (PMID:30612738), (PMID:30787182), (PMID:31353207), (PMID:36563124), (PMID:38128537)		 UniProt
GO_Central
RGD		 PMID:15741314 PMID:18854157 PMID:24316220 PMID:27814491 PMID:27889449 More... GO_REF:0000024 GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:57,570,326...57,625,926
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
Ensembl
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:1,415,491...1,421,113
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nbn nibrin involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:22464731), (PMID:23115235), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:30787182), (PMID:30952868), (PMID:38961290)		 Ensembl
GO_Central
RGD		 PMID:22464731 PMID:23115235 PMID:27814491 PMID:27889449 PMID:28867292 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IBA
IEA
ISS		 (PMID:16810316)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
GO_REF:0000002		 RGD
GO_Central
Ensembl
UniProt
InterPro		 PMID:16810316 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:92,825,568...93,071,037
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr13:45,897,275...45,926,491
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Palb2 partner and localizer of BRCA2 involved_in ISO
IEA
IBA		 (PMID:19369211), (PMID:19423707), (PMID:26323318), (PMID:28398198)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:19369211 PMID:19423707 PMID:26323318 PMID:28398198 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pogz pogo transposable element derived with ZNF domain acts_upstream_of_or_within_positive_effect ISO (PMID:26721387) RGD PMID:26721387 NCBI chr 2:185,069,492...185,129,741
Ensembl chr 2:182,380,768...182,440,707 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
IEA
ISS		 (PMID:20693240)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20693240 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19995904) RGD PMID:19995904 Ensembl chr14:76,580,546...76,752,463 JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:190,823,447...190,830,247
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO
IEA		 (PMID:22909820)
GO_REF:0000107		 RGD
Ensembl		 PMID:22909820 GO_REF:0000107 NCBI chr 3:66,662,933...66,755,666
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO
IEA		 MGI:1929645 (PMID:22711701)
GO_REF:0000107		 RGD
Ensembl		 PMID:22711701 GO_REF:0000107 NCBI chr 3:160,620,500...160,648,716
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27889449), (PMID:28867292)		 Ensembl
RGD		 PMID:27889449 PMID:28867292 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 IEP
IEA
ISO		 GO_REF:0000107
GO_REF:0000002
(PMID:15359272), (PMID:15485900)
(PMID:15834424)
(PMID:17996710), (PMID:17996711), (PMID:18417535), (PMID:22778135), (PMID:23509288), (PMID:26681308), (PMID:26811421), (PMID:27239033), (PMID:32640219)
(PMID:16428451)		 Ensembl
InterPro
RGD		 PMID:15359272 PMID:15485900 PMID:15834424 PMID:16428451 PMID:17996710 More... GO_REF:0000002 GO_REF:0000107, RGD:9831188 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA
IBA		 (PMID:26323318)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:26323318 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51b RAD51 paralog B involved_in ISO
IEA
IBA		 (PMID:23149936)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:23149936 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:103,829,390...104,373,923
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO
IEA		 (PMID:23149936)
GO_REF:0000107		 RGD
Ensembl		 PMID:23149936 GO_REF:0000107 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:12379650)		 GO_Central
Ensembl
InterPro
RGD		 PMID:12379650 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO
IEA		 (PMID:16428451)
GO_REF:0000107
MGI:3617695|MGI:894697 (PMID:16428451), (PMID:19061978)		 RGD
Ensembl		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 5:29,829,465...29,901,967
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO
IEA		 MGI:2183934|MGI:3605986 (PMID:16428451), (PMID:19061978)
GO_REF:0000107		 RGD
Ensembl		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26721387), (PMID:27814491), (PMID:27889449), (PMID:30787182)		 UniProt
Ensembl
RGD		 PMID:26721387 PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000024 GO_REF:0000107 NCBI chr18:3,198,188...3,263,643
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO
IEA		 MGI:3652039 (PMID:22711701)
GO_REF:0000107		 RGD
Ensembl		 PMID:22711701 GO_REF:0000107 NCBI chr15:33,079,818...33,087,283
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Recql RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:44,686,482...44,844,668
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:26474068), (PMID:28575657), (PMID:28575658), (PMID:28691929) RGD PMID:26474068 PMID:28575657 PMID:28575658 PMID:28691929 NCBI chr19:56,145,221...56,177,871
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO
IEA
IBA		 (PMID:23543748)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23543748 GO_REF:0000033 GO_REF:0000107 NCBI chr17:6,261,961...6,269,947
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502055), (PMID:26502057)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:26502055 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:12,558,430...12,590,849
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:34,371,379...34,372,452
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721) RGD PMID:22492721 NCBI chr 1:163,662,582...163,724,154
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rpa1 replication protein A1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17765923)
GO_REF:0000107
GO_REF:0000033
MGI:3582609 (PMID:15470499)		 RGD
Ensembl
GO_Central		 PMID:15470499 PMID:17765923 GO_REF:0000033 GO_REF:0000107 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17765923)		 UniProt
GO_Central
RGD		 PMID:17765923 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:17765923)
GO_REF:0000033		 RGD
GO_Central		 PMID:17765923 GO_REF:0000033 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:51,568,413...51,568,839
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO
IEA		 (PMID:28834754), (PMID:29670289)
GO_REF:0000107		 RGD
Ensembl		 PMID:28834754 PMID:29670289 GO_REF:0000107 NCBI chr 3:166,179,742...166,214,448
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Sem1 SEM1 26S proteasome subunit involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:15359272)		 GO_Central
Ensembl
RGD		 PMID:15359272 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:35,638,306...35,658,462
Ensembl chr 4:34,671,848...34,692,005 		JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO
IEA		 (PMID:20813759)
GO_REF:0000107		 RGD
Ensembl		 PMID:20813759 GO_REF:0000107 NCBI chr 5:144,621,678...144,637,930
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sfr1 SWI5-dependent homologous recombination repair protein 1 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000002
(PMID:20976249)
GO_REF:0000033
GO_REF:0000107
(PMID:21252223)		 UniProt
InterPro
RGD
GO_Central
Ensembl		 PMID:20976249 PMID:21252223 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:256,560,533...256,564,547
Ensembl chr 1:246,597,044...246,623,250 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IBA		 (PMID:19595721)
GO_REF:0000033		 RGD
GO_Central		 PMID:19595721 GO_REF:0000033 NCBI chr 1:190,716,759...190,722,307
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595721), (PMID:19596235)
GO_REF:0000107		 RGD
Ensembl		 PMID:19595721 PMID:19596235 GO_REF:0000107 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO
IBA		 (PMID:16810316)
GO_REF:0000033		 RGD
GO_Central		 PMID:16810316 GO_REF:0000033 NCBI chr 1:230,195,894...230,265,677
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO
IBA		 (PMID:23509288), (PMID:27967308), (PMID:34697795)
GO_REF:0000033		 RGD
GO_Central		 PMID:23509288 PMID:27967308 PMID:34697795 GO_REF:0000033 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:20976249)
(PMID:21252223)		 UniProt
GO_Central
RGD		 PMID:20976249 PMID:21252223 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Swsap1 SWIM-type zinc finger 7 associated protein 1 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr 8:20,486,680...20,489,213
Ensembl chr 8:20,486,678...20,489,211 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27338793), (PMID:27797818), (PMID:30773278)		 UniProt
Ensembl
GO_Central
RGD		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27338793 PMID:27797818 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:110,226,696...110,241,459
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO
IEA		 (PMID:23543748)
GO_REF:0000107		 RGD
Ensembl		 PMID:23543748 GO_REF:0000107 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO
IEA		 (PMID:26811421), (PMID:35597237)
GO_REF:0000107		 RGD
Ensembl		 PMID:26811421 PMID:35597237 GO_REF:0000107 NCBI chr 8:112,766,791...112,815,203
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N acts_upstream_of ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:3877670 (PMID:24001775)		 GO_Central
Ensembl
RGD		 PMID:24001775 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:128,499,721...128,532,930
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:23149936)
GO_REF:0000107
GO_REF:0000002
MGI:3654106 (PMID:16777961)
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:16777961 PMID:23149936 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IEA		 (PMID:23149936)
GO_REF:0000107		 RGD
Ensembl		 PMID:23149936 GO_REF:0000107 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO
IEA		 (PMID:18026119)
GO_REF:0000107		 RGD
Ensembl		 PMID:18026119 GO_REF:0000107 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 involved_in ISO
IEA		 (PMID:20613862)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:20613862 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:103,764,864...103,828,520
Ensembl chr 6:98,032,520...98,095,480 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 involved_in ISO
IEA		 (PMID:25593309)
GO_REF:0000107		 RGD
Ensembl		 PMID:25593309 GO_REF:0000107 NCBI chr 3:174,948,162...175,061,382
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
G Zswim7 zinc finger, SWIM-type containing 7 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr10:47,456,843...47,469,084
Ensembl chr10:46,957,525...46,969,671 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fancm FA complementation group M involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:34937945)
GO_REF:0000107		 RGD
Ensembl		 PMID:34937945 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISO
ISS		 (PMID:21247901)
GO_REF:0000024		 RGD
UniProt		 PMID:21247901 GO_REF:0000024 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polb DNA polymerase beta acts_upstream_of_or_within ISO
IEA		 MGI:5427084 (PMID:24388753)
GO_REF:0000107		 RGD
Ensembl		 PMID:24388753 GO_REF:0000107 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO
IEA		 MGI:3624790 (PMID:23531880)
GO_REF:0000107		 RGD
Ensembl		 PMID:23531880 GO_REF:0000107 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in ISS
ISO		 GO_REF:0000024
(PMID:30017584), (PMID:31795137)		 UniProt
RGD		 PMID:30017584 PMID:31795137 GO_REF:0000024 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:3711150 (PMID:16819554) RGD PMID:16819554 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857732 (PMID:9823897)		 GO_Central
RGD		 PMID:9823897 GO_REF:0000033 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA
ISS		 (PMID:20558749)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20558749 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:2383951 (PMID:9768755)		 GO_Central
Ensembl
RGD		 PMID:9768755 GO_REF:0000033 GO_REF:0000107 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:16428437)
GO_REF:0000107
MGI:2178112 (PMID:16428437)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16428437 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1926771 (PMID:9875844)		 GO_Central
RGD		 PMID:9875844 GO_REF:0000033 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within
involved_in		 ISO (PMID:17713479)
(PMID:21518874)		 RGD PMID:17713479 PMID:21518874 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of ISO
IEA		 MGI:4127920 (PMID:25404367)
GO_REF:0000107		 RGD
Ensembl		 PMID:25404367 GO_REF:0000107 NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20421391), (PMID:21572431)		 UniProt
Ensembl
RGD		 PMID:20421391 PMID:21572431 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Cd40lg CD40 ligand involved_in IEA
ISO		 GO_REF:0000107
(PMID:7529792)		 Ensembl
RGD		 PMID:7529792 GO_REF:0000107 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:135,126,969...135,138,306 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944 (PMID:15280420) RGD PMID:15280420 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO
IEA		 MGI:2653925 (PMID:14716311)
GO_REF:0000107		 RGD
Ensembl		 PMID:14716311 GO_REF:0000107 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Exosc3 exosome component 3 involved_in ISO
IEA		 (PMID:21255825)
GO_REF:0000107		 RGD
Ensembl		 PMID:21255825 GO_REF:0000107 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc6 exosome component 6 involved_in ISO
IEA		 (PMID:21255825)
GO_REF:0000107		 RGD
Ensembl		 PMID:21255825 GO_REF:0000107 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:17713479) RGD PMID:17713479 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857946 (PMID:12743174)
GO_REF:0000107		 RGD
Ensembl		 PMID:12743174 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO
IEA		 MGI:1857940|MGI:2151801 (PMID:10430621), (PMID:12743174)
GO_REF:0000107		 RGD
Ensembl		 PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO
IEA		 MGI:109352|MGI:3653701 (PMID:16618598), (PMID:17015724)
GO_REF:0000107		 RGD
Ensembl		 PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Nbn nibrin involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15668383)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15668383 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930|MGI:5501251 (PMID:25124037), (PMID:31182790) RGD PMID:25124037 PMID:31182790 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19139091)		 UniProt
Ensembl
RGD		 PMID:19139091 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20080757)		 UniProt
RGD		 PMID:20080757 GO_REF:0000024 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20080757)		 UniProt
RGD		 PMID:20080757 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Sanbr SANT and BTB domain regulator of CSR involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:33831416)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:33831416 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:101,717,619...101,787,092
Ensembl chr14:97,516,413...97,581,346 		JBrowse link
G Swap70 switching B-cell complex subunit SWAP70 acts_upstream_of_or_within ISO
IEA		 (PMID:9642267)
GO_REF:0000107		 RGD
Ensembl		 PMID:9642267 GO_REF:0000107 NCBI chr 1:173,702,338...173,763,540
Ensembl chr 1:164,267,609...164,328,794 		JBrowse link
G Ung uracil-DNA glycosylase acts_upstream_of_or_within ISO MGI:1343961 (PMID:17015724) RGD PMID:17015724 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479) RGD PMID:17713479 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO
IEA		 (PMID:27174992)
GO_REF:0000107		 RGD
Ensembl		 PMID:27174992 GO_REF:0000107 NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603 		JBrowse link
isotype switching to IgD isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_positive_effect ISO MGI:7719862 (PMID:17548624) RGD PMID:17548624 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of ISO
IEA		 MGI:103034|MGI:2158438 (PMID:10490661)
GO_REF:0000107		 RGD
Ensembl		 PMID:10490661 GO_REF:0000107 NCBI chr11:90,358,753...90,382,049
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO MGI:7719862 (PMID:17548624) RGD PMID:17548624 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO
IEA		 MGI:3696705 (PMID:16275384)
GO_REF:0000107		 RGD
Ensembl		 PMID:16275384 GO_REF:0000107 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:14988498) RGD PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of ISO MGI:107187 (PMID:10490661) RGD PMID:10490661 NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495 		JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO MGI:7719862 (PMID:17548624) RGD PMID:17548624 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) RGD PMID:16148103 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:56,579,201...56,589,662 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:14988498) RGD PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (PMID:31000436), (PMID:31003867) RGD PMID:31000436 PMID:31003867 NCBI chr 2:29,793,882...29,987,621
Ensembl chr 2:28,092,882...28,241,719 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:27796301)		 GO_Central
RGD		 PMID:27796301 GO_REF:0000033 NCBI chr 6:97,314,829...97,351,069
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
meiotic gene conversion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm9 PR/SET domain 9 acts_upstream_of_or_within ISO (PMID:21750151) RGD PMID:21750151 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (PMID:23396135), (PMID:24390283) RGD PMID:23396135 PMID:24390283 NCBI chr14:1,090,752...1,132,242
Ensembl chr14:949,448...987,831 		JBrowse link
G Tex11 testis expressed 11 involved_in ISO (PMID:18369460) RGD PMID:18369460 NCBI chr  X:69,973,012...70,236,544
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
meiotic joint molecule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3ip PSMC3 interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,524,546...86,527,764
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
meiotic strand invasion involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3ip PSMC3 interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,524,546...86,527,764
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359 (PMID:11101838), (PMID:17210642), (PMID:9808625) RGD PMID:9808625 PMID:11101838 PMID:17210642 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO
IBA		 (PMID:8811092)
GO_REF:0000033		 RGD
GO_Central		 PMID:8811092 GO_REF:0000033 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Msh2 mutS homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
negative regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO
IEA		 (PMID:9671747)
GO_REF:0000107		 RGD
Ensembl		 PMID:9671747 GO_REF:0000107 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G H1f0 H1.0 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:112,473,280...112,475,140
Ensembl chr 7:110,592,208...110,594,694 		JBrowse link
G H1f1 H1.1 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011 		JBrowse link
G H1f10 H1.10 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,440,515...120,441,578
Ensembl chr 4:120,440,870...120,441,448 		JBrowse link
G H1f2 H1.2 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,818,962...41,820,453
Ensembl chr17:41,388,477...41,392,635 		JBrowse link
G H1f4 H1.4 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,914,425...41,915,206
Ensembl chr17:41,486,560...41,487,403 		JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:47,421,875...47,422,905
Ensembl chr17:42,726,127...42,769,160 		JBrowse link
G H1f6 H1.6 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,855,216...41,855,960
Ensembl chr17:41,427,323...41,428,119 		JBrowse link
G H1f7 H1.7 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930 		JBrowse link
G H1f8 H1.8 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254 		JBrowse link
G H4f3 H1.3 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,979,562...41,980,341
Ensembl chr17:41,529,667...41,552,334 		JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321 		JBrowse link
G Lig3 DNA ligase 3 acts_upstream_of_or_within ISO MGI:3629052 (PMID:16648486) RGD PMID:16648486 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:17715146)
GO_REF:0000107
MGI:1858055 (PMID:10545954), (PMID:7628020)		 RGD
Ensembl		 PMID:7628020 PMID:10545954 PMID:17715146 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in ISO (PMID:17715146) RGD PMID:17715146 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:17715146)
GO_REF:0000107
MGI:2151803 (PMID:10545954)		 RGD
Ensembl		 PMID:10545954 PMID:17715146 GO_REF:0000107 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3835812 (PMID:12509447) RGD PMID:12509447 NCBI chr 4:147,291,463...147,376,904
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:22579284)		 GO_Central
Ensembl
RGD		 PMID:22579284 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
negative regulation of DNA recombination at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1 protection of telomeres 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20339076), (PMID:20622869)		 UniProt
Ensembl
RGD		 PMID:20339076 PMID:20622869 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,886,211...56,893,300
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO
IEA		 (PMID:9461559)
GO_REF:0000107		 RGD
Ensembl		 PMID:9461559 GO_REF:0000107 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:31353207)		 Ensembl
UniProt
RGD		 PMID:31353207 GO_REF:0000024 GO_REF:0000107 NCBI chr10:56,198,534...56,203,185
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IEA
IBA		 (PMID:30356214), (PMID:31544964)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:30356214 PMID:31544964 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28512243)		 UniProt
RGD		 PMID:28512243 GO_REF:0000024 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2156841 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:19736316)
(PMID:24108124)		 RGD PMID:19736316 PMID:24108124 NCBI chr17:71,659,351...71,697,431
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Helb DNA helicase B involved_in ISO
IEA		 (PMID:26774285)
GO_REF:0000107		 RGD
Ensembl		 PMID:26774285 GO_REF:0000107 NCBI chr 7:57,474,115...57,502,221
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Klhl15 kelch-like family member 15 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27561354), (PMID:35219381)		 UniProt
Ensembl
RGD		 PMID:27561354 PMID:35219381 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:62,987,762...63,043,980
Ensembl chr  X:58,995,461...59,046,069 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO (PMID:27338793) RGD PMID:27338793 NCBI chr12:37,800,339...37,823,706
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parpbp PARP1 binding protein involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
GO_REF:0000002
(PMID:22153967)		 UniProt
Ensembl
GO_Central
InterPro
RGD		 PMID:22153967 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:22,511,427...22,580,834
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:28512243)		 Ensembl
UniProt
RGD		 PMID:28512243 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Polq DNA polymerase theta involved_in ISO
IEA		 (PMID:25642963), (PMID:28695890), (PMID:36455556)
GO_REF:0000107
(PMID:25642960), (PMID:28687761), (PMID:29058711)		 RGD
Ensembl		 PMID:25642960 PMID:25642963 PMID:28687761 PMID:28695890 PMID:29058711 More... GO_REF:0000107 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in ISO
IEA
ISS		 (PMID:28735897)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28735897 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:107,877,835...107,965,476
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO
IEA		 (PMID:23333306)
GO_REF:0000107
(PMID:23306437), (PMID:23333305)		 RGD
Ensembl		 PMID:23306437 PMID:23333305 PMID:23333306 GO_REF:0000107 NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Senp3 SUMO specific peptidase 3 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr10:54,889,445...54,898,359
Ensembl chr10:54,390,694...54,399,593 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:140,391,611...140,462,273
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IEA
IBA		 (PMID:29656893)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:29656893 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO
IEA		 (PMID:25294876)
GO_REF:0000107		 RGD
Ensembl		 PMID:25294876 GO_REF:0000107 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO
IEA		 (PMID:23333306), (PMID:23345425)
GO_REF:0000107
(PMID:20362325), (PMID:23333305)		 RGD
Ensembl		 PMID:20362325 PMID:23333305 PMID:23333306 PMID:23345425 GO_REF:0000107 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO
IEA		 (PMID:30612738)
GO_REF:0000107		 RGD
Ensembl		 PMID:30612738 GO_REF:0000107 NCBI chr 2:176,310,524...176,325,724
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO
IEA		 (PMID:26000965)
GO_REF:0000107		 RGD
Ensembl		 PMID:26000965 GO_REF:0000107 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
negative regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein involved_in ISO MGI:6723808|MGI:7719862 (PMID:24399151) RGD PMID:24399151 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO
IEA		 MGI:103034|MGI:2158438 (PMID:10490661)
GO_REF:0000107		 RGD
Ensembl		 PMID:10490661 GO_REF:0000107 NCBI chr11:90,358,753...90,382,049
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO
IEA		 MGI:3696705 (PMID:16275384)
GO_REF:0000107		 RGD
Ensembl		 PMID:16275384 GO_REF:0000107 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3695433 (PMID:17137798)
GO_REF:0000107		 RGD
Ensembl		 PMID:17137798 GO_REF:0000107 NCBI chr18:30,516,931...30,567,199
Ensembl chr18:30,250,613...30,322,311 		JBrowse link
negative regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in ISO
IEA		 UniProtKB:O88700 (PMID:27010503)
GO_REF:0000107		 RGD
Ensembl		 PMID:27010503 GO_REF:0000107 NCBI chr16:18,109,865...18,116,999
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within
involved_in		 ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359 (PMID:11101838), (PMID:16914751), (PMID:17210642), (PMID:9808625)
UniProtKB:A8VU90 (PMID:27010503)		 RGD PMID:9808625 PMID:11101838 PMID:16914751 PMID:17210642 PMID:27010503 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:1858054 (PMID:15480418)
GO_REF:0000107		 RGD
Ensembl		 PMID:15480418 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IEA
IBA		 (PMID:15507207)
GO_REF:0000107
(PMID:24120135)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15507207 PMID:24120135 GO_REF:0000033 GO_REF:0000107 NCBI chr19:51,887,221...51,915,756
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
non-replicative DNA transposition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgbd5 piggyBac transposable element derived 5 involved_in ISO
IEA
IBA		 (PMID:26406119)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:26406119 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr19:52,336,751...52,401,906
Ensembl chr19:52,336,751...52,402,397 		JBrowse link
positive regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (PMID:31453335) RGD PMID:31453335 NCBI chr12:24,517,428...24,547,942
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Actl6a actin-like 6A involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr2 actin related protein 2 involved_in ISO
IEA
ISS		 (PMID:29925947)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29925947 GO_REF:0000024 GO_REF:0000107 NCBI chr14:98,500,119...98,535,092
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO
IEA		 (PMID:28381560)
GO_REF:0000107		 RGD
Ensembl		 PMID:28381560 GO_REF:0000107 NCBI chr 7:129,326,371...129,443,813
Ensembl chr 7:127,447,278...127,563,512 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr18:26,455,824...26,504,106
Ensembl chr18:26,181,732...26,229,884 		JBrowse link
G Crebbp CREB binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:38128537)		 UniProt
RGD		 PMID:38128537 GO_REF:0000024 NCBI chr10:11,842,307...11,968,266
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 5:136,380,211...136,388,229
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr12:51,551,665...51,658,635
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:59,198,513...59,289,535
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:33,867,219...33,967,908
Ensembl chr 3:33,867,219...33,967,150 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 (PMID:25820262)
GO_REF:0000107		 RGD
Ensembl		 PMID:25820262 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1328362 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fus Fus RNA binding protein involved_in ISO (PMID:10567410) RGD PMID:10567410 NCBI chr 1:192,007,011...192,020,887
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
ISS		 (PMID:26721387)
GO_REF:0000024		 RGD
UniProt		 PMID:26721387 GO_REF:0000024 NCBI chr 9:996,687...1,016,352
Ensembl chr 9:909,614...929,186 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:24005329)
GO_REF:0000107		 RGD
Ensembl		 PMID:24005329 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 4:51,439,218...51,469,502
Ensembl chr 4:50,477,962...50,503,715 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27153538), (PMID:32832608), (PMID:38961290)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27153538 PMID:32832608 PMID:38961290 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISO
ISS		 (PMID:31609975)
(PMID:25936915)
GO_REF:0000024		 RGD
UniProt		 PMID:25936915 PMID:31609975 GO_REF:0000024 NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr10:79,336,041...79,392,315
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 8:99,522,801...99,544,432
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr  X:104,874,850...104,885,946
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Mrgbp MRG domain binding protein involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 3:167,697,129...167,700,592
Ensembl chr 3:167,697,185...167,700,592 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:35,002,440...35,026,555
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (PMID:29955025) RGD PMID:29955025 NCBI chr 8:88,103,675...88,104,848
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
ISS
IEA		 (PMID:26344098), (PMID:30356214)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:26344098 PMID:30356214 GO_REF:0000024 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO
IEA		 (PMID:30952868)
GO_REF:0000107		 RGD
Ensembl		 PMID:30952868 GO_REF:0000107 NCBI chr14:99,455,970...99,510,474
Ensembl chr14:95,254,589...95,308,285
Ensembl chr 1:95,254,589...95,308,285 		JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr 7:9,197,032...9,210,557
Ensembl chr 7:8,546,312...8,559,808 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15741314), (PMID:29651020)		 UniProt
Ensembl
RGD		 PMID:15741314 PMID:29651020 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA		 (PMID:17996710), (PMID:17996711)
GO_REF:0000107		 RGD
Ensembl		 PMID:17996710 PMID:17996711 GO_REF:0000107 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO
IEA		 (PMID:36563124)
GO_REF:0000107		 RGD
Ensembl		 PMID:36563124 GO_REF:0000107 NCBI chr 7:10,590,013...10,597,585
Ensembl chr 7:9,938,229...9,946,738 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23115235)		 UniProt
RGD		 PMID:23115235 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO
IEA		 (PMID:22464731)
GO_REF:0000107		 RGD
Ensembl		 PMID:22464731 GO_REF:0000107 NCBI chr 2:59,888,406...59,916,471
Ensembl chr 2:58,161,229...58,189,338 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
IEA
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:654,822...678,738 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr12:14,851,758...14,941,444
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO
IEA		 (PMID:29925947)
GO_REF:0000107		 RGD
Ensembl		 PMID:29925947 GO_REF:0000107 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO
IEA		 (PMID:27239033), (PMID:27463890)
GO_REF:0000107		 RGD
Ensembl		 PMID:27239033 PMID:27463890 GO_REF:0000107 NCBI chr 8:128,499,721...128,532,930
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
IEA
ISS		 (PMID:25512560)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25512560 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 7:54,744,220...54,751,361
Ensembl chr 7:52,858,305...52,865,635 		JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO
IEA		 (PMID:12496423)
GO_REF:0000107		 RGD
Ensembl		 PMID:12496423 GO_REF:0000107 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 acts_upstream_of_or_within ISO
IEA		 (PMID:21255825)
GO_REF:0000107		 RGD
Ensembl		 PMID:21255825 GO_REF:0000107 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc6 exosome component 6 acts_upstream_of_or_within ISO
IEA		 (PMID:21255825)
GO_REF:0000107		 RGD
Ensembl		 PMID:21255825 GO_REF:0000107 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31806351)		 UniProt
Ensembl
RGD		 PMID:31806351 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:121,950,129...121,972,937
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:28114273)		 UniProt
Ensembl
RGD		 PMID:28114273 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:210,429,672...210,479,042
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:28114273)		 UniProt
Ensembl
RGD		 PMID:28114273 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:78,128,325...78,135,931
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:20671152) RGD PMID:20671152 NCBI chr 4:8,258,930...8,310,490
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO
IEA		 (PMID:23306439), (PMID:23333305), (PMID:23333306)
GO_REF:0000107		 RGD
Ensembl		 PMID:23306439 PMID:23333305 PMID:23333306 GO_REF:0000107 NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:140,391,611...140,462,273
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IEA
IBA		 (PMID:29656893)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:29656893 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Tfrc transferrin receptor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26642240)		 UniProt
Ensembl
RGD		 PMID:26642240 GO_REF:0000024 GO_REF:0000107 NCBI chr11:81,668,478...81,690,318
Ensembl chr11:68,163,413...68,185,257 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO
IEA		 (PMID:23345425), (PMID:23760478)
GO_REF:0000107
(PMID:15077110), (PMID:15159415)		 RGD
Ensembl		 PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478 GO_REF:0000107 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO
IEA		 (PMID:23241889)
GO_REF:0000107		 RGD
Ensembl		 PMID:23241889 GO_REF:0000107 NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO
IEA		 UniProtKB:Q9JK91 (PMID:10430621)
GO_REF:0000107		 RGD
Ensembl		 PMID:10430621 GO_REF:0000107 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:14988498)		 AgBase
Ensembl
RGD		 PMID:14988498 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:14988498)
MGI:3038886 (PMID:14988498)
GO_REF:0000033		 RGD
GO_Central		 PMID:14988498 GO_REF:0000033 NCBI chr10:54,898,805...54,901,815
Ensembl chr10:54,400,065...54,403,042 		JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin-like cytokine factor 1 involved_in ISO (PMID:12023368) RGD PMID:12023368 NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:201,507,859...201,517,605 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:14988498) RGD PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO MGI:107187 (PMID:10490661) RGD PMID:10490661 NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495 		JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO
IEA		 MGI:4127920 (PMID:25404367)
GO_REF:0000107		 RGD
Ensembl		 PMID:25404367 GO_REF:0000107 NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Cd28 Cd28 molecule acts_upstream_of_or_within ISO MGI:1857150 (PMID:7688139) RGD PMID:7688139 NCBI chr 9:69,660,316...69,689,192
Ensembl chr 9:62,166,192...62,194,685 		JBrowse link
G Cd40 CD40 molecule acts_upstream_of_or_within ISO (PMID:12882831) RGD PMID:12882831 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:153,790,449...153,805,534 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) RGD PMID:12882831 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO MGI:1857191 (PMID:1830926) RGD PMID:1830926 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:12882831), (PMID:14988498) RGD PMID:12882831 PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Mlh1 mutL homolog 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in ISO (PMID:26744420) RGD PMID:26744420 NCBI chr 1:191,053,228...191,055,554 JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:26744420) RGD PMID:26744420 NCBI chr 4:8,258,930...8,310,490
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO
IEA		 UniProtKB:Q9JK91 (PMID:10430621)
GO_REF:0000107		 RGD
Ensembl		 PMID:10430621 GO_REF:0000107 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:2181288 (PMID:9015183) RGD PMID:9015183 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO
IEA		 MGI:2180194 (PMID:12882831)
GO_REF:0000107		 RGD
Ensembl		 PMID:12882831 GO_REF:0000107 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
positive regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm9 PR/SET domain 9 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21750151)
(PMID:20044538), (PMID:22028627)
GO_REF:0000033		 RGD
GO_Central		 PMID:20044538 PMID:21750151 PMID:22028627 GO_REF:0000033 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA		 (PMID:17996711)
GO_REF:0000107		 RGD
Ensembl		 PMID:17996711 GO_REF:0000107 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12556476) RGD PMID:12556476 NCBI chr10:36,749,365...36,764,335
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
positive regulation of strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wrn WRN RecQ like helicase involved_in ISO (PMID:26420422) RGD PMID:26420422 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:32345962)
(PMID:15834424)		 RGD PMID:15834424 PMID:32345962 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G C14h1orf146 similar to human chromosome 1 open reading frame 146 involved_in IBA
ISO		 GO_REF:0000033
(PMID:30746471)		 GO_Central
RGD		 PMID:30746471 GO_REF:0000033 NCBI chr14:2,230,404...2,250,420
Ensembl chr14:2,231,451...2,270,782 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
(PMID:24390283)		 GO_Central
InterPro
RGD		 PMID:24390283 GO_REF:0000002 GO_REF:0000033 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO MGI:4377328 (PMID:26158450) RGD PMID:26158450 NCBI chr 8:112,041,586...112,093,061
Ensembl chr 8:103,162,700...103,214,177 		JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 acts_upstream_of_or_within ISO MGI:2177588 (PMID:23133398) RGD PMID:23133398 NCBI chr10:15,247,525...15,255,573
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Cntd1 cyclin N-terminal domain containing 1 acts_upstream_of_or_within ISO MGI:4363686 (PMID:24891606) RGD PMID:24891606 NCBI chr10:86,221,430...86,231,812 JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IEA
IBA		 (PMID:21307306)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000002
(PMID:17639081)
GO_REF:0000033		 RGD
Ensembl
UniProt
InterPro
GO_Central		 PMID:17639081 PMID:21307306 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857946 (PMID:10385520), (PMID:16307920), (PMID:8673133)
GO_REF:0000107		 RGD
Ensembl		 PMID:8673133 PMID:10385520 PMID:16307920 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mnd1 meiotic nuclear divisions 1 involved_in ISO
IEA
IBA		 (PMID:16407260)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:16407260 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:171,731,523...171,794,124
Ensembl chr 2:169,433,540...169,496,096 		JBrowse link
G Msh4 mutS homolog 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:245,445,118...245,504,493
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in ISO
IEA		 (PMID:16407260)
GO_REF:0000107		 RGD
Ensembl		 PMID:16407260 GO_REF:0000107 NCBI chr10:86,524,546...86,527,764
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rad50 RAD50 double strand break repair protein TAS RGD PMID:10908350 RGD:68816 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:15834424)
GO_REF:0000107		 RGD
Ensembl		 PMID:15834424 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51c RAD51 paralog C acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:3707422|MGI:3707425 (PMID:17312021)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:17312021 GO_REF:0000033 GO_REF:0000107 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IBA GO_Central GO_REF:0000033
G Rnf212 ring finger protein 212 involved_in ISO
IEA		 (PMID:23396135), (PMID:24390283)
GO_REF:0000002		 RGD
InterPro		 PMID:23396135 PMID:24390283 GO_REF:0000002 NCBI chr14:1,090,752...1,132,242
Ensembl chr14:949,448...987,831 		JBrowse link
G Rnf212b ring finger protein 212B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:32,244,620...32,292,358
Ensembl chr15:28,244,083...28,321,347 		JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO
IEA		 (PMID:30272023)
GO_REF:0000107		 RGD
Ensembl		 PMID:30272023 GO_REF:0000107 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
MGI:2178805 (PMID:16307920)		 GO_Central
InterPro
Ensembl
RGD		 PMID:16307920 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:182,173,615...182,189,273
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Syce3 synaptonemal complex central element protein 3 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(PMID:21637789)		 GO_Central
InterPro
Ensembl
RGD		 PMID:21637789 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:120,456,800...120,482,882
Ensembl chr 7:120,456,800...120,482,973 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15937223)		 UniProt
RGD		 PMID:15937223 GO_REF:0000024 NCBI chr 2:192,985,164...193,145,234
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Tex11 testis expressed 11 involved_in IBA
ISO		 GO_REF:0000033
(PMID:18369460)		 GO_Central
RGD		 PMID:18369460 GO_REF:0000033 NCBI chr  X:69,973,012...70,236,544
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Tex19.1 testis expressed 19.1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:106,420,245...106,422,452
Ensembl chr10:106,420,139...106,422,425 		JBrowse link
G Top6bl TOP6B like initiator of meiotic double strand breaks involved_in ISO
IEA
IBA		 (PMID:26917764)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:26917764 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:201,902,564...201,989,945 JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:20711356)
MGI:3719273 (PMID:17696610)
GO_REF:0000104		 UniProt
Ensembl
GO_Central
RGD		 PMID:17696610 PMID:20711356 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:31,185,700...31,230,638
Ensembl chr 1:29,357,130...29,402,074 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO
IEA		 (PMID:28708824)
GO_REF:0000107		 RGD
Ensembl		 PMID:28708824 GO_REF:0000107 NCBI chr 9:21,480,058...21,559,936
Ensembl chr 9:13,982,329...14,062,139 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA		 (PMID:23401855)
GO_REF:0000107		 RGD
Ensembl		 PMID:23401855 GO_REF:0000107 NCBI chr 3:140,539,590...140,569,891
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:23401855)
GO_REF:0000107		 RGD
Ensembl		 PMID:23401855 GO_REF:0000107 NCBI chr20:33,369,325...33,472,243
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrob homologous recombination factor with OB-fold involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:87,705,846...87,722,635
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO
IBA		 (PMID:21659603)
GO_REF:0000033		 RGD
GO_Central		 PMID:21659603 GO_REF:0000033 NCBI chr 4:163,320,141...163,325,527
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in ISO (PMID:32640219) RGD PMID:32640219 NCBI chr 2:218,687,413...218,750,104
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in ISO
IEA		 (PMID:11031099)
GO_REF:0000107		 RGD
Ensembl		 PMID:11031099 GO_REF:0000107 NCBI chr 4:95,639,722...95,709,055
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15665856)		 UniProt
RGD		 PMID:15665856 GO_REF:0000024 NCBI chr 8:44,609,417...44,629,867
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO
ISS		 (PMID:23754376)
GO_REF:0000024		 RGD
UniProt		 PMID:23754376 GO_REF:0000024 NCBI chr14:90,573,090...90,595,342
Ensembl chr14:86,368,675...86,377,455 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO
IEA		 (PMID:24217620)
GO_REF:0000107		 RGD
Ensembl		 PMID:24217620 GO_REF:0000107 NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:20154705)		 Ensembl
UniProt
RGD		 PMID:20154705 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:190,823,447...190,830,247
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:20154705) RGD PMID:20154705 NCBI chr 4:135,010,919...135,051,844
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:23754376)
GO_REF:0000107		 RGD
Ensembl		 PMID:23754376 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA		 (PMID:23754376)
GO_REF:0000107		 RGD
Ensembl		 PMID:23754376 GO_REF:0000107 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:20154705)
GO_REF:0000024		 RGD
UniProt		 PMID:20154705 GO_REF:0000024 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
GO_REF:0000104
(PMID:18957201)		 UniProt
Ensembl
GO_Central
RGD		 PMID:18957201 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO
IEA		 (PMID:24843002)
GO_REF:0000107		 RGD
Ensembl		 PMID:24843002 GO_REF:0000107 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:19135889), (PMID:22753495) RGD PMID:19135889 PMID:22753495 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20339076)		 UniProt
Ensembl
RGD		 PMID:20339076 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,886,211...56,893,300
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
MGI:3526165 (PMID:18283110)		 GO_Central
InterPro
RGD		 PMID:18283110 GO_REF:0000002 GO_REF:0000033 NCBI chr16:65,302,049...65,362,065
Ensembl chr16:58,598,989...58,658,467 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:21,750,630...21,757,163
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor acts_upstream_of_or_within ISO
IEA		 MGI:4128102 (PMID:21211721)
GO_REF:0000107		 RGD
Ensembl		 PMID:21211721 GO_REF:0000107 NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Mir181b1 microRNA 181b-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:52,037,228...52,037,337
Ensembl chr13:49,485,688...49,485,797 		JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:43,026,666...43,026,753
Ensembl chr 3:22,616,948...22,617,035 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO
IEA		 (PMID:21518874)
GO_REF:0000107		 RGD
Ensembl		 PMID:21518874 GO_REF:0000107 NCBI chr10:63,601,990...63,638,851
Ensembl chr10:63,103,921...63,140,780 		JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO
IEA		 MGI:3696705 (PMID:16275384)
GO_REF:0000107		 RGD
Ensembl		 PMID:16275384 GO_REF:0000107 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha acts_upstream_of_or_within ISO
IEA		 MGI:3525439 (PMID:11057672)
GO_REF:0000107		 RGD
Ensembl		 PMID:11057672 GO_REF:0000107 NCBI chr19:41,014,730...41,026,740
Ensembl chr19:24,109,972...24,121,938 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3695433 (PMID:17137798)
GO_REF:0000107		 RGD
Ensembl		 PMID:17137798 GO_REF:0000107 NCBI chr18:30,516,931...30,567,199
Ensembl chr18:30,250,613...30,322,311 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25310967)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25310967 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,684,583...34,718,429
Ensembl chr12:29,063,015...29,082,480 		JBrowse link
regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
ISS		 (PMID:8756642)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8756642 GO_REF:0000024 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) RGD PMID:25597246 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Rad21 RAD21 cohesin complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:85,177,715...85,204,657
Ensembl chr 7:83,287,870...83,314,817 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:160,620,500...160,648,716
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within ISO
IEA		 MGI:5444025|MGI:5444027 (PMID:22778135)
GO_REF:0000107		 RGD
Ensembl		 PMID:22778135 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
resolution of DNA recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO
IEA		 (PMID:23543748)
GO_REF:0000107		 RGD
Ensembl		 PMID:23543748 GO_REF:0000107 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:24080495) RGD PMID:24080495 NCBI chr 6:39,666,675...39,697,480
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO
IEA		 (PMID:23543748)
GO_REF:0000107		 RGD
Ensembl		 PMID:23543748 GO_REF:0000107 NCBI chr17:6,261,961...6,269,947
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO
IEA		 (PMID:23543748)
GO_REF:0000107		 RGD
Ensembl		 PMID:23543748 GO_REF:0000107 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
resolution of meiotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,109,865...18,116,999
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 5:164,847,009...164,856,705 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,586,718...79,595,515
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:14,413,661...14,420,489
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Fancm FA complementation group M involved_in ISO
IEA		 (PMID:20347428)
GO_REF:0000107		 RGD
Ensembl		 PMID:20347428 GO_REF:0000107 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Hfm1 helicase for meiosis 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23555294)		 GO_Central
RGD		 PMID:23555294 GO_REF:0000033 NCBI chr14:3,002,103...3,108,567
Ensembl chr14:2,856,599...2,939,238 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:24068956), (PMID:24240703)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:24068956 PMID:24240703 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:14,336,869...14,369,566
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857946 (PMID:10385520), (PMID:12217320)
GO_REF:0000107		 RGD
Ensembl		 PMID:10385520 PMID:12217320 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,261,961...6,269,947
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO
IEA
IBA		 (PMID:29742103)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:29742103 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (PMID:18316482) RGD PMID:18316482 NCBI chr  X:69,973,012...70,236,544
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:11,482,089...11,542,464
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
resolution of mitotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO (PMID:24813886) RGD PMID:24813886 NCBI chr10:79,586,718...79,595,515
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 NOT|involved_in ISO (PMID:24813886) RGD PMID:24813886 NCBI chr10:14,413,661...14,420,489
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23108668) RGD PMID:23108668 NCBI chr 6:39,666,675...39,697,480
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO (PMID:24813886) RGD PMID:24813886 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IEA
IBA		 (PMID:23108668)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23108668 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
somatic cell DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Swap70 switching B-cell complex subunit SWAP70 acts_upstream_of_or_within ISO
IEA		 (PMID:9642267)
GO_REF:0000107		 RGD
Ensembl		 PMID:9642267 GO_REF:0000107 NCBI chr 1:173,702,338...173,763,540
Ensembl chr 1:164,267,609...164,328,794 		JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857946 (PMID:11828012)
GO_REF:0000107		 RGD
Ensembl		 PMID:11828012 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO
IEA		 MGI:109352|MGI:1857940|MGI:2151801|MGI:2680817 (PMID:11828012), (PMID:14563316), (PMID:14568978), (PMID:15494304), (PMID:15955838)
GO_REF:0000107		 RGD
Ensembl		 PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 acts_upstream_of_or_within ISO MGI:1858056 (PMID:15238604) RGD PMID:15238604 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO
IEA		 MGI:1858014 (PMID:15238604)
GO_REF:0000107		 RGD
Ensembl		 PMID:15238604 GO_REF:0000107 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO
IEA		 MGI:1857947 (PMID:11828012)
GO_REF:0000107		 RGD
Ensembl		 PMID:11828012 GO_REF:0000107 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Ung uracil-DNA glycosylase acts_upstream_of_or_within ISO MGI:101816|MGI:2182610 (PMID:15494304) RGD PMID:15494304 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:101816 (PMID:12743174)
GO_REF:0000107		 RGD
Ensembl		 PMID:12743174 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:101938 (PMID:12743174)		 GO_Central
Ensembl
RGD		 PMID:12743174 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO
IEA		 MGI:2663971 (PMID:12717433)
GO_REF:0000107		 RGD
Ensembl		 PMID:12717433 GO_REF:0000107 NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:98507 (PMID:9462507)
GO_REF:0000107		 RGD
Ensembl		 PMID:9462507 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:10911993) RGD PMID:10911993 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO
IEA		 MGI:2383951 (PMID:9768755)
GO_REF:0000107		 RGD
Ensembl		 PMID:9768755 GO_REF:0000107 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:96770 (PMID:9462507) RGD PMID:9462507 NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q13207 (PMID:21076401)		 Ensembl
RGD		 PMID:21076401 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IEA
ISS		 (PMID:17589526)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17589526 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:92,825,568...93,071,037
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 UniProtKB:P02340 (PMID:21076401)
GO_REF:0000107		 RGD
Ensembl		 PMID:21076401 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO
IEA		 UniProtKB:P02340 (PMID:21076401)
GO_REF:0000107		 RGD
Ensembl		 PMID:21076401 GO_REF:0000107 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:15109494) RGD PMID:15109494 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:17589526) RGD PMID:17589526 NCBI chr 1:230,195,894...230,265,677
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in ISO
IEA		 (PMID:17589526)
GO_REF:0000107		 RGD
Ensembl		 PMID:17589526 GO_REF:0000107 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Tep1 telomerase associated protein 1 involved_in ISO
IBA
IEA		 (PMID:10810353)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10810353 GO_REF:0000033 GO_REF:0000107 NCBI chr15:26,519,429...26,567,073
Ensembl chr15:24,045,878...24,093,526 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IEA
IBA		 (PMID:15507207)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15507207 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
telomeric DNA-containing double minutes formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO
IEA		 (PMID:14690602)
GO_REF:0000107		 RGD
Ensembl		 PMID:14690602 GO_REF:0000107 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (PMID:23836881) RGD PMID:23836881 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:22157821) RGD PMID:22157821 NCBI chr 8:116,344,927...116,419,329
Ensembl chr 8:107,474,312...107,540,627 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO (PMID:23836881) RGD PMID:23836881 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9166431) RGD PMID:9166431 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Lig1 DNA ligase 1 NOT|involved_in ISO (PMID:9809069) RGD PMID:9809069 NCBI chr 1:83,243,043...83,281,707
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 NOT|involved_in ISO (PMID:9809069) RGD PMID:9809069 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:9809069)
MGI:1857732 (PMID:10716994), (PMID:15194694)		 RGD PMID:9809069 PMID:10716994 PMID:15194694 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO
IEA		 MGI:107202 (PMID:23836881)
GO_REF:0000107		 RGD
Ensembl		 PMID:23836881 GO_REF:0000107 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rag1 recombination activating 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:14670978)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:10601033), (PMID:1547488), (PMID:20122409), (PMID:8284210)
MGI:97849 (PMID:2360047)
GO_REF:0000033		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:1547488 PMID:2360047 PMID:8284210 PMID:10601033 PMID:14670978 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rag2 recombination activating 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:1547488), (PMID:18033247)
MGI:97848 (PMID:2360047)		 GO_Central
Ensembl
RGD		 PMID:1547488 PMID:2360047 PMID:18033247 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:10716994), (PMID:15194694) RGD PMID:10716994 PMID:15194694 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO MGI:2179954 (PMID:10716994) RGD PMID:10716994 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        macromolecule metabolic process 10018
          nucleic acid metabolic process 5284
            DNA metabolic process 977
              DNA recombination 340
                DNA strand displacement + 1
                DNA strand invasion + 6
                DNA transposition + 1
                RNA-mediated DNA recombination 0
                homologous recombination + 57
                intrachromosomal DNA recombination 0
                intron homing + 0
                meiotic heteroduplex formation 0
                mitochondrion DNA recombination 0
                mitotic recombination + 27
                negative regulation of DNA recombination + 53
                plasmid recombination 0
                positive regulation of DNA recombination + 78
                recombination within rDNA repeats 0
                recombinational repair + 182
                regulation of DNA recombination + 141
                resolution of DNA recombination intermediates + 9
                somatic cell DNA recombination + 80
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        primary metabolic process 10763
          nucleobase-containing compound metabolic process 5900
            nucleic acid metabolic process 5284
              DNA metabolic process 977
                DNA recombination 340
                  DNA strand displacement + 1
                  DNA strand invasion + 6
                  DNA transposition + 1
                  RNA-mediated DNA recombination 0
                  homologous recombination + 57
                  intrachromosomal DNA recombination 0
                  intron homing + 0
                  meiotic heteroduplex formation 0
                  mitochondrion DNA recombination 0
                  mitotic recombination + 27
                  negative regulation of DNA recombination + 53
                  plasmid recombination 0
                  positive regulation of DNA recombination + 78
                  recombination within rDNA repeats 0
                  recombinational repair + 182
                  regulation of DNA recombination + 141
                  resolution of DNA recombination intermediates + 9
                  somatic cell DNA recombination + 80
paths to the root