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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA dealkylation involved in DNA repair
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Accession:GO:0006307 term browser browse the term
Definition:The repair of alkylation damage, e.g. the removal of the alkyl group at the O6-position of guanine by O6-alkylguanine-DNA alkyltransferase (AGT).


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DNA dealkylation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:18603530) RGD PMID:18603530 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase involved_in ISO
IBA		 (PMID:18432238), (PMID:20714506)
(MGI:3796299|PMID:18519673)
PMID:21873635		 RGD PMID:18432238 PMID:18519673 PMID:20714506 PMID:21873635 MGI:3796299, RGD:13792537 NCBI chr12:42,494,187...42,500,929
Ensembl chr12:42,496,300...42,500,914 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:16858410), (PMID:20714506), (PMID:22055184)
GO_REF:0000002		 UniProt
RGD
InterPro		 PMID:16858410 PMID:20714506 PMID:22055184 GO_REF:0000002 GO_REF:0000024 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ascc1 activating signal cointegrator 1 complex subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:27,941,053...28,031,272
Ensembl chr20:27,941,283...28,031,272 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISO
ISS		 (PMID:22055184)
GO_REF:0000024		 RGD
UniProt		 PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18775698), (PMID:20376003)
GO_REF:0000107
(MGI:3817348|PMID:18775698)		 UniProt
RGD
Ensembl		 PMID:18775698 PMID:20376003 GO_REF:0000024 GO_REF:0000107 MGI:3817348 NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within IDA
ISO		 (MGI:50172|PMID:1554415) RGD PMID:1554415 PMID:15025514 MGI:50172, RGD:2316914 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    response to stimulus 10408
      cellular response to stimulus 8778
        cellular response to stress 2097
          DNA damage response 830
            DNA repair 525
              DNA dealkylation involved in DNA repair 7
Path 2
Term Annotations click to browse term
  biological_process 19553
    cellular process 18233
      cellular metabolic process 10124
        cellular aromatic compound metabolic process 5773
          nucleobase-containing compound metabolic process 5539
            nucleic acid metabolic process 4966
              DNA metabolic process 993
                DNA modification 91
                  DNA dealkylation 30
                    DNA dealkylation involved in DNA repair 7
paths to the root