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ONTOLOGY REPORT - ANNOTATIONS

Term:double-strand break repair
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Accession:GO:0006302 term browser browse the term
Definition:The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
Comment:Note that the processes of nuclear double-strand break repair and mitochondrial double-strand break repair are genetically separable (PMID:22214610). To annotate gene products involved in mitochondrial double-strand break repair, please use GO:0097551 'mitochondrial double-strand break repair'.


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double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 BRCA1 A complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,952,668...100,968,816
Ensembl chr 5:100,953,058...100,968,831 		JBrowse link
G Actr5 ARP5 actin-related protein 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:158,466,800...158,481,131
Ensembl chr 2:158,466,808...158,481,131 		JBrowse link
G Actr8 ARP8 actin-related protein 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:29,700,294...29,717,409
Ensembl chr14:29,700,294...29,728,311 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in IMP (MGI:3698695|PMID:17121854) UniProt PMID:17121854 MGI:3698695 NCBI chr 7:105,207,691...105,231,151
Ensembl chr 7:105,207,690...105,230,860 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:21211721) MGI
GO_Central		 PMID:21211721 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:87,605,407...87,649,244
Ensembl chr 6:87,605,406...87,649,175 		JBrowse link
G Atm ataxia telangiectasia mutated involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Atr ataxia telangiectasia and Rad3 related involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:95,739,655...95,834,813
Ensembl chr 9:95,739,650...95,833,834 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:71,848,809...71,857,416
Ensembl chr 8:71,849,505...71,857,263 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:31,855,394...32,242,083
Ensembl chr 5:31,855,028...32,242,306 		JBrowse link
G Brca1 breast cancer 1, early onset involved_in IMP
ISO		 (MGI:5545964|PMID:22186889) CACAO
MGI		 PMID:22186889 GO_REF:0000119 MGI:4834177 MGI:5545964 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Brca2 breast cancer 2, early onset involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:9398843)
(PMID:17476307)		 MGI PMID:9398843 PMID:17476307 GO_REF:0000119 MGI:4834177 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:74,460,234...74,499,307
Ensembl chr  X:74,460,234...74,497,607 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:108,534,905...108,536,021
Ensembl chr10:108,534,625...108,536,021 		JBrowse link
G Cdca5 cell division cycle associated 5 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:6,135,127...6,141,803
Ensembl chr19:6,135,013...6,141,807 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:110,987,668...111,022,006
Ensembl chr 5:110,987,845...111,022,011 		JBrowse link
G Csnk2a1 casein kinase 2, alpha 1 polypeptide involved_in ISO (PMID:22325354) UniProt PMID:22325354 NCBI chr 2:152,068,468...152,123,772
Ensembl chr 2:152,068,759...152,123,772 		JBrowse link
G Csnk2a2 casein kinase 2, alpha prime polypeptide involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:96,172,724...96,215,505
Ensembl chr 8:96,172,724...96,216,667 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within IMP (PMID:12615897) MGI PMID:12615897 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167 		JBrowse link
G Ddx1 DEAD box helicase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:13,269,308...13,299,175
Ensembl chr12:13,266,974...13,299,214 		JBrowse link
G Dtx3l deltex 3-like, E3 ubiquitin ligase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:35,746,885...35,759,397
Ensembl chr16:35,746,881...35,759,521 		JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:94,535,798...94,544,611
Ensembl chr11:94,535,822...94,544,790 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:25,111,126...25,114,061
Ensembl chr17:25,107,460...25,114,061 		JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 NOT|acts_upstream_of_or_within IMP (PMID:11707424)
(PMID:15199134)
(PMID:17912366)		 MGI PMID:11707424 PMID:15199134 PMID:17912366 NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 acts_upstream_of_or_within IMP (PMID:22614755) MGI PMID:22614755 NCBI chr14:66,056,476...66,071,418
Ensembl chr14:66,056,487...66,071,443 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:80,509,869...80,544,909
Ensembl chr12:80,509,869...80,547,001 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:132,366,303...132,452,076
Ensembl chr 4:132,366,298...132,452,076 		JBrowse link
G Ggn gametogenetin acts_upstream_of_or_within IMP (PMID:23451117) MGI PMID:23451117 NCBI chr 7:28,869,635...28,873,363
Ensembl chr 7:28,869,635...28,873,401 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:61,342,533...61,360,615
Ensembl chr 8:61,343,452...61,361,705 		JBrowse link
G Ino80 INO80 complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Lig3 ligase III, DNA, ATP-dependent involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:82,671,977...82,695,100
Ensembl chr11:82,671,934...82,695,100 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent involved_in
acts_upstream_of_or_within		 ISO
IGI
IMP		 (PMID:15175260)
(PMID:12531011), (PMID:15175260)
(PMID:17554302)		 MGI PMID:12531011 PMID:15175260 PMID:17554302 GO_REF:0000119 MGI:4834177 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Marf1 meiosis regulator and mRNA stability 1 acts_upstream_of_or_within IMP (PMID:23090997) MGI PMID:23090997 NCBI chr16:13,927,030...13,977,157
Ensembl chr16:13,927,037...13,981,215 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IMP (MGI:5770021|PMID:26742488) UniProt PMID:26742488 MGI:5770021 NCBI chr11:102,556,177...102,573,066
Ensembl chr11:102,554,542...102,573,063 		JBrowse link
G Mpnd MPN domain containing involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:56,316,201...56,323,790
Ensembl chr17:56,312,711...56,323,790 		JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:17291760) MGI PMID:17291760 GO_REF:0000119 MGI:4834177 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within IMP (PMID:17912366) MGI PMID:17912366 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Mta1 metastasis associated 1 involved_in IMP
IBA
ISO		 (MGI:4366101|PMID:19805145) UniProt
GO_Central
MGI		 PMID:19805145 GO_REF:0000033 GO_REF:0000119 MGI:4366101 MGI:4834177 NCBI chr12:113,061,830...113,100,826
Ensembl chr12:113,061,898...113,100,826 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,532,589...5,538,461
Ensembl chr19:5,532,373...5,538,430 		JBrowse link
G Nbn nibrin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:75,006,505...75,101,870
Ensembl chr 1:75,006,298...75,101,844 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IGI		 (PMID:21270334) MGI
GO_Central		 PMID:21270334 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase family, member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:51,045,347...51,058,758
Ensembl chr14:51,045,298...51,058,758 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 acts_upstream_of_or_within
involved_in		 ISO
IBA
IGI		 (PMID:21270334) MGI
GO_Central		 PMID:21270334 GO_REF:0000008 GO_REF:0000033 NCBI chr 9:106,347,521...106,354,148
Ensembl chr 9:106,347,521...106,354,148 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:35,759,360...35,792,975
Ensembl chr16:35,758,840...35,792,975 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096 		JBrowse link
G Poln DNA polymerase N involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:34,164,523...34,326,870
Ensembl chr 5:34,164,523...34,326,792 		JBrowse link
G Polq polymerase (DNA directed), theta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:36,832,104...36,922,321
Ensembl chr16:36,832,148...36,915,779 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:11751629)
(PMID:12604618)		 MGI
GO_Central		 PMID:11751629 PMID:12604618 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Rad21l RAD21-like (S. pombe) acts_upstream_of_or_within IMP (PMID:21743440) MGI PMID:21743440 NCBI chr 2:151,486,286...151,512,542
Ensembl chr 2:151,487,324...151,510,453 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:53,540,346...53,598,146
Ensembl chr11:53,540,346...53,598,146 		JBrowse link
G Rad54l RAD54 like (S. cerevisiae) acts_upstream_of_or_within IGI (PMID:15175260) MGI PMID:15175260 NCBI chr 4:115,951,458...115,980,875
Ensembl chr 4:115,951,461...115,980,887 		JBrowse link
G Rec8 REC8 meiotic recombination protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:55,855,459...55,862,852
Ensembl chr14:55,855,494...55,862,852 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252 		JBrowse link
G Rnf169 ring finger protein 169 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:99,569,461...99,630,537
Ensembl chr 7:99,569,461...99,629,655 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965 		JBrowse link
G Setx senataxin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:29,013,600...29,072,483
Ensembl chr 2:29,014,193...29,072,483 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:11,315,887...11,369,786
Ensembl chr12:11,315,887...11,369,786 		JBrowse link
G Smchd1 SMC hinge domain containing 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:99,850,767...99,921,482
Ensembl chr12:99,850,776...99,921,478 		JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:25,015,642...25,026,136
Ensembl chr13:25,015,662...25,026,136 		JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:84,878,356...84,903,392
Ensembl chr 2:84,878,366...84,903,392 		JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 IMP (MGI:4821667|PMID:20711356)
(PMID:17696610)		 UniProt
MGI		 PMID:17696610 PMID:20711356 MGI:4821667 NCBI chr13:74,060,577...74,085,855
Ensembl chr13:74,059,466...74,085,903 		JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IMP (PMID:17912366) MGI PMID:17912366 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:55,175,693...55,248,176
Ensembl chr13:55,175,693...55,248,113 		JBrowse link
G Vcp valosin containing protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:42,979,964...43,000,507
Ensembl chr 4:42,979,963...43,000,507 		JBrowse link
G Wrn Werner syndrome RecQ like helicase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555 		JBrowse link
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:11751629), (PMID:9875844) MGI PMID:9875844 PMID:11751629 GO_REF:0000119 MGI:4834177 NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727 		JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (PMID:12531011) MGI PMID:12531011 GO_REF:0000119 MGI:4834177 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111 		JBrowse link
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 acts_upstream_of_or_within IMP (PMID:11751629) MGI PMID:11751629 NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ataxia telangiectasia mutated involved_in ISO (PMID:10802669), (PMID:26240375) UniProt PMID:10802669 PMID:26240375 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Blm Bloom syndrome, RecQ like helicase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:80,104,839...80,184,896
Ensembl chr 7:80,104,481...80,184,867 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:62,782,762...62,809,967
Ensembl chr10:62,782,805...62,809,964 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:80,509,869...80,544,909
Ensembl chr12:80,509,869...80,547,001 		JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in NAS
ISO		 (MGI:6869990|PMID:26512707) ComplexPortal
MGI		 PMID:26512707 GO_REF:0000119 MGI:4834177 MGI:6869990 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419 		JBrowse link
G Nbn nibrin involved_in NAS
ISO		 (MGI:6869990|PMID:26512707) ComplexPortal
MGI		 PMID:26512707 GO_REF:0000119 MGI:4834177 MGI:6869990 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in NAS
ISO		 (MGI:6869990|PMID:26512707) ComplexPortal
MGI		 PMID:26512707 GO_REF:0000119 MGI:4834177 MGI:6869990 NCBI chr11:53,540,346...53,598,146
Ensembl chr11:53,540,346...53,598,146 		JBrowse link
G Setmar SET domain without mariner transposase fusion involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:108,042,006...108,054,088
Ensembl chr 6:108,042,006...108,054,083 		JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:65,019,577...65,093,045
Ensembl chr 6:65,019,567...65,093,045 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519 		JBrowse link
G Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,368,850...15,412,382
Ensembl chr16:15,369,941...15,413,637 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IMP
ISO		 (MGI:5619739|PMID:22912580)
(PMID:19506022)		 CACAO
MGI		 PMID:19506022 PMID:22912580 MGI:5619739 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789 		JBrowse link
G Rbbp8 retinoblastoma binding protein 8, endonuclease involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:11,766,333...11,876,264
Ensembl chr18:11,766,333...11,878,278 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:21,134,202...21,161,281
Ensembl chr18:21,134,398...21,161,281 		JBrowse link
G Rnf138rt1 ring finger protein 138, retrogene 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:162,543,135...162,544,328
Ensembl chr  X:162,543,135...162,544,325 		JBrowse link
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) involved_in ISO (PMID:19595721) UniProt PMID:19595721 NCBI chr 7:126,288,099...126,294,955
Ensembl chr 7:126,288,640...126,294,956 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:3,796,969...3,821,708
Ensembl chr16:3,796,969...3,821,634 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:79,445,698...79,489,362
Ensembl chr15:79,445,698...79,489,310 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting protein C-terminal helicase 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:26490168) GO_Central
MGI		 PMID:26490168 GO_REF:0000033 NCBI chr11:85,948,957...86,092,041
Ensembl chr11:85,948,964...86,092,019 		JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in IDA (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6448646|PMID:32460033) UniProt PMID:32345962 PMID:32460033 PMID:32463460 MGI:6443349 MGI:6447091 MGI:6448646 NCBI chr 8:84,874,637...84,899,220
Ensembl chr 8:84,874,654...84,899,219 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IDA (PMID:17639081) UniProt PMID:17639081 NCBI chr15:79,445,698...79,489,362
Ensembl chr15:79,445,698...79,489,310 		JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:113,508,622...113,573,981
Ensembl chr 6:113,508,643...113,573,978 		JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in IDA (MGI:6283956|PMID:30760716), (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6456264|PMID:31242413) UniProt PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 MGI:6283956 MGI:6443349 MGI:6447091 MGI:6456264 NCBI chr17:32,163,743...32,253,869
Ensembl chr17:32,163,743...32,255,323 		JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within IGI (PMID:30718482) MGI PMID:30718482 NCBI chr19:6,234,358...6,274,349
Ensembl chr19:6,234,418...6,274,255 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within IMP
IGI		 (PMID:27760146) MGI PMID:27760146 NCBI chr 1:9,978,863...10,011,179
Ensembl chr 1:9,978,863...10,012,310 		JBrowse link
G Morc2b microrchidia 2B involved_in IMP (MGI:6115697|PMID:29329290) UniProt PMID:29329290 MGI:6115697 NCBI chr17:33,354,562...33,369,473
Ensembl chr17:33,332,325...33,358,657 		JBrowse link
G Prdm9 PR domain containing 9 involved_in IMP (MGI:6102131|PMID:25894966), (MGI:6114980|PMID:29478809) UniProt PMID:25894966 PMID:29478809 MGI:6102131 MGI:6114980 NCBI chr17:15,763,334...15,784,636
Ensembl chr17:15,763,341...15,784,616 		JBrowse link
G Rad51 RAD51 recombinase involved_in IDA (PMID:15834424) UniProt PMID:15834424 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926 		JBrowse link
G Spo11 SPO11 initiator of meiotic double stranded breaks acts_upstream_of_or_within IGI (PMID:27760146) MGI PMID:27760146 NCBI chr 2:172,819,172...172,835,369
Ensembl chr 2:172,819,493...172,835,369 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within IGI (PMID:30718482) MGI PMID:30718482 NCBI chr 8:105,173,350...105,236,692
Ensembl chr 8:105,173,351...105,236,542 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within IMP
IGI		 (PMID:30718482) MGI PMID:30718482 NCBI chr 2:122,016,753...122,036,874
Ensembl chr 2:122,016,753...122,036,878 		JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464 		JBrowse link
G Hmces 5-hydroxymethylcytosine (hmC) binding, ES cell specific involved_in IDA (MGI:6393148|PMID:31806351) UniProt PMID:31806351 MGI:6393148 NCBI chr 6:87,890,889...87,913,603
Ensembl chr 6:87,890,917...87,913,611 		JBrowse link
G Lig3 ligase III, DNA, ATP-dependent involved_in IMP
ISO		 (MGI:5014103|PMID:21655080) BHF-UCL
MGI		 PMID:21655080 GO_REF:0000119 MGI:4834177 MGI:5014103 NCBI chr11:82,671,977...82,695,100
Ensembl chr11:82,671,934...82,695,100 		JBrowse link
G Nbn nibrin involved_in ISO
IDA		 (MGI:6269043|PMID:28216226) MGI
UniProt		 PMID:28216226 GO_REF:0000119 MGI:4834177 MGI:6269043 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096 		JBrowse link
G Polq polymerase (DNA directed), theta involved_in IDA
IBA
ISO		 (MGI:5621198|PMID:25642960), (MGI:6869820|PMID:29058711) UniProt
GO_Central
MGI		 PMID:25642960 PMID:29058711 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5621198 MGI:6869820 NCBI chr16:36,832,104...36,922,321
Ensembl chr16:36,832,148...36,915,779 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:128,333,962...128,339,876
Ensembl chr 6:128,333,963...128,339,874 		JBrowse link
G Topbp1 topoisomerase (DNA) II binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:103,182,351...103,227,627
Ensembl chr 9:103,182,414...103,227,627 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc45 cell division cycle 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:18,599,202...18,632,371
Ensembl chr16:18,599,197...18,630,737 		JBrowse link
G Cdc7 cell division cycle 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:107,112,201...107,132,298
Ensembl chr 5:107,112,188...107,132,298 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:121,308,005...121,315,814
Ensembl chr 8:121,305,372...121,316,043 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:23,716,626...23,727,684
Ensembl chr 8:23,716,632...23,727,675 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:88,860,456...88,875,762
Ensembl chr 6:88,860,456...88,875,762 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:20,873,188...20,890,536
Ensembl chr 1:20,873,192...20,890,536 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:15,441,761...15,455,264
Ensembl chr16:15,441,761...15,455,264 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:75,836,096...75,855,067
Ensembl chr 8:75,836,197...75,855,067 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:128,259,312...128,287,442
Ensembl chr 1:128,259,327...128,287,401 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:138,162,845...138,170,675
Ensembl chr 5:138,162,845...138,170,684 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:9,978,863...10,011,179
Ensembl chr 1:9,978,863...10,012,310 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:5,532,589...5,538,461
Ensembl chr19:5,532,373...5,538,430 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947 		JBrowse link
G Ercc8 excision repaiross-complementing rodent repair deficiency, complementation group 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:108,295,246...108,337,738
Ensembl chr13:108,295,265...108,331,898 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252 		JBrowse link
G Topbp1 topoisomerase (DNA) II binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:103,182,351...103,227,627
Ensembl chr 9:103,182,414...103,227,627 		JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888 		JBrowse link
G Uvrag UV radiation resistance associated gene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:98,535,949...98,790,373
Ensembl chr 7:98,534,228...98,790,348 		JBrowse link
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IDA (MGI:5702356|PMID:26446488) UniProt PMID:26446488 MGI:5702356 NCBI chr10:80,971,113...80,988,056
Ensembl chr10:80,971,054...80,988,829 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:71,858,630...71,868,475
Ensembl chr 8:71,858,654...71,862,548 		JBrowse link
G Ap5s1 adaptor-related protein 5 complex, sigma 1 subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:131,052,280...131,055,434
Ensembl chr 2:131,048,998...131,055,434 		JBrowse link
G Ap5z1 adaptor-related protein complex 5, zeta 1 subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:142,448,960...142,464,471
Ensembl chr 5:142,449,699...142,464,465 		JBrowse link
G Atm ataxia telangiectasia mutated acts_upstream_of_or_within
involved_in		 IMP
ISO		 (PMID:19061978)
(PMID:10802669)		 MGI
UniProt		 PMID:10802669 PMID:19061978 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Aunip aurora kinase A and ninein interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,238,310...134,251,233
Ensembl chr 4:134,238,310...134,251,238 		JBrowse link
G Blm Bloom syndrome, RecQ like helicase involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:80,104,839...80,184,896
Ensembl chr 7:80,104,481...80,184,867 		JBrowse link
G Brca1 breast cancer 1, early onset involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Brca2 breast cancer 2, early onset involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:15485900) MGI
GO_Central		 PMID:15485900 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:125,073,144...125,107,554
Ensembl chr 6:125,072,944...125,107,554 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IDA (PMID:17639081) UniProt PMID:17639081 NCBI chr15:79,445,698...79,489,362
Ensembl chr15:79,445,698...79,489,310 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108 		JBrowse link
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:12,927,600...12,969,873
Ensembl chr16:12,927,548...12,968,481 		JBrowse link
G Ercc5 excision repair cross-complementing rodent repair deficiency, complementation group 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:44,184,084...44,220,399
Ensembl chr 1:44,186,904...44,220,420 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:80,509,869...80,544,909
Ensembl chr12:80,509,869...80,547,001 		JBrowse link
G Fan1 FANCD2/FANCI-associated nuclease 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:63,994,627...64,023,874
Ensembl chr 7:63,996,506...64,023,843 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:11,747,384...11,782,396
Ensembl chr 2:11,747,384...11,782,393 		JBrowse link
G Gen1 GEN1, Holliday junction 5' flap endonuclease involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:11,288,929...11,316,030
Ensembl chr12:11,288,921...11,315,802 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within IMP (PMID:11934988) MGI PMID:11934988 NCBI chr 9:44,246,012...44,247,374
Ensembl chr 9:44,245,991...44,247,374 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464 		JBrowse link
G Htatsf1 HIV TAT specific factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:56,098,930...56,112,543
Ensembl chr  X:56,098,943...56,112,543 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IDA
IBA		 (MGI:3690191|PMID:16278671) UniProt
GO_Central		 PMID:16278671 GO_REF:0000033 MGI:3690191 NCBI chr11:8,943,137...8,961,240
Ensembl chr11:8,943,137...8,961,191 		JBrowse link
G Hus1b HUS1 checkpoint clamp component B involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:31,130,559...31,131,744
Ensembl chr13:31,130,556...31,131,742 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:59,769,637...59,783,855
Ensembl chr 4:59,769,637...59,801,589 		JBrowse link
G Ino80 INO80 complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:90,298,691...90,340,800
Ensembl chr 3:90,298,695...90,340,929 		JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within IMP (PMID:24062341) MGI PMID:24062341 NCBI chr 7:44,833,043...44,854,344
Ensembl chr 7:44,833,048...44,854,316 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in IMP
IBA
ISO		 (MGI:6446379|PMID:30297459) UniProt
GO_Central
MGI		 PMID:30297459 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6446379 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Kdm4d lysine (K)-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr 9:14,373,844...14,411,818
Ensembl chr 9:14,373,844...14,411,778 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:93,776,635...93,837,815
Ensembl chr11:93,776,678...93,837,811 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in IMP
IBA
ISO		 (MGI:5437561|PMID:22771120) UniProt
GO_Central
MGI		 PMID:22771120 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5437561 NCBI chr 2:132,658,061...132,686,117
Ensembl chr 2:132,658,061...132,686,117 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in IMP
IBA
ISO		 (MGI:5437561|PMID:22771120), (MGI:5525985|PMID:23401855) UniProt
GO_Central
MGI		 PMID:22771120 PMID:23401855 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5437561 MGI:5525985 NCBI chr10:53,412,411...53,507,251
Ensembl chr10:53,412,411...53,506,535 		JBrowse link
G Meiob meiosis specific with OB domains involved_in IMP (MGI:5527015|PMID:24068956), (MGI:5538413|PMID:24240703) UniProt PMID:24068956 PMID:24240703 MGI:5527015 MGI:5538413 NCBI chr17:25,023,275...25,058,762
Ensembl chr17:25,023,263...25,058,762 		JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:24,496,451...24,602,950
Ensembl chr 4:24,496,451...24,602,950 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:89,973,722...89,996,873
Ensembl chr 9:89,973,718...89,996,827 		JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in ISO
IBA
IMP		 (MGI:3839734|PMID:18854157) MGI
GO_Central
UniProt		 PMID:18854157 GO_REF:0000033 GO_REF:0000119 MGI:3839734 MGI:4834177 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:51,504,127...51,517,634
Ensembl chr 1:51,505,021...51,517,584 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:128,237,263...128,247,426
Ensembl chr10:128,237,264...128,247,361 		JBrowse link
G Nbn nibrin involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:125,066,816...125,090,615
Ensembl chr 7:125,066,812...125,090,768 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:59,246,047...59,473,538
Ensembl chr15:59,246,096...59,473,533 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:131,838,196...131,864,059
Ensembl chr 1:131,838,272...131,864,059 		JBrowse link
G Palb2 partner and localizer of BRCA2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:121,706,485...121,732,203
Ensembl chr 7:121,706,485...121,732,208 		JBrowse link
G Pogz pogo transposable element with ZNF domain acts_upstream_of_or_within_positive_effect ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:94,730,289...94,790,888
Ensembl chr 3:94,744,878...94,789,637 		JBrowse link
G Poll polymerase (DNA directed), lambda involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:45,540,714...45,549,025
Ensembl chr19:45,540,714...45,548,970 		JBrowse link
G Poln DNA polymerase N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:34,164,523...34,326,870
Ensembl chr 5:34,164,523...34,326,792 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668 		JBrowse link
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:61,542,038...61,630,720
Ensembl chr 2:61,542,038...61,630,720 		JBrowse link
G Rad21l RAD21-like (S. pombe) acts_upstream_of_or_within IGI (PMID:22711701) MGI PMID:22711701 NCBI chr 2:151,486,286...151,512,542
Ensembl chr 2:151,487,324...151,510,453 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:53,540,346...53,598,146
Ensembl chr11:53,540,346...53,598,146 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 ISO
IMP
IDA		 (PMID:15485900)
(PMID:15359272)
(PMID:15834424)
(PMID:16428451)		 RGD
MGI
UniProt		 PMID:14755242 PMID:15359272 PMID:15485900 PMID:15834424 PMID:16428451 GO_REF:0000119 MGI:4834177 RGD:9831188 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550 		JBrowse link
G Rad51b RAD51 paralog B involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:79,344,032...79,895,034
Ensembl chr12:79,344,056...79,861,464 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:87,267,471...87,295,780
Ensembl chr11:87,267,471...87,295,780 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:82,762,786...82,781,571
Ensembl chr11:82,767,260...82,781,440 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:12379650) MGI
GO_Central		 PMID:12379650 GO_REF:0000033 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789 		JBrowse link
G Rad54b RAD54 homolog B (S. cerevisiae) acts_upstream_of_or_within
involved_in		 IGI
ISO
IMP
IBA		 (PMID:16428451)
(PMID:19061978)		 MGI
GO_Central		 PMID:16428451 PMID:19061978 GO_REF:0000033 NCBI chr 4:11,558,930...11,615,806
Ensembl chr 4:11,558,922...11,615,805 		JBrowse link
G Rad54l RAD54 like (S. cerevisiae) acts_upstream_of_or_within IMP
IGI		 (PMID:19061978)
(PMID:16428451)		 MGI PMID:16428451 PMID:19061978 NCBI chr 4:115,951,458...115,980,875
Ensembl chr 4:115,951,461...115,980,887 		JBrowse link
G Rbbp8 retinoblastoma binding protein 8, endonuclease involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:11,766,333...11,876,264
Ensembl chr18:11,766,333...11,878,278 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within IGI (PMID:22711701) MGI PMID:22711701 NCBI chr14:55,855,459...55,862,852
Ensembl chr14:55,855,494...55,862,852 		JBrowse link
G Recql RecQ protein-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:142,296,068...142,332,802
Ensembl chr 6:142,296,068...142,332,813 		JBrowse link
G Recql4 RecQ protein-like 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:76,587,753...76,594,820
Ensembl chr15:76,587,753...76,594,748 		JBrowse link
G Recql5 RecQ protein-like 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:115,783,421...115,824,339
Ensembl chr11:115,783,421...115,824,303 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:39,607,557...39,751,207
Ensembl chr10:39,608,114...39,751,207 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:111,997,576...112,026,854
Ensembl chr 8:111,997,576...112,026,854 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:58,550,062...58,558,963
Ensembl chr13:58,550,062...58,558,962 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:10,652,923...10,661,099
Ensembl chr16:10,652,923...10,710,830 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:21,134,202...21,161,281
Ensembl chr18:21,134,398...21,161,281 		JBrowse link
G Rnf138rt1 ring finger protein 138, retrogene 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:162,543,135...162,544,328
Ensembl chr  X:162,543,135...162,544,325 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:99,569,461...99,630,537
Ensembl chr 7:99,569,461...99,629,655 		JBrowse link
G Rpa1 replication protein A1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:15470499) MGI
GO_Central		 PMID:15470499 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:75,191,085...75,239,478
Ensembl chr11:75,188,992...75,239,150 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:132,495,671...132,506,057
Ensembl chr 4:132,495,643...132,506,063 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:8,255,936...8,259,141
Ensembl chr 6:8,255,936...8,259,173 		JBrowse link
G Samhd1 SAM domain and HD domain, 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:156,939,454...156,977,016
Ensembl chr 2:156,939,453...156,977,185 		JBrowse link
G Sem1 SEM1, 26S proteasome complex subunit acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:15359272) MGI
GO_Central		 PMID:15359272 GO_REF:0000033 NCBI chr 6:6,558,275...6,578,658
Ensembl chr 6:6,557,294...6,578,663 		JBrowse link
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) acts_upstream_of_or_within ISO (PMID:20813759) MGI PMID:20813759 NCBI chr 4:126,914,504...126,944,894
Ensembl chr 4:126,915,117...126,930,806 		JBrowse link
G Sfr1 SWI5 dependent recombination repair 1 involved_in IMP
IBA
ISO		 (MGI:4868525|PMID:20976249) UniProt
GO_Central
MGI		 PMID:20976249 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4868525 NCBI chr19:47,720,159...47,724,027
Ensembl chr19:47,720,121...47,724,027 		JBrowse link
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:126,288,099...126,294,955
Ensembl chr 7:126,288,640...126,294,956 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:3,796,969...3,821,708
Ensembl chr16:3,796,969...3,821,634 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:23,183,817...23,251,286
Ensembl chr19:23,183,815...23,251,261 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:11,315,887...11,369,786
Ensembl chr12:11,315,887...11,369,786 		JBrowse link
G Spidr scaffolding protein involved in DNA repair involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715 		JBrowse link
G Swi5 SWI5 recombination repair homolog (yeast) involved_in IMP
IBA
ISO		 (MGI:4868525|PMID:20976249) UniProt
GO_Central
MGI		 PMID:20976249 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4868525 NCBI chr 2:32,168,817...32,178,154
Ensembl chr 2:32,168,828...32,178,087 		JBrowse link
G Swsap1 SWIM type zinc finger 7 associated protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:21,867,049...21,869,566
Ensembl chr 9:21,867,051...21,869,560 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:76,510,437...76,524,129
Ensembl chr15:76,510,202...76,524,158 		JBrowse link
G Top3a topoisomerase (DNA) III alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:60,629,014...60,668,099
Ensembl chr11:60,630,884...60,668,191 		JBrowse link
G Topbp1 topoisomerase (DNA) II binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:103,182,351...103,227,627
Ensembl chr 9:103,182,414...103,227,627 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519 		JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:24001775) MGI
GO_Central		 PMID:24001775 GO_REF:0000033 NCBI chr 9:119,723,961...119,755,652
Ensembl chr 9:119,723,944...119,755,653 		JBrowse link
G Wrn Werner syndrome RecQ like helicase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555 		JBrowse link
G Xrcc2 X-ray repair complementing defective repair in Chinese hamster cells 2 involved_in
acts_upstream_of_or_within		 ISO
IMP
IBA		 (PMID:16777961) MGI
GO_Central		 PMID:16777961 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:25,894,812...25,910,795
Ensembl chr 5:25,894,810...25,910,823 		JBrowse link
G Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:111,769,626...111,780,326
Ensembl chr12:111,769,626...111,780,307 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074 		JBrowse link
G Zfyve26 zinc finger, FYVE domain containing 26 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:79,279,120...79,343,102
Ensembl chr12:79,279,120...79,343,078 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:165,626,072...165,740,896
Ensembl chr 2:165,626,072...165,740,936 		JBrowse link
G Zswim7 zinc finger SWIM-type containing 7 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:62,158,050...62,172,221
Ensembl chr11:62,158,050...62,172,201 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:87,605,407...87,649,244
Ensembl chr 6:87,605,406...87,649,175 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in IMP
IBA
ISO		 (MGI:6202149|PMID:30017584) UniProt
GO_Central
MGI		 PMID:30017584 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6202149 NCBI chr 6:34,848,706...34,855,024
Ensembl chr 6:34,848,706...34,854,995 		JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:56,517,593...56,536,716
Ensembl chr19:56,517,599...56,536,675 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:103,707,921...103,716,703
Ensembl chr 3:103,707,921...103,716,760 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167 		JBrowse link
G Dntt deoxynucleotidyltransferase, terminal involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:41,017,701...41,047,964
Ensembl chr19:41,017,714...41,047,964 		JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449 		JBrowse link
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:12,927,600...12,969,873
Ensembl chr16:12,927,548...12,968,481 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9600082) GO_Central PMID:9600082 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:9600082) GO_Central PMID:9600082 NCBI chr 8:57,964,877...57,969,033
Ensembl chr 8:57,964,941...57,969,033 		JBrowse link
G Iffo1 intermediate filament family orphan 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:125,122,167...125,138,746
Ensembl chr 6:125,122,204...125,138,745 		JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:4,366,172...4,448,749
Ensembl chr19:4,364,447...4,448,313 		JBrowse link
G Lig1 ligase I, DNA, ATP-dependent acts_upstream_of_or_within IMP (PMID:21655080) MGI PMID:21655080 NCBI chr 7:13,011,101...13,045,351
Ensembl chr 7:13,011,239...13,045,350 		JBrowse link
G Lig3 ligase III, DNA, ATP-dependent acts_upstream_of_or_within IMP (PMID:21655080) MGI PMID:21655080 NCBI chr11:82,671,977...82,695,100
Ensembl chr11:82,671,934...82,695,100 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent involved_in
acts_upstream_of_or_within		 IMP
IBA
ISO		 (MGI:5705227|PMID:12361565)
(PMID:10823907)
(PMID:16777961)		 BHF-UCL
MGI
GO_Central		 PMID:10823907 PMID:12361565 PMID:16777961 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5705227 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within IMP (PMID:15084308) MGI PMID:15084308 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISS
IBA
ISO
IMP		 (MGI:3694282|PMID:16439205), (MGI:3694283|PMID:16439204)
(MGI:5807276|PMID:27798842), (MGI:5822993|PMID:28051062)		 UniProt
GO_Central
MGI		 PMID:16439204 PMID:16439205 PMID:27798842 PMID:28051062 GO_REF:0000033 GO_REF:0000119 MGI:3694282 MGI:3694283 MGI:4834177 MGI:5807276 MGI:5822993 NCBI chr 1:75,006,505...75,101,870
Ensembl chr 1:75,006,298...75,101,844 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in ISO (PMID:16810316) UniProt PMID:16810316 NCBI chr15:59,246,047...59,473,538
Ensembl chr15:59,246,096...59,473,533 		JBrowse link
G Paxx non-homologous end joining factor involved_in IMP
IBA
ISO		 (MGI:5807276|PMID:27798842), (MGI:5822993|PMID:28051062) UniProt
GO_Central
MGI		 PMID:27798842 PMID:28051062 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5807276 MGI:5822993 NCBI chr 2:25,345,132...25,352,666
Ensembl chr 2:25,345,153...25,351,106 		JBrowse link
G Pnkp polynucleotide kinase 3'- phosphatase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,505,903...44,514,761
Ensembl chr 7:44,506,563...44,512,416 		JBrowse link
G Pola1 polymerase (DNA directed), alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:92,348,372...92,675,993
Ensembl chr  X:92,348,373...92,675,761 		JBrowse link
G Polb polymerase (DNA directed), beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451 		JBrowse link
G Poll polymerase (DNA directed), lambda involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:45,540,714...45,549,025
Ensembl chr19:45,540,714...45,548,970 		JBrowse link
G Polm polymerase (DNA directed), mu involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:5,777,860...5,788,831
Ensembl chr11:5,777,860...5,788,016 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide involved_in
acts_upstream_of_or_within		 NAS
IMP		 (MGI:6870963|PMID:10207111)
(PMID:23836881)		 ComplexPortal
MGI		 PMID:10207111 PMID:23836881 MGI:6870963 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923 		JBrowse link
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:61,542,038...61,630,720
Ensembl chr 2:61,542,038...61,630,720 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252 		JBrowse link
G Rnf8 ring finger protein 8 involved_in IMP (MGI:5293246|PMID:21857671), (MGI:5465398|PMID:22266820) UniProt PMID:21857671 PMID:22266820 MGI:5293246 MGI:5465398 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965 		JBrowse link
G Setmar SET domain without mariner transposase fusion involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:108,042,006...108,054,088
Ensembl chr 6:108,042,006...108,054,083 		JBrowse link
G Smarcal1 SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:72,575,593...72,675,949
Ensembl chr 1:72,622,410...72,672,293 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 NOT|involved_in ISO (PMID:16810316) UniProt PMID:16810316 NCBI chr19:23,183,817...23,251,286
Ensembl chr19:23,183,815...23,251,261 		JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 involved_in IDA
ISO
IMP		 (MGI:5887194|PMID:20362325)
(MGI:5476381|PMID:23333305)		 UniProt
MGI		 PMID:20362325 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5476381 MGI:5887194 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 involved_in IMP (MGI:3758502|PMID:14690602) BHF-UCL PMID:14690602 MGI:3758502 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 involved_in
acts_upstream_of_or_within		 IMP
IBA
ISO		 (MGI:3758502|PMID:14690602)
(PMID:17713479)		 BHF-UCL
MGI
GO_Central		 PMID:14690602 PMID:17713479 GO_REF:0000033 GO_REF:0000119 MGI:3758502 MGI:4834177 NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727 		JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 involved_in NAS
IBA
ISO		 (MGI:6869975|PMID:9362500), (MGI:6870963|PMID:10207111) ComplexPortal
GO_Central
MGI		 PMID:9362500 PMID:10207111 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6869975 MGI:6870963 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111 		JBrowse link
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 involved_in
acts_upstream_of_or_within		 NAS
IMP
IBA
ISO		 (MGI:6869975|PMID:9362500), (MGI:6870963|PMID:10207111)
(PMID:11751629)		 ComplexPortal
MGI
GO_Central		 PMID:9362500 PMID:10207111 PMID:11751629 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6869975 MGI:6870963 NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fancm Fanconi anemia, complementation group M involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:65,120,884...65,178,616
Ensembl chr12:65,122,377...65,178,832 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464 		JBrowse link
G Rad54l RAD54 like (S. cerevisiae) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:115,951,458...115,980,875
Ensembl chr 4:115,951,461...115,980,887 		JBrowse link
G Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:111,769,626...111,780,326
Ensembl chr12:111,769,626...111,780,307 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within IMP (PMID:27760146) MGI PMID:27760146 NCBI chr 1:9,978,863...10,011,179
Ensembl chr 1:9,978,863...10,012,310 		JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spo11 SPO11 initiator of meiotic double stranded breaks involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:172,819,172...172,835,369
Ensembl chr 2:172,819,493...172,835,369 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4930447C04Rik RIKEN cDNA 4930447C04 gene involved_in IMP
IBA		 (MGI:5822939|PMID:27796301) UniProt
GO_Central		 PMID:27796301 GO_REF:0000033 MGI:5822939 NCBI chr12:72,926,967...72,964,742
Ensembl chr12:72,927,883...72,987,548 		JBrowse link
G Brip1 BRCA1 interacting protein C-terminal helicase 1 acts_upstream_of_or_within IMP (PMID:26490168) MGI PMID:26490168 NCBI chr11:85,948,957...86,092,041
Ensembl chr11:85,948,964...86,092,019 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:87,267,471...87,295,780
Ensembl chr11:87,267,471...87,295,780 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within IMP (PMID:27760146) MGI PMID:27760146 NCBI chr 1:9,978,863...10,011,179
Ensembl chr 1:9,978,863...10,012,310 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir221 microRNA 221 involved_in ISO (PMID:24147153) BHF-UCL PMID:24147153 NCBI chr  X:19,012,533...19,012,627
Ensembl chr  X:19,012,533...19,012,627 		JBrowse link
G Otub1 OTU domain, ubiquitin aldehyde binding 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:7,175,571...7,183,649
Ensembl chr19:7,175,567...7,183,681 		JBrowse link
G Otub2 OTU domain, ubiquitin aldehyde binding 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:103,343,244...103,372,609
Ensembl chr12:103,354,941...103,372,609 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:99,569,461...99,630,537
Ensembl chr 7:99,569,461...99,629,655 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239 		JBrowse link
G C1qbp complement component 1, q subcomponent binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:70,868,672...70,873,852
Ensembl chr11:70,868,662...70,873,852 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in IMP
IBA
ISO
IDA		 (MGI:6241455|PMID:30356214)
(MGI:6370284|PMID:31544964)		 UniProt
GO_Central
MGI		 PMID:30356214 PMID:31544964 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6241455 MGI:6370284 NCBI chr 9:78,337,800...78,350,519
Ensembl chr 9:78,337,808...78,350,519 		JBrowse link
G Csnk2a1 casein kinase 2, alpha 1 polypeptide involved_in ISO (PMID:28512243) UniProt PMID:28512243 NCBI chr 2:152,068,468...152,123,772
Ensembl chr 2:152,068,759...152,123,772 		JBrowse link
G Fancb Fanconi anemia, complementation group B involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:25520194) GO_Central
MGI		 PMID:25520194 GO_REF:0000033 NCBI chr  X:163,763,678...163,780,266
Ensembl chr  X:163,763,588...163,780,268 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IMP
ISO		 (MGI:5566975|PMID:24108124) UniProt
MGI		 PMID:24108124 GO_REF:0000119 MGI:4834177 MGI:5566975 NCBI chr 2:11,747,384...11,782,396
Ensembl chr 2:11,747,384...11,782,393 		JBrowse link
G Helb helicase (DNA) B involved_in IMP
IBA
ISO		 (MGI:5766842|PMID:26774285) UniProt
GO_Central
MGI		 PMID:26774285 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5766842 NCBI chr10:119,919,513...119,948,917
Ensembl chr10:119,919,513...119,948,892 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Klhl15 kelch-like 15 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:93,275,884...93,321,330
Ensembl chr  X:93,278,205...93,321,330 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:124,577,980...124,600,371
Ensembl chr 5:124,577,993...124,600,371 		JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Magef1 MAGE family member F1 involved_in ISO (PMID:29225034) UniProt PMID:29225034 NCBI chr16:21,150,650...21,152,106
Ensembl chr16:21,151,396...21,151,879
Ensembl chr16:21,151,396...21,151,879 		JBrowse link
G Parpbp PARP1 binding protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:87,927,260...87,982,831
Ensembl chr10:87,927,294...87,982,803 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096 		JBrowse link
G Polq polymerase (DNA directed), theta involved_in IMP
ISO
IDA		 (MGI:5920742|PMID:28687761)
(MGI:5621198|PMID:25642960), (MGI:6869820|PMID:29058711)		 UniProt
MGI		 PMID:25642960 PMID:28687761 PMID:29058711 GO_REF:0000119 MGI:4834177 MGI:5621198 MGI:5920742 MGI:6869820 NCBI chr16:36,832,104...36,922,321
Ensembl chr16:36,832,148...36,915,779 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:138,381,116...138,455,333
Ensembl chr  X:138,381,116...138,455,331 		JBrowse link
G Recql5 RecQ protein-like 5 acts_upstream_of_or_within IGI (PMID:25520194) MGI PMID:25520194 NCBI chr11:115,783,421...115,824,339
Ensembl chr11:115,783,421...115,824,303 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP
ISO		 (MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305) UniProt
MGI		 PMID:23306437 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5468037 MGI:5476381 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:10,652,923...10,661,099
Ensembl chr16:10,652,923...10,710,830 		JBrowse link
G Senp3 SUMO/sentrin specific peptidase 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,563,936...69,572,910
Ensembl chr11:69,563,941...69,572,910 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947 		JBrowse link
G Smchd1 SMC hinge domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338 		JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 involved_in IDA
ISO
IMP		 (MGI:5887194|PMID:20362325)
(MGI:5476381|PMID:23333305)		 UniProt
MGI		 PMID:20362325 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5476381 MGI:5887194 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:88,460,984...88,477,032
Ensembl chr 3:88,461,065...88,477,032 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,238,310...134,251,233
Ensembl chr 4:134,238,310...134,251,238 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:34,848,706...34,855,024
Ensembl chr 6:34,848,706...34,854,995 		JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Hsf1 heat shock factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113 		JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419 		JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:4,756,975...4,758,892
Ensembl chr16:4,756,625...4,758,896 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA-glycosylase 1 acts_upstream_of_or_within ISO (PMID:19506022) MGI PMID:19506022 NCBI chr 6:113,303,959...113,311,149
Ensembl chr 6:113,303,933...113,312,029 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Actl6a actin-like 6A involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122 		JBrowse link
G Actl6b actin-like 6B involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 5:137,551,784...137,567,844
Ensembl chr 5:137,551,779...137,567,844 		JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Arid1b AT-rich interaction domain 1B involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr17:5,044,481...5,397,931
Ensembl chr17:5,044,607...5,397,931 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873 		JBrowse link
G Bcl7a B cell CLL/lymphoma 7A involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 5:123,482,511...123,512,146
Ensembl chr 5:123,481,897...123,513,055 		JBrowse link
G Bcl7b B cell CLL/lymphoma 7B involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 5:135,197,226...135,210,706
Ensembl chr 5:135,197,137...135,210,709 		JBrowse link
G Bcl7c B cell CLL/lymphoma 7C involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 7:127,260,626...127,307,938
Ensembl chr 7:127,260,628...127,308,105 		JBrowse link
G Brd7 bromodomain containing 7 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 8:89,056,522...89,089,249
Ensembl chr 8:89,057,667...89,088,822 		JBrowse link
G Ddx11 DEAD/H box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chr17:66,430,508...66,459,169
Ensembl chr17:66,430,515...66,459,169 		JBrowse link
G Dpf1 double PHD fingers 1 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr 7:29,003,366...29,017,017
Ensembl chr 7:29,003,376...29,017,668 		JBrowse link
G Dpf2 double PHD fingers 2 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr19:5,946,544...5,962,899
Ensembl chr19:5,946,544...5,963,038 		JBrowse link
G Dpf3 double PHD fingers 3 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr12:83,260,525...83,534,510
Ensembl chr12:83,260,519...83,534,490 		JBrowse link
G Fmn2 formin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:174,324,079...174,650,295
Ensembl chr 1:174,329,391...174,650,295 		JBrowse link
G Foxm1 forkhead box M1 involved_in IMP
ISO		 (MGI:3698692|PMID:17101782) UniProt
MGI		 PMID:17101782 GO_REF:0000119 MGI:3698692 MGI:4834177 NCBI chr 6:128,339,957...128,352,849
Ensembl chr 6:128,339,930...128,353,109 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in IMP (MGI:6467697|PMID:29125140), (MGI:6716977|PMID:33115731) UniProt PMID:29125140 PMID:33115731 MGI:6467697 MGI:6716977 NCBI chr 9:73,008,660...73,013,915
Ensembl chr 9:73,009,118...73,011,720 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:136,496,315...136,732,001
Ensembl chr 7:136,496,343...136,731,995 		JBrowse link
G Ooep oocyte expressed protein involved_in IMP (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007 		JBrowse link
G Pbrm1 polybromo 1 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Phf10 PHD finger protein 10 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr17:15,165,269...15,181,550
Ensembl chr17:15,165,271...15,181,535 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483 		JBrowse link
G Sirt6 sirtuin 6 involved_in IDA
ISO		 (MGI:7258357|PMID:31002797) UniProt
MGI		 PMID:31002797 GO_REF:0000119 MGI:4834177 MGI:7258357 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:77,191,207...77,283,632
Ensembl chr13:77,191,207...77,283,592 		JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:44,906,948...44,972,225
Ensembl chr19:44,919,558...44,972,225 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr10:75,732,603...75,757,448
Ensembl chr10:75,732,603...75,757,451 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246 		JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr10:128,294,823...128,326,460
Ensembl chr10:128,295,117...128,326,351 		JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr15:99,600,175...99,611,872
Ensembl chr15:99,600,010...99,611,872 		JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr11:106,153,997...106,163,810
Ensembl chr11:106,154,005...106,163,798 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409 		JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr11:99,099,873...99,121,843
Ensembl chr11:99,099,873...99,121,843 		JBrowse link
G Spidr scaffolding protein involved in DNA repair involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715 		JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:67,621,279...67,745,880
Ensembl chr18:67,621,279...67,743,860 		JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:124,059,452...124,096,257
Ensembl chr 8:124,059,452...124,096,254 		JBrowse link
G Timeless timeless circadian clock 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519 		JBrowse link
G Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,368,850...15,412,382
Ensembl chr16:15,369,941...15,413,637 		JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081 		JBrowse link
G Zcwpw1 zinc finger, CW type with PWWP domain 1 involved_in IMP (MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380), (MGI:6467709|PMID:32744506) ARUK-UCL PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 MGI:6358520 MGI:6442007 MGI:6443266 MGI:6467709 NCBI chr 5:137,785,593...137,820,883
Ensembl chr 5:137,786,060...137,820,883 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Actl6a actin-like 6A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122 		JBrowse link
G Actr2 actin related protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:20,012,304...20,062,951
Ensembl chr11:20,012,304...20,062,913 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873 		JBrowse link
G Blm Bloom syndrome, RecQ like helicase acts_upstream_of_or_within IGI (PMID:25520194) MGI PMID:25520194 NCBI chr 7:80,104,839...80,184,896
Ensembl chr 7:80,104,481...80,184,867 		JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:34,731,668...34,757,916
Ensembl chr18:34,731,668...34,757,654 		JBrowse link
G Crebbp CREB binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:117,531,878...117,539,450
Ensembl chr 4:117,531,878...117,539,470 		JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:110,812,239...110,918,583
Ensembl chr 5:110,812,239...110,918,583 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:49,341,498...49,441,954
Ensembl chr 2:49,341,498...49,441,960 		JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947 		JBrowse link
G Fancb Fanconi anemia, complementation group B acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:25520194) MGI
GO_Central		 PMID:25520194 GO_REF:0000033 NCBI chr  X:163,763,678...163,780,266
Ensembl chr  X:163,763,588...163,780,268 		JBrowse link
G Fus fused in sarcoma involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:127,565,276...127,581,204
Ensembl chr 7:127,566,629...127,584,873 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:56,386,661...56,407,605
Ensembl chr17:56,386,634...56,407,607 		JBrowse link
G Helq helicase, POLQ-like involved_in IDA (MGI:5547892|PMID:24005329) UniProt PMID:24005329 MGI:5547892 NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464 		JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:21,948,002...21,976,037
Ensembl chr 6:21,949,570...21,976,037 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in IMP
ISO		 (MGI:6716962|PMID:25936915) UniProt
MGI		 PMID:25936915 GO_REF:0000119 MGI:4834177 MGI:6716962 NCBI chr 9:73,008,660...73,013,915
Ensembl chr 9:73,009,118...73,011,720 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:93,776,635...93,837,815
Ensembl chr11:93,776,678...93,837,811 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:124,978,883...125,007,031
Ensembl chr 4:124,978,927...125,007,031 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:89,973,722...89,996,873
Ensembl chr 9:89,973,718...89,996,827 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:135,633,691...135,644,435
Ensembl chr  X:135,633,691...135,644,439 		JBrowse link
G Mrgbp MRG/MORF4L binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:180,222,990...180,228,097
Ensembl chr 2:180,223,097...180,228,097 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:50,065,678...50,090,943
Ensembl chr11:50,065,271...50,090,942 		JBrowse link
G Ooep oocyte expressed protein involved_in IMP (MGI:6272426|PMID:29955025) UniProt PMID:29955025 MGI:6272426 NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819 		JBrowse link
G Peli1 pellino 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:21,041,283...21,100,327
Ensembl chr11:21,041,291...21,100,323 		JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,989,795...81,003,554
Ensembl chr10:80,989,100...81,003,757 		JBrowse link
G Prmt1 protein arginine N-methyltransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550 		JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:79,594,349...79,607,282
Ensembl chr10:79,594,349...79,602,786 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520 		JBrowse link
G Skp2 S-phase kinase-associated protein 2 involved_in IDA
ISO		 (MGI:5438910|PMID:22464731) UniProt
MGI		 PMID:22464731 GO_REF:0000119 MGI:4834177 MGI:5438910 NCBI chr15:9,112,070...9,155,512
Ensembl chr15:9,112,073...9,155,512 		JBrowse link
G Timeless timeless circadian clock 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588 		JBrowse link
G Vps72 vacuolar protein sorting 72 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:95,018,353...95,030,362
Ensembl chr 3:95,018,333...95,030,362 		JBrowse link
G Was Wiskott-Aldrich syndrome involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:7,947,705...7,956,730
Ensembl chr  X:7,947,692...7,956,737 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:119,723,961...119,755,652
Ensembl chr 9:119,723,944...119,755,653 		JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:117,051,046...117,060,412
Ensembl chr10:117,051,126...117,060,412 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh1 fumarate hydratase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201 		JBrowse link
G Kdm4d lysine (K)-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr 9:14,373,844...14,411,818
Ensembl chr 9:14,373,844...14,411,778 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:3,816,436...3,868,303
Ensembl chr19:3,817,421...3,868,303 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:4,743,091...4,750,513
Ensembl chr 7:4,743,114...4,750,513 		JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in NAS
ISO		 (MGI:6156517|PMID:29656893) ComplexPortal
MGI		 PMID:29656893 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:106,347,521...106,354,148
Ensembl chr 9:106,347,521...106,354,148 		JBrowse link
G Pnkp polynucleotide kinase 3'- phosphatase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,505,903...44,514,761
Ensembl chr 7:44,506,563...44,512,416 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP
ISO		 (MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305) CACAO
MGI		 PMID:23306437 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5468037 MGI:5476381 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395 		JBrowse link
G Setmar SET domain without mariner transposase fusion involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:108,042,006...108,054,088
Ensembl chr 6:108,042,006...108,054,083 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in NAS
ISO
IBA		 (MGI:6156517|PMID:29656893) ComplexPortal
MGI
GO_Central		 PMID:29656893 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in NAS
ISO		 (MGI:6156517|PMID:29656893) ComplexPortal
MGI		 PMID:29656893 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in NAS
ISO
IBA		 (MGI:6156517|PMID:29656893) ComplexPortal
MGI
GO_Central		 PMID:29656893 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947 		JBrowse link
G Smchd1 SMC hinge domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338 		JBrowse link
G Top2b topoisomerase (DNA) II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chr14:6,038,976...6,104,585
Ensembl chr14:6,034,301...6,104,584 		JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helb helicase (DNA) B involved_in IMP
ISO		 (MGI:5766842|PMID:26774285) UniProt
MGI		 PMID:26774285 GO_REF:0000119 MGI:4834177 MGI:5766842 NCBI chr10:119,919,513...119,948,917
Ensembl chr10:119,919,513...119,948,892 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Actl6a actin-like 6A involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122 		JBrowse link
G Atr ataxia telangiectasia and Rad3 related involved_in NAS (MGI:6828548|PMID:11721054) ComplexPortal PMID:11721054 MGI:6828548 NCBI chr 9:95,739,655...95,834,813
Ensembl chr 9:95,739,650...95,833,834 		JBrowse link
G Atrip ATR interacting protein involved_in NAS (MGI:6828548|PMID:11721054) ComplexPortal PMID:11721054 MGI:6828548 NCBI chr 9:108,888,815...108,903,192
Ensembl chr 9:108,887,001...108,903,192 		JBrowse link
G Brd8 bromodomain containing 8 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr18:34,731,668...34,757,916
Ensembl chr18:34,731,668...34,757,654 		JBrowse link
G Dek DEK proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI
GO_Central		 GO_REF:0000008 GO_REF:0000033 NCBI chr13:47,238,243...47,261,134
Ensembl chr13:47,238,251...47,259,677 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 4:117,531,878...117,539,450
Ensembl chr 4:117,531,878...117,539,470 		JBrowse link
G Ep400 E1A binding protein p400 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 5:110,812,239...110,918,583
Ensembl chr 5:110,812,239...110,918,583 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 2:49,341,498...49,441,954
Ensembl chr 2:49,341,498...49,441,960 		JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 6:21,948,002...21,976,037
Ensembl chr 6:21,949,570...21,976,037 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr11:93,776,635...93,837,815
Ensembl chr11:93,776,678...93,837,811 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 4:124,978,883...125,007,031
Ensembl chr 4:124,978,927...125,007,031 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 9:89,973,722...89,996,873
Ensembl chr 9:89,973,718...89,996,827 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr  X:135,633,691...135,644,435
Ensembl chr  X:135,633,691...135,644,439 		JBrowse link
G Mrgbp MRG/MORF4L binding protein involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 2:180,222,990...180,228,097
Ensembl chr 2:180,223,097...180,228,097 		JBrowse link
G Pml promyelocytic leukemia involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:58,125,359...58,157,077
Ensembl chr 9:58,125,359...58,157,069 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:100,810,596...100,846,891
Ensembl chr 6:100,810,583...100,846,895 		JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:29,118,053...29,170,797
Ensembl chr11:29,122,890...29,170,797 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588 		JBrowse link
G Vps72 vacuolar protein sorting 72 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 3:95,018,353...95,030,362
Ensembl chr 3:95,018,333...95,030,362 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr10:117,051,046...117,060,412
Ensembl chr10:117,051,126...117,060,412 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:36,619,935...36,637,897
Ensembl chr 9:36,619,778...36,638,361 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:11,737,429...11,758,962
Ensembl chr11:11,737,431...11,758,962 		JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:100,810,596...100,846,891
Ensembl chr 6:100,810,583...100,846,895 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:132,495,671...132,506,057
Ensembl chr 4:132,495,643...132,506,063 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:180,961,504...180,998,409
Ensembl chr 2:180,961,532...180,998,409 		JBrowse link
G Setd2 SET domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
G Spidr scaffolding protein involved in DNA repair involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715 		JBrowse link
G Terf2ip telomeric repeat binding factor 2, interacting protein involved_in IMP (MGI:4440768|PMID:20339076) UniProt PMID:20339076 MGI:4440768 NCBI chr 8:112,737,991...112,747,160
Ensembl chr 8:112,738,030...112,747,160 		JBrowse link
G Tex15 testis expressed gene 15 meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:18283110) GO_Central
MGI		 PMID:18283110 GO_REF:0000033 NCBI chr 8:34,006,712...34,082,531
Ensembl chr 8:34,006,766...34,075,610 		JBrowse link
G Usp51 ubiquitin specific protease 51 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:151,789,433...151,794,360
Ensembl chr  X:151,789,465...151,792,412 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:67,721,935...67,748,492
Ensembl chr10:67,721,933...67,748,492 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr11:20,012,304...20,062,951
Ensembl chr11:20,012,304...20,062,913 		JBrowse link
G Dek DEK proto-oncogene acts_upstream_of_or_within IMP (PMID:21653549) MGI PMID:21653549 NCBI chr13:47,238,243...47,261,134
Ensembl chr13:47,238,251...47,259,677 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:50,065,678...50,090,943
Ensembl chr11:50,065,271...50,090,942 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:23241889) MGI PMID:23241889 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
G Pot1a protection of telomeres 1A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:25,743,939...25,809,280
Ensembl chr 6:25,743,736...25,809,245 		JBrowse link
G Pot1b protection of telomeres 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:55,958,190...56,019,647
Ensembl chr17:55,958,951...56,019,628 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975 		JBrowse link
G Usp51 ubiquitin specific protease 51 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:151,789,433...151,794,360
Ensembl chr  X:151,789,465...151,792,412 		JBrowse link
G Was Wiskott-Aldrich syndrome NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr  X:7,947,705...7,956,730
Ensembl chr  X:7,947,692...7,956,737 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm Bloom syndrome, RecQ like helicase acts_upstream_of_or_within IMP (PMID:25597246) MGI PMID:25597246 NCBI chr 7:80,104,839...80,184,896
Ensembl chr 7:80,104,481...80,184,867 		JBrowse link
G Fancb Fanconi anemia, complementation group B acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:25520194) MGI
GO_Central		 PMID:25520194 GO_REF:0000033 NCBI chr  X:163,763,678...163,780,266
Ensembl chr  X:163,763,588...163,780,268 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Rad21 RAD21 cohesin complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:51,826,000...51,856,934
Ensembl chr15:51,825,636...51,855,143 		JBrowse link
G Rad21l RAD21-like (S. pombe) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:151,486,286...151,512,542
Ensembl chr 2:151,487,324...151,510,453 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within IMP (PMID:22778135) MGI PMID:22778135 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926 		JBrowse link
G Recql5 RecQ protein-like 5 acts_upstream_of_or_within IMP (PMID:25520194) MGI PMID:25520194 NCBI chr11:115,783,421...115,824,339
Ensembl chr11:115,783,421...115,824,303 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    response to stimulus 10772
      response to stress 4448
        cellular response to stress 2064
          DNA damage response 915
            DNA repair 600
              double-strand break repair 313
                DNA double-strand break processing + 22
                double-strand break repair involved in meiotic recombination 13
                double-strand break repair via homologous recombination + 178
                double-strand break repair via nonhomologous end joining + 74
                double-strand break repair via single-strand annealing + 8
                mitochondrial double-strand break repair + 1
                negative regulation of double-strand break repair + 39
                positive regulation of double-strand break repair + 93
                regulation of double-strand break repair + 144
Path 2
Term Annotations click to browse term
  biological_process 28573
    metabolic process 11001
      organic substance metabolic process 10573
        organic cyclic compound metabolic process 5906
          nucleobase-containing compound metabolic process 5390
            nucleic acid metabolic process 4826
              DNA metabolic process 987
                DNA repair 600
                  double-strand break repair 313
                    DNA double-strand break processing + 22
                    double-strand break repair involved in meiotic recombination 13
                    double-strand break repair via homologous recombination + 178
                    double-strand break repair via nonhomologous end joining + 74
                    double-strand break repair via single-strand annealing + 8
                    mitochondrial double-strand break repair + 1
                    negative regulation of double-strand break repair + 39
                    positive regulation of double-strand break repair + 93
                    regulation of double-strand break repair + 144
paths to the root