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ONTOLOGY REPORT - ANNOTATIONS


Term:postreplication repair
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Accession:GO:0006301 term browser browse the term
Definition:The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.
Synonyms:exact_synonym: postreplication DNA repair
 xref: Wikipedia:Postreplication_repair



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postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067339.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:96,977,420...96,977,861 JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
(PMID:17349954)
GO_REF:0000107
RGD
Ensembl
PMID:17349954 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G LOC679539 similar to ubiquitin-conjugating enzyme E2 variant 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:4,703,243...4,704,962 JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
IEA
PMID:21873635
MGI:1858055 (MGI:74950|PMID:7628020)
GO_REF:0000024
GO_REF:0000107
(PMID:7923193)
RGD
UniProt
Ensembl
PMID:7628020 PMID:7923193 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:74950, RGD:13792537 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417
JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (MGI:1860718|PMID:10871396) RGD PMID:10871396 MGI:1860718 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO (PMID:14981545) RGD PMID:14981545 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO
IBA
(PMID:17349954)
PMID:21873635
RGD PMID:17349954 PMID:21873635 RGD:13792537 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355
JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369
JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube2v1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO SGD:S000003055 (MGI:2136126|PMID:11406273) RGD PMID:11406273 MGI:2136126 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 acts_upstream_of_or_within ISO SGD:S000003055 (MGI:2136126|PMID:11406273) RGD PMID:11406273 MGI:2136126 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369
JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA
ISS
(PMID:24191025)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24191025 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 involved_in ISO
IBA
(PMID:24191025)
PMID:21873635
RGD PMID:24191025 PMID:21873635 RGD:13792537 NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576
JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665
JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:87,674,702...87,712,723
Ensembl chr 6:87,674,702...87,699,305
JBrowse link
G Polh DNA polymerase eta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723
JBrowse link
G Polk DNA polymerase kappa involved_in IBA
ISO
PMID:21873635
(PMID:28297716)
RGD PMID:28297716 PMID:21873635 RGD:13792537 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313
JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (PMID:24682820), (PMID:25746449), (PMID:28534480) RGD PMID:24682820 PMID:25746449 PMID:28534480 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565
JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2157239|PMID:11711549)
RGD PMID:11711549 PMID:21873635 MGI:2157239, RGD:13792537 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA
ISO
PMID:21873635
(PMID:24449906)
RGD PMID:24449906 PMID:21873635 RGD:13792537 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099
JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:20129063) RGD PMID:20129063 NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890
JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS
(PMID:22266823)
GO_REF:0000024
RGD
UniProt
PMID:22266823 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:24695737) RGD PMID:24695737 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Pclaf PCNA clamp associated factor involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:23000965)
UniProt
RGD
PMID:23000965 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:66,420,673...66,432,568
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:20129063)
UniProt
RGD
PMID:20129063 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Poli DNA polymerase iota involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3055735 (MGI:3695544|PMID:17114294)
RGD PMID:17114294 PMID:21873635 MGI:3695544, RGD:13792537 NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418
JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:20102227) RGD PMID:19908865 PMID:20102227 NCBI chr14:76,579,983...76,752,460 JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IBA
(PMID:24240614), (PMID:24267451)
PMID:21873635
RGD PMID:24240614 PMID:24267451 PMID:21873635 RGD:13792537 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565
JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22681887), (PMID:22902628), (PMID:23042605), (PMID:23042607)
Ensembl
UniProt
RGD
PMID:22681887 PMID:22902628 PMID:23042605 PMID:23042607 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,599...52,864,864
Ensembl chr19:52,857,866...52,864,864
JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS
(PMID:23042605)
GO_REF:0000024
RGD
UniProt
PMID:23042605 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      cellular metabolic process 10719
        cellular macromolecule metabolic process 8208
          DNA metabolic process 913
            DNA repair 512
              postreplication repair 31
                error-free postreplication DNA repair + 2
                translesion synthesis + 21
Path 2
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      cellular metabolic process 10719
        cellular aromatic compound metabolic process 5635
          nucleobase-containing compound metabolic process 5410
            nucleic acid metabolic process 4926
              DNA metabolic process 913
                DNA repair 512
                  postreplication repair 31
                    error-free postreplication DNA repair + 2
                    translesion synthesis + 21
paths to the root