nucleotide-excision repair, DNA gap filling - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS	{{ watchLinkText }}

Term:	nucleotide-excision repair, DNA gap filling	go back to main search page
Accession:	GO:0006297	browse the term
Definition:	Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.

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Genes (6)

nucleotide-excision repair, DNA gap filling

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

DNA ligase 4

involved_in

PMID:21873635
(PMID:12517771), (PMID:17290226)

PMID:12517771 PMID:17290226 PMID:21873635

NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040

G

DNA polymerase beta

NOT|involved_in

(PMID:20227374)

NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812

G

DNA polymerase delta 1, catalytic subunit

involved_in

(PMID:20227374)
PMID:21873635
GO_REF:0000107

PMID:20227374 PMID:21873635

GO_REF:0000107, RGD:13792537

NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465

G

DNA polymerase delta 3, accessory subunit

involved_in

(PMID:20227374)
PMID:21873635

PMID:20227374 PMID:21873635

NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665

G

DNA polymerase epsilon, catalytic subunit

involved_in

(PMID:20227374)
PMID:21873635

PMID:20227374 PMID:21873635

NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939

G

DNA polymerase kappa

involved_in

(PMID:20227374)

NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313

Term paths to the root

Path 1
Term	Annotations
biological_process	19818
metabolic process	12096
organic substance metabolic process	11623
macromolecule metabolic process	9355
nucleic acid metabolic process	2315
DNA metabolic process	1001
nucleotide-excision repair, DNA gap filling	6
Path 2
Term	Annotations
biological_process	19818
cellular process	17392
cellular metabolic process	7496
heterocycle metabolic process	2994
nucleobase-containing compound metabolic process	2826
nucleic acid metabolic process	2315
DNA metabolic process	1001
DNA repair	519
nucleotide-excision repair	57
nucleotide-excision repair, DNA gap filling	6

paths to the root