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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleotide-excision repair, DNA gap filling
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Accession:GO:0006297 term browser browse the term
Definition:Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.



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nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig4 DNA ligase 4 involved_in IBA
ISO
PMID:21873635
(PMID:12517771), (PMID:17290226)
RGD PMID:12517771 PMID:17290226 PMID:21873635 RGD:13792537 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Polb DNA polymerase beta NOT|involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA
IBA
(PMID:20227374)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:20227374 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO
IBA
(PMID:20227374)
PMID:21873635
RGD PMID:20227374 PMID:21873635 RGD:13792537 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IBA
(PMID:20227374)
PMID:21873635
RGD PMID:20227374 PMID:21873635 RGD:13792537 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939
JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    metabolic process 11461
      cellular metabolic process 9699
        cellular macromolecule metabolic process 3404
          DNA metabolic process 992
            nucleotide-excision repair, DNA gap filling 6
Path 2
Term Annotations click to browse term
  biological_process 18737
    cellular process 17432
      cellular metabolic process 9699
        cellular nitrogen compound metabolic process 6419
          nucleobase-containing compound metabolic process 5336
            nucleic acid metabolic process 4845
              DNA metabolic process 992
                DNA repair 509
                  nucleotide-excision repair 55
                    nucleotide-excision repair, DNA gap filling 6
paths to the root