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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of DNA repair
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Accession:GO:0006282 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of DNA repair.



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regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 BRCA1 A complex subunit involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr 5:100,952,668...100,968,816
Ensembl chr 5:100,953,058...100,968,831
JBrowse link
G Actl6a actin-like 6A involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122
JBrowse link
G Actr5 ARP5 actin-related protein 5 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 2:158,466,800...158,481,131
Ensembl chr 2:158,466,808...158,481,131
JBrowse link
G Actr8 ARP8 actin-related protein 8 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr14:29,700,294...29,717,409
Ensembl chr14:29,700,294...29,728,311
JBrowse link
G Atxn7 ataxin 7 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr14:8,358,358...8,508,324
Ensembl chr14:8,362,461...8,508,323
JBrowse link
G Atxn7l3 ataxin 7-like 3 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr11:102,180,126...102,187,615
Ensembl chr11:102,180,126...102,187,457
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr 8:71,848,809...71,857,416
Ensembl chr 8:71,849,505...71,857,263
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr 5:31,855,394...32,242,083
Ensembl chr 5:31,855,028...32,242,306
JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr 1:71,066,694...71,142,300
Ensembl chr 1:71,066,657...71,142,305
JBrowse link
G Brca1 breast cancer 1, early onset involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr  X:74,460,234...74,499,307
Ensembl chr  X:74,460,234...74,497,607
JBrowse link
G Cdk9 cyclin dependent kinase 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:32,595,794...32,608,098
Ensembl chr 2:32,595,796...32,603,088
JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr15:44,291,488...44,301,652
Ensembl chr15:44,291,438...44,301,652
JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within IMP (PMID:20467439) MGI PMID:20467439 NCBI chr17:36,132,605...36,133,803
Ensembl chr17:36,132,576...36,133,815
JBrowse link
G Ino80 INO80 complex subunit involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168
JBrowse link
G Ino80b INO80 complex subunit B involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 6:83,098,746...83,102,100
Ensembl chr 6:83,098,746...83,102,412
JBrowse link
G Ino80c INO80 complex subunit C involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr18:24,237,818...24,254,876
Ensembl chr18:24,237,814...24,255,010
JBrowse link
G Ino80d INO80 complex subunit D involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 1:63,086,960...63,153,693
Ensembl chr 1:62,997,577...63,153,849
JBrowse link
G Ino80e INO80 complex subunit E involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:126,450,756...126,461,544
Ensembl chr 7:126,450,132...126,461,549
JBrowse link
G Kat2a K(lysine) acetyltransferase 2A involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291
JBrowse link
G Kat2b K(lysine) acetyltransferase 2B involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr17:53,873,802...53,979,749
Ensembl chr17:53,873,889...53,979,748
JBrowse link
G Mcrs1 microspherule protein 1 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr15:99,140,698...99,149,838
Ensembl chr15:99,140,698...99,149,842
JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 9:31,297,476...31,332,629
Ensembl chr 9:31,297,488...31,332,629
JBrowse link
G Parg poly (ADP-ribose) glycohydrolase involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:31,923,900...32,020,671
Ensembl chr14:31,923,906...32,019,507
JBrowse link
G Phf13 PHD finger protein 13 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:152,074,088...152,080,636
Ensembl chr 4:152,074,090...152,080,715
JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:138,381,116...138,455,333
Ensembl chr  X:138,381,116...138,455,331
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr 8:111,537,123...111,573,578
Ensembl chr 8:111,536,871...111,573,419
JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr10:12,884,194...12,884,927
Ensembl chr10:12,881,087...12,884,927
JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in NAS
IDA
(MGI:6867268|PMID:11564863)
(PMID:35210392)
ComplexPortal
UniProt
PMID:11564863 PMID:35210392 MGI:6867268 NCBI chr 7:126,247,558...126,271,951
Ensembl chr 7:126,248,481...126,272,097
JBrowse link
G Sirt7 sirtuin 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:120,509,197...120,515,840
Ensembl chr11:120,509,198...120,516,066
JBrowse link
G Supt20 SPT20 SAGA complex component involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr 3:54,600,181...54,636,184
Ensembl chr 3:54,600,228...54,636,187
JBrowse link
G Supt3 SPT3, SAGA and STAGA complex component involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr17:45,088,005...45,430,181
Ensembl chr17:45,088,039...45,430,177
JBrowse link
G Supt7l SPT7-like, STAGA complex gamma subunit involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr 5:31,671,913...31,684,106
Ensembl chr 5:31,671,908...31,685,151
JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 acts_upstream_of_or_within IMP (PMID:23695662) MGI PMID:23695662 NCBI chr  X:7,927,401...7,940,994
Ensembl chr  X:7,927,410...7,940,999
JBrowse link
G Tada1 transcriptional adaptor 1 involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr 1:166,206,736...166,221,190
Ensembl chr 1:166,206,666...166,221,190
JBrowse link
G Tada2b transcriptional adaptor 2B involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr 5:36,631,014...36,641,629
Ensembl chr 5:36,631,014...36,641,629
JBrowse link
G Tada3 transcriptional adaptor 3 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr 6:113,343,594...113,354,799
Ensembl chr 6:113,342,986...113,354,844
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr 7:105,392,101...105,393,550
Ensembl chr 7:105,388,600...105,393,568
JBrowse link
G Taf12 TATA-box binding protein associated factor 12 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr 4:132,001,667...132,020,640
Ensembl chr 4:132,001,686...132,023,077
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 involved_in NAS (MGI:6867166|PMID:11406595) ComplexPortal PMID:11406595 MGI:6867166 NCBI chr15:54,878,525...54,935,580
Ensembl chr15:54,878,527...54,935,548
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 involved_in NAS (MGI:6867166|PMID:11406595) ComplexPortal PMID:11406595 MGI:6867166 NCBI chr 2:179,553,945...179,618,519
Ensembl chr 2:179,553,945...179,618,439
JBrowse link
G Taf5 TATA-box binding protein associated factor 5 involved_in NAS (MGI:6867166|PMID:11406595) ComplexPortal PMID:11406595 MGI:6867166 NCBI chr19:47,056,187...47,071,918
Ensembl chr19:47,056,185...47,071,918
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr 8:124,723,049...124,748,136
Ensembl chr 8:124,723,057...124,748,136
JBrowse link
G Taf6 TATA-box binding protein associated factor 6 involved_in NAS (MGI:6867166|PMID:11406595) ComplexPortal PMID:11406595 MGI:6867166 NCBI chr 5:138,176,879...138,185,713
Ensembl chr 5:138,176,879...138,185,713
JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in NAS (MGI:6867268|PMID:11564863) ComplexPortal PMID:11564863 MGI:6867268 NCBI chr19:8,751,718...8,763,781
Ensembl chr19:8,751,851...8,763,781
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 involved_in NAS (MGI:6867166|PMID:11406595) ComplexPortal PMID:11406595 MGI:6867166 NCBI chr18:37,773,544...37,777,257
Ensembl chr18:37,773,544...37,777,257
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr13:100,787,851...100,792,568
Ensembl chr13:100,788,087...100,792,568
Ensembl chr13:100,788,087...100,792,568
JBrowse link
G Tfpt TCF3 (E2A) fusion partner involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:3,623,323...3,632,911
Ensembl chr 7:3,623,323...3,632,928
JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588
JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in NAS (MGI:6867313|PMID:20656689) ComplexPortal PMID:20656689 MGI:6867313 NCBI chr13:55,175,693...55,248,176
Ensembl chr13:55,175,693...55,248,113
JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:98,812,047...98,823,780
Ensembl chr 4:98,812,047...98,823,780
JBrowse link
G Usp22 ubiquitin specific peptidase 22 involved_in NAS (MGI:6867166|PMID:11406595), (MGI:6867268|PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 MGI:6867166 MGI:6867268 NCBI chr11:61,042,607...61,065,885
Ensembl chr11:61,042,611...61,065,881
JBrowse link
G Yy1 YY1 transcription factor involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in IDA (PMID:35210392) UniProt PMID:35210392 NCBI chr 9:78,337,800...78,350,519
Ensembl chr 9:78,337,808...78,350,519
JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:99,127,103...99,132,916
Ensembl chr 7:99,127,103...99,132,945
JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir221 microRNA 221 involved_in ISO (PMID:24147153) BHF-UCL PMID:24147153 NCBI chr  X:19,012,533...19,012,627
Ensembl chr  X:19,012,533...19,012,627
JBrowse link
G Otub1 OTU domain, ubiquitin aldehyde binding 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:7,175,571...7,183,649
Ensembl chr19:7,175,567...7,183,681
JBrowse link
G Otub2 OTU domain, ubiquitin aldehyde binding 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:103,343,244...103,372,609
Ensembl chr12:103,354,941...103,372,609
JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:99,569,461...99,630,537
Ensembl chr 7:99,569,461...99,629,655
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828
JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239
JBrowse link
G C1qbp complement component 1, q subcomponent binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:70,868,672...70,873,852
Ensembl chr11:70,868,662...70,873,852
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in IMP
IBA
ISO
IDA
(MGI:6241455|PMID:30356214)
(MGI:6370284|PMID:31544964)
UniProt
GO_Central
MGI
PMID:30356214 PMID:31544964 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6241455 MGI:6370284 NCBI chr 9:78,337,800...78,350,519
Ensembl chr 9:78,337,808...78,350,519
JBrowse link
G Csnk2a1 casein kinase 2, alpha 1 polypeptide involved_in ISO (PMID:28512243) UniProt PMID:28512243 NCBI chr 2:152,068,468...152,123,772
Ensembl chr 2:152,068,759...152,123,772
JBrowse link
G Fancb Fanconi anemia, complementation group B involved_in
acts_upstream_of_or_within
IBA
IGI
(PMID:25520194) GO_Central
MGI
PMID:25520194 GO_REF:0000033 NCBI chr  X:163,763,678...163,780,266
Ensembl chr  X:163,763,588...163,780,268
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IMP
ISO
(MGI:5566975|PMID:24108124) UniProt
MGI
PMID:24108124 GO_REF:0000119 MGI:4834177 MGI:5566975 NCBI chr 2:11,747,384...11,782,396
Ensembl chr 2:11,747,384...11,782,393
JBrowse link
G Helb helicase (DNA) B involved_in IMP
IBA
ISO
(MGI:5766842|PMID:26774285) UniProt
GO_Central
MGI
PMID:26774285 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5766842 NCBI chr10:119,919,513...119,948,917
Ensembl chr10:119,919,513...119,948,892
JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265
JBrowse link
G Klhl15 kelch-like 15 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:93,275,884...93,321,330
Ensembl chr  X:93,278,205...93,321,330
JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:124,577,980...124,600,371
Ensembl chr 5:124,577,993...124,600,371
JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156
JBrowse link
G Magef1 MAGE family member F1 involved_in ISO (PMID:29225034) UniProt PMID:29225034 NCBI chr16:21,150,650...21,152,106
Ensembl chr16:21,151,396...21,151,879
Ensembl chr16:21,151,396...21,151,879
JBrowse link
G Parpbp PARP1 binding protein involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:87,927,260...87,982,831
Ensembl chr10:87,927,294...87,982,803
JBrowse link
G Plk1 polo like kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096
JBrowse link
G Polq polymerase (DNA directed), theta involved_in IMP
ISO
IDA
(MGI:5920742|PMID:28687761)
(MGI:5621198|PMID:25642960), (MGI:6869820|PMID:29058711)
UniProt
MGI
PMID:25642960 PMID:28687761 PMID:29058711 GO_REF:0000119 MGI:4834177 MGI:5621198 MGI:5920742 MGI:6869820 NCBI chr16:36,832,104...36,922,321
Ensembl chr16:36,832,148...36,915,779
JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:138,381,116...138,455,333
Ensembl chr  X:138,381,116...138,455,331
JBrowse link
G Recql5 RecQ protein-like 5 acts_upstream_of_or_within IGI (PMID:25520194) MGI PMID:25520194 NCBI chr11:115,783,421...115,824,339
Ensembl chr11:115,783,421...115,824,303
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP
ISO
(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305) UniProt
MGI
PMID:23306437 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5468037 MGI:5476381 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395
JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:10,652,923...10,661,099
Ensembl chr16:10,652,923...10,710,830
JBrowse link
G Senp3 SUMO/sentrin specific peptidase 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,563,936...69,572,910
Ensembl chr11:69,563,941...69,572,910
JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975
JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450
JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947
JBrowse link
G Smchd1 SMC hinge domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338
JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 involved_in IDA
ISO
IMP
(MGI:5887194|PMID:20362325)
(MGI:5476381|PMID:23333305)
UniProt
MGI
PMID:20362325 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5476381 MGI:5887194 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888
JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:88,460,984...88,477,032
Ensembl chr 3:88,461,065...88,477,032
JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,238,310...134,251,233
Ensembl chr 4:134,238,310...134,251,238
JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:34,848,706...34,855,024
Ensembl chr 6:34,848,706...34,854,995
JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
G Hsf1 heat shock factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113
JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:14,695,971...14,748,421
Ensembl chr 9:14,695,950...14,748,419
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:4,756,975...4,758,892
Ensembl chr16:4,756,625...4,758,896
JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA-glycosylase 1 acts_upstream_of_or_within ISO (PMID:19506022) MGI PMID:19506022 NCBI chr 6:113,303,959...113,311,149
Ensembl chr 6:113,303,933...113,312,029
JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168, member A involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:100,355,594...100,490,853
Ensembl chr 7:100,355,842...100,490,863
JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:99,127,103...99,132,916
Ensembl chr 7:99,127,103...99,132,945
JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 BRCA1 A complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,952,668...100,968,816
Ensembl chr 5:100,953,058...100,968,831
JBrowse link
G Actl6a actin-like 6A involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122
JBrowse link
G Actr5 ARP5 actin-related protein 5 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 2:158,466,800...158,481,131
Ensembl chr 2:158,466,808...158,481,131
JBrowse link
G Actr8 ARP8 actin-related protein 8 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr14:29,700,294...29,717,409
Ensembl chr14:29,700,294...29,728,311
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in IMP (MGI:3698695|PMID:17121854) UniProt PMID:17121854 MGI:3698695 NCBI chr 7:105,207,691...105,231,151
Ensembl chr 7:105,207,690...105,230,860
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:71,848,809...71,857,416
Ensembl chr 8:71,849,505...71,857,263
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:31,855,394...32,242,083
Ensembl chr 5:31,855,028...32,242,306
JBrowse link
G Brca1 breast cancer 1, early onset involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:74,460,234...74,499,307
Ensembl chr  X:74,460,234...74,497,607
JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:108,534,905...108,536,021
Ensembl chr10:108,534,625...108,536,021
JBrowse link
G Cbx8 chromobox 8 involved_in ISO RGD
MGI
PMID:23572236 GO_REF:0000096 MGI:4417868 RGD:9586727 NCBI chr11:118,929,262...118,931,739
Ensembl chr11:118,927,131...118,931,795
JBrowse link
G Ccdc117 coiled-coil domain containing 117 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:5,478,887...5,492,217
Ensembl chr11:5,478,887...5,492,187
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS (MGI:3690192|PMID:16255782) UniProt PMID:16255782 MGI:3690192 NCBI chr 7:34,745,847...34,755,991
Ensembl chr 7:34,745,847...34,755,998
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947
JBrowse link
G Ercc8 excision repaiross-complementing rodent repair deficiency, complementation group 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:108,295,246...108,337,738
Ensembl chr13:108,295,265...108,331,898
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:165,436,892...165,613,645
Ensembl chr 2:165,436,952...165,613,647
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:132,366,303...132,452,076
Ensembl chr 4:132,366,298...132,452,076
JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:22,978,861...23,226,785
Ensembl chr10:22,978,862...23,226,684
JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Ino80 INO80 complex subunit involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168
JBrowse link
G Ino80b INO80 complex subunit B involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 6:83,098,746...83,102,100
Ensembl chr 6:83,098,746...83,102,412
JBrowse link
G Ino80c INO80 complex subunit C involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr18:24,237,818...24,254,876
Ensembl chr18:24,237,814...24,255,010
JBrowse link
G Ino80d INO80 complex subunit D involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 1:63,086,960...63,153,693
Ensembl chr 1:62,997,577...63,153,849
JBrowse link
G Ino80e INO80 complex subunit E involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:126,450,756...126,461,544
Ensembl chr 7:126,450,132...126,461,549
JBrowse link
G Mcrs1 microspherule protein 1 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr15:99,140,698...99,149,838
Ensembl chr15:99,140,698...99,149,842
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO RGD
MGI
PMID:1945835 GO_REF:0000096 MGI:4417868 RGD:729332 NCBI chr 7:136,496,315...136,732,001
Ensembl chr 7:136,496,343...136,731,995
JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 9:31,297,476...31,332,629
Ensembl chr 9:31,297,488...31,332,629
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:39,233,013...39,402,321
Ensembl chr 1:39,232,812...39,402,317
JBrowse link
G Parg poly (ADP-ribose) glycohydrolase involved_in ISO RGD
MGI
PMID:15158362 GO_REF:0000096 MGI:4417868 RGD:2316739 NCBI chr14:31,923,900...32,020,671
Ensembl chr14:31,923,906...32,019,507
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:132,091,206...132,095,100
Ensembl chr 2:132,091,082...132,095,234
JBrowse link
G Pnp purine-nucleoside phosphorylase acts_upstream_of_or_within IMP (PMID:10859343) MGI PMID:10859343 NCBI chr14:51,181,760...51,190,869
Ensembl chr14:51,168,539...51,190,869
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965
JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:99,127,103...99,132,916
Ensembl chr 7:99,127,103...99,132,945
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483
JBrowse link
G Smchd1 SMC hinge domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338
JBrowse link
G Tfpt TCF3 (E2A) fusion partner involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:3,623,323...3,632,911
Ensembl chr 7:3,623,323...3,632,928
JBrowse link
G Tigar Trp53 induced glycolysis regulatory phosphatase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:127,062,079...127,086,564
Ensembl chr 6:127,062,079...127,086,520
JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:70,624,979...70,636,331
Ensembl chr 8:70,625,006...70,636,331
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519
JBrowse link
G Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 involved_in ISO RGD
MGI
PMID:12750002 GO_REF:0000096 MGI:4417868 RGD:1299567 NCBI chr16:15,368,850...15,412,382
Ensembl chr16:15,369,941...15,413,637
JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:55,175,693...55,248,176
Ensembl chr13:55,175,693...55,248,113
JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081
JBrowse link
G Yy1 YY1 transcription factor involved_in IDA (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509
JBrowse link
G Actl6a actin-like 6A involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122
JBrowse link
G Actl6b actin-like 6B involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 5:137,551,784...137,567,844
Ensembl chr 5:137,551,779...137,567,844
JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080
JBrowse link
G Arid1b AT-rich interaction domain 1B involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr17:5,044,481...5,397,931
Ensembl chr17:5,044,607...5,397,931
JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873
JBrowse link
G Bcl7a B cell CLL/lymphoma 7A involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 5:123,482,511...123,512,146
Ensembl chr 5:123,481,897...123,513,055
JBrowse link
G Bcl7b B cell CLL/lymphoma 7B involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 5:135,197,226...135,210,706
Ensembl chr 5:135,197,137...135,210,709
JBrowse link
G Bcl7c B cell CLL/lymphoma 7C involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 7:127,260,626...127,307,938
Ensembl chr 7:127,260,628...127,308,105
JBrowse link
G Brd7 bromodomain containing 7 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr 8:89,056,522...89,089,249
Ensembl chr 8:89,057,667...89,088,822
JBrowse link
G Ddx11 DEAD/H box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chr17:66,430,508...66,459,169
Ensembl chr17:66,430,515...66,459,169
JBrowse link
G Dpf1 double PHD fingers 1 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr 7:29,003,366...29,017,017
Ensembl chr 7:29,003,376...29,017,668
JBrowse link
G Dpf2 double PHD fingers 2 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr19:5,946,544...5,962,899
Ensembl chr19:5,946,544...5,963,038
JBrowse link
G Dpf3 double PHD fingers 3 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr12:83,260,525...83,534,510
Ensembl chr12:83,260,519...83,534,490
JBrowse link
G Fmn2 formin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:174,324,079...174,650,295
Ensembl chr 1:174,329,391...174,650,295
JBrowse link
G Foxm1 forkhead box M1 involved_in IMP
ISO
(MGI:3698692|PMID:17101782) UniProt
MGI
PMID:17101782 GO_REF:0000119 MGI:3698692 MGI:4834177 NCBI chr 6:128,339,957...128,352,849
Ensembl chr 6:128,339,930...128,353,109
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in IMP (MGI:6467697|PMID:29125140), (MGI:6716977|PMID:33115731) UniProt PMID:29125140 PMID:33115731 MGI:6467697 MGI:6716977 NCBI chr 9:73,008,660...73,013,915
Ensembl chr 9:73,009,118...73,011,720
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:136,496,315...136,732,001
Ensembl chr 7:136,496,343...136,731,995
JBrowse link
G Ooep oocyte expressed protein involved_in IMP (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007
JBrowse link
G Pbrm1 polybromo 1 involved_in NAS (MGI:6867129|PMID:25066234) ComplexPortal PMID:25066234 MGI:6867129 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549
JBrowse link
G Phf10 PHD finger protein 10 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr17:15,165,269...15,181,550
Ensembl chr17:15,165,271...15,181,535
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483
JBrowse link
G Sirt6 sirtuin 6 involved_in IDA
ISO
(MGI:7258357|PMID:31002797) UniProt
MGI
PMID:31002797 GO_REF:0000119 MGI:4834177 MGI:7258357 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631
JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:77,191,207...77,283,632
Ensembl chr13:77,191,207...77,283,592
JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:44,906,948...44,972,225
Ensembl chr19:44,919,558...44,972,225
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr10:75,732,603...75,757,448
Ensembl chr10:75,732,603...75,757,451
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr10:128,294,823...128,326,460
Ensembl chr10:128,295,117...128,326,351
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr15:99,600,175...99,611,872
Ensembl chr15:99,600,010...99,611,872
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr11:106,153,997...106,163,810
Ensembl chr11:106,154,005...106,163,798
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in NAS (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 MGI:6867148 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in NAS (MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743) ComplexPortal PMID:16932743 PMID:25066234 MGI:6867129 MGI:6867148 NCBI chr11:99,099,873...99,121,843
Ensembl chr11:99,099,873...99,121,843
JBrowse link
G Spidr scaffolding protein involved in DNA repair involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715
JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:67,621,279...67,745,880
Ensembl chr18:67,621,279...67,743,860
JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:124,059,452...124,096,257
Ensembl chr 8:124,059,452...124,096,254
JBrowse link
G Timeless timeless circadian clock 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519
JBrowse link
G Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,368,850...15,412,382
Ensembl chr16:15,369,941...15,413,637
JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081
JBrowse link
G Zcwpw1 zinc finger, CW type with PWWP domain 1 involved_in IMP (MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380), (MGI:6467709|PMID:32744506) ARUK-UCL PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 MGI:6358520 MGI:6442007 MGI:6443266 MGI:6467709 NCBI chr 5:137,785,593...137,820,883
Ensembl chr 5:137,786,060...137,820,883
JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509
JBrowse link
G Actl6a actin-like 6A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122
JBrowse link
G Actr2 actin related protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:20,012,304...20,062,951
Ensembl chr11:20,012,304...20,062,913
JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873
JBrowse link
G Blm Bloom syndrome, RecQ like helicase acts_upstream_of_or_within IGI (PMID:25520194) MGI PMID:25520194 NCBI chr 7:80,104,839...80,184,896
Ensembl chr 7:80,104,481...80,184,867
JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:34,731,668...34,757,916
Ensembl chr18:34,731,668...34,757,654
JBrowse link
G Crebbp CREB binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:117,531,878...117,539,450
Ensembl chr 4:117,531,878...117,539,470
JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:110,812,239...110,918,583
Ensembl chr 5:110,812,239...110,918,583
JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108
JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:49,341,498...49,441,954
Ensembl chr 2:49,341,498...49,441,960
JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947
JBrowse link
G Fancb Fanconi anemia, complementation group B acts_upstream_of_or_within
involved_in
IGI
IBA
(PMID:25520194) MGI
GO_Central
PMID:25520194 GO_REF:0000033 NCBI chr  X:163,763,678...163,780,266
Ensembl chr  X:163,763,588...163,780,268
JBrowse link
G Fus fused in sarcoma involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:127,565,276...127,581,204
Ensembl chr 7:127,566,629...127,584,873
JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:56,386,661...56,407,605
Ensembl chr17:56,386,634...56,407,607
JBrowse link
G Helq helicase, POLQ-like involved_in IDA (MGI:5547892|PMID:24005329) UniProt PMID:24005329 MGI:5547892 NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464
JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:21,948,002...21,976,037
Ensembl chr 6:21,949,570...21,976,037
JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in IMP
ISO
(MGI:6716962|PMID:25936915) UniProt
MGI
PMID:25936915 GO_REF:0000119 MGI:4834177 MGI:6716962 NCBI chr 9:73,008,660...73,013,915
Ensembl chr 9:73,009,118...73,011,720
JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:93,776,635...93,837,815
Ensembl chr11:93,776,678...93,837,811
JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:124,978,883...125,007,031
Ensembl chr 4:124,978,927...125,007,031
JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:89,973,722...89,996,873
Ensembl chr 9:89,973,718...89,996,827
JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:135,633,691...135,644,435
Ensembl chr  X:135,633,691...135,644,439
JBrowse link
G Mrgbp MRG/MORF4L binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:180,222,990...180,228,097
Ensembl chr 2:180,223,097...180,228,097
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:50,065,678...50,090,943
Ensembl chr11:50,065,271...50,090,942
JBrowse link
G Ooep oocyte expressed protein involved_in IMP (MGI:6272426|PMID:29955025) UniProt PMID:29955025 MGI:6272426 NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007
JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819
JBrowse link
G Peli1 pellino 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:21,041,283...21,100,327
Ensembl chr11:21,041,291...21,100,323
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,989,795...81,003,554
Ensembl chr10:80,989,100...81,003,757
JBrowse link
G Prmt1 protein arginine N-methyltransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550
JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:79,594,349...79,607,282
Ensembl chr10:79,594,349...79,602,786
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520
JBrowse link
G Skp2 S-phase kinase-associated protein 2 involved_in IDA
ISO
(MGI:5438910|PMID:22464731) UniProt
MGI
PMID:22464731 GO_REF:0000119 MGI:4834177 MGI:5438910 NCBI chr15:9,112,070...9,155,512
Ensembl chr15:9,112,073...9,155,512
JBrowse link
G Timeless timeless circadian clock 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810
JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588
JBrowse link
G Vps72 vacuolar protein sorting 72 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:95,018,353...95,030,362
Ensembl chr 3:95,018,333...95,030,362
JBrowse link
G Was Wiskott-Aldrich syndrome involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:7,947,705...7,956,730
Ensembl chr  X:7,947,692...7,956,737
JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:119,723,961...119,755,652
Ensembl chr 9:119,723,944...119,755,653
JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081
JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:117,051,046...117,060,412
Ensembl chr10:117,051,126...117,060,412
JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh1 fumarate hydratase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201
JBrowse link
G Kdm4d lysine (K)-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr 9:14,373,844...14,411,818
Ensembl chr 9:14,373,844...14,411,778
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:3,816,436...3,868,303
Ensembl chr19:3,817,421...3,868,303
JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:4,743,091...4,750,513
Ensembl chr 7:4,743,114...4,750,513
JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in NAS
ISO
(MGI:6156517|PMID:29656893) ComplexPortal
MGI
PMID:29656893 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156
JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:106,347,521...106,354,148
Ensembl chr 9:106,347,521...106,354,148
JBrowse link
G Pnkp polynucleotide kinase 3'- phosphatase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,505,903...44,514,761
Ensembl chr 7:44,506,563...44,512,416
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP
ISO
(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305) CACAO
MGI
PMID:23306437 PMID:23333305 GO_REF:0000119 MGI:4834177 MGI:5468037 MGI:5476381 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395
JBrowse link
G Setmar SET domain without mariner transposase fusion involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:108,042,006...108,054,088
Ensembl chr 6:108,042,006...108,054,083
JBrowse link
G Shld1 shieldin complex subunit 1 involved_in NAS
ISO
IBA
(MGI:6156517|PMID:29656893) ComplexPortal
MGI
GO_Central
PMID:29656893 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975
JBrowse link
G Shld2 shieldin complex subunit 2 involved_in NAS
ISO
(MGI:6156517|PMID:29656893) ComplexPortal
MGI
PMID:29656893 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450
JBrowse link
G Shld3 shieldin complex subunit 3 involved_in NAS
ISO
IBA
(MGI:6156517|PMID:29656893) ComplexPortal
MGI
GO_Central
PMID:29656893 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6156517 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947
JBrowse link
G Smchd1 SMC hinge domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338
JBrowse link
G Top2b topoisomerase (DNA) II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chr14:6,038,976...6,104,585
Ensembl chr14:6,034,301...6,104,584
JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081
JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:89,007,506...89,012,903
Ensembl chr15:89,007,510...89,012,903
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:3,352,038...3,379,615
Ensembl chr 7:3,337,704...3,379,615
JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in IGI
ISO
(MGI:5902647|PMID:28002403) UniProt
MGI
PMID:28002403 GO_REF:0000119 MGI:4834177 MGI:5902647 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819
JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 involved_in IGI
ISO
(MGI:5902647|PMID:28002403) UniProt
MGI
PMID:28002403 GO_REF:0000119 MGI:4834177 MGI:5902647 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865
JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819
JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509
JBrowse link
G Actl6a actin-like 6A involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122
JBrowse link
G Atr ataxia telangiectasia and Rad3 related involved_in NAS (MGI:6828548|PMID:11721054) ComplexPortal PMID:11721054 MGI:6828548 NCBI chr 9:95,739,655...95,834,813
Ensembl chr 9:95,739,650...95,833,834
JBrowse link
G Atrip ATR interacting protein involved_in NAS (MGI:6828548|PMID:11721054) ComplexPortal PMID:11721054 MGI:6828548 NCBI chr 9:108,888,815...108,903,192
Ensembl chr 9:108,887,001...108,903,192
JBrowse link
G Brd8 bromodomain containing 8 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr18:34,731,668...34,757,916
Ensembl chr18:34,731,668...34,757,654
JBrowse link
G Dek DEK proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IBA
MGI
GO_Central
GO_REF:0000008 GO_REF:0000033 NCBI chr13:47,238,243...47,261,134
Ensembl chr13:47,238,251...47,259,677
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 4:117,531,878...117,539,450
Ensembl chr 4:117,531,878...117,539,470
JBrowse link
G Ep400 E1A binding protein p400 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 5:110,812,239...110,918,583
Ensembl chr 5:110,812,239...110,918,583
JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108
JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 2:49,341,498...49,441,954
Ensembl chr 2:49,341,498...49,441,960
JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 6:21,948,002...21,976,037
Ensembl chr 6:21,949,570...21,976,037
JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265
JBrowse link
G Mbtd1 mbt domain containing 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr11:93,776,635...93,837,815
Ensembl chr11:93,776,678...93,837,811
JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 4:124,978,883...125,007,031
Ensembl chr 4:124,978,927...125,007,031
JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 9:89,973,722...89,996,873
Ensembl chr 9:89,973,718...89,996,827
JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr  X:135,633,691...135,644,435
Ensembl chr  X:135,633,691...135,644,439
JBrowse link
G Mrgbp MRG/MORF4L binding protein involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 2:180,222,990...180,228,097
Ensembl chr 2:180,223,097...180,228,097
JBrowse link
G Pml promyelocytic leukemia involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:58,125,359...58,157,077
Ensembl chr 9:58,125,359...58,157,069
JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668
JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:100,810,596...100,846,891
Ensembl chr 6:100,810,583...100,846,895
JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:29,118,053...29,170,797
Ensembl chr11:29,122,890...29,170,797
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520
JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588
JBrowse link
G Vps72 vacuolar protein sorting 72 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr 3:95,018,353...95,030,362
Ensembl chr 3:95,018,333...95,030,362
JBrowse link
G Yeats4 YEATS domain containing 4 involved_in NAS (MGI:6870966|PMID:14966270) ComplexPortal PMID:14966270 MGI:6870966 NCBI chr10:117,051,046...117,060,412
Ensembl chr10:117,051,126...117,060,412
JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:36,619,935...36,637,897
Ensembl chr 9:36,619,778...36,638,361
JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:11,737,429...11,758,962
Ensembl chr11:11,737,431...11,758,962
JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034
JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668
JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:100,810,596...100,846,891
Ensembl chr 6:100,810,583...100,846,895
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550
JBrowse link
G Rpa2 replication protein A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:132,495,671...132,506,057
Ensembl chr 4:132,495,643...132,506,063
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:180,961,504...180,998,409
Ensembl chr 2:180,961,532...180,998,409
JBrowse link
G Setd2 SET domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701
JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450
JBrowse link
G Shld3 shieldin complex subunit 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631
JBrowse link
G Spidr scaffolding protein involved in DNA repair involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715
JBrowse link
G Terf2ip telomeric repeat binding factor 2, interacting protein involved_in IMP (MGI:4440768|PMID:20339076) UniProt PMID:20339076 MGI:4440768 NCBI chr 8:112,737,991...112,747,160
Ensembl chr 8:112,738,030...112,747,160
JBrowse link
G Tex15 testis expressed gene 15 meiosis and synapsis associated involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:18283110) GO_Central
MGI
PMID:18283110 GO_REF:0000033 NCBI chr 8:34,006,712...34,082,531
Ensembl chr 8:34,006,766...34,075,610
JBrowse link
G Usp51 ubiquitin specific protease 51 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:151,789,433...151,794,360
Ensembl chr  X:151,789,465...151,792,412
JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:67,721,935...67,748,492
Ensembl chr10:67,721,933...67,748,492
JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr11:20,012,304...20,062,951
Ensembl chr11:20,012,304...20,062,913
JBrowse link
G Dek DEK proto-oncogene acts_upstream_of_or_within IMP (PMID:21653549) MGI PMID:21653549 NCBI chr13:47,238,243...47,261,134
Ensembl chr13:47,238,251...47,259,677
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:50,065,678...50,090,943
Ensembl chr11:50,065,271...50,090,942
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:23241889) MGI PMID:23241889 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319
JBrowse link
G Pot1a protection of telomeres 1A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:25,743,939...25,809,280
Ensembl chr 6:25,743,736...25,809,245
JBrowse link
G Pot1b protection of telomeres 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:55,958,190...56,019,647
Ensembl chr17:55,958,951...56,019,628
JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975
JBrowse link
G Usp51 ubiquitin specific protease 51 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:151,789,433...151,794,360
Ensembl chr  X:151,789,465...151,792,412
JBrowse link
G Was Wiskott-Aldrich syndrome NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr  X:7,947,705...7,956,730
Ensembl chr  X:7,947,692...7,956,737
JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609
JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509
JBrowse link
G Actl6a actin-like 6A involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122
JBrowse link
G Actl6b actin-like 6B involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 5:137,551,784...137,567,844
Ensembl chr 5:137,551,779...137,567,844
JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080
JBrowse link
G Arid1b AT-rich interaction domain 1B involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr17:5,044,481...5,397,931
Ensembl chr17:5,044,607...5,397,931
JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873
JBrowse link
G Bcl7a B cell CLL/lymphoma 7A involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 5:123,482,511...123,512,146
Ensembl chr 5:123,481,897...123,513,055
JBrowse link
G Bcl7b B cell CLL/lymphoma 7B involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 5:135,197,226...135,210,706
Ensembl chr 5:135,197,137...135,210,709
JBrowse link
G Bcl7c B cell CLL/lymphoma 7C involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 7:127,260,626...127,307,938
Ensembl chr 7:127,260,628...127,308,105
JBrowse link
G Brd7 bromodomain containing 7 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 8:89,056,522...89,089,249
Ensembl chr 8:89,057,667...89,088,822
JBrowse link
G Cul4a cullin 4A acts_upstream_of_or_within IMP (PMID:19481525) MGI PMID:19481525 NCBI chr 8:13,155,623...13,197,940
Ensembl chr 8:13,155,621...13,197,940
JBrowse link
G Dpf1 double PHD fingers 1 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 7:29,003,366...29,017,017
Ensembl chr 7:29,003,376...29,017,668
JBrowse link
G Dpf2 double PHD fingers 2 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr19:5,946,544...5,962,899
Ensembl chr19:5,946,544...5,963,038
JBrowse link
G Dpf3 double PHD fingers 3 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr12:83,260,525...83,534,510
Ensembl chr12:83,260,519...83,534,490
JBrowse link
G Hmgb1 high mobility group box 1 involved_in IMP (MGI:3807115|PMID:18650382) UniProt PMID:18650382 MGI:3807115 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299
JBrowse link
G Kat7 K(lysine) acetyltransferase 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:95,162,683...95,201,030
Ensembl chr11:95,165,085...95,201,072
JBrowse link
G Pbrm1 polybromo 1 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549
JBrowse link
G Phf10 PHD finger protein 10 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr17:15,165,269...15,181,550
Ensembl chr17:15,165,271...15,181,535
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within ISO (PMID:19506022) MGI PMID:19506022 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr10:75,732,603...75,757,448
Ensembl chr10:75,732,603...75,757,451
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr10:128,294,823...128,326,460
Ensembl chr10:128,295,117...128,326,351
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr15:99,600,175...99,611,872
Ensembl chr15:99,600,010...99,611,872
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr11:106,153,997...106,163,810
Ensembl chr11:106,154,005...106,163,798
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in NAS (MGI:6867273|PMID:12215535) ComplexPortal PMID:12215535 MGI:6867273 NCBI chr11:99,099,873...99,121,843
Ensembl chr11:99,099,873...99,121,843
JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase family, member 1 acts_upstream_of_or_within IMP (PMID:25378300) MGI PMID:25378300 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819
JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc8 excision repaiross-complementing rodent repair deficiency, complementation group 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:108,295,246...108,337,738
Ensembl chr13:108,295,265...108,331,898
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    regulation of biological process 12727
      regulation of cellular process 12145
        regulation of cellular response to stress 557
          regulation of DNA repair 225
            negative regulation of DNA repair + 40
            positive regulation of DNA repair + 138
            regulation of base-excision repair + 3
            regulation of double-strand break repair + 144
            regulation of error-prone translesion synthesis + 0
            regulation of mismatch repair + 4
            regulation of nucleotide-excision repair + 29
            regulation of single strand break repair + 2
Path 2
Term Annotations click to browse term
  biological_process 28573
    metabolic process 11001
      organic substance metabolic process 10573
        organic cyclic compound metabolic process 5906
          nucleobase-containing compound metabolic process 5390
            nucleic acid metabolic process 4826
              DNA metabolic process 987
                DNA repair 600
                  regulation of DNA repair 225
                    negative regulation of DNA repair + 40
                    positive regulation of DNA repair + 138
                    regulation of base-excision repair + 3
                    regulation of double-strand break repair + 144
                    regulation of error-prone translesion synthesis + 0
                    regulation of mismatch repair + 4
                    regulation of nucleotide-excision repair + 29
                    regulation of single strand break repair + 2
paths to the root