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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of DNA replication
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Accession:GO:0006275 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of DNA replication.



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regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401
JBrowse link
G Actr5 actin related protein 5 involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 3:147,282,461...147,296,110
Ensembl chr 3:147,282,624...147,296,110
JBrowse link
G Actr8 actin related protein 8 involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577
JBrowse link
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:19150984) RGD PMID:19150984 NCBI chr14:17,723,239...17,862,625
Ensembl chr14:17,721,932...17,862,617
JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
G Ccdc88a coiled coil domain containing 88A involved_in ISO (MGI:3581096|PMID:15753085) RGD PMID:15753085 MGI:3581096 NCBI chr14:103,104,091...103,256,112
Ensembl chr14:103,103,513...103,252,368
JBrowse link
G Ccna2 cyclin A2 involved_in ISO (PMID:17234884) RGD PMID:17234884 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Chrac1 chromatin accessibility complex subunit 1 involved_in ISO
IEA
(PMID:12434153)
GO_REF:0000107
RGD
Ensembl
PMID:12434153 GO_REF:0000107 NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in ISO (PMID:19907496) RGD PMID:19907496 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 involved_in ISO (PMID:22387026)
(MGI:5424084|PMID:22387026)
RGD PMID:22387026 MGI:5424084 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 involved_in IBA
ISO
PMID:21873635
(PMID:19907496)
RGD PMID:19907496 PMID:21873635 RGD:13792537 NCBI chr18:1,630,560...1,686,803
Ensembl chr18:1,631,954...1,686,942
JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in IBA
ISO
PMID:21873635
(PMID:19907496)
RGD PMID:19907496 PMID:21873635 RGD:13792537 NCBI chr15:40,034,566...40,052,295
Ensembl chr15:40,034,568...40,055,306
JBrowse link
G Fbxo5 F-box protein 5 involved_in ISO (PMID:17234884), (PMID:17485488) RGD PMID:17234884 PMID:17485488 NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437
JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:17234884) RGD PMID:17234884 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein IMP RGD PMID:15966691 RGD:1549434 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Ing5 inhibitor of growth family, member 5 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 9:94,326,919...94,344,220
Ensembl chr 9:94,326,548...94,344,220
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456
JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403
JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242
JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469
JBrowse link
G Jade1 jade family PHD finger 1 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 2:124,543,259...124,596,361
Ensembl chr 2:124,543,286...124,596,354
JBrowse link
G Jade2 jade family PHD finger 2 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr10:36,076,483...36,124,210
Ensembl chr10:36,078,917...36,116,984
JBrowse link
G Jade3 jade family PHD finger 3 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr  X:1,668,873...1,848,781
Ensembl chr  X:1,669,930...1,845,138
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685
JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014
JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229
JBrowse link
G Obi1 ORC ubiquitin ligase 1 involved_in ISO (PMID:31160578) RGD PMID:31160578 NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734
JBrowse link
G Orc3 origin recognition complex, subunit 3 involved_in ISO
IEA
ISS
(PMID:31160578)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31160578 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,123,758...49,181,552
Ensembl chr 5:49,126,955...49,181,633
JBrowse link
G Orc5 origin recognition complex, subunit 5 involved_in ISO (PMID:31160578) RGD PMID:31160578 NCBI chr 4:12,548,007...12,612,611
Ensembl chr 4:12,548,007...12,612,568
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase involved_in ISO (PMID:24726359) RGD PMID:24726359 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19907496)
Ensembl
UniProt
RGD
PMID:19907496 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522
JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 1:65,587,855...65,597,407
Ensembl chr 1:65,582,359...65,611,689
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502
JBrowse link
G Usp37 ubiquitin specific peptidase 37 involved_in ISO (PMID:27296872) RGD PMID:27296872 NCBI chr 9:76,018,863...76,118,732
Ensembl chr 9:76,018,991...76,084,044
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO
IEA
(PMID:25016522)
GO_REF:0000107
RGD
Ensembl
PMID:25016522 GO_REF:0000107 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 involved_in ISO
IEA
ISS
(PMID:24726359)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24726359 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:97,284,617...97,288,518
Ensembl chr 8:97,280,993...97,485,625
JBrowse link
negative regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo5 F-box protein 5 involved_in ISO (PMID:17875940) RGD PMID:17875940 NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437
JBrowse link
negative regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atr ATR serine/threonine kinase involved_in ISO (PMID:14657349) RGD PMID:14657349 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
G Cdan1 codanin 1 involved_in ISO (PMID:22407294) RGD PMID:22407294 NCBI chr 3:107,675,147...107,689,811
Ensembl chr 3:107,673,645...107,689,773
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (PMID:12671034) RGD PMID:12671034 NCBI chr10:104,242,223...104,246,589
Ensembl chr10:104,242,223...104,246,589
JBrowse link
G Gmnc geminin coiled-coil domain containing involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:73,836,255...73,847,698
Ensembl chr11:73,814,533...73,847,328
JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in IBA
ISO
PMID:21873635
(MGI:2388867|PMID:12192004)
(PMID:9635433)
RGD PMID:9635433 PMID:12192004 PMID:21873635 MGI:2388867, RGD:13792537 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
JBrowse link
G Gtpbp4 GTP binding protein 4 involved_in ISO
ISS
(PMID:17210637)
GO_REF:0000024
RGD
HGNC-UCL
PMID:17210637 GO_REF:0000024 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009
JBrowse link
G Hcrt hypocretin neuropeptide precursor IDA in seminiferous tubules at epithelial cycle stage V RGD PMID:16141395 RGD:1600965 NCBI chr10:85,689,992...85,691,206
Ensembl chr10:85,689,465...85,691,210
JBrowse link
G Hmgb1 high mobility group box 1 IDA RGD PMID:18191612 RGD:2316772 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 IMP RGD PMID:12933696 RGD:1626126 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 IMP RGD PMID:9891064 RGD:632686 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645
JBrowse link
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:44,636,581...44,643,730
Ensembl chr 2:44,636,856...44,642,601
JBrowse link
G Pds5a PDS5 cohesin associated factor A involved_in ISO
ISS
(PMID:19907496)
GO_REF:0000024
RGD
UniProt
PMID:19907496 GO_REF:0000024 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in ISO (PMID:14657349) RGD PMID:14657349 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072
JBrowse link
G Slfn13 schlafen family member 13 involved_in ISO (PMID:29395061) RGD PMID:29395061 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383
JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO
IBA
(PMID:11327863)
PMID:21873635
RGD PMID:11327863 PMID:21873635 RGD:13792537 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1926340 (MGI:3032953|PMID:11884608) RGD PMID:11884608 MGI:3032953 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tspyl2 TSPY-like 2 involved_in ISO (PMID:11395479) RGD PMID:11395479 NCBI chr  X:21,439,478...21,445,208
Ensembl chr  X:21,439,478...21,445,089
JBrowse link
G Wapl WAPL cohesin release factor involved_in ISO (PMID:19907496) RGD PMID:19907496 NCBI chr16:10,005,520...10,075,270
Ensembl chr16:10,004,941...10,073,510
JBrowse link
negative regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO
IEA
(PMID:19906994)
GO_REF:0000107
RGD
Ensembl
PMID:19906994 GO_REF:0000107 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:11125146), (PMID:19906994) RGD PMID:11125146 PMID:19906994 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
JBrowse link
negative regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 IMP RGD PMID:23800874 RGD:11557986 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Lig3 DNA ligase 3 involved_in ISO (PMID:21878356) RGD PMID:21878356 NCBI chr10:67,717,796...67,741,141
Ensembl chr10:67,717,812...67,798,414
JBrowse link
positive regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2f7 E2F transcription factor 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5449497|PMID:23064266)
UniProt
Ensembl
RGD
PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5449497|PMID:23064266), (MGI:5449498|PMID:23064264)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23064264 PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 MGI:5449498 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
positive regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 involved_in ISO (PMID:23277426) RGD PMID:23277426 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
JBrowse link
G Atf1 activating transcription factor 1 IMP RGD PMID:11925444 RGD:625519 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670
JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO
IEA
(PMID:12434153)
(MGI:6810810|PMID:12434153)
GO_REF:0000107
RGD
Ensembl
PMID:12434153 GO_REF:0000107 MGI:6810810 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
G Bcar3 BCAR3 adaptor protein, NSP family member involved_in ISO
ISS
(PMID:18722344)
GO_REF:0000024
RGD
UniProt
PMID:18722344 GO_REF:0000024 NCBI chr 2:210,525,260...210,638,674
Ensembl chr 2:210,525,260...210,638,798
JBrowse link
G Brpf3 bromodomain and PHD finger containing, 3 involved_in ISO (PMID:26620551) RGD PMID:26620551 NCBI chr20:6,864,684...6,902,760
Ensembl chr20:6,865,985...6,902,690
JBrowse link
G Cacybp calcyclin binding protein IDA mRNA:increased expression:heart RGD PMID:16440310 RGD:2326117 NCBI chr13:72,437,485...72,447,810
Ensembl chr13:72,437,490...72,450,177
JBrowse link
G Cdc42 cell division cycle 42 IMP RGD PMID:9487126 RGD:2293350 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IMP RGD PMID:19821535 RGD:2316313 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:26842564) RGD PMID:26842564 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Cst3 cystatin C IDA In rat mesangial cells RGD PMID:1540157 RGD:2306501 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
G Ctc1 CST telomere replication complex component 1 involved_in IBA
ISO
PMID:21873635
(MGI:4441245|PMID:19119139)
RGD PMID:19119139 PMID:21873635 MGI:4441245, RGD:13792537 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:24990949) RGD PMID:24990949 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO
IEA
(PMID:18995831)
GO_REF:0000107
RGD
Ensembl
PMID:18995831 GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Egf epidermal growth factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18722344)
UniProt
Ensembl
RGD
PMID:18722344 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Ereg epiregulin involved_in ISS
ISO
IDA
GO_REF:0000024
(MGI:1333540|PMID:9337852), (MGI:3687425|PMID:7706296)
PMID:9990076
(PMID:10681561), (PMID:9337852)
UniProt
RGD
PMID:7706296 PMID:9337852 PMID:10681561 PMID:9990076 GO_REF:0000024 MGI:1333540 MGI:3687425, RGD:632743 NCBI chr14:17,027,287...17,041,062
Ensembl chr14:17,027,287...17,041,062
JBrowse link
G Faf1 Fas associated factor 1 involved_in ISO (PMID:26842564) RGD PMID:26842564 NCBI chr 5:124,426,032...124,790,014
Ensembl chr 5:124,426,062...124,789,977
JBrowse link
G Gli1 GLI family zinc finger 1 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Hras HRas proto-oncogene, GTPase IMP RGD PMID:9487126 RGD:2293350 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Il6 interleukin 6 IMP RGD PMID:15828022 RGD:2306943 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:7513704) RGD PMID:7513704 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:9487126 RGD:2293350 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS
(PMID:26620551)
GO_REF:0000024
RGD
UniProt
PMID:26620551 GO_REF:0000024 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 IDA RGD PMID:15726626 RGD:1357162 NCBI chr 1:181,534,534...181,552,843
Ensembl chr 1:181,534,515...181,552,881
JBrowse link
G Lpin1 lipin 1 IMP RGD PMID:21715287 RGD:38599010 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IMP RGD PMID:9487126 RGD:2293350 NCBI chr10:50,343,227...50,447,956
Ensembl chr10:50,344,915...50,447,993
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IMP RGD PMID:9487126 RGD:2293350 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IDA RGD PMID:1332507 RGD:2316794 NCBI chr 1:47,879,956...47,911,500
Ensembl chr 1:47,880,309...47,911,709
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IMP RGD PMID:17427161 RGD:2317489 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:11481036 RGD:1600909 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in IDA
IBA
lesser effect than Npm1
PMID:21873635
RGD
GO_Central
PMID:11481036 PMID:21873635 RGD:1600909, RGD:13792537 NCBI chr15:45,722,494...45,729,246
Ensembl chr15:45,722,400...45,729,726
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
ISS
(PMID:24939902)
GO_REF:0000024
RGD
UniProt
PMID:24939902 GO_REF:0000024 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Pdgfb platelet derived growth factor subunit B IMP RGD PMID:12084843 RGD:1581760 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Rac1 Rac family small GTPase 1 IMP RGD PMID:9487126 RGD:2293350 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,158...25,717,558
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:12434153)
(MGI:6810810|PMID:12434153)
RGD PMID:12434153 MGI:6810810 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Stn1 STN1 subunit of CST complex involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4441245|PMID:19119139)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19119139 GO_REF:0000024 GO_REF:0000107 MGI:4441245 NCBI chr 1:246,391,311...246,429,844
Ensembl chr 1:246,395,613...246,429,531
JBrowse link
G Tnfaip1 TNF alpha induced protein 1 IDA RGD PMID:15726626 RGD:1357162 NCBI chr10:63,417,774...63,432,466
Ensembl chr10:63,417,775...63,432,466
JBrowse link
G Ucn urocortin IDA RGD PMID:11087261 RGD:1642796 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050
JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:12930902)
UniProt
RGD
PMID:12930902 GO_REF:0000024 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578
JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212
JBrowse link
G Gins1 GINS complex subunit 1 involved_in ISO
IEA
(PMID:17170760)
GO_REF:0000107
RGD
Ensembl
PMID:17170760 GO_REF:0000107 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936
JBrowse link
G Gins2 GINS complex subunit 2 involved_in ISO
IEA
(PMID:17170760)
GO_REF:0000107
RGD
Ensembl
PMID:17170760 GO_REF:0000107 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339
JBrowse link
G Gins3 GINS complex subunit 3 involved_in ISO
IEA
(PMID:17170760)
GO_REF:0000107
RGD
Ensembl
PMID:17170760 GO_REF:0000107 NCBI chr19:9,420,085...9,428,621
Ensembl chr19:9,420,086...9,428,687
JBrowse link
G Gins4 GINS complex subunit 4 involved_in ISO
IEA
(PMID:17170760)
GO_REF:0000107
RGD
Ensembl
PMID:17170760 GO_REF:0000107 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273
JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:8123045 RGD:11535022 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:11595739) RGD PMID:11595739 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in ISO (PMID:10608893), (PMID:19837034), (PMID:19858216), (PMID:26123486) RGD PMID:10608893 PMID:19837034 PMID:19858216 PMID:26123486 NCBI chr10:91,712,586...91,723,008
Ensembl chr10:91,712,586...91,723,008
JBrowse link
G Rfc2 replication factor C subunit 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:12930902)
UniProt
RGD
PMID:12930902 GO_REF:0000024 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557
JBrowse link
G Rfc3 replication factor C subunit 3 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778
JBrowse link
G Rfc4 replication factor C subunit 4 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122
JBrowse link
G Rfc5 replication factor C subunit 5 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312
JBrowse link
positive regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:11125146) RGD PMID:11125146 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
positive regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 acts_upstream_of_or_within ISO MGI:1920234 (MGI:4439421|PMID:20215406) RGD PMID:20215406 MGI:4439421 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403
JBrowse link
G Ciz1 CDKN1A interacting zinc finger protein 1 acts_upstream_of_or_within ISO MGI:104772 (MGI:3513706|PMID:15585571), (MGI:4439421|PMID:20215406) RGD PMID:15585571 PMID:20215406 MGI:3513706 MGI:4439421 NCBI chr 3:15,658,479...15,675,716
Ensembl chr 3:15,658,539...15,673,762
JBrowse link
positive regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Endog endonuclease G involved_in ISO
IEA
(PMID:29719607)
GO_REF:0000107
RGD
Ensembl
PMID:29719607 GO_REF:0000107 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:31550240)
UniProt
RGD
PMID:31550240 GO_REF:0000024 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135
JBrowse link
G Stoml2 stomatin like 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21746876)
UniProt
RGD
PMID:21746876 GO_REF:0000024 NCBI chr 5:57,256,227...57,259,824
Ensembl chr 5:57,256,220...57,259,920
JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:79015|PMID:2161540) RGD PMID:2161540 MGI:79015 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
GO_REF:0000024
(MGI:5568153|PMID:24651726)
UniProt
RGD
PMID:24651726 GO_REF:0000024 MGI:5568153 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Cdc7 cell division cycle 7 involved_in ISO (PMID:15668232) RGD PMID:15668232 NCBI chr14:2,804,660...2,824,796
Ensembl chr14:2,804,661...2,824,778
JBrowse link
G Dbf4 DBF4 zinc finger involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:25,676,570...25,701,152
Ensembl chr 4:25,676,634...25,701,066
JBrowse link
G Dbf4b DBF4 zinc finger B involved_in ISO (PMID:15668232) RGD PMID:15668232 NCBI chr10:87,713,805...87,719,197 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20237820) RGD PMID:20237820 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
JBrowse link
G Wiz WIZ zinc finger involved_in ISO (PMID:23545495) RGD PMID:23545495 NCBI chr 7:11,366,837...11,395,279
Ensembl chr 7:11,367,035...11,395,490
JBrowse link
regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO MGI:3832730 (MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:3831588 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
JBrowse link
regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO (PMID:25901030) RGD PMID:25901030 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO
IBA
(PMID:11125146)
(MGI:2388867|PMID:12192004)
PMID:21873635
RGD PMID:11125146 PMID:12192004 PMID:21873635 MGI:2388867, RGD:13792537 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO
IEA
(PMID:24064211)
GO_REF:0000107
RGD
Ensembl
PMID:24064211 GO_REF:0000107 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS
(PMID:26620551)
GO_REF:0000024
RGD
UniProt
PMID:26620551 GO_REF:0000024 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in ISO
IEA
(PMID:24064211)
GO_REF:0000107
RGD
Ensembl
PMID:24064211 GO_REF:0000107 NCBI chr 2:44,636,581...44,643,730
Ensembl chr 2:44,636,856...44,642,601
JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator involved_in ISO
IBA
(PMID:20116089)
PMID:21873635
RGD PMID:20116089 PMID:21873635 RGD:13792537 NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523
JBrowse link
G Wdr18 WD repeat domain 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,740,245...9,748,041
Ensembl chr 7:9,739,604...9,748,070
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in ISO
IEA
ISS
(PMID:15670210)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15670210 GO_REF:0000024 GO_REF:0000107 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659
JBrowse link
regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl4 methyltransferase like 4 involved_in ISO (PMID:32183942) RGD PMID:32183942 NCBI chr 9:111,440,976...111,523,871
Ensembl chr 9:111,441,027...111,464,749
JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:3583382 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 acts_upstream_of_or_within ISO (MGI:2159541|PMID:11850834) RGD PMID:11850834 MGI:2159541 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Dach1 dachshund family transcription factor 1 involved_in ISO (MGI:5619482|PMID:16980615) RGD PMID:16980615 MGI:5619482 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922
JBrowse link
G Ilkap ILK associated serine/threonine phosphatase IDA RGD PMID:9857069 RGD:632254 NCBI chr 9:91,966,440...91,988,791
Ensembl chr 9:91,966,441...91,988,892
JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122
JBrowse link
replication fork arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slfn13 schlafen family member 13 involved_in ISO (PMID:29395061) RGD PMID:29395061 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383
JBrowse link
G Timeless timeless circadian regulator involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Tipin timeless interacting protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:64,780,741...64,801,355
Ensembl chr 8:64,780,828...64,801,352
JBrowse link
G Tipinl1 TIMELESS interacting protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:113,542,841...113,544,022
Ensembl chr 9:113,543,173...113,605,998
JBrowse link
replication fork protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1930616 (MGI:2683861|PMID:14681210)
Ensembl
RGD
PMID:14681210 GO_REF:0000107 MGI:2683861 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,911,616...30,933,150
Ensembl chr11:30,923,239...30,932,889
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (MGI:5566975|PMID:24108124) RGD PMID:24108124 MGI:5566975 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146
JBrowse link
G Timeless timeless circadian regulator involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Tipin timeless interacting protein involved_in IBA
IEA
PMID:21873635
GO_REF:0000104
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 8:64,780,741...64,801,355
Ensembl chr 8:64,780,828...64,801,352
JBrowse link
G Tipinl1 TIMELESS interacting protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:113,542,841...113,544,022
Ensembl chr 9:113,543,173...113,605,998
JBrowse link
G Zfp830 zinc finger protein 830 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:4950701|PMID:21191184)
PMID:21873635
UniProt
RGD
PMID:21191184 PMID:21873635 GO_REF:0000024 MGI:4950701, RGD:13792537 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in IBA
ISO
PMID:21873635
(PMID:22704558), (PMID:22705370)
RGD PMID:22704558 PMID:22705370 PMID:21873635 RGD:13792537 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      regulation of metabolic process 6831
        regulation of macromolecule metabolic process 6326
          regulation of DNA metabolic process 515
            regulation of DNA replication 143
              negative regulation of DNA replication + 31
              positive regulation of DNA replication + 54
              regulation of DNA-templated DNA replication + 56
Path 2
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      cellular metabolic process 10675
        cellular aromatic compound metabolic process 5675
          nucleobase-containing compound metabolic process 5452
            nucleic acid metabolic process 4971
              DNA metabolic process 998
                regulation of DNA metabolic process 515
                  regulation of DNA replication 143
                    negative regulation of DNA replication + 31
                    positive regulation of DNA replication + 54
                    regulation of DNA-templated DNA replication + 56
paths to the root