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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA-templated DNA replication
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Accession:GO:0006261 term browser browse the term
Definition:A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands.
Synonyms:exact_synonym: DNA-dependent DNA replication
 alt_id: GO:0006262;   GO:0006263


show annotations for term's descendants           Sort by:
DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAZ1A bromodomain adjacent to zinc finger domain 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:13,604,694...13,694,508
Ensembl chr 8:13,605,182...13,693,847 		JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G HELB DNA helicase B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2152689|PMID:11557815) MGI
Ensembl		 PMID:11557815 GO_REF:0000107 MGI:2152689 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
G LOC611847 DNA polymerase delta 4, accessory subunit involved_in ISO (PMID:20334433) RGD
ComplexPortal		 PMID:7503737 PMID:20334433 RGD:2307013 NCBI chr18:50,101,211...50,103,045 JBrowse link
G MCMBP minichromosome maintenance complex binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:29,946,228...29,996,711
Ensembl chr28:29,947,731...29,996,846 		JBrowse link
G ORC6 origin recognition complex subunit 6 acts_upstream_of_or_within ISO (MGI:4453247|PMID:20219456) MGI PMID:20219456 MGI:4453247 NCBI chr15:8,421,297...8,427,972
Ensembl chr15:8,421,318...8,427,821 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IBA		 (PMID:21873635) RGD
GO_Central		 PMID:7503737 PMID:9620226 PMID:21873635 RGD:2299945 RGD:2307013 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:7503737 GO_REF:0000107 RGD:2307013
G POLD3 DNA polymerase delta 3, accessory subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:7503737 GO_REF:0000107 RGD:2307013 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA Ensembl
Ensembl
InterPro
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr11:67,757,779...67,760,417
Ensembl chr11:67,758,918...67,760,374 		JBrowse link
G POLE4 DNA polymerase epsilon 4, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,241,641...48,251,679 JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G POLN DNA polymerase nu involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:951,888...975,966 JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA UniProt GO_REF:0000117 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:6,119,203...6,159,293
Ensembl chr 6:6,119,164...6,160,886 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:6,469,865...6,486,935
Ensembl chr25:6,469,867...6,486,849 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr34:19,361,024...19,377,289
Ensembl chr34:19,361,044...19,377,294 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:14,428,661...14,439,641
Ensembl chr26:14,428,695...14,438,986 		JBrowse link
G RPAIN RPA interacting protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16135809) MGI
Ensembl		 PMID:16135809 GO_REF:0000107 NCBI chr 5:31,359,735...31,366,108
Ensembl chr 5:31,358,594...31,365,971 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:30,820,488...30,872,515
Ensembl chr 8:30,821,096...30,872,512 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZPR1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:16,778,803...16,787,493
Ensembl chr 5:16,778,832...16,787,105 		JBrowse link
DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNE1 cyclin E1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2673102|PMID:12941272) MGI
Ensembl		 PMID:12941272 GO_REF:0000107 MGI:2673102 NCBI chr 1:121,688,622...121,697,533
Ensembl chr 1:121,688,796...121,697,649 		JBrowse link
G CCNE2 cyclin E2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2673102|PMID:12941272) MGI
Ensembl		 PMID:12941272 GO_REF:0000107 MGI:2673102 NCBI chr29:39,534,872...39,551,141
Ensembl chr29:39,534,968...39,546,566 		JBrowse link
G CDC45 cell division cycle 45 involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
G CDC6 cell division cycle 6 involved_in IEA UniProt
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 9:22,303,549...22,317,046
Ensembl chr 9:22,226,719...22,316,963 		JBrowse link
G GMNC geminin coiled-coil domain containing involved_in IEA InterPro GO_REF:0000002 NCBI chr34:22,790,364...22,800,569
Ensembl chr34:22,790,972...22,800,852 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor involved_in IEA
IBA		 (PMID:21873635) InterPro
InterPro
GO_Central		 PMID:21873635 GO_REF:0000002 NCBI chr 2:23,288,249...23,344,060
Ensembl chr 2:23,292,253...23,344,719 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA InterPro
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IBA
IEA		 (PMID:21873635) GO_Central
UniProt
InterPro
UniProt		 PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr10:28,721,421...28,738,457
Ensembl chr10:28,721,660...28,738,390 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IEA UniProt
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IBA
IEA		 (PMID:21873635) GO_Central
InterPro
InterPro		 PMID:21873635 GO_REF:0000002 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G NOC3L NOC3 like DNA replication regulator involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:8,484,224...8,519,840
Ensembl chr28:8,484,226...8,519,692 		JBrowse link
G ORC1 origin recognition complex subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:8,965,339...8,995,527
Ensembl chr15:8,971,732...8,995,481 		JBrowse link
G ORC3 origin recognition complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:47,047,341...47,108,126
Ensembl chr12:47,047,195...47,108,117 		JBrowse link
G ORC4 origin recognition complex subunit 4 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr19:49,728,812...49,815,599
Ensembl chr19:49,728,344...49,815,604 		JBrowse link
G ORC5 origin recognition complex subunit 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:16,088,143...16,183,813
Ensembl chr18:16,088,184...16,166,718 		JBrowse link
G ORC6 origin recognition complex subunit 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:8,421,297...8,427,972
Ensembl chr15:8,421,318...8,427,821 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr18:51,875,860...51,904,492
Ensembl chr18:51,875,903...51,904,746 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:951,888...975,966 JBrowse link
G PRIM2 DNA primase subunit 2 involved_in ISO (PMID:26975377)
(MGI:3687659|PMID:10523676)		 ComplexPortal PMID:10523676 PMID:26975377 MGI:3687659 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:30,517,172...30,578,664
Ensembl chr23:30,516,125...30,578,108 		JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:2445645|PMID:12429860)
(PMID:21873635)		 MGI
GO_Central		 PMID:12429860 PMID:21873635 MGI:2445645 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
DNA replication, Okazaki fragment processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
DNA replication, synthesis of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELB DNA helicase B involved_in IEA InterPro
Ensembl
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr18:51,875,860...51,904,492
Ensembl chr18:51,875,903...51,904,746 		JBrowse link
G POLRMT RNA polymerase mitochondrial involved_in IEA GOC GO_REF:0000108 NCBI chr20:57,908,327...57,920,016
Ensembl chr20:57,908,351...57,920,027 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:951,888...975,966 JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA UniProt
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA InterPro
InterPro
GOC
GOC		 GO_REF:0000002 GO_REF:0000108 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
DNA strand elongation involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM3 minichromosome maintenance complex component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:4084590) UniProt PMID:4084590 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS1 GINS complex subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:1,567,723...1,598,910
Ensembl chr23:1,567,825...1,590,464 		JBrowse link
DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
DNA synthesis involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TK1 thymidine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:2,959,450...2,970,908
Ensembl chr 9:2,959,488...2,971,064 		JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G CDC45 cell division cycle 45 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
G GINS1 GINS complex subunit 1 involved_in ISO (PMID:22474384) ComplexPortal PMID:22474384 NCBI chr23:1,567,723...1,598,910
Ensembl chr23:1,567,825...1,590,464 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,982,033...66,997,115
Ensembl chr 5:66,982,137...67,000,338 		JBrowse link
G GINS3 GINS complex subunit 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:58,233,425...58,244,429
Ensembl chr 2:58,234,321...58,245,219 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:2156014|PMID:10531422)
(PMID:21873635)		 MGI
Ensembl
UniProt
GO_Central		 PMID:10531422 PMID:21873635 GO_REF:0000104 GO_REF:0000107 MGI:2156014 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:21873635)
(MGI:3582148|PMID:15917436)		 GO_Central
Ensembl
MGI		 PMID:15917436 PMID:21873635 GO_REF:0000107 MGI:3582148 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,721,421...28,738,457
Ensembl chr10:28,721,660...28,738,390 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:21873635)
(MGI:3582148|PMID:15917436)		 GO_Central
Ensembl
MGI		 PMID:15917436 PMID:21873635 GO_REF:0000107 MGI:3582148 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:3582148|PMID:15917436)
(PMID:21873635)		 MGI
Ensembl
GO_Central		 PMID:15917436 PMID:21873635 GO_REF:0000107 MGI:3582148 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G PURA purine rich element binding protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,325,630...35,345,366
Ensembl chr 2:35,330,902...35,332,835 		JBrowse link
G RAD51 RAD51 recombinase involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RECQL RecQ like helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G RPA1 replication protein A1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in ISO (PMID:26446790) FlyBase PMID:26446790 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2136707|PMID:11431692) Ensembl
Ensembl
MGI		 PMID:11431692 GO_REF:0000107 MGI:2136707 NCBI chr28:13,672,772...13,680,732
Ensembl chr28:13,676,304...13,680,044 		JBrowse link
lagging strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
leading strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:67,757,779...67,760,417
Ensembl chr11:67,758,918...67,760,374 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,746,637...58,862,550
Ensembl chr 1:58,767,159...58,859,282 		JBrowse link
mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3612004|PMID:16327803) MGI
Ensembl		 PMID:16327803 GO_REF:0000107 MGI:3612004 NCBI chr 6:36,921,941...36,967,718
Ensembl chr 6:36,917,858...36,967,689 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:5,068,147...5,083,941 JBrowse link
G POLG DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:3583846|PMID:15888483)
(PMID:21873635)		 MGI
Ensembl
GO_Central		 PMID:15888483 PMID:21873635 GO_REF:0000107 MGI:3583846 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA
IBA		 (PMID:21873635) Ensembl
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G RNASEH1 ribonuclease H1 acts_upstream_of_or_within ISO (MGI:2655010|PMID:12667461) MGI PMID:12667461 MGI:2655010 NCBI chr17:2,117,446...2,127,893
Ensembl chr17:2,117,446...2,127,893 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714223|PMID:17486094) MGI
Ensembl
Ensembl		 PMID:17486094 GO_REF:0000107 MGI:3714223 NCBI chr13:3,774,725...3,838,576
Ensembl chr13:3,799,025...3,837,934 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G TEFM transcription elongation factor, mitochondrial NOT|involved_in ISO (PMID:21278163) UniProt PMID:21278163 NCBI chr 9:40,860,850...40,868,020
Ensembl chr 9:40,860,938...40,868,020 		JBrowse link
G TK2 thymidine kinase 2 acts_upstream_of_or_within ISO (MGI:3801405|PMID:18434326) MGI PMID:18434326 MGI:3801405 NCBI chr 5:82,730,514...82,758,153
Ensembl chr 5:82,729,150...82,756,457 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr28:13,672,772...13,680,732
Ensembl chr28:13,676,304...13,680,044 		JBrowse link
mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM6 minichromosome maintenance complex component 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
mitotic DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS3 GINS complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:58,233,425...58,244,429
Ensembl chr 2:58,234,321...58,245,219 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IBA
IEA		 (PMID:21873635) GO_Central
InterPro		 PMID:21873635 GO_REF:0000002 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
mitotic DNA replication termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTF2 replication termination factor 2 involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr24:41,665,259...41,706,348
Ensembl chr24:41,665,294...41,706,348 		JBrowse link
mitotic DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RECQL5 RecQ like helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA2 BRCA2 DNA repair associated involved_in ISO (PMID:21076401) BHF-UCL PMID:21076401 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5522574|PMID:24115439) BHF-UCL PMID:24115439 MGI:5522574 NCBI chr24:47,219,977...47,248,791 JBrowse link
negative regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO5 F-box protein 5 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:43,138,338...43,149,546
Ensembl chr 1:43,138,889...43,149,297 		JBrowse link
negative regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
negative regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 ISO RGD PMID:23800874 RGD:11557986 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
nuclear DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:28,192,338...28,209,512 JBrowse link
G ZNF830 zinc finger protein 830 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:4950701|PMID:21191184)
(PMID:21873635)		 MGI
Ensembl
GO_Central		 PMID:21191184 PMID:21873635 GO_REF:0000107 MGI:4950701 NCBI chr 9:38,382,508...38,384,060
Ensembl chr 9:38,382,900...38,384,015 		JBrowse link
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
positive regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2F7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,856,093...19,895,657
Ensembl chr15:19,857,227...19,895,225 		JBrowse link
G E2F8 E2F transcription factor 8 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr21:41,340,410...41,358,261
Ensembl chr21:41,340,969...41,357,206 		JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHTF18 chromosome transmission fidelity factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,806,924...39,815,145
Ensembl chr 6:39,806,673...39,815,333 		JBrowse link
G CHTF8 chromosome transmission fidelity factor 8 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chr 5:80,510,617...80,521,356
Ensembl chr 5:80,509,002...80,520,233 		JBrowse link
G DSCC1 DNA replication and sister chromatid cohesion 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,825,522...18,841,905
Ensembl chr13:18,825,844...18,841,873 		JBrowse link
G GINS1 GINS complex subunit 1 involved_in ISO (PMID:17170760) ComplexPortal PMID:17170760 NCBI chr23:1,567,723...1,598,910
Ensembl chr23:1,567,825...1,590,464 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,982,033...66,997,115
Ensembl chr 5:66,982,137...67,000,338 		JBrowse link
G GINS3 GINS complex subunit 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:58,233,425...58,244,429
Ensembl chr 2:58,234,321...58,245,219 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G NPM1 nucleophosmin 1 ISO RGD PMID:8123045 RGD:11535022 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:6,119,203...6,159,293
Ensembl chr 6:6,119,164...6,160,886 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr25:6,469,865...6,486,935
Ensembl chr25:6,469,867...6,486,849 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr34:19,361,024...19,377,289
Ensembl chr34:19,361,044...19,377,294 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr26:14,428,661...14,439,641
Ensembl chr26:14,428,695...14,438,986 		JBrowse link
positive regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
positive regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4439421|PMID:20215406) MGI
Ensembl
Ensembl		 PMID:20215406 GO_REF:0000107 MGI:4439421 NCBI chr10:300,863...306,546
Ensembl chr10:300,903...305,438 		JBrowse link
G CIZ1 CDKN1A interacting zinc finger protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3513706|PMID:15585571)
(MGI:4439421|PMID:20215406)		 MGI
Ensembl
Ensembl		 PMID:15585571 PMID:20215406 GO_REF:0000107 MGI:3513706 MGI:4439421 NCBI chr 9:55,303,189...55,322,429
Ensembl chr 9:55,303,129...55,318,945 		JBrowse link
positive regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in ISO (PMID:31550240) UniProt PMID:31550240 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G STOML2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,675,963...51,679,313
Ensembl chr11:51,675,963...51,679,199 		JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:79015|PMID:2161540) MGI PMID:2161540 MGI:79015 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G CDC7 cell division cycle 7 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:57,336,165...57,362,478
Ensembl chr 6:57,337,407...57,362,757 		JBrowse link
G DBF4 DBF4 zinc finger involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:13,983,832...14,019,917
Ensembl chr14:13,803,576...14,019,704 		JBrowse link
G DBF4B DBF4 zinc finger B involved_in ISO (PMID:15668232) UniProt PMID:15668232 NCBI chr 9:18,734,678...18,768,128 JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G WIZ WIZ zinc finger involved_in ISO (PMID:23545495) UniProt PMID:23545495 NCBI chr20:46,746,991...46,773,065
Ensembl chr20:46,747,062...46,817,240 		JBrowse link
regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SENP2 SUMO specific peptidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3831588|PMID:19090619) Ensembl
MGI		 PMID:19090619 GO_REF:0000107 MGI:3831588 NCBI chr34:18,325,373...18,357,152
Ensembl chr34:18,325,553...18,356,192 		JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,841,916...25,875,245
Ensembl chr 9:25,842,054...25,873,674 		JBrowse link
G MCIDAS multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:42,577,028...42,583,120
Ensembl chr 2:42,577,039...42,583,011 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 3:52,584,913...52,629,731
Ensembl chr 3:52,584,454...52,629,164 		JBrowse link
G WDR18 WD repeat domain 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:57,712,854...57,717,988
Ensembl chr20:57,712,740...57,718,107 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL4 methyltransferase 4, N6-adenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,229,717...69,268,223
Ensembl chr 7:69,191,223...69,267,683 		JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3583382|PMID:15980864) Ensembl
Ensembl
MGI		 PMID:15980864 GO_REF:0000107 MGI:3583382 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160 		JBrowse link
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 acts_upstream_of_or_within ISO (MGI:2159541|PMID:11850834) MGI PMID:11850834 MGI:2159541 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G DACH1 dachshund family transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:25,690,700...25,934,449
Ensembl chr22:25,726,597...25,934,550 		JBrowse link
G ILKAP ILK associated serine/threonine phosphatase ISO RGD PMID:9857069 RGD:632254 NCBI chr25:48,666,850...48,689,405
Ensembl chr25:48,666,849...48,689,381 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,507,198...29,561,565
Ensembl chr25:29,520,921...29,561,349 		JBrowse link
replication fork arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TIMELESS timeless circadian regulator involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:30,641,557...30,657,353
Ensembl chr30:30,641,555...30,657,260 		JBrowse link
replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor involved_in ISO (PMID:22144908) UniProt PMID:22144908 NCBI chr 9:398,207...402,787
Ensembl chr 9:399,072...402,721 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,821,324...58,834,935
Ensembl chr 1:58,821,521...58,946,475 		JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:66,465,813...66,520,414
Ensembl chr 3:66,474,570...66,519,777 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:2683861|PMID:14681210) MGI PMID:14681210 MGI:2683861 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:55,615,271...55,619,493
Ensembl chr 9:55,615,827...55,620,236 		JBrowse link
G CENPX centromere protein X involved_in IEA Ensembl GO_REF:0000107
G DDX11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) UniProt PMID:26503245 NCBI chr27:42,067,845...42,102,699
Ensembl chr27:42,067,898...42,105,870 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:28,192,338...28,209,512 JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 9:26,342,419...26,350,561
Ensembl chr 9:26,344,438...26,349,997 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO (PMID:17289582) ComplexPortal PMID:17289582 NCBI chr 6:39,127,433...39,129,487 JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr10:66,631,411...66,644,753
Ensembl chr10:66,631,544...66,643,728 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,028,537...43,082,038
Ensembl chr 8:43,042,563...43,187,969 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,584,326...37,595,316 JBrowse link
G FANCM FA complementation group M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr12:35,434,123...35,435,679
Ensembl chr12:35,434,123...35,468,943 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA
IBA		 (PMID:21873635) InterPro
Ensembl
InterPro
GO_Central		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr12:55,584,884...55,713,996
Ensembl chr12:55,588,888...55,713,341 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G OOEP oocyte expressed protein involved_in ISS UniProt
UniProt		 GO_REF:0000024 NCBI chr12:35,431,562...35,449,540
Ensembl chr12:35,448,015...35,449,511 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:85,379,378...85,389,175 JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G RAD51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5442243|PMID:22778135) MGI
Ensembl		 PMID:22778135 GO_REF:0000107 MGI:5442243 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,960,909...76,001,088
Ensembl chr 5:75,960,955...76,000,467 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5522574|PMID:24115439) BHF-UCL PMID:24115439 MGI:5522574 NCBI chr24:47,219,977...47,248,791 JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:20457750), (PMID:22231448), (PMID:24573677) UniProt PMID:20457750 PMID:22231448 PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr37:23,364,941...23,425,206
Ensembl chr37:23,367,220...23,419,248 		JBrowse link
G THOC1 THO complex subunit 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:67,082,100...67,136,592
Ensembl chr 7:67,082,231...67,136,525 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA InterPro GO_REF:0000002 NCBI chr30:30,641,557...30,657,353
Ensembl chr30:30,641,555...30,657,260 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr13:37,846,010...37,857,633
Ensembl chr13:37,846,149...37,857,668 		JBrowse link
G TRAIP TRAF interacting protein involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr20:39,430,109...39,454,437
Ensembl chr20:39,430,489...39,453,933 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
replication fork reversal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARM1 coactivator associated arginine methyltransferase 1 involved_in ISO (PMID:33412112) UniProt PMID:33412112 NCBI chr20:50,328,466...50,371,845
Ensembl chr20:50,331,030...50,348,195 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G FANCM FA complementation group M involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17405
    metabolic process 11345
      organic substance metabolic process 10914
        macromolecule metabolic process 9457
          nucleic acid metabolic process 4929
            DNA metabolic process 970
              DNA replication 263
                DNA-templated DNA replication 149
                  DNA replication initiation + 33
                  DNA replication termination + 1
                  DNA replication, synthesis of RNA primer + 7
                  DNA strand elongation involved in DNA replication + 12
                  DNA unwinding involved in DNA replication + 19
                  DNA-dependent DNA replication DNA ligation + 0
                  DNA-templated DNA replication maintenance of fidelity + 48
                  cell cycle DNA replication + 39
                  mitochondrial DNA replication + 18
                  negative regulation of DNA-templated DNA replication + 7
                  plastid DNA replication 0
                  positive regulation of DNA-templated DNA replication + 15
                  pre-replicative complex assembly + 0
                  regulation of DNA-templated DNA replication + 48
                  replication of extrachromosomal circular DNA 0
                  rolling circle DNA replication 0
                  theta DNA replication 0
Path 2
Term Annotations click to browse term
  biological_process 17405
    metabolic process 11345
      cellular metabolic process 8910
        cellular aromatic compound metabolic process 5607
          nucleobase-containing compound metabolic process 5393
            nucleic acid metabolic process 4929
              DNA metabolic process 970
                DNA replication 263
                  DNA-templated DNA replication 149
                    DNA replication initiation + 33
                    DNA replication termination + 1
                    DNA replication, synthesis of RNA primer + 7
                    DNA strand elongation involved in DNA replication + 12
                    DNA unwinding involved in DNA replication + 19
                    DNA-dependent DNA replication DNA ligation + 0
                    DNA-templated DNA replication maintenance of fidelity + 48
                    cell cycle DNA replication + 39
                    mitochondrial DNA replication + 18
                    negative regulation of DNA-templated DNA replication + 7
                    plastid DNA replication 0
                    positive regulation of DNA-templated DNA replication + 15
                    pre-replicative complex assembly + 0
                    regulation of DNA-templated DNA replication + 48
                    replication of extrachromosomal circular DNA 0
                    rolling circle DNA replication 0
                    theta DNA replication 0
paths to the root