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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA-templated DNA replication
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Accession:GO:0006261 term browser browse the term
Definition:A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands.
Synonyms:exact_synonym: DNA-dependent DNA replication
 alt_id: GO:0006262;   GO:0006263
 xref: Reactome:R-HSA-69306 "DNA Replication"


show annotations for term's descendants           Sort by:
DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAZ1A bromodomain adjacent to zinc finger domain 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:15,510,881...15,632,516
Ensembl chr14:33,699,424...33,804,473 		JBrowse link
G CHRAC1 chromatin accessibility complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:137,180,420...137,185,657
Ensembl chr 8:140,267,024...140,270,757 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:66,344,706...66,356,079
Ensembl chr16:85,681,716...85,691,626 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:40,774,253...40,790,609
Ensembl chr 8:38,224,907...38,240,562 		JBrowse link
G HELB DNA helicase B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11557815) Ensembl
MGI		 PMID:11557815 GO_REF:0000107 NCBI chr12:22,571,448...22,607,417
Ensembl chr12:23,078,732...23,114,134 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr22:16,407,145...16,431,822
Ensembl chr22:34,249,831...34,274,423 		JBrowse link
G MCMBP minichromosome maintenance complex binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:116,396,968...116,441,075
Ensembl chr10:119,813,960...119,857,295 		JBrowse link
G NYNRIN NYN domain and retroviral integrase containing involved_in IEA UniProt GO_REF:0000117 NCBI chr14:5,174,889...5,195,706
Ensembl chr14:23,298,139...23,318,905 		JBrowse link
G ORC6 origin recognition complex subunit 6 acts_upstream_of_or_within ISO (PMID:20219456) MGI PMID:20219456 NCBI chr16:26,954,596...26,962,780
Ensembl chr16:45,846,747...45,854,836 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl		 PMID:7503737 PMID:9620226 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:2299945 RGD:2307013 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:7503737 GO_REF:0000107 RGD:2307013 NCBI chr 7:44,829,040...44,837,928
Ensembl chr 7:44,896,320...44,905,393 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:7503737 GO_REF:0000107 RGD:2307013 NCBI chr11:69,665,642...69,715,879
Ensembl chr11:72,969,844...73,018,295 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:7503737 GO_REF:0000107 GO_REF:0000118 RGD:2307013 NCBI chr11:62,709,988...62,712,038
Ensembl chr11:66,022,395...66,024,442 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr14:30,222,957...30,268,455
Ensembl chr14:48,531,945...48,576,700 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:84,509,237...84,512,651
Ensembl chr 9:112,879,047...112,882,951 		JBrowse link
G POLE4 DNA polymerase epsilon 4, accessory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:75,023,087...75,034,178
Ensembl chr2A:76,526,385...76,537,463 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,574,442...58,593,915
Ensembl chr17:63,667,246...63,686,503 		JBrowse link
G POLN DNA polymerase nu involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:2,214,154...2,385,094
Ensembl chr 4:2,122,309...2,292,431 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000117 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G RFC1 replication factor C subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:33,618,590...33,695,999
Ensembl chr 4:39,471,719...39,548,548 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr 7:81,378,937...81,401,937 JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:15,073,464...15,220,646
Ensembl chr13:33,503,439...33,523,403 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:183,824,865...183,841,895
Ensembl chr 3:192,290,639...192,307,839 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:115,595,398...115,611,442
Ensembl chr12:118,973,560...118,990,308 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:133,670,085...133,682,228
Ensembl chr 7:146,139,837...146,151,495 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:97,588,811...97,595,663
Ensembl chr10:101,065,096...101,071,407 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chr14:35,528,981...35,614,145
Ensembl chr14:53,807,684...53,889,703 		JBrowse link
G WDR18 WD repeat domain 18 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:138,554...150,026
Ensembl chr19:957,937...967,559 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:2,587,170...2,608,179
Ensembl chr 6:2,691,235...2,711,062 		JBrowse link
DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZPR1 ZPR1 zinc finger involved_in ISO (PMID:15767679) UniProt PMID:15767679 NCBI chr11:111,613,940...111,623,539
Ensembl chr11:115,547,973...115,557,883 		JBrowse link
DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNE1 cyclin E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12941272) Ensembl
MGI		 PMID:12941272 GO_REF:0000107 NCBI chr19:26,739,285...26,751,630
Ensembl chr19:35,496,700...35,510,295 		JBrowse link
G CCNE2 cyclin E2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12941272) Ensembl
MGI		 PMID:12941272 GO_REF:0000107 NCBI chr 8:91,499,647...91,518,488
Ensembl chr 8:93,702,104...93,717,151 		JBrowse link
G CDC45 cell division cycle 45 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr22:2,239,040...2,279,807
Ensembl chr22:17,913,729...17,955,195 		JBrowse link
G CDC6 cell division cycle 6 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr17:16,987,721...17,002,488
Ensembl chr17:17,211,681...17,225,972 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:13,165,811...13,215,024
Ensembl chr10:13,138,824...13,187,991 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:124,643,362...124,667,121
Ensembl chr 3:131,950,887...131,974,641 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:51,816,615...51,837,404
Ensembl chr 6:53,085,231...53,105,344 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:44,387,529...44,404,773
Ensembl chr 8:41,778,247...41,794,783 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr22:16,407,145...16,431,822
Ensembl chr22:34,249,831...34,274,423 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr2B:23,986,278...24,023,045
Ensembl chr2B:139,911,909...139,947,687 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 7:92,128,037...92,136,976
Ensembl chr 7:105,561,591...105,570,720 		JBrowse link
G NOC3L NOC3 like DNA replication regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:91,052,341...91,101,068
Ensembl chr10:94,579,840...94,609,405 		JBrowse link
G ORC1 origin recognition complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:51,630,344...51,666,327
Ensembl chr 1:53,238,377...53,273,653 		JBrowse link
G ORC2 origin recognition complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:88,166,351...88,221,618
Ensembl chr2B:206,325,661...206,380,647 		JBrowse link
G ORC3 origin recognition complex subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:85,466,928...85,552,619
Ensembl chr 6:88,741,362...88,829,801 		JBrowse link
G ORC4 origin recognition complex subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:11,841,808...11,931,620
Ensembl chr2B:152,292,822...152,379,487 		JBrowse link
G ORC5 origin recognition complex subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:96,118,272...96,197,216
Ensembl chr 7:108,861,281...108,939,389 		JBrowse link
G ORC6 origin recognition complex subunit 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:26,954,596...26,962,780
Ensembl chr16:45,846,747...45,854,836 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:60,626,555...60,670,716
Ensembl chr11:63,966,531...64,001,335 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,155,541...32,176,363
Ensembl chr12:32,408,929...32,428,734 		JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:56,875,331...56,884,118 JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:69,516,728...69,522,419
Ensembl chr16:89,174,071...89,177,823 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,612,864...24,624,010
Ensembl chr 6:24,944,377...24,955,575 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12429860) Ensembl
TreeGrafter
MGI		 PMID:12429860 GO_REF:0000107 GO_REF:0000118 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
DNA replication termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTF2 replication termination factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:52,806,960...52,874,887
Ensembl chr20:54,094,102...54,147,129 		JBrowse link
DNA replication, Okazaki fragment processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A16 solute carrier family 25 member 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
DNA replication, synthesis of primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELB DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,571,448...22,607,417
Ensembl chr12:23,078,732...23,114,134 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,626,555...60,670,716
Ensembl chr11:63,966,531...64,001,335 		JBrowse link
G POLRMT RNA polymerase mitochondrial involved_in IEA GOC GO_REF:0000108 NCBI chr19:504,823...521,281
Ensembl chr19:584,219...599,783 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr12:32,155,541...32,176,363
Ensembl chr12:32,408,929...32,428,734 		JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chr 6:56,875,331...56,884,118 JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA GOC GO_REF:0000108 NCBI chr 4:176,815,122...176,860,682 JBrowse link
DNA strand elongation involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM3 minichromosome maintenance complex component 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:51,816,615...51,837,404
Ensembl chr 6:53,085,231...53,105,344 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:44,387,529...44,404,773
Ensembl chr 8:41,778,247...41,794,783 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:92,128,037...92,136,976
Ensembl chr 7:105,561,591...105,570,720 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:4084590) UniProt PMID:4084590 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:44,829,040...44,837,928
Ensembl chr 7:44,896,320...44,905,393 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:69,665,642...69,715,879
Ensembl chr11:72,969,844...73,018,295 		JBrowse link
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS1 GINS complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:25,352,711...25,393,926
Ensembl chr20:25,757,555...25,797,829 		JBrowse link
DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXO1 exonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,410,175...217,451,982
Ensembl chr 1:222,389,684...222,431,556 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,181,652...16,274,597
Ensembl chr18:19,811,989...19,903,522 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314 		JBrowse link
DNA synthesis involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:15696186 RGD:2301349 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945 		JBrowse link
G TK1 thymidine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:72,251,416...72,265,308
Ensembl chr17:77,803,749...77,816,747 		JBrowse link
lagging strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:45,056,737...45,110,867
Ensembl chr19:53,706,778...53,761,088 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
leading strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:84,509,237...84,512,651
Ensembl chr 9:112,879,047...112,882,951 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:116,620,188...116,743,435
Ensembl chr 6:120,763,329...120,881,865 		JBrowse link
mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16327803) Ensembl
MGI		 PMID:16327803 GO_REF:0000107 NCBI chr16:3,351,825...3,381,914
Ensembl chr16:4,519,965...4,550,786 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:17,928,751...17,950,907
Ensembl chr20:17,907,241...17,929,214 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15888483) Ensembl
TreeGrafter
MGI
InterPro		 PMID:15888483 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23197651) Ensembl
TreeGrafter
MGI		 PMID:23197651 GO_REF:0000107 GO_REF:0000118 NCBI chr17:58,574,442...58,593,915
Ensembl chr17:63,667,246...63,686,503 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:176,815,122...176,860,682 JBrowse link
G RNASEH1 ribonuclease H1 acts_upstream_of_or_within ISO (PMID:12667461) MGI PMID:12667461 NCBI chr2A:3,550,303...3,578,161
Ensembl chr2A:3,482,772...3,496,978 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,956,528...3,999,205
Ensembl chr11:4,068,119...4,110,474 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17486094) Ensembl
MGI		 PMID:17486094 GO_REF:0000107 NCBI chr 8:98,854,101...98,890,365
Ensembl chr 8:101,019,699...101,052,056 		JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:133,670,085...133,682,228
Ensembl chr 7:146,139,837...146,151,495 		JBrowse link
G TEFM transcription elongation factor, mitochondrial NOT|involved_in ISO (PMID:21278163) UniProt PMID:21278163 NCBI chr17:25,933,934...25,941,220
Ensembl chr17:25,423,956...25,432,198 		JBrowse link
G TK2 thymidine kinase 2 acts_upstream_of_or_within ISO (PMID:18434326) MGI PMID:18434326 NCBI chr16:46,793,679...46,868,508
Ensembl chr16:65,928,102...65,970,315 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:97,588,811...97,595,663
Ensembl chr10:101,065,096...101,071,407 		JBrowse link
mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM6 minichromosome maintenance complex component 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:23,986,278...24,023,045
Ensembl chr2B:139,911,909...139,947,687 		JBrowse link
mitotic DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS3 GINS complex subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:38,653,876...38,672,154
Ensembl chr16:57,790,392...57,801,904 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:124,643,362...124,667,121
Ensembl chr 3:131,950,887...131,974,641 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:51,816,615...51,837,404
Ensembl chr 6:53,085,231...53,105,344 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:44,387,529...44,404,773
Ensembl chr 8:41,778,247...41,794,783 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
mitotic DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:2,239,040...2,279,807
Ensembl chr22:17,913,729...17,955,195 		JBrowse link
mitotic DNA replication termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTF2 replication termination factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:52,806,960...52,874,887
Ensembl chr20:54,094,102...54,147,129 		JBrowse link
mitotic DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RECQL5 RecQ like helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:69,577,778...69,618,068
Ensembl chr17:75,128,325...75,168,254 		JBrowse link
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA2 BRCA2 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen involved_in ISO (PMID:24115439) BHF-UCL PMID:24115439 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:24115439) BHF-UCL PMID:24115439 Ensembl chr20:61,581,331...61,618,718 JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
negative regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO5 F-box protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:150,793,020...150,806,008
Ensembl chr 6:155,481,753...155,494,231 		JBrowse link
negative regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLL1 dynein light chain LC8-type 1 involved_in ISO (PMID:30464262), (PMID:37696958) UniProt PMID:30464262 PMID:37696958 NCBI chr12:118,078,401...118,080,822
Ensembl chr12:121,452,118...121,454,550 		JBrowse link
negative regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,516,728...69,522,419
Ensembl chr16:89,174,071...89,177,823 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,612,864...24,624,010
Ensembl chr 6:24,944,377...24,955,575 		JBrowse link
negative regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 ISO RGD PMID:23800874 RGD:11557986 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
nuclear DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:19,944,692...19,956,140
Ensembl chr21:33,317,841...33,328,132 		JBrowse link
G RPA4 replication protein A4 NOT|involved_in ISO (PMID:19116208), (PMID:19942684) UniProt PMID:19116208 PMID:19942684 NCBI chr  X:86,114,330...86,116,687 JBrowse link
G ZNF830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21191184) Ensembl
TreeGrafter
MGI		 PMID:21191184 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,823,998...21,825,632
Ensembl chr17:22,116,304...22,117,482 		JBrowse link
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:45,056,737...45,110,867
Ensembl chr19:53,706,778...53,761,088 		JBrowse link
positive regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2F7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:74,540,049...74,582,561
Ensembl chr12:77,388,950...77,433,262 		JBrowse link
G E2F8 E2F transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,250,045...19,267,629
Ensembl chr11:19,162,837...19,179,744 		JBrowse link
positive regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641 		JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,516,728...69,522,419
Ensembl chr16:89,174,071...89,177,823 		JBrowse link
positive regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215406) Ensembl
MGI		 PMID:20215406 GO_REF:0000107 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945 		JBrowse link
G CIZ1 CDKN1A interacting zinc finger protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15585571)
(PMID:20215406)		 Ensembl
MGI		 PMID:15585571 PMID:20215406 GO_REF:0000107 NCBI chr 9:99,282,821...99,325,404
Ensembl chr 9:127,956,915...127,982,449 		JBrowse link
positive regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENDOG endonuclease G involved_in ISO (PMID:29719607) UniProt PMID:29719607 NCBI chr 9:99,941,856...99,945,957 JBrowse link
G MTNAP1 mitochondrial nucleoid associated protein 1 involved_in ISO (PMID:37676315) UniProt PMID:37676315 NCBI chr17:67,160,844...67,177,565
Ensembl chr17:72,615,831...72,633,034 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:133,670,085...133,682,228
Ensembl chr 7:146,139,837...146,151,495 		JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2161540) Ensembl
MGI		 PMID:2161540 GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G CDC7 cell division cycle 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:94,158,628...94,183,537
Ensembl chr 1:92,902,631...92,927,203 		JBrowse link
G DBF4 DBF4-CDC7 kinase regulatory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:79,872,955...79,904,778
Ensembl chr 7:93,521,856...93,552,920 		JBrowse link
G DBF4B DBF4B-CDC7 kinase regulatory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:12,571,265...12,616,105
Ensembl chr17:12,744,297...12,790,089 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G WIZ WIZ zinc finger involved_in ISO (PMID:23545495) UniProt PMID:23545495 NCBI chr19:14,952,948...14,981,300
Ensembl chr19:15,940,642...15,965,859 		JBrowse link
regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SENP2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (PMID:19090619) MGI PMID:19090619 NCBI chr 3:182,606,922...182,655,518
Ensembl chr 3:191,086,488...191,129,572 		JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:58,894,939...58,923,176
Ensembl chr10:61,223,925...61,329,657 		JBrowse link
regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:69,516,728...69,522,419
Ensembl chr16:89,174,071...89,177,823 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,612,864...24,624,010
Ensembl chr 6:24,944,377...24,955,575 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,875,921...43,916,352
Ensembl chr17:48,605,488...48,645,784 		JBrowse link
G MCIDAS multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:58,802,664...58,811,075
Ensembl chr 5:60,425,341...60,433,035 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:68,270,029...68,322,201
Ensembl chr15:87,476,738...87,528,870 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:2,587,170...2,608,179
Ensembl chr 6:2,691,235...2,711,062 		JBrowse link
regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL4 methyltransferase 4, N6-adenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,711,502...11,745,222
Ensembl chr18:14,018,279...14,051,974 		JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15980864) Ensembl
MGI		 PMID:15980864 GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917 		JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11850834) Ensembl
MGI		 PMID:11850834 GO_REF:0000107 NCBI chr16:69,516,728...69,522,419
Ensembl chr16:89,174,071...89,177,823 		JBrowse link
G DACH1 dachshund family transcription factor 1 involved_in ISO (PMID:16980615) CACAO PMID:16980615 NCBI chr13:52,666,569...53,098,257 JBrowse link
G ILKAP ILK associated serine/threonine phosphatase ISO RGD PMID:9857069 RGD:632254 NCBI chr2B:125,403,220...125,436,614
Ensembl chr2B:244,253,970...244,278,317 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:27,299,051...27,351,350
Ensembl chr 8:24,500,131...24,551,201 		JBrowse link
replication fork arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLFN11 schlafen family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,412,361...21,436,650
Ensembl chr17:21,715,569...21,727,019 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717 		JBrowse link
replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASF1A anti-silencing function 1A histone chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:116,702,314...116,717,445
Ensembl chr 6:120,843,461...120,858,471 		JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (PMID:29125140) UniProt PMID:29125140 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,986,005...8,045,002
Ensembl chr 4:13,294,884...13,345,519 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14681210) Ensembl
MGI		 PMID:14681210 GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,905,468...98,909,923
Ensembl chr 9:127,580,862...127,584,935 		JBrowse link
G CENPS centromere protein S involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:9,190,303...9,211,812 JBrowse link
G CENPX centromere protein X involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:76,423,317...76,427,577
Ensembl chr17:82,128,636...82,132,831 		JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) UniProt PMID:26503245 NCBI chr12:55,176,165...55,207,123 JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:19,944,692...19,956,140
Ensembl chr21:33,317,841...33,328,132 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:44,467,537...44,475,883
Ensembl chr17:49,341,791...49,349,959 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:395,571...403,233
Ensembl chr16:1,825,622...1,829,557 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:67,455,668...67,470,509
Ensembl chr2A:68,578,554...68,591,534 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,783,072...49,835,645
Ensembl chr14:68,656,669...68,707,834 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,359,711...54,372,132
Ensembl chr11:57,818,413...57,823,046 		JBrowse link
G FANCM FA complementation group M involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:25,752,295...25,817,001
Ensembl chr14:44,080,146...44,143,958 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:17,735,953...17,766,018
Ensembl chr2A:17,862,070...17,892,048 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (PMID:29125140) UniProt PMID:29125140 NCBI chr 6:71,089,817...71,190,700
Ensembl chr 6:74,478,303...74,479,826 		JBrowse link
G LOC100986203 histone-lysine N-methyltransferase SETMAR involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:4,256,539...4,271,593
Ensembl chr 3:4,357,890...4,371,791 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:94,989,906...95,127,260
Ensembl chr 6:98,861,299...99,011,773 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984 		JBrowse link
G OOEP oocyte expressed protein involved_in ISO (PMID:29125140) UniProt PMID:29125140 NCBI chr 6:71,195,619...71,197,040
Ensembl chr 6:74,484,764...74,511,331 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in ISO (PMID:24115439) BHF-UCL PMID:24115439 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:176,815,122...176,860,682 JBrowse link
G RAD51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22778135) Ensembl
MGI		 PMID:22778135 GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RECQL RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:64,796,383...64,829,165
Ensembl chr12:67,400,315...67,432,724 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:24115439) BHF-UCL PMID:24115439 Ensembl chr20:61,581,331...61,618,718 JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258 		JBrowse link
G TIMELESS timeless circadian regulator involved_in ISO (PMID:26503245) UniProt PMID:26503245 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:141,195,959...141,211,849
Ensembl chr 8:144,185,674...144,201,040 		JBrowse link
G TRAIP TRAF interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:49,760,528...49,789,637
Ensembl chr 3:50,996,647...51,025,241 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:24,331,731...24,665,652
Ensembl chr2B:139,234,909...139,577,193 		JBrowse link
replication fork reversal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARM1 coactivator associated arginine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,424,993...10,476,702
Ensembl chr19:11,144,733...11,195,948 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:24,331,731...24,665,652
Ensembl chr2B:139,234,909...139,577,193 		JBrowse link
telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        macromolecule metabolic process 11024
          nucleic acid metabolic process 6740
            DNA metabolic process 904
              DNA replication 265
                DNA-templated DNA replication 152
                  DNA replication initiation + 32
                  DNA replication termination + 1
                  DNA replication, synthesis of primer 7
                  DNA strand elongation involved in DNA replication + 13
                  DNA-templated DNA replication maintenance of fidelity + 55
                  cell cycle DNA replication + 42
                  mitochondrial DNA replication + 18
                  negative regulation of DNA-templated DNA replication + 9
                  plastid DNA replication 0
                  positive regulation of DNA-templated DNA replication + 16
                  pre-replicative complex assembly + 0
                  regulation of DNA-templated DNA replication + 35
                  replication of extrachromosomal circular DNA 0
                  rolling circle DNA replication 0
                  theta DNA replication 0
Path 2
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        primary metabolic process 11364
          nucleobase-containing compound metabolic process 7261
            nucleic acid metabolic process 6740
              DNA metabolic process 904
                DNA replication 265
                  DNA-templated DNA replication 152
                    DNA replication initiation + 32
                    DNA replication termination + 1
                    DNA replication, synthesis of primer 7
                    DNA strand elongation involved in DNA replication + 13
                    DNA-templated DNA replication maintenance of fidelity + 55
                    cell cycle DNA replication + 42
                    mitochondrial DNA replication + 18
                    negative regulation of DNA-templated DNA replication + 9
                    plastid DNA replication 0
                    positive regulation of DNA-templated DNA replication + 16
                    pre-replicative complex assembly + 0
                    regulation of DNA-templated DNA replication + 35
                    replication of extrachromosomal circular DNA 0
                    rolling circle DNA replication 0
                    theta DNA replication 0
paths to the root