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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA metabolic process
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Accession:GO:0006259 term browser browse the term
Definition:Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
Synonyms:exact_synonym: DNA metabolism;   cellular DNA metabolism
 alt_id: GO:0055132


show annotations for term's descendants           Sort by:
DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:42,587,173...43,111,739
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IEA InterPro GO_REF:0000002 NCBI chr20:49,299,236...49,301,815
Ensembl chr20:49,299,406...49,301,814 		JBrowse link
G DNASE2B deoxyribonuclease 2 beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:63,465,477...63,481,893
Ensembl chr 6:63,466,106...63,481,723 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8464703) UniProt
MGI
Ensembl		 PMID:8464703 GO_REF:0000104 GO_REF:0000107 NCBI chr28:9,729,812...9,759,019
Ensembl chr28:9,729,814...9,759,008 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in IEA UniProt GO_REF:0000117 NCBI chr22:52,339,011...52,372,618 JBrowse link
G EXO5 exonuclease 5 involved_in IEA GOC GO_REF:0000108 NCBI chr15:2,497,292...2,502,776 JBrowse link
G GCNA germ cell nuclear acidic peptidase involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:55,859,750...55,881,164
Ensembl chr  X:55,860,661...55,880,678 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA GOC GO_REF:0000108 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G HMGB2 high mobility group box 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606 		JBrowse link
G HMGB3 high mobility group box 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:119,152,166...119,159,803
Ensembl chr  X:119,155,786...119,159,814 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase involved_in IEA UniProt GO_REF:0000117 NCBI chr28:38,204,611...38,427,482
Ensembl chr28:38,204,610...38,427,380 		JBrowse link
G MKI67 marker of proliferation Ki-67 ISO RGD PMID:9303485 RGD:2317713 NCBI chr28:36,920,679...36,939,336
Ensembl chr28:36,913,023...36,939,486 		JBrowse link
G N4BP2 NEDD4 binding protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:72,323,016...72,439,593
Ensembl chr 3:72,277,190...72,439,615 		JBrowse link
G NLE1 notchless homolog 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:38,222,083...38,230,819
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G NYNRIN NYN domain and retroviral integrase containing involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:4,368,702...4,389,565
Ensembl chr 8:4,368,560...4,387,842 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:12707040)
(PMID:11756244)		 MGI PMID:11756244 PMID:12707040 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PLD3 phospholipase D family member 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:113,305,146...113,322,705
Ensembl chr 1:113,305,445...113,312,632 		JBrowse link
G POLB DNA polymerase beta involved_in IEA UniProt GO_REF:0000117 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA UniProt GO_REF:0000117
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLI DNA polymerase iota involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:21,162,657...21,188,328
Ensembl chr 1:21,163,140...21,187,947 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:30,793,893...30,860,240
Ensembl chr 3:30,712,571...30,859,106 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA UniProt GO_REF:0000117 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G POLM DNA polymerase mu involved_in IEA UniProt GO_REF:0000104
G RAD51D RAD51 paralog D involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA UniProt GO_REF:0000117 NCBI chr10:43,150,885...43,247,324
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr12:67,776,285...67,953,337
Ensembl chr12:67,756,924...67,953,553 		JBrowse link
G REXO2 RNA exonuclease 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:18,919,283...18,929,899
Ensembl chr 5:18,919,286...18,930,378 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G TATDN1 TatD DNase domain containing 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:22,561,003...22,624,891
Ensembl chr13:22,573,150...22,624,987 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in IEA Ensembl
GOC		 GO_REF:0000107 GO_REF:0000108 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906 		JBrowse link
G TREX2 three prime repair exonuclease 2 involved_in IEA GOC GO_REF:0000108 NCBI chr  X:121,263,341...121,265,009
Ensembl chr  X:121,258,646...121,264,555 		JBrowse link
G WRN WRN RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11756244), (PMID:12707040) Ensembl
MGI		 PMID:11756244 PMID:12707040 GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:85,364,819...85,372,473
Ensembl chr 2:85,364,851...85,373,772 		JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:15572351) RGD
TreeGrafter
Ensembl
InterPro
MGI		 PMID:11425895 PMID:15572351 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:628524 NCBI chr 5:58,340,183...58,355,353
Ensembl chr 5:58,339,634...58,354,326 		JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G DNASE1L3 deoxyribonuclease 1L3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12050166) Ensembl
MGI
TreeGrafter		 PMID:12050166 GO_REF:0000107 GO_REF:0000118 NCBI chr20:32,350,138...32,379,240
Ensembl chr20:32,358,110...32,379,245 		JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr20:49,299,236...49,301,815
Ensembl chr20:49,299,406...49,301,814 		JBrowse link
G DNASE2B deoxyribonuclease 2 beta involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:63,465,477...63,481,893
Ensembl chr 6:63,466,106...63,481,723 		JBrowse link
G ENDOG endonuclease G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14663139) Ensembl
MGI
TreeGrafter		 PMID:14663139 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042 		JBrowse link
G EXOG exo/endonuclease G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:8,231,469...8,260,572
Ensembl chr23:8,231,484...8,258,710 		JBrowse link
G FOXL2 forkhead box L2 involved_in ISO (PMID:16153597) UniProt PMID:16153597 NCBI chr23:35,145,856...35,147,185 JBrowse link
G LOC100686111 nuclease EXOG, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:104,857,047...104,858,004 JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,598,373...63,676,753
Ensembl chr10:63,599,229...63,676,747 		JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:46,692,667...46,703,309
Ensembl chr  X:46,693,191...46,702,195 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr18:54,680,627...54,686,502
Ensembl chr18:54,681,760...54,682,902 		JBrowse link
G HMGA1 high mobility group AT-hook 1 involved_in ISO (PMID:19465398) UniProt PMID:19465398 NCBI chr12:3,528,818...3,538,533
Ensembl chr12:3,533,102...3,538,533 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:3722031|PMID:17803946) UniProt PMID:17803946 MGI:3722031 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:45,234,666...45,409,641
Ensembl chr  X:45,234,322...45,410,043 		JBrowse link
G LIG1 DNA ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15177041)
(PMID:9371767)		 Ensembl
MGI
TreeGrafter
InterPro		 PMID:9371767 PMID:15177041 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:40,390,053...40,396,893
Ensembl chr 6:40,390,124...40,393,810 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr15:15,018,345...15,026,539
Ensembl chr15:14,906,543...15,026,539 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr30:38,213,429...38,218,132
Ensembl chr30:38,213,250...38,218,130 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr25:26,102,652...26,117,418
Ensembl chr25:26,103,111...26,117,544 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:52,383,585...52,472,398
Ensembl chr16:52,387,389...52,436,173 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:38,899,144...38,904,637
Ensembl chr 6:38,899,126...38,905,622 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10570187)
(PMID:9207108)		 RGD
MGI
Ensembl
InterPro		 PMID:9207108 PMID:9801319 PMID:10570187 GO_REF:0000002 GO_REF:0000107 RGD:729091 NCBI chr20:8,486,150...8,491,448
Ensembl chr20:8,480,005...8,491,264 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:11948190) MGI PMID:11948190 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11948190) Ensembl
MGI		 PMID:11948190 GO_REF:0000107 NCBI chr15:17,705,966...17,716,743
Ensembl chr15:17,705,975...17,716,094 		JBrowse link
G POLB DNA polymerase beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA TreeGrafter GO_REF:0000118
G RPS3 ribosomal protein S3 involved_in ISO (PMID:15518571) GO_Central PMID:15518571 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034 		JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:3663736|PMID:16439206) CACAO PMID:16439206 MGI:3663736 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr27:1,086,675...1,093,175
Ensembl chr27:1,089,808...1,111,129 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,493,593...42,516,868
Ensembl chr15:42,493,737...42,515,448 		JBrowse link
G TESK2 testis associated actin remodelling kinase 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr15:14,871,104...15,014,896
Ensembl chr15:14,906,543...15,026,539 		JBrowse link
G UNG uracil DNA glycosylase involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:12167490 GO_REF:0000002 GO_REF:0000104 RGD:634481 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:34,917,664...35,027,969
Ensembl chr21:34,911,269...35,026,790 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G XNDC1 XRCC1 N-terminal domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro		 PMID:17412650 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2302580 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:9927729) UniProt PMID:9927729 NCBI chr22:52,339,011...52,372,618 JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:38,899,144...38,904,637
Ensembl chr 6:38,899,126...38,905,622 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:8,486,150...8,491,448
Ensembl chr20:8,480,005...8,491,264 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:42,493,593...42,516,868
Ensembl chr15:42,493,737...42,515,448 		JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UNG uracil DNA glycosylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288 		JBrowse link
base-excision repair, DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG3 DNA ligase 3 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:17412650 GO_REF:0000107 GO_REF:0000118 RGD:2302580 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15177179) Ensembl
MGI		 PMID:15177179 GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15177179) RGD
MGI
Ensembl		 PMID:15177179 PMID:17412650 GO_REF:0000107 RGD:2302580 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15177179) TreeGrafter
MGI		 PMID:15177179 GO_REF:0000118 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15177179) MGI
Ensembl		 PMID:15177179 GO_REF:0000107 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26490168) Ensembl
MGI		 PMID:26490168 GO_REF:0000107 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788 		JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5545848|PMID:24390283)
(PMID:17784788)		 UniProt
MGI		 PMID:17784788 PMID:24390283 MGI:5545848 NCBI chr15:17,673,065...17,701,701
Ensembl chr15:17,673,609...17,695,336 		JBrowse link
G LOC102152531 synaptonemal complex protein 3-like involved_in
acts_upstream_of_or_within		 ISO (MGI:2179610|PMID:12004129)
(PMID:22164254)		 UniProt
MGI		 PMID:12004129 PMID:22164254 MGI:2179610 NCBI chr  X:121,060,275...121,074,166 JBrowse link
G MSH5 mutS homolog 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:1,221,278...1,243,042 JBrowse link
G RNF212 ring finger protein 212 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,453,856...91,483,674
Ensembl chr 3:91,453,367...91,474,547 		JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22164254) Ensembl
MGI
TreeGrafter		 PMID:22164254 GO_REF:0000107 GO_REF:0000118 NCBI chr17:52,538,909...52,681,495
Ensembl chr17:52,539,615...52,648,133 		JBrowse link
G TEX11 testis expressed 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18316482) Ensembl
MGI		 PMID:18316482 GO_REF:0000107 NCBI chr  X:54,958,568...55,268,720
Ensembl chr  X:54,958,568...55,268,684 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B acts_upstream_of_or_within ISO (PMID:12556476) MGI PMID:12556476 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
DNA ADP-ribosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,705,966...17,716,743
Ensembl chr15:17,705,975...17,716,094 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
DNA alkylation repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH1 alkB homolog 1, histone H2A dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,444,994...50,471,151
Ensembl chr 8:50,445,748...50,471,135 		JBrowse link
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:17,911,892...17,918,911
Ensembl chr26:17,911,763...17,917,788 		JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr18:25,864,041...25,899,226
Ensembl chr18:25,824,877...25,899,079 		JBrowse link
G ASCC1 activating signal cointegrator 1 complex subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:22,779,644...22,876,434
Ensembl chr 4:22,779,781...22,874,215 		JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:58,590,888...58,932,677
Ensembl chr12:58,592,025...58,932,615 		JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:61,699,864...62,080,199
Ensembl chr 2:61,652,236...62,080,059 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:1554415) RGD
MGI
Ensembl		 PMID:1554415 PMID:15025514 GO_REF:0000107 RGD:2316914 NCBI chr28:38,204,611...38,427,482
Ensembl chr28:38,204,610...38,427,380 		JBrowse link
G OTUD4 OTU deubiquitinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:43,816,656...43,861,813
Ensembl chr15:43,818,196...43,861,784 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,277,328...33,315,601
Ensembl chr 6:33,277,444...33,314,491 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:25944111) UniProt PMID:25944111 NCBI chr  X:35,522,873...35,676,086 JBrowse link
DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:42,587,173...43,111,739
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G CCN2 cellular communication network factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:25,508,082...25,511,058
Ensembl chr 1:25,507,662...25,510,145 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA GOC GO_REF:0000108 NCBI chr28:9,729,812...9,759,019
Ensembl chr28:9,729,814...9,759,008 		JBrowse link
G LIG1 DNA ligase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19458888) Ensembl
MGI		 PMID:19458888 GO_REF:0000107 NCBI chr11:12,023,645...12,040,015
Ensembl chr11:12,027,250...12,039,819 		JBrowse link
G PAM16 presequence translocase associated motor 16 acts_upstream_of_or_within ISO (PMID:20719856) MGI PMID:20719856 NCBI chr 6:37,040,484...37,047,708 JBrowse link
G PHB1 prohibitin 1 acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chr 9:25,525,711...25,536,722
Ensembl chr 9:25,526,649...25,536,722 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO
IEA		 RGD
GOC		 PMID:9099618 PMID:11959615 GO_REF:0000108 RGD:7247274 RGD:7247275 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLB DNA polymerase beta involved_in IEA UniProt
GOC		 GO_REF:0000043 GO_REF:0000108 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA		 RGD
GOC
UniProt		 PMID:11959615 GO_REF:0000108 GO_REF:0000117 RGD:7247274 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in ISO
IEA		 RGD
GOC		 PMID:11959615 GO_REF:0000108 RGD:7247274 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA GOC GO_REF:0000108 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA GOC GO_REF:0000108 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G POLH DNA polymerase eta involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr12:12,034,544...12,070,305
Ensembl chr12:12,034,583...12,069,707 		JBrowse link
G POLI DNA polymerase iota involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:21,162,657...21,188,328
Ensembl chr 1:21,163,140...21,187,947 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:30,793,893...30,860,240
Ensembl chr 3:30,712,571...30,859,106 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G POLM DNA polymerase mu involved_in IEA GOC GO_REF:0000108
G POLN DNA polymerase nu involved_in IEA GOC GO_REF:0000108 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA GOC GO_REF:0000108 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA UniProt GO_REF:0000043 NCBI chr10:43,150,885...43,247,324
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23651497) Ensembl
MGI		 PMID:23651497 GO_REF:0000107 NCBI chr 5:81,089,657...81,172,173
Ensembl chr 5:81,142,888...81,172,189 		JBrowse link
G SPHK1 sphingosine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23651497) Ensembl
MGI		 PMID:23651497 GO_REF:0000107 NCBI chr 9:4,311,698...4,314,773
Ensembl chr 9:4,311,683...4,314,483 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:9227431 RGD:150521729 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077 		JBrowse link
G TERT telomerase reverse transcriptase involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:11,288,622...11,307,790
Ensembl chr34:11,288,622...11,307,951 		JBrowse link
G TK1 thymidine kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:2,959,450...2,970,908
Ensembl chr 9:2,959,488...2,971,064 		JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:1627644) UniProt PMID:1627644 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:58,340,183...58,355,353
Ensembl chr 5:58,339,634...58,354,326 		JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in IEA
IBA
ISS		 (PMID:29191910) InterPro
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:29191910 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:37,596,735...37,599,953
Ensembl chr 6:37,595,911...37,599,827 		JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:122,101,992...122,109,240
Ensembl chr  X:122,101,992...122,109,165 		JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21307874) InterPro
MGI
TreeGrafter
Ensembl		 PMID:21307874 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
G DNASE1L3 deoxyribonuclease 1L3 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:32,350,138...32,379,240
Ensembl chr20:32,358,110...32,379,245 		JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,299,236...49,301,815
Ensembl chr20:49,299,406...49,301,814 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23361013) Ensembl
MGI		 PMID:23361013 GO_REF:0000107 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:51,822,642...51,833,665
Ensembl chr 3:51,822,888...51,833,659 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23361013) InterPro
UniProt
MGI
Ensembl		 PMID:23361013 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,827,584...49,834,872
Ensembl chr 9:49,828,067...49,836,632 		JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:20521842), (PMID:21491884)
(PMID:24573677)		 UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18724932), (PMID:19923437), (PMID:23993650)
(PMID:25848017)
(PMID:20871604)		 Ensembl
MGI		 PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000107 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906 		JBrowse link
DNA cytosine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO RGD PMID:12697753 RGD:1358271 NCBI chr27:37,102,728...37,114,084
Ensembl chr27:37,103,016...37,114,556 		JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in IEA TreeGrafter GO_REF:0000118
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808 		JBrowse link
G CBX7 chromobox 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:25,876,022...25,896,284
Ensembl chr10:25,876,016...25,893,501 		JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,443,459...2,489,147
Ensembl chr22:2,436,206...2,489,016 		JBrowse link
DNA deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598 		JBrowse link
G EXOSC4 exosome component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,574,359...37,576,331
Ensembl chr13:37,574,527...37,577,380 		JBrowse link
G EXOSC5 exosome component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,599,519...112,609,039
Ensembl chr 1:112,599,568...112,608,941 		JBrowse link
G EXOSC6 exosome component 6 involved_in ISO (PMID:21255825) UniProt PMID:21255825 NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976 		JBrowse link
DNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:37,102,728...37,114,084
Ensembl chr27:37,103,016...37,114,556 		JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:9,808,276...9,819,973
Ensembl chr12:9,808,297...9,819,985 		JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in IEA TreeGrafter GO_REF:0000118
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808 		JBrowse link
G CBX7 chromobox 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:25,876,022...25,896,284
Ensembl chr10:25,876,016...25,893,501 		JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107
G TET1 tet methylcytosine dioxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24291790)
(PMID:21295276)
(PMID:20639862)		 InterPro
MGI
TreeGrafter
Ensembl
UniProt		 PMID:20639862 PMID:21295276 PMID:24291790 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:19,759,661...19,898,345
Ensembl chr 4:19,768,137...19,889,907 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20639862) InterPro
MGI
TreeGrafter
UniProt		 PMID:20639862 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr32:26,021,745...26,145,109
Ensembl chr32:26,059,693...26,143,536 		JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20639862) InterPro
MGI
TreeGrafter
Ensembl
UniProt		 PMID:20639862 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr17:48,976,510...49,083,454
Ensembl chr17:48,981,558...49,082,675 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:10802669), (PMID:26240375) UniProt PMID:10802669 PMID:26240375 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,028,537...43,082,038
Ensembl chr 8:43,042,563...43,187,969 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254 		JBrowse link
G LOC119868036 ubiquitin-conjugating enzyme E2 variant 2 involved_in IEA Ensembl GO_REF:0000107
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:21491884) UniProt PMID:21491884 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:17,089,514...17,167,917
Ensembl chr32:17,090,293...17,166,648 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELQ helicase, POLQ like involved_in ISO (PMID:34937945) UniProt PMID:34937945 NCBI chr32:7,245,867...7,290,138
Ensembl chr32:7,245,230...7,290,014 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19506022) MGI
Ensembl		 PMID:19506022 GO_REF:0000107 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:65,218,288...65,319,696
Ensembl chr 7:65,218,297...65,297,099 		JBrowse link
G RBBP8NL RBBP8 N-terminal like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:46,377,956...46,393,990
Ensembl chr24:46,377,956...46,387,543 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:57,521,416...57,554,793
Ensembl chr 7:57,523,595...57,556,005 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) UniProt PMID:19595721 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZPR1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:16,778,803...16,787,493
Ensembl chr 5:16,778,832...16,787,105 		JBrowse link
DNA integration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BANF1 BAF nuclear assembly factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9465049) Ensembl
MGI		 PMID:9465049 GO_REF:0000107 NCBI chr18:51,269,817...51,271,484
Ensembl chr18:51,269,815...51,271,690 		JBrowse link
G GIN1 gypsy retrotransposon integrase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:8,088,719...8,116,461
Ensembl chr 3:8,088,515...8,116,436 		JBrowse link
G KRBA2 KRAB-A domain containing 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:33,144,223...33,151,175
Ensembl chr 5:33,147,045...33,150,779 		JBrowse link
G NYNRIN NYN domain and retroviral integrase containing involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:4,368,702...4,389,565
Ensembl chr 8:4,368,560...4,387,842 		JBrowse link
G SCAND3 SCAN domain containing 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr35:25,691,881...25,720,415
Ensembl chr35:25,694,078...25,720,226 		JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:16332963), (PMID:24573677) UniProt PMID:16332963 PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G THAP9 THAP domain containing 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:6,852,057...6,875,660
Ensembl chr32:6,852,116...6,870,696 		JBrowse link
DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APTX aprataxin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16964241) Ensembl
MGI		 PMID:16964241 GO_REF:0000107 NCBI chr11:50,111,003...50,155,937
Ensembl chr11:50,113,073...50,132,284 		JBrowse link
G LIG1 DNA ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in ISO (PMID:7565692) BHF-UCL PMID:7565692 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15968270)
(PMID:15194694)		 RGD
MGI
Ensembl		 PMID:9600082 PMID:15194694 PMID:15968270 GO_REF:0000107 RGD:1601271 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:15194694) MGI PMID:15194694 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
DNA ligation involved in DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9823897) Ensembl
MGI		 PMID:9823897 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
DNA ligation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9823897) InterPro
MGI
Ensembl		 PMID:9823897 GO_REF:0000002 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
DNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 ISO positive regulation of DNA adduct formation RGD PMID:24025706 RGD:7829724 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA UniProt GO_REF:0000043 NCBI chr28:9,729,812...9,759,019
Ensembl chr28:9,729,814...9,759,008 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24205360) Ensembl
MGI		 PMID:24205360 GO_REF:0000107 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906 		JBrowse link
DNA protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G DCTPP1 dCTP pyrophosphatase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor ISO RGD PMID:31644904 RGD:126925983 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G NUDT1 nudix hydrolase 1 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:14,874,459...14,881,517
Ensembl chr 6:14,859,518...14,882,704 		JBrowse link
G NUDT15 nudix hydrolase 15 NOT|involved_in ISO
IEA		 (PMID:26238318) UniProt
Ensembl		 PMID:26238318 GO_REF:0000107 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMC1 DNA meiotic recombinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G RAD51 RAD51 recombinase involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR8 actin related protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:46,692,667...46,703,309
Ensembl chr  X:46,693,191...46,702,195 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in ISO
IEA		 RGD
UniProt		 PMID:12228710 GO_REF:0000043 GO_REF:0000117 RGD:632363 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12504013) Ensembl
MGI
UniProt		 PMID:12504013 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:26,342,419...26,350,561
Ensembl chr 9:26,344,438...26,349,997 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11707424) UniProt
MGI
Ensembl		 PMID:11707424 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:55,204,861...55,224,543
Ensembl chr20:55,204,868...55,224,528 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G IHO1 interactor of HORMAD1 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:39,964,629...40,006,726
Ensembl chr20:39,965,480...39,990,756 		JBrowse link
G LIG1 DNA ligase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G LOC102153224 non-structural maintenance of chromosomes element 4 homolog A-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr30:39,867,573...39,869,956 JBrowse link
G LOC119880046 RAD52 motif-containing protein 1-like involved_in IEA UniProt GO_REF:0000117
G LOC483061 DNA excision repair protein ERCC-1-like involved_in IEA UniProt GO_REF:0000117 NCBI chr17:36,535,679...36,536,408 JBrowse link
G MEI4 meiotic double-stranded break formation protein 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:38,818,983...39,024,784
Ensembl chr12:38,818,705...39,023,864 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:19,330,815...19,363,240
Ensembl chr 6:19,330,843...19,363,239 		JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr28:31,710,690...31,723,301
Ensembl chr28:31,712,719...31,718,546
Ensembl chr28:31,712,719...31,718,546 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr30:29,223,507...29,232,584
Ensembl chr30:29,157,119...29,232,043 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA UniProt GO_REF:0000043 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 acts_upstream_of_or_within ISO (PMID:9192668) MGI PMID:9192668 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
G RAG1 recombination activating 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:31,628,231...31,639,980
Ensembl chr18:31,630,737...31,641,660 		JBrowse link
G RAG2 recombination activating 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr18:31,614,143...31,621,489
Ensembl chr18:31,618,481...31,620,064 		JBrowse link
G RECQL RecQ like helicase involved_in IEA InterPro GO_REF:0000002 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G RPA1 replication protein A1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA InterPro GO_REF:0000002
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr24:47,219,977...47,248,791 JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:87,192,988...87,285,678
Ensembl chr 1:87,194,867...87,285,606 		JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,313,902...20,342,375
Ensembl chr 4:20,313,814...20,340,882 		JBrowse link
G THAP9 THAP domain containing 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:6,852,057...6,875,660
Ensembl chr32:6,852,116...6,870,696 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA InterPro GO_REF:0000002 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr32:7,298,789...7,316,665
Ensembl chr32:7,298,790...7,317,001 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G ADPRS ADP-ribosylserine hydrolase involved_in ISO (PMID:30045870) UniProt PMID:30045870 NCBI chr15:6,116,516...6,122,330
Ensembl chr15:6,116,500...6,123,798 		JBrowse link
G AFF3 ALF transcription elongation factor 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:42,587,173...43,111,739
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G ALKBH1 alkB homolog 1, histone H2A dioxygenase involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 8:50,444,994...50,471,151
Ensembl chr 8:50,445,748...50,471,135 		JBrowse link
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr26:17,911,892...17,918,911
Ensembl chr26:17,911,763...17,917,788 		JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) UniProt PMID:27010503 MGI:5800654 NCBI chr20:45,461,135...45,465,922
Ensembl chr20:45,461,676...45,465,417 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:46,692,667...46,703,309
Ensembl chr  X:46,693,191...46,702,195 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761 		JBrowse link
G APTX aprataxin involved_in IEA UniProt GO_REF:0000043 NCBI chr11:50,111,003...50,155,937
Ensembl chr11:50,113,073...50,132,284 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11897662) MGI
Ensembl		 PMID:11897662 GO_REF:0000107 NCBI chr 1:58,821,324...58,834,935
Ensembl chr 1:58,821,521...58,946,475 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11679583)
(PMID:15542845)
(PMID:15364958)		 Ensembl
MGI
InterPro		 PMID:11679583 PMID:15364958 PMID:15542845 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) UniProt
MGI		 PMID:15364958 GO_REF:0000043 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G ATRIP ATR interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:40,626,828...40,642,689
Ensembl chr20:40,626,831...40,642,594 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:21,886,127...22,288,513
Ensembl chr17:21,889,862...22,288,504 		JBrowse link
G BACH1 BTB domain and CNC homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:24,269,310...24,310,369
Ensembl chr31:24,269,280...24,381,454 		JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr28:34,983,827...34,999,180
Ensembl chr28:34,983,858...34,999,118 		JBrowse link
G BLM BLM RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) InterPro
MGI		 PMID:15364958 GO_REF:0000002 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA UniProt GO_REF:0000043 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:123,081,262...123,143,509
Ensembl chr  X:123,081,050...123,140,133 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788 		JBrowse link
G CDK2 cyclin dependent kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:300,863...306,546
Ensembl chr10:300,903...305,438 		JBrowse link
G CENPX centromere protein X involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043
G CHAF1A chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chr20:55,248,286...55,276,425
Ensembl chr20:55,248,288...55,276,900 		JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:57,725,823...57,806,065
Ensembl chr17:57,725,640...57,806,048 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) Ensembl
MGI		 PMID:15364958 GO_REF:0000107 NCBI chr 5:8,878,511...8,910,626
Ensembl chr 5:8,879,147...8,907,669 		JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:47,024,948...47,036,507
Ensembl chr24:47,025,187...47,042,266 		JBrowse link
G CMTR1 cap methyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:6,454,605...6,505,127
Ensembl chr12:6,454,652...6,504,776 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr28:24,704,044...24,724,561
Ensembl chr28:24,669,733...24,723,841 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chr18:42,354,201...42,378,463
Ensembl chr18:42,354,572...42,377,947 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:16,077,164...16,085,666
Ensembl chr15:16,077,206...16,085,687 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr28:9,729,812...9,759,019
Ensembl chr28:9,729,814...9,759,008 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr20:56,805,030...56,868,771
Ensembl chr20:56,803,242...56,852,539 		JBrowse link
G EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:47,604,548...47,721,301
Ensembl chr14:47,612,004...47,720,906 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:26,342,419...26,350,561
Ensembl chr 9:26,344,438...26,349,997 		JBrowse link
G ENDOV endonuclease V involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:1,418,666...1,436,726
Ensembl chr 9:1,407,398...1,437,177 		JBrowse link
G EP400 E1A binding protein p400 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:848,028...951,135
Ensembl chr26:848,016...951,171 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25538220)
(PMID:12466203)		 MGI
Ensembl
UniProt
InterPro		 PMID:12466203 PMID:25538220 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11950998) Ensembl
MGI		 PMID:11950998 GO_REF:0000107 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,310,911...23,344,083
Ensembl chr19:23,310,986...23,337,683 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14729965) InterPro
MGI
UniProt
Ensembl		 PMID:14729965 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15082767) UniProt
MGI		 PMID:15082767 GO_REF:0000043 NCBI chr22:52,339,011...52,372,618 JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10806208)
(PMID:12447686), (PMID:17213818)		 Ensembl
MGI		 PMID:10806208 PMID:12447686 PMID:17213818 GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254 		JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:119,119,920...119,124,964
Ensembl chr 1:119,120,463...119,124,038 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:38,013,744...38,053,096
Ensembl chr 3:38,013,739...38,052,202 		JBrowse link
G FANCC FA complementation group C involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:71,388,931...71,678,019
Ensembl chr 1:71,487,601...71,678,506 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:8,240,270...8,297,269
Ensembl chr20:8,240,311...8,297,568 		JBrowse link
G FANCI FA complementation group I involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:52,282,955...52,357,874
Ensembl chr 3:52,282,731...52,357,226 		JBrowse link
G FANCL FA complementation group L involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:58,521,480...58,637,352
Ensembl chr10:58,521,552...58,637,482 		JBrowse link
G FANCM FA complementation group M involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12861020) UniProt
MGI		 PMID:12861020 GO_REF:0000043 NCBI chr18:54,680,627...54,686,502
Ensembl chr18:54,681,760...54,682,902 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:40,770,661...40,807,329
Ensembl chr21:40,770,983...40,806,556 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr26:5,985,094...6,011,253
Ensembl chr26:5,985,798...6,011,163 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:675,960...681,504
Ensembl chr12:675,983...681,425 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA UniProt GO_REF:0000043
G GTF2H5 general transcription factor IIH subunit 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:47,669,196...47,681,370
Ensembl chr 1:47,669,248...47,681,368 		JBrowse link
G H2AX H2A.X variant histone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958)
(PMID:11934988)		 Ensembl
MGI		 PMID:11934988 PMID:15364958 GO_REF:0000107 NCBI chr 5:14,765,625...14,766,590
Ensembl chr 5:14,766,126...14,766,557 		JBrowse link
G HDAC9 histone deacetylase 9 acts_upstream_of_or_within ISO (PMID:21746928) MGI PMID:21746928 NCBI chr14:32,469,349...33,310,439
Ensembl chr14:32,588,414...33,304,387 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:55,204,861...55,224,543
Ensembl chr20:55,204,868...55,224,528 		JBrowse link
G HINFP histone H4 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,731,592...14,742,893
Ensembl chr 5:14,731,588...14,742,559 		JBrowse link
G HLTF helicase like transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:43,868,896...43,918,616
Ensembl chr23:43,870,939...43,918,436 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G HPF1 histone PARylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:20,622,781...20,645,459
Ensembl chr25:20,622,774...20,644,822 		JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:45,234,666...45,409,641
Ensembl chr  X:45,234,322...45,410,043 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr11:67,137,101...67,154,443
Ensembl chr11:67,137,710...67,154,486 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,325,522...43,361,669
Ensembl chr 7:43,326,315...43,361,362 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,655,783...49,691,899
Ensembl chr18:49,637,610...49,827,034 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,334,687...102,342,090
Ensembl chr 1:102,333,543...102,342,118 		JBrowse link
G LIG1 DNA ligase 1 NOT|acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11896201)
(PMID:21390131)		 RGD
MGI
UniProt
InterPro		 PMID:1730240 PMID:11896201 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 RGD:724410 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21390131)
(PMID:11779495)		 Ensembl
MGI
UniProt
InterPro		 PMID:11779495 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G LOC100688306 BRCA2 and CDKN1A-interacting protein-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:74,185,155...74,186,324 JBrowse link
G LOC100856010 ubiquitin-conjugating enzyme E2 B-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:381,981...382,463 JBrowse link
G LOC102153224 non-structural maintenance of chromosomes element 4 homolog A-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr30:39,867,573...39,869,956 JBrowse link
G LOC119872575 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107
G LOC478089 general transcription factor IIH subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:54,553,871...54,579,695
Ensembl chr 2:54,554,578...54,628,670 		JBrowse link
G LOC483061 DNA excision repair protein ERCC-1-like involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:36,535,679...36,536,408 JBrowse link
G LOC610150 lys-63-specific deubiquitinase BRCC36-like involved_in IEA InterPro GO_REF:0000002 NCBI chr32:24,754,628...24,755,868 JBrowse link
G MACROH2A1 macroH2A.1 histone involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,369,957...23,448,235
Ensembl chr11:23,370,300...23,438,219 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr20:5,716,162...5,725,068
Ensembl chr20:5,716,239...5,724,881 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr24:5,068,147...5,083,941 JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:13679151) InterPro
MGI
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:13679151 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr28:38,204,611...38,427,482
Ensembl chr28:38,204,610...38,427,380 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:13679151)
(PMID:15480418)		 Ensembl
MGI
UniProt		 PMID:13679151 PMID:15480418 GO_REF:0000043 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr28:10,749,327...10,783,846
Ensembl chr28:10,749,325...10,783,805 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr12:55,584,884...55,713,996
Ensembl chr12:55,588,888...55,713,341 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:35,747,883...35,946,353
Ensembl chr 8:35,756,933...35,946,353 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:40,390,053...40,396,893
Ensembl chr 6:40,390,124...40,393,810 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12687013) Ensembl
MGI
UniProt		 PMID:12687013 GO_REF:0000043 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G MSH5 mutS homolog 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:1,221,278...1,243,042 JBrowse link
G MSH6 mutS homolog 6 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:15,018,345...15,026,539
Ensembl chr15:14,906,543...15,026,539 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:2,157,357...2,163,812
Ensembl chr37:2,157,356...2,161,091 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:546,964...551,360
Ensembl chr10:546,964...551,107 		JBrowse link
G NBN nibrin involved_in IEA UniProt GO_REF:0000043 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12200441) UniProt
MGI		 PMID:12200441 GO_REF:0000043 GO_REF:0000117 NCBI chr30:38,213,429...38,218,132
Ensembl chr30:38,213,250...38,218,130 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr25:26,102,652...26,117,418
Ensembl chr25:26,103,111...26,117,544 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:52,383,585...52,472,398
Ensembl chr16:52,387,389...52,436,173 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372 		JBrowse link
G NLE1 notchless homolog 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:38,222,083...38,230,819
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO (PMID:26945015) UniProt PMID:26945015 NCBI chr 6:39,131,807...39,132,756 JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,307,039...108,315,732
Ensembl chr 1:108,307,042...108,316,495 		JBrowse link
G NPM1 nucleophosmin 1 involved_in ISO (PMID:19188445) UniProt PMID:19188445 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 6:19,330,815...19,363,240
Ensembl chr 6:19,330,843...19,363,239 		JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr28:31,710,690...31,723,301
Ensembl chr28:31,712,719...31,718,546
Ensembl chr28:31,712,719...31,718,546 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 6:38,899,144...38,904,637
Ensembl chr 6:38,899,126...38,905,622 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12447686), (PMID:17213818)
(PMID:11532868), (PMID:12447686), (PMID:17213818)
(PMID:12874039)		 Ensembl
MGI
UniProt		 PMID:11532868 PMID:12447686 PMID:12874039 PMID:17213818 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr20:8,486,150...8,491,448
Ensembl chr20:8,480,005...8,491,264 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in ISO (PMID:28596309) UniProt PMID:28596309 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr15:17,705,966...17,716,743
Ensembl chr15:17,705,975...17,716,094 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA UniProt GO_REF:0000043 NCBI chr30:28,832,388...28,846,824 JBrowse link
G PDS5A PDS5 cohesin associated factor A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:72,521,839...72,673,164
Ensembl chr 3:72,521,868...72,673,164 		JBrowse link
G PDS5B PDS5 cohesin associated factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:7,407,533...7,587,177
Ensembl chr25:7,410,481...7,586,563 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:85,379,378...85,389,175 JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr30:29,223,507...29,232,584
Ensembl chr30:29,157,119...29,232,043 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15480418) Ensembl
MGI		 PMID:15480418 GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:3335506)
(PMID:11470886)		 UniProt PMID:3335506 PMID:11470886 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLB DNA polymerase beta involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLH DNA polymerase eta involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:12,034,544...12,070,305
Ensembl chr12:12,034,583...12,069,707 		JBrowse link
G POLI DNA polymerase iota involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:21,162,657...21,188,328
Ensembl chr 1:21,163,140...21,187,947 		JBrowse link
G POLK DNA polymerase kappa involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12555660) Ensembl
MGI
UniProt
InterPro		 PMID:12555660 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:30,793,893...30,860,240
Ensembl chr 3:30,712,571...30,859,106 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G POLM DNA polymerase mu involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043
G POLN DNA polymerase nu involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G POLQ DNA polymerase theta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542845)
(PMID:12663541), (PMID:15542845)		 UniProt
MGI
Ensembl		 PMID:12663541 PMID:15542845 GO_REF:0000107 GO_REF:0000117 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G PSME4 proteasome activator subunit 4 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr10:54,873,093...54,960,030
Ensembl chr10:54,875,177...54,960,035 		JBrowse link
G PWWP3A PWWP domain containing 3A, DNA repair factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:57,452,289...57,469,207
Ensembl chr20:57,452,300...57,468,692 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:73,372,391...73,393,148
Ensembl chr 4:73,385,566...73,452,033 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 2:54,407,184...54,437,676
Ensembl chr 2:54,407,228...54,437,632 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase involved_in IEA UniProt GO_REF:0000043 NCBI chr20:9,163,322...9,271,224
Ensembl chr20:9,163,428...9,263,730 		JBrowse link
G RAD21 RAD21 cohesin complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr13:16,337,563...16,368,041
Ensembl chr13:16,338,972...16,368,035 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr20:49,244,330...49,250,058
Ensembl chr20:49,241,358...49,250,039 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr11:62,732,989...62,778,957
Ensembl chr11:62,732,984...62,775,978 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr18:50,065,154...50,070,582
Ensembl chr18:50,065,685...50,070,710 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr26:8,309,384...8,333,414
Ensembl chr26:8,309,592...8,343,424 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:65,218,288...65,319,696
Ensembl chr 7:65,218,297...65,297,099 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA UniProt GO_REF:0000043 NCBI chr10:43,150,885...43,247,324
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884603) Ensembl
MGI
UniProt		 PMID:11884603 GO_REF:0000043 GO_REF:0000107 NCBI chr12:67,776,285...67,953,337
Ensembl chr12:67,756,924...67,953,553 		JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,827,584...49,834,872
Ensembl chr 9:49,828,067...49,836,632 		JBrowse link
G RFC1 replication factor C subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:73,062,292...73,136,576
Ensembl chr 3:73,062,329...73,135,096 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:6,119,203...6,159,293
Ensembl chr 6:6,119,164...6,160,886 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:6,469,865...6,486,935
Ensembl chr25:6,469,867...6,486,849 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr34:19,361,024...19,377,289
Ensembl chr34:19,361,044...19,377,294 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:14,428,661...14,439,641
Ensembl chr26:14,428,695...14,438,986 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,440,493...31,445,318
Ensembl chr 6:31,441,517...31,445,310 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:57,521,416...57,554,793
Ensembl chr 7:57,523,595...57,556,005 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA UniProt GO_REF:0000043 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G RPA1 replication protein A1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA InterPro GO_REF:0000002
G RPS3 ribosomal protein S3 involved_in IEA UniProt GO_REF:0000043 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12858174) Ensembl
MGI		 PMID:12858174 GO_REF:0000107 NCBI chr13:3,774,725...3,838,576
Ensembl chr13:3,799,025...3,837,934 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr24:47,219,977...47,248,791 JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr28:16,436,261...16,440,219
Ensembl chr28:16,436,377...16,439,742 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:23911928) UniProt PMID:23911928 NCBI chr15:42,731,147...42,771,577
Ensembl chr15:42,731,426...42,770,624 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr32:17,089,514...17,167,917
Ensembl chr32:17,090,293...17,166,648 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr37:23,364,941...23,425,206
Ensembl chr37:23,367,220...23,419,248 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ISO RGD PMID:12718542 RGD:2317001 NCBI chr27:1,086,675...1,093,175
Ensembl chr27:1,089,808...1,111,129 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:8,120,151...8,133,402
Ensembl chr 4:8,120,351...8,133,191 		JBrowse link
G SSRP1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:38,802,673...38,812,134
Ensembl chr18:38,802,619...38,812,131 		JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:18,387,624...18,429,553
Ensembl chr15:18,388,512...18,429,553 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:55,229,510...55,234,645
Ensembl chr 9:55,229,550...55,234,489 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:42,493,593...42,516,868
Ensembl chr15:42,493,737...42,515,448 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21390131) Ensembl
MGI
TreeGrafter
InterPro
UniProt		 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:61,023,564...61,107,599
Ensembl chr 8:61,024,084...61,107,506 		JBrowse link
G TESK2 testis associated actin remodelling kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:14,871,104...15,014,896
Ensembl chr15:14,906,543...15,026,539 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr13:37,846,010...37,857,633
Ensembl chr13:37,846,149...37,857,668 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) Ensembl
MGI		 PMID:15364958 GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA UniProt GO_REF:0000043 NCBI chr25:42,060,103...42,208,326
Ensembl chr25:42,060,991...42,208,054 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:10,519,734...10,635,175
Ensembl chr 6:10,519,711...10,632,776 		JBrowse link
G TTF2 transcription termination factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:54,446,209...54,485,980
Ensembl chr17:54,446,108...54,485,297 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:91,608,936...91,617,993
Ensembl chr  X:91,529,855...91,617,086 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G UBE2U ubiquitin conjugating enzyme E2 U involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:45,947,637...45,998,353
Ensembl chr 5:45,947,639...45,997,722 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:36,339,711...36,467,035
Ensembl chr 4:36,354,922...36,466,880 		JBrowse link
G UNG uracil DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:67,736,215...67,774,756
Ensembl chr 5:67,736,730...67,809,206 		JBrowse link
G USP3 ubiquitin specific peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:28,073,484...28,184,121
Ensembl chr30:28,072,655...28,181,749 		JBrowse link
G USP45 ubiquitin specific peptidase 45 acts_upstream_of_or_within ISO (PMID:25538220) MGI PMID:25538220 NCBI chr12:57,637,890...57,706,562
Ensembl chr12:57,642,515...57,706,511 		JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,505,968...22,821,027
Ensembl chr21:22,507,162...22,820,824 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:30,820,488...30,872,515
Ensembl chr 8:30,821,096...30,872,512 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA InterPro GO_REF:0000002 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11950998), (PMID:9661901) UniProt
MGI
Ensembl		 PMID:9661901 PMID:11950998 GO_REF:0000043 GO_REF:0000107 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12555660) Ensembl
MGI
UniProt		 PMID:12555660 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19633665) Ensembl
MGI		 PMID:19633665 GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:16,402,821...16,429,095
Ensembl chr16:16,402,933...16,429,037 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,933,721...38,959,306
Ensembl chr 8:38,933,805...38,959,306 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15980864), (PMID:21746928)
(PMID:21746928)		 Ensembl
MGI		 PMID:15980864 PMID:21746928 GO_REF:0000107 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160 		JBrowse link
G ZNF668 zinc finger protein 668 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,157,767...17,166,397
Ensembl chr 6:17,158,384...17,166,174 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA2A adrenoceptor alpha 2A ISO RGD PMID:15351511 RGD:1625185 NCBI chr28:22,366,989...22,392,163
Ensembl chr28:22,367,780...22,370,684 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G CDC45 cell division cycle 45 involved_in IEA UniProt GO_REF:0000043 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
G CDC6 cell division cycle 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:22,303,549...22,317,046
Ensembl chr 9:22,226,719...22,316,963 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chr20:55,248,286...55,276,425
Ensembl chr20:55,248,288...55,276,900 		JBrowse link
G CHTF8 chromosome transmission fidelity factor 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:80,510,617...80,521,356
Ensembl chr 5:80,509,002...80,520,233 		JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G DNAJC2 DnaJ heat shock protein family (Hsp40) member C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7559602) Ensembl
MGI		 PMID:7559602 GO_REF:0000107 NCBI chr18:16,866,795...16,894,143
Ensembl chr18:16,887,901...16,893,857 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:28,192,338...28,209,512 JBrowse link
G E4F1 E4F transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226446) Ensembl
MGI		 PMID:15226446 GO_REF:0000107 NCBI chr 6:38,743,346...38,752,427
Ensembl chr 6:38,743,355...38,752,403 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:37,584,326...37,595,316 JBrowse link
G FAM111B FAM111 trypsin like peptidase B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:37,611,303...37,622,590
Ensembl chr18:37,612,044...37,622,515 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12861020) UniProt
MGI		 PMID:12861020 GO_REF:0000043 NCBI chr18:54,680,627...54,686,502
Ensembl chr18:54,681,760...54,682,902 		JBrowse link
G FHIT fragile histidine triad diadenosine triphosphatase acts_upstream_of_or_within ISO (PMID:15254237) MGI PMID:15254237 NCBI chr20:29,735,380...31,113,859
Ensembl chr20:30,356,572...31,113,859 		JBrowse link
G GINS1 GINS complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16287864) InterPro
MGI
UniProt		 PMID:16287864 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr23:1,567,723...1,598,910
Ensembl chr23:1,567,825...1,590,464 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:66,982,033...66,997,115
Ensembl chr 5:66,982,137...67,000,338 		JBrowse link
G GINS3 GINS complex subunit 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 2:58,233,425...58,244,429
Ensembl chr 2:58,234,321...58,245,219 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G GMNC geminin coiled-coil domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:22,790,364...22,800,569
Ensembl chr34:22,790,972...22,800,852 		JBrowse link
G GRWD1 glutamate rich WD repeat containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,814,402...107,821,107
Ensembl chr 1:107,815,063...107,820,858 		JBrowse link
G HELB DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
G HYCC2 hyccin PI4KA lipid kinase complex subunit 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr37:10,162,728...10,240,061
Ensembl chr37:10,169,973...10,238,994 		JBrowse link
G KIN Kin17 DNA and RNA binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:28,325,243...28,360,790
Ensembl chr 2:28,324,723...28,360,773 		JBrowse link
G LIG1 DNA ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11896201) UniProt
MGI		 PMID:11896201 GO_REF:0000043 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LOC119870425 histone-binding protein RBBP4-like involved_in IEA UniProt GO_REF:0000043
G LOC119878057 histone-binding protein RBBP7 involved_in IEA UniProt GO_REF:0000043
G LOC611847 DNA polymerase delta 4, accessory subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr18:50,101,211...50,103,045 JBrowse link
G LRWD1 leucine rich repeats and WD repeat domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:7,711,045...7,717,174
Ensembl chr 6:7,711,051...7,717,179 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 2:23,288,249...23,344,060
Ensembl chr 2:23,292,253...23,344,719 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr10:28,721,421...28,738,457
Ensembl chr10:28,721,660...28,738,390 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor NOT|involved_in ISO (PMID:23401855) UniProt PMID:23401855 NCBI chr24:15,850,602...15,893,452
Ensembl chr24:15,814,770...15,893,458 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor NOT|involved_in ISO (PMID:23401855)
(MGI:5295089|PMID:21987787), (MGI:5525985|PMID:23401855)		 UniProt PMID:21987787 PMID:23401855 MGI:5295089 MGI:5525985 NCBI chr 1:58,746,637...58,862,550
Ensembl chr 1:58,767,159...58,859,282 		JBrowse link
G NFIA nuclear factor I A involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:48,489,521...49,064,867
Ensembl chr 5:48,496,773...49,064,848 		JBrowse link
G NFIB nuclear factor I B involved_in IEA UniProt GO_REF:0000043 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NFIC nuclear factor I C involved_in IEA UniProt GO_REF:0000043 NCBI chr20:55,920,614...55,980,307
Ensembl chr20:55,914,855...56,014,907 		JBrowse link
G NFIX nuclear factor I X involved_in IEA UniProt GO_REF:0000043 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G ORC1 origin recognition complex subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:8,965,339...8,995,527
Ensembl chr15:8,971,732...8,995,481 		JBrowse link
G ORC2 origin recognition complex subunit 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr37:10,109,825...10,155,588
Ensembl chr37:10,111,496...10,151,876 		JBrowse link
G ORC3 origin recognition complex subunit 3 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:47,047,341...47,108,126
Ensembl chr12:47,047,195...47,108,117 		JBrowse link
G ORC4 origin recognition complex subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:34977916) InterPro
MGI
Ensembl
UniProt		 PMID:34977916 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr19:49,728,812...49,815,599
Ensembl chr19:49,728,344...49,815,604 		JBrowse link
G ORC5 origin recognition complex subunit 5 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr18:16,088,143...16,183,813
Ensembl chr18:16,088,184...16,166,718 		JBrowse link
G ORC6 origin recognition complex subunit 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:8,421,297...8,427,972
Ensembl chr15:8,421,318...8,427,821 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:28,832,388...28,846,824 JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA UniProt GO_REF:0000043 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8106564), (PMID:9584195)
(PMID:8125989)		 RGD
MGI
Ensembl
InterPro
UniProt		 PMID:7503737 PMID:8106564 PMID:8125989 PMID:8576284 PMID:9584195 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:1580606 RGD:2307013 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9584195) RGD
MGI
UniProt
Ensembl
InterPro		 PMID:7503737 PMID:9584195 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:2307013 NCBI chr18:51,875,860...51,904,492
Ensembl chr18:51,875,903...51,904,746 		JBrowse link
G POLB DNA polymerase beta involved_in IEA UniProt GO_REF:0000043 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA		 RGD
UniProt		 PMID:10541966 GO_REF:0000043 RGD:729526 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:10541966 GO_REF:0000002 GO_REF:0000043 RGD:729526
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in IEA InterPro GO_REF:0000002
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA UniProt GO_REF:0000043 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:951,888...975,966 JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:68,638,459...68,660,942
Ensembl chr 2:68,638,498...68,660,910 		JBrowse link
G RBBP7 RB binding protein 7, chromatin remodeling factor involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:12,981,852...13,006,049
Ensembl chr  X:12,981,860...13,006,045 		JBrowse link
G RECQL RecQ like helicase involved_in IEA UniProt GO_REF:0000117 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G RFC1 replication factor C subunit 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:73,062,292...73,136,576
Ensembl chr 3:73,062,329...73,135,096 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:6,119,203...6,159,293
Ensembl chr 6:6,119,164...6,160,886 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr25:6,469,865...6,486,935
Ensembl chr25:6,469,867...6,486,849 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr34:19,361,024...19,377,289
Ensembl chr34:19,361,044...19,377,294 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr26:14,428,661...14,439,641
Ensembl chr26:14,428,695...14,438,986 		JBrowse link
G RPA1 replication protein A1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA InterPro
UniProt
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr24:47,219,977...47,248,791 JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
G SDE2 SDE2 telomere maintenance homolog involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:38,857,220...38,871,584
Ensembl chr 7:38,857,234...38,870,157 		JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15998811) Ensembl
MGI		 PMID:15998811 GO_REF:0000107 NCBI chr30:38,231,844...38,306,665
Ensembl chr30:38,232,680...38,382,635 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G SSRP1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:38,802,673...38,812,134
Ensembl chr18:38,802,619...38,812,131 		JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr15:18,387,624...18,429,553
Ensembl chr15:18,388,512...18,429,553 		JBrowse link
G TBRG1 transforming growth factor beta regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,771,130...9,784,125
Ensembl chr 5:9,773,214...9,783,945 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:52,584,913...52,629,731
Ensembl chr 3:52,584,454...52,629,164 		JBrowse link
G TOP1 DNA topoisomerase I involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11756244) Ensembl
MGI
TreeGrafter		 PMID:11756244 GO_REF:0000107 GO_REF:0000118 NCBI chr24:29,075,267...29,166,733
Ensembl chr24:29,075,492...29,165,864 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20511593) Ensembl
MGI		 PMID:20511593 GO_REF:0000107 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in IEA InterPro GO_REF:0000002 NCBI chr28:13,672,772...13,680,732
Ensembl chr28:13,676,304...13,680,044 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
G WRN WRN RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9789047) InterPro
UniProt
MGI
Ensembl		 PMID:9789047 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
G ZPR1 ZPR1 zinc finger involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:17068332) Ensembl
UniProt		 PMID:17068332 GO_REF:0000107 NCBI chr 5:16,778,803...16,787,493
Ensembl chr 5:16,778,832...16,787,105 		JBrowse link
DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNE1 cyclin E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12941272) Ensembl
MGI		 PMID:12941272 GO_REF:0000107 NCBI chr 1:121,688,622...121,697,533
Ensembl chr 1:121,688,796...121,697,649 		JBrowse link
G CCNE2 cyclin E2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12941272) Ensembl
MGI		 PMID:12941272 GO_REF:0000107 NCBI chr29:39,534,872...39,551,141
Ensembl chr29:39,534,968...39,546,566 		JBrowse link
G CDC45 cell division cycle 45 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
G CDC6 cell division cycle 6 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 9:22,303,549...22,317,046
Ensembl chr 9:22,226,719...22,316,963 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 2:23,288,249...23,344,060
Ensembl chr 2:23,292,253...23,344,719 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr10:28,721,421...28,738,457
Ensembl chr10:28,721,660...28,738,390 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G NOC3L NOC3 like DNA replication regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:8,484,224...8,519,840
Ensembl chr28:8,484,226...8,519,692 		JBrowse link
G ORC1 origin recognition complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:8,965,339...8,995,527
Ensembl chr15:8,971,732...8,995,481 		JBrowse link
G ORC2 origin recognition complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:10,109,825...10,155,588
Ensembl chr37:10,111,496...10,151,876 		JBrowse link
G ORC3 origin recognition complex subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:47,047,341...47,108,126
Ensembl chr12:47,047,195...47,108,117 		JBrowse link
G ORC4 origin recognition complex subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:49,728,812...49,815,599
Ensembl chr19:49,728,344...49,815,604 		JBrowse link
G ORC5 origin recognition complex subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:16,088,143...16,183,813
Ensembl chr18:16,088,184...16,166,718 		JBrowse link
G ORC6 origin recognition complex subunit 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:8,421,297...8,427,972
Ensembl chr15:8,421,318...8,427,821 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:51,875,860...51,904,492
Ensembl chr18:51,875,903...51,904,746 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:951,888...975,966 JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:30,517,172...30,578,664
Ensembl chr23:30,516,125...30,578,108 		JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12429860) TreeGrafter
MGI		 PMID:12429860 GO_REF:0000118 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
DNA replication, Okazaki fragment processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr18:54,680,627...54,686,502
Ensembl chr18:54,681,760...54,682,902 		JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:2,117,446...2,127,893
Ensembl chr17:2,117,446...2,127,893 		JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:49,345,258...49,352,944
Ensembl chr20:49,345,266...49,355,167 		JBrowse link
DNA replication, synthesis of primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELB DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,875,860...51,904,492
Ensembl chr18:51,875,903...51,904,746 		JBrowse link
G POLRMT RNA polymerase mitochondrial involved_in IEA GOC GO_REF:0000108 NCBI chr20:57,908,327...57,920,016
Ensembl chr20:57,908,351...57,920,027 		JBrowse link
G PRIM1 DNA primase subunit 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr10:951,888...975,966 JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA InterPro GO_REF:0000002 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
DNA strand displacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chr24:47,219,977...47,248,791 JBrowse link
DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERT telomerase reverse transcriptase involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:11,288,622...11,307,790
Ensembl chr34:11,288,622...11,307,951 		JBrowse link
DNA strand elongation involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM3 minichromosome maintenance complex component 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:4084590) UniProt PMID:4084590 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS1 GINS complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:1,567,723...1,598,910
Ensembl chr23:1,567,825...1,590,464 		JBrowse link
DNA strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMC1 DNA meiotic recombinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G RAD51 RAD51 recombinase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:16,402,821...16,429,095
Ensembl chr16:16,402,933...16,429,037 		JBrowse link
DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXO1 exonuclease 1 involved_in ISO (PMID:26240375) UniProt PMID:26240375 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:65,218,288...65,319,696
Ensembl chr 7:65,218,297...65,297,099 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN2D cyclin dependent kinase inhibitor 2D involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,607,382...50,609,929
Ensembl chr20:50,607,674...50,609,482 		JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,230,345...19,245,518
Ensembl chr 9:19,230,399...19,245,624 		JBrowse link
G LOC611847 DNA polymerase delta 4, accessory subunit involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr18:50,101,211...50,103,045 JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:11470886) UniProt PMID:11470886 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO (PMID:24191025), (PMID:3335506)
(PMID:1730053)		 UniProt PMID:1730053 PMID:3335506 PMID:24191025 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLH DNA polymerase eta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,034,544...12,070,305
Ensembl chr12:12,034,583...12,069,707 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (MGI:5297784|PMID:17612497) UniProt PMID:17612497 MGI:5297784 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
DNA synthesis involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TK1 thymidine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:2,959,450...2,970,908
Ensembl chr 9:2,959,488...2,971,064 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23993650) Ensembl
MGI		 PMID:23993650 GO_REF:0000107 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906 		JBrowse link
DNA topological change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,310,911...23,344,083
Ensembl chr19:23,310,986...23,337,683 		JBrowse link
G HMGB2 high mobility group box 2 involved_in ISO (PMID:11275566) AgBase PMID:11275566 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606 		JBrowse link
G TOP1 DNA topoisomerase I acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16261531), (PMID:7842491) RGD
MGI
TreeGrafter
Ensembl
InterPro
UniProt		 PMID:1332866 PMID:7842491 PMID:16261531 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:1580856 NCBI chr24:29,075,267...29,166,733
Ensembl chr24:29,075,492...29,165,864 		JBrowse link
G TOP2A DNA topoisomerase II alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:1331984), (PMID:9224616) RGD
MGI
Ensembl
UniProt
InterPro		 PMID:1331984 PMID:9224616 PMID:11334111 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 RGD:1580614 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr23:18,159,521...18,206,413
Ensembl chr23:18,146,095...18,206,287 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:41,262,820...41,290,101
Ensembl chr 5:41,263,017...41,290,100 		JBrowse link
G TOP3B DNA topoisomerase III beta involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr26:31,198,371...31,223,133
Ensembl chr26:31,198,382...31,215,134 		JBrowse link
DNA transposition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THAP9 THAP domain containing 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:6,852,057...6,875,660
Ensembl chr32:6,852,116...6,870,696 		JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G CDC45 cell division cycle 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
G GINS1 GINS complex subunit 1 involved_in ISO (PMID:22474384) ComplexPortal PMID:22474384 NCBI chr23:1,567,723...1,598,910
Ensembl chr23:1,567,825...1,590,464 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,982,033...66,997,115
Ensembl chr 5:66,982,137...67,000,338 		JBrowse link
G GINS3 GINS complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,233,425...58,244,429
Ensembl chr 2:58,234,321...58,245,219 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10531422) Ensembl
MGI
TreeGrafter		 PMID:10531422 GO_REF:0000107 GO_REF:0000118 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15917436) TreeGrafter
MGI
Ensembl		 PMID:15917436 GO_REF:0000107 GO_REF:0000118 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,721,421...28,738,457
Ensembl chr10:28,721,660...28,738,390 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15917436) Ensembl
MGI
TreeGrafter		 PMID:15917436 GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15917436) Ensembl
MGI
TreeGrafter		 PMID:15917436 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G PURA purine rich element binding protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,325,630...35,345,366
Ensembl chr 2:35,330,902...35,332,835 		JBrowse link
G RAD51 RAD51 recombinase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RECQL RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in ISO (PMID:26446790) FlyBase PMID:26446790 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11431692) Ensembl
MGI		 PMID:11431692 GO_REF:0000107 NCBI chr28:13,672,772...13,680,732
Ensembl chr28:13,676,304...13,680,044 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAZ1A bromodomain adjacent to zinc finger domain 1A involved_in ISO (PMID:12434153) UniProt PMID:12434153 NCBI chr 8:13,604,694...13,694,508
Ensembl chr 8:13,605,182...13,693,847 		JBrowse link
G CHRAC1 chromatin accessibility complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:35,162,189...35,164,286
Ensembl chr13:35,161,767...35,164,101 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 5:66,982,033...66,997,115
Ensembl chr 5:66,982,137...67,000,338 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G HELB DNA helicase B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11557815) Ensembl
MGI		 PMID:11557815 GO_REF:0000107 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
G LOC482337 minichromosome maintenance complex binding protein pseudogene involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:32,120,610...32,122,806 JBrowse link
G LOC611847 DNA polymerase delta 4, accessory subunit involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7503737 GO_REF:0000118 RGD:2307013 NCBI chr18:50,101,211...50,103,045 JBrowse link
G MCMBP minichromosome maintenance complex binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:29,946,228...29,996,711
Ensembl chr28:29,947,731...29,996,846 		JBrowse link
G ORC6 origin recognition complex subunit 6 acts_upstream_of_or_within ISO (PMID:20219456) MGI PMID:20219456 NCBI chr15:8,421,297...8,427,972
Ensembl chr15:8,421,318...8,427,821 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7503737 PMID:9620226 GO_REF:0000118 RGD:2299945 RGD:2307013 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:7503737 GO_REF:0000107 RGD:2307013
G POLD3 DNA polymerase delta 3, accessory subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:7503737 GO_REF:0000107 RGD:2307013 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,757,779...67,760,417
Ensembl chr11:67,758,918...67,760,374 		JBrowse link
G POLE4 DNA polymerase epsilon 4, accessory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:48,241,641...48,251,679 JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G POLN DNA polymerase nu involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA InterPro GO_REF:0000002 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G PRIM2 DNA primase subunit 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:24,504,202...24,811,942
Ensembl chr12:24,504,700...24,811,924 		JBrowse link
G RFC1 replication factor C subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,062,292...73,136,576
Ensembl chr 3:73,062,329...73,135,096 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:6,119,203...6,159,293
Ensembl chr 6:6,119,164...6,160,886 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:6,469,865...6,486,935
Ensembl chr25:6,469,867...6,486,849 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr34:19,361,024...19,377,289
Ensembl chr34:19,361,044...19,377,294 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:14,428,661...14,439,641
Ensembl chr26:14,428,695...14,438,986 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:30,820,488...30,872,515
Ensembl chr 8:30,821,096...30,872,512 		JBrowse link
G WDR18 WD repeat domain 18 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:57,712,854...57,717,988
Ensembl chr20:57,712,740...57,718,107 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:7,298,789...7,316,665
Ensembl chr32:7,298,790...7,317,001 		JBrowse link
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO (MGI:3698695|PMID:17121854) UniProt PMID:17121854 MGI:3698695 NCBI chr21:29,719,386...29,741,658
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21211721) InterPro
MGI
TreeGrafter
Ensembl		 PMID:21211721 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:45,466,808...45,474,953
Ensembl chr20:45,466,805...45,473,009 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,886,127...22,288,513
Ensembl chr17:21,889,862...22,288,504 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 ISO (PMID:16845393)
(PMID:17476307)
(PMID:9398843)		 UniProt
MGI		 PMID:9398843 PMID:16845393 PMID:17476307 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr  X:123,081,262...123,143,509
Ensembl chr  X:123,081,050...123,140,133 		JBrowse link
G CDCA5 cell division cycle associated 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:52,115,081...52,129,223
Ensembl chr18:52,115,203...52,120,817 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:22,052,256...22,145,675
Ensembl chr26:21,427,961...22,240,624 		JBrowse link
G CMTR1 cap methyltransferase 1 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr12:6,454,605...6,505,127
Ensembl chr12:6,454,652...6,504,776 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:22325354) UniProt PMID:22325354 NCBI chr24:20,333,593...20,390,341 JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 involved_in ISO (PMID:22325354) UniProt PMID:22325354 NCBI chr 2:58,361,328...58,441,701
Ensembl chr 2:58,360,838...58,432,371 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12615897) Ensembl
MGI		 PMID:12615897 GO_REF:0000107 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G DDX1 DEAD-box helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,432,060...11,467,000
Ensembl chr17:11,432,136...11,466,990 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,676,686...25,684,270
Ensembl chr33:25,677,076...25,684,175 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:26,342,419...26,350,561
Ensembl chr 9:26,344,438...26,349,997 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO (PMID:17289582) ComplexPortal PMID:17289582 NCBI chr 6:39,127,433...39,129,487 JBrowse link
G EMILIN2 elastin microfibril interfacer 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:69,521,430...69,580,963 JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:11707424)
(PMID:15199134)
(PMID:17912366)		 UniProt
MGI
Ensembl		 PMID:11707424 PMID:15199134 PMID:17912366 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22614755) Ensembl
MGI		 PMID:22614755 GO_REF:0000107 NCBI chr25:29,785,641...29,812,536
Ensembl chr25:29,787,132...29,811,112 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,028,537...43,082,038
Ensembl chr 8:43,042,563...43,187,969 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,313,412...72,417,729
Ensembl chr 2:72,328,362...72,414,058 		JBrowse link
G GGN gametogenetin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23451117) InterPro
MGI		 PMID:23451117 GO_REF:0000002 NCBI chr 1:114,615,817...114,618,950
Ensembl chr 1:114,615,117...114,618,963 		JBrowse link
G GGN gametogenetin involved_in IEA InterPro GO_REF:0000002
G HPF1 histone PARylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:20,622,781...20,645,459
Ensembl chr25:20,622,774...20,644,822 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17554302)
(PMID:15175260)
(PMID:12531011)
(PMID:12531011), (PMID:15175260)		 Ensembl
MGI		 PMID:12531011 PMID:15175260 PMID:17554302 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G LOC119880046 RAD52 motif-containing protein 1-like involved_in IEA UniProt GO_REF:0000117
G LOC483061 DNA excision repair protein ERCC-1-like involved_in IEA UniProt GO_REF:0000117 NCBI chr17:36,535,679...36,536,408 JBrowse link
G LOC610150 lys-63-specific deubiquitinase BRCC36-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr32:24,754,628...24,755,868 JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G MARF1 meiosis regulator and mRNA stability factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23090997) Ensembl
MGI		 PMID:23090997 GO_REF:0000107 NCBI chr 6:28,194,771...28,231,908
Ensembl chr 6:28,041,318...28,262,184 		JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,795,289...18,814,677
Ensembl chr 9:18,796,799...18,814,682 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17291760) UniProt
MGI
Ensembl
InterPro		 PMID:17291760 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17912366) Ensembl
MGI		 PMID:17912366 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G NBN nibrin involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21270334) Ensembl
MGI
TreeGrafter		 PMID:21270334 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:17,705,966...17,716,743
Ensembl chr15:17,705,975...17,716,094 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21270334)
(PMID:21211721)		 MGI
TreeGrafter
Ensembl		 PMID:21211721 PMID:21270334 GO_REF:0000107 GO_REF:0000118 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,643,439...25,676,979
Ensembl chr33:25,643,883...25,677,462 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:22,165,338...22,176,847
Ensembl chr 6:22,165,338...22,176,441 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12604618)
(PMID:11751629)		 UniProt
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:11751629 PMID:12604618 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21743440) Ensembl
MGI		 PMID:21743440 GO_REF:0000107 NCBI chr24:19,741,398...19,771,675
Ensembl chr24:19,699,792...19,771,679 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA UniProt GO_REF:0000117 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
G RAD54L RAD54 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15175260) Ensembl
MGI		 PMID:15175260 GO_REF:0000107 NCBI chr15:14,111,168...14,139,819
Ensembl chr15:14,111,157...14,139,301 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:23,574,478...23,655,305
Ensembl chr21:23,579,370...23,655,290 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G SETX senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,900,004...51,980,694
Ensembl chr 9:51,901,233...51,978,833 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:13,132,945...13,201,214
Ensembl chr17:13,133,236...13,201,759 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:69,359,286...69,505,067
Ensembl chr 7:69,358,447...69,621,067 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:61,023,564...61,107,599
Ensembl chr 8:61,024,084...61,107,506 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:22,693,203...22,707,054
Ensembl chr35:22,693,110...22,707,008 		JBrowse link
G TEDC1 tubulin epsilon and delta complex 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:72,787,754...72,795,593
Ensembl chr 8:72,788,592...72,795,326 		JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:38,815,845...38,838,184
Ensembl chr18:38,816,323...38,838,192 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17912366) Ensembl
MGI		 PMID:17912366 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:17696610) Ensembl
MGI
UniProt		 PMID:17696610 GO_REF:0000024 GO_REF:0000107 NCBI chr34:11,522,940...11,539,885
Ensembl chr34:11,522,940...11,539,885 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:36,339,711...36,467,035
Ensembl chr 4:36,354,922...36,466,880 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11751629), (PMID:9875844) InterPro
MGI
Ensembl		 PMID:9875844 PMID:11751629 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12531011) UniProt
MGI
Ensembl		 PMID:12531011 GO_REF:0000107 GO_REF:0000117 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:11751629) MGI PMID:11751629 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr32:32,344,348...32,421,485
Ensembl chr32:32,344,791...32,418,441 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26490168) Ensembl
MGI
TreeGrafter		 PMID:26490168 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788 		JBrowse link
G BRME1 break repair meiotic recombinase recruitment factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:48,566,165...48,586,951
Ensembl chr20:48,566,525...48,583,329 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:8,240,270...8,297,269
Ensembl chr20:8,240,311...8,297,568 		JBrowse link
G GPHA2 glycoprotein hormone subunit alpha 2 acts_upstream_of_or_within ISO (PMID:30718482) MGI PMID:30718482 NCBI chr18:52,211,748...52,244,591
Ensembl chr18:52,211,716...52,240,823
Ensembl chr18:52,211,716...52,240,823 		JBrowse link
G HSF2BP heat shock transcription factor 2 binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,543,448...37,643,534
Ensembl chr31:37,503,052...37,643,505 		JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr29:16,424,088...16,462,094
Ensembl chr29:16,426,318...16,460,599 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27760146) Ensembl
MGI		 PMID:27760146 GO_REF:0000107 NCBI chr24:42,345,595...42,360,851
Ensembl chr24:42,345,547...42,384,481 		JBrowse link
G TERB1 telomere repeat binding bouquet formation protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30718482) Ensembl
MGI		 PMID:30718482 GO_REF:0000107 NCBI chr 5:82,486,920...82,537,347
Ensembl chr 5:82,487,597...82,534,561 		JBrowse link
G TERB2 telomere repeat binding bouquet formation protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30718482) Ensembl
MGI		 PMID:30718482 GO_REF:0000107 NCBI chr30:11,414,656...11,436,119
Ensembl chr30:11,414,737...11,436,113 		JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELQ helicase, POLQ like involved_in ISO (PMID:34937945) UniProt PMID:34937945 NCBI chr32:7,245,867...7,290,138
Ensembl chr32:7,245,230...7,290,014 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462 		JBrowse link
G LIG3 DNA ligase 3 involved_in ISO (PMID:24837021)
(MGI:5014103|PMID:21655080)		 BHF-UCL PMID:21655080 PMID:24837021 MGI:5014103 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:22,165,338...22,176,847
Ensembl chr 6:22,165,338...22,176,441 		JBrowse link
G POLN DNA polymerase nu involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:41,885,779...41,906,252
Ensembl chr27:41,886,052...41,891,759 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,517,172...30,578,664
Ensembl chr23:30,516,125...30,578,108 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:66,982,033...66,997,115
Ensembl chr 5:66,982,137...67,000,338 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:24,055,720...24,068,469
Ensembl chr16:24,056,963...24,069,052 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:28,721,421...28,738,457
Ensembl chr10:28,721,660...28,738,390 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:16,424,088...16,462,094
Ensembl chr29:16,426,318...16,460,599 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,502,777...47,559,012
Ensembl chr 2:47,503,762...47,558,889 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,517,172...30,578,664
Ensembl chr23:30,516,125...30,578,108 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134 		JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,505,968...22,821,027
Ensembl chr21:22,507,162...22,820,824 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,517,531...55,527,071
Ensembl chr20:55,505,916...55,523,736 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:45,461,135...45,465,922
Ensembl chr20:45,461,676...45,465,417 		JBrowse link
G AP5S1 adaptor related protein complex 5 subunit sigma 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr24:17,537,539...17,543,834
Ensembl chr24:17,537,544...17,543,901 		JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,847,699...12,858,769
Ensembl chr 6:12,847,713...12,858,681 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19061978) Ensembl
MGI		 PMID:19061978 GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G AUNIP aurora kinase A and ninein interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,097,435...74,116,824
Ensembl chr 2:74,097,508...74,118,085 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485900) InterPro
MGI
TreeGrafter		 PMID:15485900 GO_REF:0000002 GO_REF:0000118 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,411,009...38,440,367
Ensembl chr27:38,411,075...38,439,958 		JBrowse link
G CRLS1 cardiolipin synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:15,814,111...15,837,485
Ensembl chr24:15,814,770...15,893,458 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) UniProt PMID:27153538 NCBI chr 2:14,566,177...14,659,774
Ensembl chr 2:14,565,560...14,659,353 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:26833090) UniProt PMID:26833090 NCBI chr22:52,339,011...52,372,618 JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,028,537...43,082,038
Ensembl chr 8:43,042,563...43,187,969 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016) UniProt PMID:20603015 PMID:20603016 NCBI chr 3:38,013,744...38,053,096
Ensembl chr 3:38,013,739...38,052,202 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G H2AX H2A.X variant histone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11934988) Ensembl
MGI		 PMID:11934988 GO_REF:0000107 NCBI chr 5:14,765,625...14,766,590
Ensembl chr 5:14,766,126...14,766,557 		JBrowse link
G HELQ helicase, POLQ like involved_in ISO (PMID:19995904) UniProt PMID:19995904 NCBI chr32:7,245,867...7,290,138
Ensembl chr32:7,245,230...7,290,014 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:106,848,455...106,866,540
Ensembl chr  X:106,848,455...106,866,540 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:93,596...104,908
Ensembl chr16:93,626...125,597 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,137,101...67,154,443
Ensembl chr11:67,137,710...67,154,486 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,325,522...43,361,669
Ensembl chr 7:43,326,315...43,361,362 		JBrowse link
G KASH5 KASH domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24062341) Ensembl
MGI		 PMID:24062341 GO_REF:0000107 NCBI chr 1:107,074,010...107,114,460
Ensembl chr 1:107,074,010...107,097,762 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G LOC119865601 checkpoint protein HUS1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119872575 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107
G LOC119876110 aurora kinase A and ninein-interacting protein-like involved_in IEA Ensembl GO_REF:0000107
G LOC119877459 checkpoint protein HUS1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC485121 lysine-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr21:6,002,292...6,037,344
Ensembl chr21:5,987,723...6,004,783 		JBrowse link
G MBTD1 mbt domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:27,010,554...27,078,417
Ensembl chr 9:27,013,483...27,078,202 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:15,850,602...15,893,452
Ensembl chr24:15,814,770...15,893,458 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:58,746,637...58,862,550
Ensembl chr 1:58,767,159...58,859,282 		JBrowse link
G MEIOB meiosis specific with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,048,335...39,075,957
Ensembl chr 6:39,048,278...39,076,035 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:55,584,884...55,713,996
Ensembl chr12:55,588,888...55,713,341 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,127,152...58,149,709
Ensembl chr 3:58,127,669...58,193,005 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr37:2,157,357...2,163,812
Ensembl chr37:2,157,356...2,161,091 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:546,964...551,360
Ensembl chr10:546,964...551,107 		JBrowse link
G NBN nibrin involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:19,330,815...19,363,240
Ensembl chr 6:19,330,843...19,363,239 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr13:23,078,143...23,288,302
Ensembl chr13:23,078,173...23,288,304 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G PALB2 partner and localizer of BRCA2 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:22,209,711...22,237,798
Ensembl chr 6:22,209,384...22,237,745 		JBrowse link
G POGZ pogo transposable element derived with ZNF domain involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:26721387) Ensembl
UniProt		 PMID:26721387 GO_REF:0000107 NCBI chr17:60,464,609...60,511,735
Ensembl chr17:60,465,230...60,511,934 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G POLN DNA polymerase nu involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:18,085,048...18,092,861
Ensembl chr 6:18,085,116...18,092,854 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:6,883,612...6,985,291
Ensembl chr36:6,889,622...6,984,974 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22711701) Ensembl
MGI		 PMID:22711701 GO_REF:0000107 NCBI chr24:19,741,398...19,771,675
Ensembl chr24:19,699,792...19,771,679 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RAD51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 ISO
IEA
ISS		 (PMID:15485900)
(PMID:15359272)
(PMID:16428451)		 RGD
MGI
Ensembl
InterPro
UniProt		 PMID:14755242 PMID:15359272 PMID:15485900 PMID:16428451 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 RGD:9831188 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G RAD51B RAD51 paralog B involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:41,779,435...42,357,362
Ensembl chr 8:41,778,714...42,357,298 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12379650) Ensembl
MGI
TreeGrafter		 PMID:12379650 GO_REF:0000107 GO_REF:0000118 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
G RAD54B RAD54 homolog B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16428451)
(PMID:19061978)		 MGI
Ensembl		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr29:39,096,680...39,195,054
Ensembl chr29:39,098,098...39,195,112 		JBrowse link
G RAD54L RAD54 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19061978)
(PMID:16428451)		 Ensembl
MGI		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr15:14,111,168...14,139,819
Ensembl chr15:14,111,157...14,139,301 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:65,218,288...65,319,696
Ensembl chr 7:65,218,297...65,297,099 		JBrowse link
G REC8 REC8 meiotic recombination protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22711701) Ensembl
MGI		 PMID:22711701 GO_REF:0000107 NCBI chr 8:4,165,637...4,171,488
Ensembl chr 8:4,165,879...4,171,486 		JBrowse link
G RECQL RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:67,776,285...67,953,337
Ensembl chr12:67,756,924...67,953,553 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,960,909...76,001,088
Ensembl chr 5:75,960,955...76,000,467 		JBrowse link
G RMI1 RecQ mediated genome instability 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:75,481,650...75,499,284
Ensembl chr 1:75,481,708...75,484,576 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,440,493...31,445,318
Ensembl chr 6:31,441,517...31,445,310 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:57,521,416...57,554,793
Ensembl chr 7:57,523,595...57,556,005 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,574,478...23,655,305
Ensembl chr21:23,579,370...23,655,290 		JBrowse link
G RPA1 replication protein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15470499) Ensembl
MGI
TreeGrafter		 PMID:15470499 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA TreeGrafter GO_REF:0000118
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
G SEM1 SEM1 26S proteasome subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15359272) TreeGrafter
MGI		 PMID:15359272 GO_REF:0000118 NCBI chr14:21,767,105...21,790,229 JBrowse link
G SFPQ splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (PMID:20813759) MGI PMID:20813759 NCBI chr15:6,879,955...6,896,309
Ensembl chr15:6,880,065...6,888,004 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr28:16,436,261...16,440,219
Ensembl chr28:16,436,377...16,439,742 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:87,192,988...87,285,678
Ensembl chr 1:87,194,867...87,285,606 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:13,132,945...13,201,214
Ensembl chr17:13,133,236...13,201,759 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:79,188...503,687
Ensembl chr35:79,185...514,797 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:55,229,510...55,234,645
Ensembl chr 9:55,229,550...55,234,489 		JBrowse link
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:49,951,633...49,953,281
Ensembl chr20:49,951,783...49,953,434 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:37,846,010...37,857,633
Ensembl chr13:37,846,149...37,857,668 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,262,820...41,290,101
Ensembl chr 5:41,263,017...41,290,100 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,517,172...30,578,664
Ensembl chr23:30,516,125...30,578,108 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G WDR48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24001775) Ensembl
MGI
TreeGrafter		 PMID:24001775 GO_REF:0000107 GO_REF:0000118 NCBI chr23:8,716,598...8,766,242
Ensembl chr23:8,715,700...8,764,678 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16777961) InterPro
MGI
TreeGrafter
Ensembl		 PMID:16777961 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:16,402,821...16,429,095
Ensembl chr16:16,402,933...16,429,037 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
G ZFYVE26 zinc finger FYVE-type containing 26 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:41,714,654...41,777,996
Ensembl chr 8:41,715,485...41,777,422 		JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:34,322,364...34,466,044
Ensembl chr24:34,321,570...34,485,544 		JBrowse link
G ZSWIM7 zinc finger SWIM-type containing 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:39,868,086...39,883,693
Ensembl chr 5:39,868,123...39,882,557 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:12,994,508...13,003,632
Ensembl chr16:12,994,479...12,998,435 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:24,704,044...24,724,561
Ensembl chr28:24,669,733...24,723,841 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:9,729,812...9,759,019
Ensembl chr28:9,729,814...9,759,008 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:9600082) GO_Central PMID:9600082 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G HMGB2 high mobility group box 2 involved_in ISO (PMID:9600082) GO_Central PMID:9600082 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606 		JBrowse link
G IFFO1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) UniProt PMID:31548606 NCBI chr27:38,454,397...38,467,815
Ensembl chr27:38,454,465...38,467,502 		JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127 		JBrowse link
G LIG1 DNA ligase 1 acts_upstream_of_or_within ISO (PMID:21655080) MGI PMID:21655080 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:21655080) MGI PMID:21655080 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16777961)
(PMID:10823907)		 Ensembl
MGI
TreeGrafter		 PMID:10823907 PMID:16777961 GO_REF:0000107 GO_REF:0000118 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15084308) Ensembl
MGI		 PMID:15084308 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
UniProt		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in ISO (PMID:16810316) UniProt PMID:16810316 NCBI chr13:23,078,143...23,288,302
Ensembl chr13:23,078,173...23,288,304 		JBrowse link
G PAXX PAXX non-homologous end joining factor involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:48,637,735...48,639,289
Ensembl chr 9:48,637,731...48,639,239 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:11470886) UniProt PMID:11470886 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLB DNA polymerase beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G POLM DNA polymerase mu involved_in IEA TreeGrafter GO_REF:0000118
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836881) InterPro
MGI		 PMID:23836881 GO_REF:0000002 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:6,883,612...6,985,291
Ensembl chr36:6,889,622...6,984,974 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G RNF8 ring finger protein 8 involved_in ISO (MGI:5293246|PMID:21857671), (MGI:5465398|PMID:22266820) UniProt PMID:21857671 PMID:22266820 MGI:5293246 MGI:5465398 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:16332963)
(PMID:18263876), (PMID:21187428), (PMID:24573677)		 UniProt PMID:16332963 PMID:18263876 PMID:21187428 PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:23,364,941...23,425,206
Ensembl chr37:23,367,220...23,419,248 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 NOT|involved_in ISO (PMID:16810316) UniProt PMID:16810316 NCBI chr 1:87,192,988...87,285,678
Ensembl chr 1:87,194,867...87,285,606 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17713479) Ensembl
MGI
TreeGrafter
UniProt		 PMID:17713479 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11751629) InterPro
MGI
TreeGrafter
Ensembl		 PMID:11751629 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
double-strand break repair via single-strand annealing, removal of nonhomologous ends term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:56,239,820...56,260,384
Ensembl chr  X:56,239,850...56,260,759 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:70,793,975...70,918,151
Ensembl chr 1:70,835,410...70,917,962 		JBrowse link
G FANCM FA complementation group M involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G HELQ helicase, POLQ like involved_in ISO (PMID:34937945) UniProt PMID:34937945 NCBI chr32:7,245,867...7,290,138
Ensembl chr32:7,245,230...7,290,014 		JBrowse link
G RAD54B RAD54 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:39,096,680...39,195,054
Ensembl chr29:39,098,098...39,195,112 		JBrowse link
G RAD54L RAD54 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:14,111,168...14,139,819
Ensembl chr15:14,111,157...14,139,301 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UBE2V1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO (PMID:11406273) MGI PMID:11406273 NCBI chr24:36,570,172...36,601,200
Ensembl chr24:36,570,172...36,603,212 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 acts_upstream_of_or_within ISO (PMID:11406273) MGI PMID:11406273 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO (PMID:24191025) UniProt PMID:24191025 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:42,597,792...42,607,576
Ensembl chr 9:42,597,792...42,607,576 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:43,150,885...43,247,324
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:42,587,173...43,111,739
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317 		JBrowse link
G POLH DNA polymerase eta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:12,034,544...12,070,305
Ensembl chr12:12,034,583...12,069,707 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:30,793,893...30,860,240
Ensembl chr 3:30,712,571...30,859,106 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11711549) InterPro
MGI
Ensembl		 PMID:11711549 GO_REF:0000002 GO_REF:0000107 NCBI chr10:43,150,885...43,247,324
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:67,776,285...67,953,337
Ensembl chr12:67,756,924...67,953,553 		JBrowse link
G-quadruplex DNA formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNBP CCHC-type zinc finger nucleic acid binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,860,915...2,929,307
Ensembl chr20:2,916,624...2,929,303 		JBrowse link
homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC10 histone deacetylase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,996,307...17,001,365
Ensembl chr10:16,995,762...17,078,262 		JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24388753) Ensembl
MGI		 PMID:24388753 GO_REF:0000107 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYREN cell cycle regulator of NHEJ involved_in ISO (MGI:6202149|PMID:30017584), (MGI:6716972|PMID:31795137) UniProt PMID:30017584 PMID:31795137 MGI:6202149 MGI:6716972 NCBI chr16:12,994,508...13,003,632
Ensembl chr16:12,994,479...12,998,435 		JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9823897) Ensembl
MGI
TreeGrafter		 PMID:9823897 GO_REF:0000107 GO_REF:0000118 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:9768755) GO_Central
MGI
TreeGrafter		 PMID:9768755 GO_REF:0000033 GO_REF:0000118 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16428437) MGI
TreeGrafter
Ensembl		 PMID:16428437 GO_REF:0000107 GO_REF:0000118 NCBI chr20:57,255,091...57,284,223
Ensembl chr20:57,254,384...57,283,981 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9875844) TreeGrafter
MGI		 PMID:9875844 GO_REF:0000118 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPX centromere protein X involved_in IEA Ensembl GO_REF:0000107
G DCLRE1A DNA cross-link repair 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:24,704,044...24,724,561
Ensembl chr28:24,669,733...24,723,841 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637614) Ensembl
MGI		 PMID:23637614 GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in ISO (PMID:24507776) UniProt PMID:24507776 NCBI chr 1:70,793,975...70,918,151
Ensembl chr 1:70,835,410...70,917,962 		JBrowse link
G EXO5 exonuclease 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:2,497,292...2,502,776 JBrowse link
G FAAP100 FA core complex associated protein 100 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:607,198...615,932
Ensembl chr 9:607,135...616,159 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,114,784...57,122,854 JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:119,119,920...119,124,964
Ensembl chr 1:119,120,463...119,124,038 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:38,013,744...38,053,096
Ensembl chr 3:38,013,739...38,052,202 		JBrowse link
G FANCA FA complementation group A involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:63,778,149...63,838,869
Ensembl chr 5:63,778,212...63,838,823 		JBrowse link
G FANCB FA complementation group B involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:10,690,826...11,140,838
Ensembl chr  X:11,095,200...11,141,029 		JBrowse link
G FANCC FA complementation group C involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:71,388,931...71,678,019
Ensembl chr 1:71,487,601...71,678,506 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:8,240,270...8,297,269
Ensembl chr20:8,240,311...8,297,568 		JBrowse link
G FANCE FA complementation group E involved_in IEA InterPro GO_REF:0000002 NCBI chr12:4,587,053...4,600,946
Ensembl chr12:4,587,041...4,600,405 		JBrowse link
G FANCF FA complementation group F involved_in IEA InterPro GO_REF:0000002 NCBI chr21:44,253,308...44,256,221
Ensembl chr21:44,255,134...44,256,618 		JBrowse link
G FANCG FA complementation group G involved_in IEA InterPro GO_REF:0000002 NCBI chr11:51,652,939...51,659,766
Ensembl chr11:51,652,944...51,659,751 		JBrowse link
G FANCL FA complementation group L involved_in IEA InterPro GO_REF:0000002 NCBI chr10:58,521,480...58,637,352
Ensembl chr10:58,521,552...58,637,482 		JBrowse link
G FANCM FA complementation group M involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G FIRRM FIGNL1 interacting regulator of recombination and mitosis involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:28,792,037...28,835,647
Ensembl chr 7:28,796,078...28,835,564 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,230,345...19,245,518
Ensembl chr 9:19,230,399...19,245,624 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:85,379,378...85,389,175 JBrowse link
G POLN DNA polymerase nu involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G RAD51 RAD51 recombinase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G RAD51D RAD51 paralog D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15781618) Ensembl
MGI		 PMID:15781618 GO_REF:0000107 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:75,960,909...76,001,088
Ensembl chr 5:75,960,955...76,000,467 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in ISO (PMID:36608669) UniProt PMID:36608669 NCBI chr 4:8,120,151...8,133,402
Ensembl chr 4:8,120,351...8,133,191 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17713479) Ensembl
MGI		 PMID:17713479 GO_REF:0000107 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:25404367) Ensembl
MGI		 PMID:25404367 GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:48,537,036...48,561,154 JBrowse link
G CD40LG CD40 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,001,421...107,023,007
Ensembl chr  X:107,010,890...107,023,006 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15280420) Ensembl
MGI		 PMID:15280420 GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G EXO1 exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14716311) Ensembl
MGI		 PMID:14716311 GO_REF:0000107 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254 		JBrowse link
G EXOSC3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598 		JBrowse link
G EXOSC6 exosome component 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17713479) Ensembl
MGI		 PMID:17713479 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743174) Ensembl
MGI		 PMID:12743174 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10430621)
(PMID:12743174)		 Ensembl
MGI		 PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16618598)
(PMID:17015724)		 Ensembl
MGI		 PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:8,147,160...8,154,401
Ensembl chr33:8,073,840...8,154,561 		JBrowse link
G RNF168 ring finger protein 168 involved_in ISO (MGI:4420833|PMID:20080757) UniProt PMID:20080757 MGI:4420833 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G RNF8 ring finger protein 8 involved_in ISO (MGI:4420833|PMID:20080757) UniProt PMID:20080757 MGI:4420833 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G SANBR SANT and BTB domain regulator of CSR involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:61,143,971...61,195,058
Ensembl chr10:61,123,655...61,193,241 		JBrowse link
G SWAP70 switching B cell complex subunit SWAP70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9642267) Ensembl
MGI		 PMID:9642267 GO_REF:0000107 NCBI chr21:32,910,547...32,985,617
Ensembl chr21:32,910,563...32,984,580 		JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within ISO (PMID:17015724) MGI PMID:17015724 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (MGI:5787846|PMID:27174992) UniProt PMID:27174992 MGI:5787846 NCBI chr 1:54,932,798...54,960,646
Ensembl chr 1:54,932,690...54,959,740 		JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16275384) Ensembl
MGI		 PMID:16275384 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758 		JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534 		JBrowse link
G RTP2 receptor transporter protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075 		JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPD1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chr37:7,010,421...7,025,912 JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534 		JBrowse link
lagging strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr29:16,424,088...16,462,094
Ensembl chr29:16,426,318...16,460,599 		JBrowse link
leading strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:67,757,779...67,760,417
Ensembl chr11:67,758,918...67,760,374 		JBrowse link
maintenance of DNA repeat elements term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:14,559,476...14,588,950
Ensembl chr 9:14,559,388...14,588,530 		JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G MSH6 mutS homolog 6 NOT|involved_in ISO (PMID:16388310) BHF-UCL PMID:16388310 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G TCF7L2 transcription factor 7 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
maintenance of rDNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RMI2 RecQ mediated genome instability 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,440,493...31,445,318
Ensembl chr 6:31,441,517...31,445,310 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20961378) Ensembl
MGI		 PMID:20961378 GO_REF:0000107 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160 		JBrowse link
meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C18H11orf80 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
G HORMAD1 HORMA domain containing 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:59,860,527...59,883,031
Ensembl chr17:59,860,934...59,882,980 		JBrowse link
G IHO1 interactor of HORMAD1 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:39,964,629...40,006,726
Ensembl chr20:39,965,480...39,990,756 		JBrowse link
G MEI4 meiotic double-stranded break formation protein 4 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:38,818,983...39,024,784
Ensembl chr12:38,818,705...39,023,864 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G RCE1 Ras converting CAAX endopeptidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:50,509,426...50,512,575
Ensembl chr18:50,509,768...50,517,543 		JBrowse link
G REC114 REC114 meiotic recombination protein involved_in ISO (MGI:6279435|PMID:30569039) UniProt PMID:30569039 MGI:6279435 NCBI chr30:36,744,066...36,846,483
Ensembl chr30:36,743,667...36,846,474 		JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr24:42,345,595...42,360,851
Ensembl chr24:42,345,547...42,384,481 		JBrowse link
G TOP6BL TOP6B like initiator of meiotic double strand breaks involved_in IEA InterPro GO_REF:0000002 NCBI chr18:50,512,681...50,617,666
Ensembl chr18:50,549,497...50,560,943 		JBrowse link
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) UniProt PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chr 3:31,067,936...31,188,066
Ensembl chr 3:31,028,026...31,186,827 		JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:42,345,595...42,360,851
Ensembl chr24:42,345,547...42,384,481 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26490168) Ensembl
MGI		 PMID:26490168 GO_REF:0000107 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788 		JBrowse link
G C8H14orf39 chromosome 8 C14orf39 homolog involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:35,486,476...35,542,214
Ensembl chr 8:35,487,228...35,542,218 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD51C RAD51 paralog C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
meiotic DNA recombinase assembly involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SWI5 SWI5 homologous recombination repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:55,229,510...55,234,645
Ensembl chr 9:55,229,550...55,234,489 		JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102152531 synaptonemal complex protein 3-like acts_upstream_of_or_within ISO (PMID:22164254) MGI PMID:22164254 NCBI chr  X:121,060,275...121,074,166 JBrowse link
G SPATA22 spermatogenesis associated 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22011390) InterPro
MGI
Ensembl		 PMID:22011390 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:47,322,817...47,338,202
Ensembl chr 9:47,322,820...47,338,108 		JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22164254) Ensembl
MGI
TreeGrafter		 PMID:22164254 GO_REF:0000107 GO_REF:0000118 NCBI chr17:52,538,909...52,681,495
Ensembl chr17:52,539,615...52,648,133 		JBrowse link
G TEX12 testis expressed 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22164254) Ensembl
MGI		 PMID:22164254 GO_REF:0000107 NCBI chr 5:20,968,201...20,972,710
Ensembl chr 5:20,968,185...20,972,850 		JBrowse link
meiotic gene conversion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF212 ring finger protein 212 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,453,856...91,483,674
Ensembl chr 3:91,453,367...91,474,547 		JBrowse link
G TEX11 testis expressed 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:54,958,568...55,268,720
Ensembl chr  X:54,958,568...55,268,684 		JBrowse link
meiotic joint molecule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3IP PSMC3 interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:55,229,510...55,234,645
Ensembl chr 9:55,229,550...55,234,489 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr29:16,424,088...16,462,094
Ensembl chr29:16,426,318...16,460,599 		JBrowse link
meiotic strand invasion involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3IP PSMC3 interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXO1 exonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10096563), (PMID:8674118)
(PMID:10359802), (PMID:10429667), (PMID:10851078), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:9500552)
(PMID:10747038)
(PMID:10657972), (PMID:9560238)
(PMID:23603115)		 InterPro
MGI
TreeGrafter
Ensembl		 PMID:8674118 PMID:9500552 PMID:9560238 PMID:10096563 PMID:10359802 More... GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MLH3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16204034) Ensembl
MGI
TreeGrafter
InterPro		 PMID:16204034 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:48,123,263...48,153,989
Ensembl chr 8:48,124,105...48,154,102 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11555625)
(PMID:9157971), (PMID:9244348)
(PMID:10581038), (PMID:17331550), (PMID:23071719), (PMID:7628020), (PMID:9697842)
(PMID:14744764)
(PMID:10992298)
(PMID:10874005), (PMID:11046134), (PMID:11890935), (PMID:16728433), (PMID:8706033), (PMID:9288110)
(PMID:16728433)
(PMID:12531017)
(PMID:23603115)		 MGI
TreeGrafter
InterPro
Ensembl
UniProt		 PMID:7628020 PMID:8706033 PMID:9157971 PMID:9244348 PMID:9288110 More... GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16728433)
(PMID:11691815)
(PMID:10706084), (PMID:16728433)		 Ensembl
MGI
TreeGrafter
InterPro		 PMID:10706084 PMID:11691815 PMID:16728433 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G MSH4 mutS homolog 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:70,745,777...70,822,507
Ensembl chr 6:70,746,634...70,823,004 		JBrowse link
G MSH5 mutS homolog 5 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr12:1,221,278...1,243,042 JBrowse link
G MSH6 mutS homolog 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11691815)
(PMID:16728433)
(PMID:23071719)
(PMID:15324697)
(PMID:12370835), (PMID:16728433), (PMID:9390556)
(PMID:23603115)		 RGD
MGI
TreeGrafter
Ensembl
InterPro		 PMID:9390556 PMID:11691815 PMID:12370835 PMID:15324697 PMID:16728433 More... GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2292505 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:15,018,345...15,026,539
Ensembl chr15:14,906,543...15,026,539 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9500552) Ensembl
MGI
TreeGrafter
InterPro		 PMID:9500552 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr37:502,752...609,640
Ensembl chr37:502,747...790,904 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11313994)
(PMID:16204034)
(PMID:10359802), (PMID:10429667), (PMID:16204034), (PMID:16728433), (PMID:23071719), (PMID:9500552)		 InterPro
MGI
TreeGrafter
Ensembl		 PMID:9500552 PMID:10359802 PMID:10429667 PMID:11313994 PMID:16204034 More... GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:11,352,150...11,410,937
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G RNASEH2A ribonuclease H2 subunit A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23603115) MGI
TreeGrafter		 PMID:23603115 GO_REF:0000118 NCBI chr20:49,345,258...49,352,944
Ensembl chr20:49,345,266...49,355,167 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA TreeGrafter GO_REF:0000118
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,746,637...58,862,550
Ensembl chr 1:58,767,159...58,859,282 		JBrowse link
mitochondrial DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042 		JBrowse link
mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:30705315) MGI PMID:30705315 NCBI chr38:2,878,677...2,956,226 JBrowse link
G MTNAP1 mitochondrial nucleoid associated protein 1 involved_in ISO (MGI:7564184|PMID:37676315) UniProt PMID:37676315 MGI:7564184 NCBI chr 9:6,937,549...6,948,439
Ensembl chr 9:6,937,588...6,947,403 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25378300) MGI
Ensembl		 PMID:25378300 GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23197651) Ensembl
MGI		 PMID:23197651 GO_REF:0000107 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22958918) Ensembl
MGI		 PMID:22958918 GO_REF:0000107 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492 		JBrowse link
G TK2 thymidine kinase 2 acts_upstream_of_or_within ISO (PMID:18467430) MGI PMID:18467430 NCBI chr 5:82,730,514...82,758,153
Ensembl chr 5:82,729,150...82,756,457 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,262,820...41,290,101
Ensembl chr 5:41,263,017...41,290,100 		JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (PMID:24101517) MGI PMID:24101517 NCBI chr20:4,268,670...4,281,624
Ensembl chr20:4,267,683...4,281,549 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G LIG3 DNA ligase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:21390132)
(PMID:21390131), (PMID:21390132)		 BHF-UCL
MGI		 PMID:21390131 PMID:21390132 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr24:5,068,147...5,083,941 JBrowse link
G NEURL4 neuralized E3 ubiquitin protein ligase 4 acts_upstream_of_or_within ISO (PMID:35157000) MGI PMID:35157000 NCBI chr 5:32,276,032...32,287,432
Ensembl chr 5:32,276,079...32,287,288 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25378300) MGI
Ensembl		 PMID:25378300 GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24101517) Ensembl
MGI		 PMID:24101517 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16327803) Ensembl
MGI		 PMID:16327803 GO_REF:0000107 NCBI chr 6:36,921,941...36,967,718
Ensembl chr 6:36,917,858...36,967,689 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:5,068,147...5,083,941 JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15888483) Ensembl
MGI
TreeGrafter
InterPro		 PMID:15888483 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:52,357,062...52,373,768
Ensembl chr 3:52,357,068...52,421,544 		JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23197651) Ensembl
MGI
TreeGrafter		 PMID:23197651 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G RNASEH1 ribonuclease H1 acts_upstream_of_or_within ISO (PMID:12667461) MGI PMID:12667461 NCBI chr17:2,117,446...2,127,893
Ensembl chr17:2,117,446...2,127,893 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17486094) Ensembl
MGI		 PMID:17486094 GO_REF:0000107 NCBI chr13:3,774,725...3,838,576
Ensembl chr13:3,799,025...3,837,934 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G TEFM transcription elongation factor, mitochondrial NOT|involved_in ISO (PMID:21278163) UniProt PMID:21278163 NCBI chr 9:40,860,850...40,868,020
Ensembl chr 9:40,860,938...40,868,020 		JBrowse link
G TK2 thymidine kinase 2 acts_upstream_of_or_within ISO (PMID:18434326) MGI PMID:18434326 NCBI chr 5:82,730,514...82,758,153
Ensembl chr 5:82,729,150...82,756,457 		JBrowse link
G TWNK twinkle mtDNA helicase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr28:13,672,772...13,680,732
Ensembl chr28:13,676,304...13,680,044 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM6 minichromosome maintenance complex component 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
mitotic DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS3 GINS complex subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:58,233,425...58,244,429
Ensembl chr 2:58,234,321...58,245,219 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:1,682,928...1,702,689
Ensembl chr20:1,682,886...1,702,366 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:19,924,017...19,945,576
Ensembl chr12:19,920,210...19,945,605 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
mitotic DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:29,707,523...29,738,599
Ensembl chr26:29,707,564...29,739,252 		JBrowse link
mitotic DNA replication termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTF2 replication termination factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr24:41,665,259...41,706,348
Ensembl chr24:41,665,294...41,706,348 		JBrowse link
mitotic DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RECQL5 RecQ like helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of ISO (PMID:17210642)
(PMID:11101838)
(PMID:9808625)		 MGI PMID:9808625 PMID:11101838 PMID:17210642 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G LOC483061 DNA excision repair protein ERCC-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:36,535,679...36,536,408 JBrowse link
G MSH2 mutS homolog 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G RAD51 RAD51 recombinase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA2 BRCA2 DNA repair associated involved_in ISO (PMID:21076401) BHF-UCL PMID:21076401 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA InterPro GO_REF:0000002 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5522574|PMID:24115439) BHF-UCL PMID:24115439 MGI:5522574 NCBI chr24:47,219,977...47,248,791 JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15572351)
(PMID:10601318), (PMID:14663139)		 MGI
Ensembl		 PMID:10601318 PMID:14663139 PMID:15572351 GO_REF:0000107 NCBI chr 2:85,364,819...85,372,473
Ensembl chr 2:85,364,851...85,373,772 		JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:58,340,183...58,355,353
Ensembl chr 5:58,339,634...58,354,326 		JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chr 5:63,122,379...63,152,078
Ensembl chr 5:63,122,498...63,151,661 		JBrowse link
G PAM16 presequence translocase associated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chr 6:37,040,484...37,047,708 JBrowse link
negative regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr34:19,398,310...19,410,519
Ensembl chr34:19,354,825...19,409,844 		JBrowse link
G AHR aryl hydrocarbon receptor ISO RGD PMID:12193573 RGD:625678 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444 		JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:5,569,120...5,578,393
Ensembl chr28:5,569,501...5,601,956 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:11595739) UniProt PMID:11595739 NCBI chr12:5,746,898...5,755,103
Ensembl chr12:5,745,852...5,892,281 		JBrowse link
G CHEK1 checkpoint kinase 1 ISO RGD PMID:12429946 RGD:2316115 NCBI chr 5:8,878,511...8,910,626
Ensembl chr 5:8,879,147...8,907,669 		JBrowse link
G DACH1 dachshund family transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:25,690,700...25,934,449
Ensembl chr22:25,726,597...25,934,550 		JBrowse link
G DNAJC2 DnaJ heat shock protein family (Hsp40) member C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7559602) Ensembl
MGI		 PMID:7559602 GO_REF:0000107 NCBI chr18:16,866,795...16,894,143
Ensembl chr18:16,887,901...16,893,857 		JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:10446064 RGD:7771571 NCBI chr 4:39,588,833...39,591,065
Ensembl chr 4:39,588,339...39,590,514 		JBrowse link
G GJA1 gap junction protein alpha 1 ISO RGD PMID:14702389 RGD:8662403 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936 		JBrowse link
G KCNK2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:23271285 RGD:9831181 NCBI chr 7:12,893,654...13,092,319
Ensembl chr 7:12,894,149...13,090,110 		JBrowse link
G NIBAN2 niban apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,802,010...55,853,960
Ensembl chr 9:55,802,014...55,852,540 		JBrowse link
G NPPC natriuretic peptide C ISO RGD PMID:12746286 RGD:1580115 NCBI chr25:43,714,545...43,718,969
Ensembl chr25:43,717,939...43,718,996 		JBrowse link
G RGN regucalcin ISO RGD PMID:11500948 RGD:9590199 NCBI chr  X:40,697,292...40,715,491
Ensembl chr  X:40,698,768...40,715,490 		JBrowse link
G TP53 tumor protein p53 ISO RGD PMID:11502571 RGD:70312 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGN regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chr  X:40,697,292...40,715,491
Ensembl chr  X:40,698,768...40,715,490 		JBrowse link
negative regulation of DNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPPA3 developmental pluripotency associated 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:37,114,192...37,196,434 JBrowse link
G FAM156A family with sequence similarity 156 member A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:44,702,675...44,825,693 JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15087456) Ensembl
MGI		 PMID:15087456 GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G LOC119878969 protein FAM156A/FAM156B-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119879445 protein FAM156A/FAM156B-like involved_in IEA TreeGrafter GO_REF:0000118
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22442485) Ensembl
MGI		 PMID:22442485 GO_REF:0000107 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146 		JBrowse link
negative regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO5 F-box protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:43,138,338...43,149,546
Ensembl chr 1:43,138,889...43,149,297 		JBrowse link
negative regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUB1 SUB1 regulator of transcription involved_in ISO (PMID:28369605) CACAO PMID:28369605 NCBI chr 4:74,931,105...74,951,707
Ensembl chr 4:74,933,620...74,951,573 		JBrowse link
negative regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G H1-0 H1.0 linker histone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:26,827,748...26,829,909
Ensembl chr10:26,829,089...26,829,673 		JBrowse link
G H1-1 H1.1 linker histone, cluster member involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:23,973,893...23,974,739 JBrowse link
G H1-10 H1.10 linker histone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:2,799,360...2,800,524 JBrowse link
G H1-2 H1.2 linker histone, cluster member involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:24,009,304...24,011,602 JBrowse link
G H1-3 H1.3 linker histone, cluster member involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:24,155,864...24,156,647 JBrowse link
G H1-4 H1.4 linker histone, cluster member involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:24,091,950...24,092,694 JBrowse link
G H1-6 H1.6 linker histone, cluster member involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:24,046,374...24,065,892
Ensembl chr35:24,044,188...24,047,810 		JBrowse link
G H1-8 H1.8 linker histone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,614,822...5,619,136
Ensembl chr20:5,617,001...5,624,352 		JBrowse link
G H2BC25 H2B clustered histone 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:24,144,778...24,155,922 JBrowse link
G LIG3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:16648486) MGI PMID:16648486 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LOC119867686 histone H1.4-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119867744 histone H1.2-like involved_in IEA TreeGrafter GO_REF:0000118
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10545954), (PMID:7628020) Ensembl
MGI		 PMID:7628020 PMID:10545954 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10545954) Ensembl
MGI		 PMID:10545954 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:12509447) MGI PMID:12509447 NCBI chr20:9,163,322...9,271,224
Ensembl chr20:9,163,428...9,263,730 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:47,219,977...47,248,791 JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
negative regulation of DNA recombination at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CGAS cyclic GMP-AMP synthase involved_in ISO (PMID:35210392) UniProt PMID:35210392 NCBI chr12:35,511,920...35,528,759
Ensembl chr12:35,512,860...35,528,596 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:17049931) UniProt PMID:17049931 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034 		JBrowse link
negative regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,887,093...1,894,728
Ensembl chr 9:1,887,201...1,897,473 		JBrowse link
G GMNC geminin coiled-coil domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr34:22,790,364...22,800,569
Ensembl chr34:22,790,972...22,800,852 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
G GTPBP4 GTP binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:33,936,629...33,955,947
Ensembl chr 2:33,936,637...34,024,769 		JBrowse link
G HCRT hypocretin neuropeptide precursor ISO in seminiferous tubules at epithelial cycle stage V RGD PMID:16141395 RGD:1600965 NCBI chr 9:20,729,616...20,732,074
Ensembl chr 9:20,730,779...20,732,028 		JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:18191612 RGD:2316772 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G INPPL1 inositol polyphosphate phosphatase like 1 ISO RGD PMID:12933696 RGD:1626126 NCBI chr21:25,900,308...25,914,527
Ensembl chr21:25,900,900...25,915,577 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 ISO RGD PMID:9891064 RGD:632686 NCBI chr13:37,317,061...37,322,792
Ensembl chr13:37,316,424...37,322,792 		JBrowse link
G MCIDAS multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:42,577,028...42,583,120
Ensembl chr 2:42,577,039...42,583,011 		JBrowse link
G PDS5A PDS5 cohesin associated factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,521,839...72,673,164
Ensembl chr 3:72,521,868...72,673,164 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:54,407,184...54,437,676
Ensembl chr 2:54,407,228...54,437,632 		JBrowse link
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884608) Ensembl
MGI		 PMID:11884608 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TSPYL2 TSPY like 2 involved_in ISO (PMID:11395479) UniProt PMID:11395479 NCBI chr  X:45,001,112...45,008,023
Ensembl chr  X:45,001,100...45,007,869 		JBrowse link
G WAPL WAPL cohesin release factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,219,644...34,297,456
Ensembl chr 4:34,219,645...34,302,839 		JBrowse link
negative regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLL1 dynein light chain LC8-type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,369,878...16,402,302
Ensembl chr26:16,398,886...16,402,021
Ensembl chr26:16,398,886...16,402,021 		JBrowse link
negative regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:19906994) ComplexPortal PMID:19906994 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR221 microRNA mir-221 involved_in ISO (PMID:24147153) BHF-UCL PMID:24147153 NCBI chr  X:39,523,890...39,523,951
Ensembl chr  X:39,523,885...39,523,954 		JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:40,225,531...40,226,507
Ensembl chr 3:40,225,474...40,226,612
Ensembl chr18:40,225,474...40,226,612 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,574,478...23,655,305
Ensembl chr21:23,579,370...23,655,290 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307 		JBrowse link
G C1QBP complement C1q binding protein involved_in ISO (PMID:31353207) UniProt PMID:31353207 NCBI chr 5:31,354,665...31,359,672
Ensembl chr 5:31,354,723...31,359,469 		JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:35,511,920...35,528,759
Ensembl chr12:35,512,860...35,528,596 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:28512243) UniProt PMID:28512243 NCBI chr24:20,333,593...20,390,341 JBrowse link
G FANCB FA complementation group B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) TreeGrafter
MGI		 PMID:25520194 GO_REF:0000118 NCBI chr  X:10,690,826...11,140,838
Ensembl chr  X:11,095,200...11,141,029 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G HELB DNA helicase B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G KLHL15 kelch like family member 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:19,617,629...19,651,076
Ensembl chr  X:19,618,569...19,650,728 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G MAGEF1 MAGE family member F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,543,381...17,545,089
Ensembl chr34:17,543,906...17,544,868 		JBrowse link
G PARPBP PARP1 binding protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:40,972,098...41,039,044
Ensembl chr15:40,976,598...41,036,068 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:22,165,338...22,176,847
Ensembl chr 6:22,165,338...22,176,441 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G RADX RPA1 related single stranded DNA binding protein, X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:80,146,335...80,234,732
Ensembl chr  X:80,146,040...80,235,739 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) Ensembl
MGI		 PMID:25520194 GO_REF:0000107 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,440,493...31,445,318
Ensembl chr 6:31,441,517...31,445,310 		JBrowse link
G SENP3 SUMO specific peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,485,738...32,493,225
Ensembl chr 5:32,484,572...32,500,805 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:15,957,863...16,037,336
Ensembl chr24:15,957,852...16,038,008 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr 4:34,665,111...34,740,645
Ensembl chr 4:34,688,245...34,763,705 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IEA TreeGrafter GO_REF:0000118
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,359,286...69,505,067
Ensembl chr 7:69,358,447...69,621,067 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,764,209...41,778,457
Ensembl chr 7:41,764,253...41,777,002 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUNIP aurora kinase A and ninein interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,097,435...74,116,824
Ensembl chr 2:74,097,508...74,118,085 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr16:12,994,508...13,003,632
Ensembl chr16:12,994,479...12,998,435 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,724,741...37,745,259
Ensembl chr13:37,724,759...37,745,252 		JBrowse link
G LOC119876110 aurora kinase A and ninein-interacting protein-like involved_in IEA Ensembl GO_REF:0000107
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NUDT16L1 nudix hydrolase 16 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,711,351...36,713,931
Ensembl chr 6:36,711,671...36,713,896
Ensembl chr 6:36,711,671...36,713,896 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19506022) MGI
Ensembl		 PMID:19506022 GO_REF:0000107 NCBI chr20:8,486,150...8,491,448
Ensembl chr20:8,480,005...8,491,264 		JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16275384) Ensembl
MGI		 PMID:16275384 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758 		JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17137798) Ensembl
MGI		 PMID:17137798 GO_REF:0000107 NCBI chr 2:36,978,148...37,065,247
Ensembl chr 2:36,961,024...37,064,303 		JBrowse link
G RTP2 receptor transporter protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428 		JBrowse link
negative regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 ISO RGD PMID:23800874 RGD:11557986 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
negative regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in ISO (MGI:5800654|PMID:27010503) UniProt PMID:27010503 MGI:5800654 NCBI chr20:45,461,135...45,465,922
Ensembl chr20:45,461,676...45,465,417 		JBrowse link
G BLM BLM RecQ like helicase involved_in
acts_upstream_of_or_within		 ISO (MGI:5800654|PMID:27010503)
(PMID:11101838)
(PMID:17210642)
(PMID:16914751), (PMID:9808625)		 UniProt
MGI		 PMID:9808625 PMID:11101838 PMID:16914751 PMID:17210642 PMID:27010503 MGI:5800654 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15480418) Ensembl
MGI		 PMID:15480418 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in ISO (MGI:3758502|PMID:14690602) BHF-UCL PMID:14690602 MGI:3758502 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
negative regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:47,219,977...47,248,791 JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
negative regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:16556873 RGD:1580657 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
negative regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G SMG6 SMG6 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,162,991...46,405,856
Ensembl chr 9:46,164,492...46,405,748 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
negative regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 acts_upstream_of_or_within ISO (PMID:12676566) MGI PMID:12676566 NCBI chr 8:4,221,183...4,223,863
Ensembl chr 8:4,221,269...4,223,512 		JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chr24:47,219,977...47,248,791 JBrowse link
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142 		JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr 4:35,256,772...35,298,974
Ensembl chr 4:35,256,970...35,299,021 		JBrowse link
G EXOSC10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130 		JBrowse link
G GNL3L G protein nucleolar 3 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,270,162...46,296,972
Ensembl chr  X:46,189,870...46,296,966 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754 		JBrowse link
G LOC475399 heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:18082603) BHF-UCL PMID:18082603 NCBI chr15:18,239,810...18,299,065 JBrowse link
G NAT10 N-acetyltransferase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:33,654,701...33,692,642
Ensembl chr18:33,655,311...33,689,923 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr30:29,223,507...29,232,584
Ensembl chr30:29,157,119...29,232,043 		JBrowse link
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 involved_in ISO (PMID:21119197)
(PMID:11701125)		 BHF-UCL PMID:11701125 PMID:21119197 NCBI chr25:27,090,244...27,182,377
Ensembl chr25:27,021,704...27,181,968 		JBrowse link
G PML PML nuclear body scaffold involved_in ISO (PMID:19567472) UniProt PMID:19567472 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077 		JBrowse link
G STN1 STN1 subunit of CST complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G TEN1 TEN1 subunit of CST complex involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:4,635,192...4,658,455
Ensembl chr 9:4,635,354...4,658,252 		JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr 2:65,068,088...65,147,853
Ensembl chr 2:65,071,111...65,147,896 		JBrowse link
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,221,183...4,223,863
Ensembl chr 8:4,221,269...4,223,512 		JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TSR2 TSR2 ribosome maturation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,189,810...46,194,949
Ensembl chr  X:46,189,870...46,296,966 		JBrowse link
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G MCRS1 microspherule protein 1 involved_in ISO (PMID:15044100) BHF-UCL PMID:15044100 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:5705431|PMID:26586427) BHF-UCL PMID:26586427 MGI:5705431 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (PMID:24012755) BHF-UCL PMID:24012755 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TNKS tankyrase involved_in ISO (PMID:25939383) BHF-UCL PMID:25939383 NCBI chr16:34,826,248...35,040,004
Ensembl chr16:34,831,662...35,039,946 		JBrowse link
G TNKS2 tankyrase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:6,286,125...6,354,284
Ensembl chr28:6,285,690...6,352,317 		JBrowse link
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
non-replicative DNA transposition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGBD5 piggyBac transposable element derived 5 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:8,989,542...9,025,836
Ensembl chr 4:8,989,430...9,046,954 		JBrowse link
nuclear DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr31:28,192,338...28,209,512 JBrowse link
G ZNF830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21191184) Ensembl
MGI
TreeGrafter		 PMID:21191184 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,382,508...38,384,060
Ensembl chr 9:38,382,900...38,384,015 		JBrowse link
nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA2 BRCA2 DNA repair associated involved_in ISO (PMID:16845393) UniProt PMID:16845393 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788 		JBrowse link
G CETN1 centrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:67,431,020...67,431,774
Ensembl chr 7:67,431,081...67,431,599 		JBrowse link
G CETN2 centrin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:120,714,676...120,720,012 JBrowse link
G COMMD1 copper metabolism domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:61,886,281...62,059,610
Ensembl chr10:61,886,281...62,059,591 		JBrowse link
G DCLRE1A DNA cross-link repair 1A acts_upstream_of_or_within ISO (PMID:10848582) MGI PMID:10848582 NCBI chr28:24,704,044...24,724,561
Ensembl chr28:24,669,733...24,723,841 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,354,201...42,378,463
Ensembl chr18:42,354,572...42,377,947 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:3290851)
(PMID:8275084)		 MGI
Ensembl		 PMID:3290851 PMID:8275084 GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11950998), (PMID:9651581) InterPro
MGI
Ensembl		 PMID:9651581 PMID:11950998 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:23,310,911...23,344,083
Ensembl chr19:23,310,986...23,337,683 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10644440) MGI
Ensembl		 PMID:10644440 GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10022922) InterPro
MGI		 PMID:10022922 GO_REF:0000002 NCBI chr22:52,339,011...52,372,618 JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603016)
(PMID:20603015), (PMID:25430771)		 UniProt PMID:20603015 PMID:20603016 PMID:25430771 NCBI chr 3:38,013,744...38,053,096
Ensembl chr 3:38,013,739...38,052,202 		JBrowse link
G FANCC FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8704201) Ensembl
MGI
TreeGrafter		 PMID:8704201 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:71,388,931...71,678,019
Ensembl chr 1:71,487,601...71,678,506 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:40,770,661...40,807,329
Ensembl chr21:40,770,983...40,806,556 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr26:5,985,094...6,011,253
Ensembl chr26:5,985,798...6,011,163 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:675,960...681,504
Ensembl chr12:675,983...681,425 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
G GTF2H5 general transcription factor IIH subunit 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23637614) MGI
InterPro
Ensembl		 PMID:23637614 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:47,669,196...47,681,370
Ensembl chr 1:47,669,248...47,681,368 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:93,596...104,908
Ensembl chr16:93,626...125,597 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G LOC119865601 checkpoint protein HUS1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119877459 checkpoint protein HUS1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC478089 general transcription factor IIH subunit 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 2:54,553,871...54,579,695
Ensembl chr 2:54,554,578...54,628,670 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:35,747,883...35,946,353
Ensembl chr 8:35,756,933...35,946,353 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,899,144...38,904,637
Ensembl chr 6:38,899,126...38,905,622 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19506022) InterPro
MGI
Ensembl		 PMID:19506022 GO_REF:0000002 GO_REF:0000107 NCBI chr20:8,486,150...8,491,448
Ensembl chr20:8,480,005...8,491,264 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1508673) UniProt PMID:1508673 NCBI chr  X:20,227,808...20,537,893
Ensembl chr  X:20,227,886...20,537,902 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,193,065...14,201,312
Ensembl chr28:14,193,067...14,201,334 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr20:49,244,330...49,250,058
Ensembl chr20:49,241,358...49,250,039 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr11:62,732,989...62,778,957
Ensembl chr11:62,732,984...62,775,978 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RPA3 involved_in IEA TreeGrafter GO_REF:0000118
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G TP53 tumor protein p53 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11950998), (PMID:12509265) InterPro
MGI
Ensembl		 PMID:11950998 PMID:12509265 GO_REF:0000002 GO_REF:0000107 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9067411)
(PMID:17049932), (PMID:19615386)
(PMID:12815074)		 InterPro
MGI
TreeGrafter
Ensembl		 PMID:9067411 PMID:12815074 PMID:17049932 PMID:19615386 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
nucleotide-excision repair involved in interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
nucleotide-excision repair, DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,310,911...23,344,083
Ensembl chr19:23,310,986...23,337,683 		JBrowse link
nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G POLB DNA polymerase beta NOT|involved_in ISO (PMID:20227374) UniProt PMID:20227374 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:106,302,583...106,331,353
Ensembl chr 1:106,302,574...106,331,385 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:23,753,918...23,805,306
Ensembl chr21:23,754,278...23,802,104 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:433,990...481,018
Ensembl chr26:433,879...479,917 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:30,793,893...30,860,240
Ensembl chr 3:30,712,571...30,859,106 		JBrowse link
nucleotide-excision repair, preincision complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2H5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637614) Ensembl
MGI
TreeGrafter		 PMID:23637614 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:47,669,196...47,681,370
Ensembl chr 1:47,669,248...47,681,368 		JBrowse link
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRY2 cryptochrome circadian regulator 2 NOT|involved_in ISO (PMID:12627958) UniProt PMID:12627958 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875 		JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464 		JBrowse link
G ENDOG endonuclease G ISO RGD PMID:16407272 RGD:9685355 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042 		JBrowse link
G GATA5 GATA binding protein 5 ISO RGD PMID:25726415 RGD:155260369 NCBI chr24:46,417,404...46,427,617
Ensembl chr24:46,417,391...46,429,858 		JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chr13:37,724,741...37,745,259
Ensembl chr13:37,724,759...37,745,252 		JBrowse link
G IGFBP3 insulin like growth factor binding protein 3 ISO RGD PMID:15125883 RGD:10402776 NCBI chr16:1,021,855...1,027,604
Ensembl chr16:1,021,972...1,026,392 		JBrowse link
G IL6 interleukin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM168A family with sequence similarity 168 member A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:24,644,700...24,832,307
Ensembl chr21:24,768,108...24,827,784 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:18973764) UniProt PMID:18973764 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034 		JBrowse link
positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB2 arrestin beta 2 ISO RGD PMID:19254952 RGD:5509898 NCBI chr 5:31,831,208...31,838,875
Ensembl chr 5:31,829,864...31,839,454 		JBrowse link
G C3AR1 complement C3a receptor 1 ISO RGD PMID:23713944 RGD:7411623 NCBI chr27:37,431,745...37,439,858
Ensembl chr27:37,433,792...37,435,246 		JBrowse link
G CAMK2D calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:17267544 RGD:2303063 NCBI chr32:33,223,093...33,525,783
Ensembl chr32:33,224,716...33,525,371 		JBrowse link
G CCNA2 cyclin A2 ISO RGD PMID:18667424 RGD:10054494 NCBI chr19:18,317,866...18,324,592
Ensembl chr19:18,318,004...18,323,691 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16005543 RGD:5131269 NCBI chr14:43,366,849...43,414,398
Ensembl chr14:43,368,340...43,415,142 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 ISO RGD PMID:20439821 RGD:7829726 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554 		JBrowse link
G DDX39B DExD-box helicase 39B ISO RGD PMID:22446327 RGD:10401140 NCBI chr12:1,032,377...1,044,465
Ensembl chr12:1,032,368...1,044,492 		JBrowse link
G EGF epidermal growth factor ISO RGD PMID:3093142 RGD:10395243 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:16774925) UniProt PMID:16774925 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,243,689...36,254,636
Ensembl chr 4:36,244,220...36,252,035 		JBrowse link
G GFER growth factor, augmenter of liver regeneration ISO RGD PMID:16937468 RGD:9685728 NCBI chr 6:38,948,927...38,951,300
Ensembl chr 6:38,949,484...38,951,703 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:12721208 RGD:10045365 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G HGF hepatocyte growth factor involved_in ISO (PMID:2531289) UniProt PMID:2531289 NCBI chr18:21,329,688...21,410,257
Ensembl chr18:21,332,817...21,410,263 		JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO RGD PMID:18358471 RGD:401938603 NCBI chr22:4,453,715...4,510,934
Ensembl chr22:4,453,715...4,511,037 		JBrowse link
G NFATC1 nuclear factor of activated T cells 1 ISO RGD PMID:18667424 RGD:10054494 NCBI chr 1:1,027,021...1,121,362
Ensembl chr 1:1,028,695...1,121,588 		JBrowse link
G NOX4 NADPH oxidase 4 involved_in ISO (MGI:5009390|PMID:17942966) UniProt PMID:17942966 MGI:5009390 NCBI chr21:10,615,153...10,782,927
Ensembl chr21:10,615,970...10,775,277 		JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 ISO RGD PMID:12890786 RGD:7775030 NCBI chr  X:84,074,146...84,335,699
Ensembl chr  X:84,074,001...84,329,951 		JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (MGI:5284758|PMID:19019919) UniProt PMID:19019919 MGI:5284758 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283 		JBrowse link
G PRKD2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,206,400...109,241,529
Ensembl chr 1:109,207,067...109,330,007 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta ISO RGD PMID:21451101 RGD:10041071 NCBI chr25:30,137,546...30,264,221
Ensembl chr25:30,138,209...30,264,133 		JBrowse link
G RGCC regulator of cell cycle involved_in ISO PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chr22:9,199,204...9,209,297 JBrowse link
G SMOC2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:55,826,354...55,986,053
Ensembl chr 1:55,825,666...55,986,052 		JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:9395232 RGD:14696805 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISO (PMID:16774925) UniProt PMID:16774925 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
positive regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO RGD PMID:27895165 RGD:12879393 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
positive regulation of DNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STPG4 sperm-tail PG-rich repeat containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:49,255,715...49,294,752
Ensembl chr10:49,255,723...49,294,708 		JBrowse link
positive regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2F7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,856,093...19,895,657
Ensembl chr15:19,857,227...19,895,225 		JBrowse link
G E2F8 E2F transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:41,340,410...41,358,261
Ensembl chr21:41,340,969...41,357,206 		JBrowse link
positive regulation of DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21211721) MGI
Ensembl		 PMID:21211721 GO_REF:0000107 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21211721) MGI
Ensembl		 PMID:21211721 GO_REF:0000107 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
positive regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA3 annexin A3 ISO RGD PMID:15744063 RGD:2316072 NCBI chr32:3,006,000...3,049,321
Ensembl chr32:3,005,788...3,049,049 		JBrowse link
G HMGB2 high mobility group box 2 ISO RGD PMID:8432381 RGD:2316096 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:19507001 RGD:2311507 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387 		JBrowse link
G NPM1 nucleophosmin 1 ISO RGD PMID:11481036 RGD:1600909 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G NPM2 nucleophosmin/nucleoplasmin 2 ISO lesser effect than Npm1 RGD PMID:11481036 RGD:1600909 NCBI chr25:35,204,905...35,226,226 JBrowse link
G OGA O-GlcNAcase ISO RGD PMID:19139380 RGD:2305938 NCBI chr28:14,376,824...14,405,409
Ensembl chr28:14,373,452...14,404,541 		JBrowse link
G PFN1 profilin 1 ISO RGD PMID:10966486 RGD:2324858 NCBI chr 5:31,670,483...31,671,891
Ensembl chr 5:31,670,194...31,671,895 		JBrowse link
positive regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZCWPW1 zinc finger CW-type and PWWP domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:9,239,626...9,314,972
Ensembl chr 6:9,246,264...9,271,330 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:7,298,789...7,316,665
Ensembl chr32:7,298,790...7,317,001 		JBrowse link
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO (MGI:3698695|PMID:17121854) UniProt PMID:17121854 MGI:3698695 NCBI chr21:29,719,386...29,741,658
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:45,466,808...45,474,953
Ensembl chr20:45,466,805...45,473,009 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr17:21,886,127...22,288,513
Ensembl chr17:21,889,862...22,288,504 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA UniProt GO_REF:0000104 NCBI chr  X:123,081,262...123,143,509
Ensembl chr  X:123,081,050...123,140,133 		JBrowse link
G CBX8 chromobox 8 ISO RGD PMID:23572236 RGD:9586727 NCBI chr 9:1,839,701...1,842,355
Ensembl chr 9:1,839,096...1,843,099 		JBrowse link
G CCDC117 coiled-coil domain containing 117 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:22,145,773...22,158,835
Ensembl chr26:22,145,775...22,156,449 		JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:118,777,110...118,784,397
Ensembl chr 1:118,778,224...118,778,667 		JBrowse link
G CMTR1 cap methyltransferase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr12:6,454,605...6,505,127
Ensembl chr12:6,454,652...6,504,776 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G EGFR epidermal growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) UniProt PMID:7664335 NCBI chr 2:47,502,777...47,559,012
Ensembl chr 2:47,503,762...47,558,889 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:34,126,086...34,308,412
Ensembl chr24:34,082,197...34,308,423 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:72,313,412...72,417,729
Ensembl chr 2:72,328,362...72,414,058 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:26,208,514...26,514,601
Ensembl chr 1:26,272,448...26,514,201 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr17:48,674,004...48,676,869 JBrowse link
G INO80C INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:54,569,954...54,586,902
Ensembl chr 7:54,569,972...54,586,782 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,581,531...14,647,930
Ensembl chr37:14,591,055...14,647,936 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,033,366...18,041,604
Ensembl chr 6:18,033,363...18,041,308 		JBrowse link
G LOC610150 lys-63-specific deubiquitinase BRCC36-like involved_in IEA UniProt GO_REF:0000104 NCBI chr32:24,754,628...24,755,868 JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO RGD PMID:1945835 RGD:729332 NCBI chr28:38,204,611...38,427,482
Ensembl chr28:38,204,610...38,427,380 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:4,944,278...4,982,377
Ensembl chr 5:4,946,893...4,980,996 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase ISO RGD PMID:15158362 RGD:2316739 NCBI chr28:1,651,698...1,767,210
Ensembl chr28:1,652,670...1,766,895 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA UniProt GO_REF:0000104 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:23911537) UniProt PMID:23911537 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:19934257) UniProt PMID:19934257 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,359,286...69,505,067
Ensembl chr 7:69,358,447...69,621,067 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,090,723...103,098,601
Ensembl chr 1:102,989,360...103,098,573 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:40,521,751...40,549,304
Ensembl chr27:40,523,314...40,549,332 		JBrowse link
G TMEM161A transmembrane protein 161A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,021,722...44,037,985
Ensembl chr20:44,020,919...44,037,938 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) HGNC-UCL PMID:16129784 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:36,339,711...36,467,035
Ensembl chr 4:36,354,922...36,466,880 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,574,153...32,586,222
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
positive regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629 		JBrowse link
G ATF1 activating transcription factor 1 ISO RGD PMID:11925444 RGD:625519 NCBI chr27:3,904,635...3,993,387
Ensembl chr27:3,877,355...3,992,904 		JBrowse link
G BAZ1A bromodomain adjacent to zinc finger domain 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:13,604,694...13,694,508
Ensembl chr 8:13,605,182...13,693,847 		JBrowse link
G BRPF3 bromodomain and PHD finger containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,315,228...5,346,328
Ensembl chr12:5,310,617...5,350,055 		JBrowse link
G CACYBP calcyclin binding protein ISO mRNA:increased expression:heart RGD PMID:16440310 RGD:2326117 NCBI chr 7:24,372,599...24,384,084
Ensembl chr 7:24,372,596...24,383,926 		JBrowse link
G CDK1 cyclin dependent kinase 1 ISO RGD PMID:19821535 RGD:2316313 NCBI chr 4:12,884,106...12,899,203
Ensembl chr 4:12,883,385...12,899,197 		JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:26842564) UniProt PMID:26842564 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G EGFR epidermal growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631 		JBrowse link
G EREG epiregulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,857,325...62,877,831
Ensembl chr13:62,856,709...62,877,760 		JBrowse link
G FAF1 Fas associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:10,232,520...10,691,106
Ensembl chr15:10,232,614...10,690,741 		JBrowse link
G GLI1 GLI family zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in ISO (PMID:12165851) UniProt PMID:12165851 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G HRAS HRas proto-oncogene, GTPase ISO RGD PMID:9487126 RGD:2293350 NCBI chr18:25,642,844...25,644,717
Ensembl chr18:25,642,844...25,644,717 		JBrowse link
G IL6 interleukin 6 ISO RGD PMID:15828022 RGD:2306943 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519 		JBrowse link
G INS insulin involved_in ISO (PMID:7513704) BHF-UCL PMID:7513704 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:9487126 RGD:2293350 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,841,916...25,875,245
Ensembl chr 9:25,842,054...25,873,674 		JBrowse link
G KCTD13 potassium channel tetramerization domain containing 13 ISO RGD PMID:15726626 RGD:1357162 NCBI chr 6:17,945,541...17,959,421
Ensembl chr 6:17,946,062...17,959,232 		JBrowse link
G LOC403934 cell division cycle 42 ISO RGD PMID:9487126 RGD:2293350 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211 		JBrowse link
G LOC607874 cystatin-C-like ISO In rat mesangial cells RGD PMID:1540157 RGD:2306501 NCBI chr23:49,562...53,618 JBrowse link
G LPIN1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chr17:8,348,860...8,480,447
Ensembl chr17:8,348,886...8,478,863 		JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 ISO RGD PMID:9487126 RGD:2293350 NCBI chr 5:36,142,610...36,243,673
Ensembl chr 5:36,118,388...36,241,296 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:9487126 RGD:2293350 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401 		JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chr 1:49,090,041...49,105,244
Ensembl chr 1:49,090,041...49,105,244 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:17427161 RGD:2317489 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027 		JBrowse link
G NPM1 nucleophosmin 1 ISO RGD PMID:11481036 RGD:1600909 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G NPM2 nucleophosmin/nucleoplasmin 2 involved_in ISO
IEA		 lesser effect than Npm1 RGD
TreeGrafter		 PMID:11481036 GO_REF:0000118 RGD:1600909 NCBI chr25:35,204,905...35,226,226 JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G PDGFB platelet derived growth factor subunit B ISO RGD PMID:12084843 RGD:1581760 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746 		JBrowse link
G RAC1 Rac family small GTPase 1 ISO RGD PMID:9487126 RGD:2293350 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:12434153)
(MGI:6810810|PMID:12434153)		 ComplexPortal PMID:12434153 MGI:6810810 NCBI chr15:42,731,147...42,771,577
Ensembl chr15:42,731,426...42,770,624 		JBrowse link
G STN1 STN1 subunit of CST complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G TNFAIP1 TNF alpha induced protein 1 ISO RGD PMID:15726626 RGD:1357162 NCBI chr 9:42,588,009...42,597,961
Ensembl chr 9:42,588,112...42,595,596 		JBrowse link
G UCN urocortin ISO RGD PMID:11087261 RGD:1642796 NCBI chr17:21,278,512...21,280,404
Ensembl chr17:21,278,932...21,279,312 		JBrowse link
positive regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 ISO RGD PMID:8123045 RGD:11535022 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
positive regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:11125146) CAFA PMID:11125146 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
positive regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215406) Ensembl
MGI		 PMID:20215406 GO_REF:0000107 NCBI chr10:300,863...306,546
Ensembl chr10:300,903...305,438 		JBrowse link
G CIZ1 CDKN1A interacting zinc finger protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215406)
(PMID:15585571)		 Ensembl
MGI		 PMID:15585571 PMID:20215406 GO_REF:0000107 NCBI chr 9:55,303,189...55,322,429
Ensembl chr 9:55,303,129...55,318,945 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chr27:42,067,845...42,102,699
Ensembl chr27:42,067,898...42,105,870 		JBrowse link
G FAM178B family with sequence similarity 178 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:44,991,806...45,101,977
Ensembl chr10:45,020,892...45,101,933 		JBrowse link
G FMN2 formin 2 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chr 7:31,657,371...32,024,777
Ensembl chr 7:31,697,245...32,023,472 		JBrowse link
G FOXM1 forkhead box M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:41,894,605...41,905,656
Ensembl chr27:41,894,672...41,905,663 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (MGI:6467697|PMID:29125140), (MGI:6716977|PMID:33115731) UniProt PMID:29125140 PMID:33115731 MGI:6467697 MGI:6716977 NCBI chr12:35,434,123...35,435,679
Ensembl chr12:35,434,123...35,468,943 		JBrowse link
G LOC119868036 ubiquitin-conjugating enzyme E2 variant 2 involved_in IEA Ensembl GO_REF:0000107
G MGMT O-6-methylguanine-DNA methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:38,204,611...38,427,482
Ensembl chr28:38,204,610...38,427,380 		JBrowse link
G OOEP oocyte expressed protein involved_in ISS UniProt GO_REF:0000024 NCBI chr12:35,431,562...35,449,540
Ensembl chr12:35,448,015...35,449,511 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:32538779) UniProt PMID:32538779 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:14,792,851...14,877,024
Ensembl chr 3:14,793,363...14,869,755 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr28:13,595,194...13,656,644
Ensembl chr28:13,595,831...13,651,638 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) UniProt PMID:23509288 NCBI chr35:79,188...503,687
Ensembl chr35:79,185...514,797 		JBrowse link
G SPIRE1 spire type actin nucleation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:77,860,287...78,062,894
Ensembl chr 7:77,854,875...78,092,466 		JBrowse link
G SPIRE2 spire type actin nucleation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,732,855...63,765,162
Ensembl chr 5:63,732,842...63,753,419 		JBrowse link
G TIMELESS timeless circadian regulator involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) ComplexPortal PMID:16129784 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,574,153...32,586,222
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
G ZCWPW1 zinc finger CW-type and PWWP domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:9,239,626...9,314,972
Ensembl chr 6:9,246,264...9,271,330 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845 		JBrowse link
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR2 actin related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,696,068...64,733,027
Ensembl chr10:64,696,111...64,730,553 		JBrowse link
G ARID2 AT-rich interaction domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:8,411,092...8,579,735
Ensembl chr27:8,412,377...8,579,882 		JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25520194) MGI PMID:25520194 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BRD8 bromodomain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:25,793,375...25,825,868
Ensembl chr11:25,793,668...25,825,726 		JBrowse link
G CREBBP CREB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,077,164...16,085,666
Ensembl chr15:16,077,206...16,085,687 		JBrowse link
G EP400 E1A binding protein p400 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:848,028...951,135
Ensembl chr26:848,016...951,171 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 2:14,566,177...14,659,774
Ensembl chr 2:14,565,560...14,659,353 		JBrowse link
G EPC2 enhancer of polycomb homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:50,356,490...50,484,405
Ensembl chr19:50,416,340...50,482,878 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G FANCB FA complementation group B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) TreeGrafter
MGI		 PMID:25520194 GO_REF:0000118 NCBI chr  X:10,690,826...11,140,838
Ensembl chr  X:11,095,200...11,141,029 		JBrowse link
G FUS FUS RNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,059,904...17,071,227
Ensembl chr 6:17,060,061...17,071,178 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,204,861...55,224,543
Ensembl chr20:55,204,868...55,224,528 		JBrowse link
G HELQ helicase, POLQ like involved_in ISO (MGI:5547892|PMID:24005329) UniProt PMID:24005329 MGI:5547892 NCBI chr32:7,245,867...7,290,138
Ensembl chr32:7,245,230...7,290,014 		JBrowse link
G ING3 inhibitor of growth family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,067,282...59,093,399
Ensembl chr14:59,067,351...59,092,976 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (PMID:31609975)
(MGI:6716962|PMID:25936915)		 UniProt PMID:25936915 PMID:31609975 MGI:6716962 NCBI chr12:35,434,123...35,435,679
Ensembl chr12:35,434,123...35,468,943 		JBrowse link
G MBTD1 mbt domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:27,010,554...27,078,417
Ensembl chr 9:27,013,483...27,078,202 		JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,944,059...4,971,573
Ensembl chr15:4,943,430...4,964,391 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,127,152...58,149,709
Ensembl chr 3:58,127,669...58,193,005 		JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:77,084,940...77,097,900
Ensembl chr  X:77,085,599...77,086,465 		JBrowse link
G MRGBP MRG domain binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:46,634,580...46,637,222
Ensembl chr24:46,634,668...46,637,354 		JBrowse link
G MRNIP MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chr11:1,834,148...1,859,601
Ensembl chr11:1,833,967...1,859,347 		JBrowse link
G OOEP oocyte expressed protein involved_in ISS UniProt GO_REF:0000024 NCBI chr12:35,431,562...35,449,540
Ensembl chr12:35,448,015...35,449,511 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,727,905...63,863,599
Ensembl chr10:63,729,604...63,743,303 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,529,841...55,553,604
Ensembl chr20:55,524,443...55,553,525 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 involved_in ISO (PMID:15741314), (PMID:29651020) UniProt PMID:15741314 PMID:29651020 NCBI chr 1:106,849,864...106,859,896
Ensembl chr 1:106,849,864...106,874,075 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G RNF126 ring finger protein 126 involved_in ISO (PMID:36563124) UniProt PMID:36563124 NCBI chr20:57,890,333...57,899,364
Ensembl chr20:57,891,413...57,898,863 		JBrowse link
G RNF8 ring finger protein 8 involved_in ISO (PMID:23115235) UniProt PMID:23115235 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:72,352,966...72,386,469
Ensembl chr 4:72,352,986...72,386,307 		JBrowse link
G TIMELESS timeless circadian regulator involved_in ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 6:10,519,734...10,635,175
Ensembl chr 6:10,519,711...10,632,776 		JBrowse link
G VPS72 vacuolar protein sorting 72 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:60,239,299...60,252,323
Ensembl chr17:60,239,395...60,252,280 		JBrowse link
G WAS WASP actin nucleation promoting factor involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr  X:41,882,240...41,890,053
Ensembl chr  X:41,882,875...41,890,058 		JBrowse link
G WDR48 WD repeat domain 48 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,716,598...8,766,242
Ensembl chr23:8,715,700...8,764,678 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,574,153...32,586,222
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
G YEATS4 YEATS domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:11,364,435...11,382,340
Ensembl chr10:11,364,553...11,382,645 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase involved_in ISO (PMID:26237645) UniProt PMID:26237645 NCBI chr 7:32,900,250...32,927,436
Ensembl chr 7:32,901,586...32,927,412 		JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,655,783...49,691,899
Ensembl chr18:49,637,610...49,827,034 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,334,687...102,342,090
Ensembl chr 1:102,333,543...102,342,118 		JBrowse link
G LOC485121 lysine-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr21:6,002,292...6,037,344
Ensembl chr21:5,987,723...6,004,783 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279 		JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:20620605), (PMID:21491884) UniProt PMID:20620605 PMID:21491884 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:15,957,863...16,037,336
Ensembl chr24:15,957,852...16,038,008 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) UniProt PMID:29656893 PMID:29789392 NCBI chr 4:34,665,111...34,740,645
Ensembl chr 4:34,688,245...34,763,705 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IEA TreeGrafter GO_REF:0000118
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,359,286...69,505,067
Ensembl chr 7:69,358,447...69,621,067 		JBrowse link
G TOP2B DNA topoisomerase II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chr23:18,159,521...18,206,413
Ensembl chr23:18,146,095...18,206,287 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,574,153...32,586,222
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNFSF4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chr 7:25,883,297...25,909,608
Ensembl chr 7:25,883,251...25,906,892 		JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC3 exosome component 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21255825) Ensembl
MGI		 PMID:21255825 GO_REF:0000107 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598 		JBrowse link
G EXOSC6 exosome component 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21255825) Ensembl
MGI		 PMID:21255825 GO_REF:0000107 NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462 		JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,655,783...49,691,899
Ensembl chr18:49,637,610...49,827,034 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,334,687...102,342,090
Ensembl chr 1:102,333,543...102,342,118 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:15,957,863...16,037,336
Ensembl chr24:15,957,852...16,038,008 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr 4:34,665,111...34,740,645
Ensembl chr 4:34,688,245...34,763,705 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IEA TreeGrafter GO_REF:0000118
G TFRC transferrin receptor involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr33:29,206,024...29,237,221
Ensembl chr33:29,208,609...29,238,242 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134 		JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23241889) Ensembl
MGI		 PMID:23241889 GO_REF:0000107 NCBI chr 3:62,164,888...62,228,006
Ensembl chr 3:62,167,939...62,228,035 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TNFSF12 tumor necrosis factor (ligand) superfamily, member 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:32,473,543...32,481,596
Ensembl chr 5:32,473,083...32,481,121 		JBrowse link
G TNFSF13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14988498) MGI
TreeGrafter
Ensembl		 PMID:14988498 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:32,482,723...32,484,790
Ensembl chr 5:32,482,723...32,484,789 		JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCF1 cardiotrophin like cytokine factor 1 involved_in ISO (MGI:3777853|PMID:12023368) BHF-UCL PMID:12023368 MGI:3777853 NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651 		JBrowse link
G IL4 interleukin 4 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:14988498) UniProt
MGI		 PMID:14988498 GO_REF:0000024 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075 		JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25404367) Ensembl
MGI		 PMID:25404367 GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629 		JBrowse link
G CD28 CD28 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7688139) Ensembl
MGI		 PMID:7688139 GO_REF:0000107 NCBI chr37:12,503,849...12,536,362
Ensembl chr37:12,503,811...12,532,854 		JBrowse link
G CD40 CD40 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12882831) TreeGrafter
MGI		 PMID:12882831 GO_REF:0000118 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301 		JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698 		JBrowse link
G IL2 interleukin 2 acts_upstream_of_or_within ISO (PMID:1830926) MGI PMID:1830926 NCBI chr19:17,750,780...17,756,394
Ensembl chr19:17,750,780...17,756,394 		JBrowse link
G IL4 interleukin 4 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12882831), (PMID:14988498) UniProt
MGI		 PMID:12882831 PMID:14988498 GO_REF:0000024 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534 		JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (MGI:5752090|PMID:26744420) UniProt PMID:26744420 MGI:5752090 NCBI chr 6:17,876,740...17,879,546 JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9015183) Ensembl
MGI		 PMID:9015183 GO_REF:0000107 NCBI chr 7:4,155,876...4,282,151
Ensembl chr 7:4,137,728...4,282,124 		JBrowse link
G TBX21 T-box transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12882831) Ensembl
MGI		 PMID:12882831 GO_REF:0000107 NCBI chr 9:24,077,752...24,086,560
Ensembl chr 9:24,077,761...24,086,261 		JBrowse link
positive regulation of meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) UniProt PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chr 3:31,067,936...31,188,066
Ensembl chr 3:31,028,026...31,186,827 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC10 histone deacetylase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,996,307...17,001,365
Ensembl chr10:16,995,762...17,078,262 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:15014079) UniProt PMID:15014079 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,295,110...103,312,562 JBrowse link
positive regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042 		JBrowse link
G MTNAP1 mitochondrial nucleoid associated protein 1 involved_in ISO (MGI:7564184|PMID:37676315) UniProt PMID:37676315 MGI:7564184 NCBI chr 9:6,937,549...6,948,439
Ensembl chr 9:6,937,588...6,947,403 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in ISO (PMID:31550240) UniProt PMID:31550240 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2161540) Ensembl
MGI		 PMID:2161540 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
positive regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125 		JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G CDC7 cell division cycle 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:57,336,165...57,362,478
Ensembl chr 6:57,337,407...57,362,757 		JBrowse link
G DBF4 DBF4 zinc finger involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:13,983,832...14,019,917
Ensembl chr14:13,803,576...14,019,704 		JBrowse link
G DBF4B DBF4B-CDC7 kinase regulatory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:18,734,678...18,768,128 JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G WIZ WIZ zinc finger involved_in ISO (PMID:23545495) UniProt PMID:23545495 NCBI chr20:46,746,991...46,773,065
Ensembl chr20:46,747,062...46,817,240 		JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102152102 zinc finger protein 345-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:100,147,156...100,159,537 JBrowse link
G LOC111089966 zinc finger protein 271 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:54,714,912...54,727,638 JBrowse link
G LOC479185 zinc finger protein 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:261,916...296,972
Ensembl chr 4:263,488...296,916 		JBrowse link
G PRDM5 PR/SET domain 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:19,129,418...19,327,377
Ensembl chr19:19,129,081...19,325,590 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B acts_upstream_of_or_within ISO (PMID:12556476) MGI PMID:12556476 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G ZNF202 zinc finger protein 202 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:10,705,862...10,722,372
Ensembl chr 5:10,707,354...10,720,951 		JBrowse link
G ZNF628 zinc finger protein 628 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:102,225,559...102,232,094
Ensembl chr 1:102,225,674...102,228,781 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
positive regulation of strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
positive regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
positive regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKB aurora kinase B involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chr 5:33,014,098...33,028,951
Ensembl chr 5:33,014,102...33,033,948 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,594,450...52,604,236
Ensembl chr20:52,594,536...52,602,150 		JBrowse link
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,590,615...49,702,289
Ensembl chr 1:49,548,274...49,702,289 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,317,061...37,322,792
Ensembl chr13:37,316,424...37,322,792 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425 		JBrowse link
G MAPKAPK5 MAPK activated protein kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,380,551...9,420,564
Ensembl chr26:9,319,180...9,419,236 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:546,964...551,360
Ensembl chr10:546,964...551,107 		JBrowse link
G NEK2 NIMA related kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:10,039,617...10,052,511
Ensembl chr 7:10,040,187...10,052,512 		JBrowse link
G NEK7 NIMA related kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:4,557,754...4,755,912
Ensembl chr 7:4,555,231...4,704,955 		JBrowse link
G PKIB cAMP-dependent protein kinase inhibitor beta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chr 1:61,960,466...62,049,553
Ensembl chr 1:61,967,129...62,088,547 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G PRKCQ protein kinase C theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:29,319,123...29,505,338
Ensembl chr 2:29,318,870...29,505,337 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:23959892) BHF-UCL PMID:23959892 NCBI chr24:47,219,977...47,248,791 JBrowse link
G TNKS tankyrase involved_in ISO (PMID:25939383)
(PMID:21531765)		 BHF-UCL PMID:21531765 PMID:25939383 NCBI chr16:34,826,248...35,040,004
Ensembl chr16:34,831,662...35,039,946 		JBrowse link
G TNKS2 tankyrase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:6,286,125...6,354,284
Ensembl chr28:6,285,690...6,352,317 		JBrowse link
positive regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:48,404,351...48,456,360
Ensembl chr23:48,407,316...48,456,654 		JBrowse link
G GNL3 G protein nucleolar 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,103,298...37,110,350
Ensembl chr20:37,103,320...37,110,207 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741 		JBrowse link
G PPP1R10 protein phosphatase 1 regulatory subunit 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:416,533...434,777
Ensembl chr12:417,680...427,799 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chr24:47,219,977...47,248,791 JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15968270) Ensembl
MGI		 PMID:15968270 GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
positive regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr17:48,674,004...48,676,869 JBrowse link
G INO80C INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:54,569,954...54,586,902
Ensembl chr 7:54,569,972...54,586,782 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,581,531...14,647,930
Ensembl chr37:14,591,055...14,647,936 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,033,366...18,041,604
Ensembl chr 6:18,033,363...18,041,308 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:4,944,278...4,982,377
Ensembl chr 5:4,946,893...4,980,996 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,090,723...103,098,601
Ensembl chr 1:102,989,360...103,098,573 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (MGI:5705431|PMID:26586427) BHF-UCL PMID:26586427 MGI:5705431 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G AURKB aurora kinase B involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chr 5:33,014,098...33,028,951
Ensembl chr 5:33,014,102...33,033,948 		JBrowse link
G CCT2 chaperonin containing TCP1 subunit 2 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr10:11,560,287...11,586,559
Ensembl chr10:11,560,396...11,578,433 		JBrowse link
G CCT3 chaperonin containing TCP1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,566,274...41,583,903
Ensembl chr 7:41,566,292...41,584,863 		JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:61,859,148...61,874,030
Ensembl chr10:61,859,245...61,874,389 		JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:4,035,851...4,049,131
Ensembl chr34:4,035,857...4,049,244 		JBrowse link
G CCT6A chaperonin containing TCP1 subunit 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:546,278...556,996
Ensembl chr 6:546,307...557,001 		JBrowse link
G CCT8 chaperonin containing TCP1 subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:24,061,185...24,075,002
Ensembl chr31:24,061,252...24,075,364 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5428344|PMID:22723415) BHF-UCL
Ensembl		 PMID:22723415 GO_REF:0000107 MGI:5428344 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15240872) Ensembl
MGI		 PMID:15240872 GO_REF:0000107 NCBI chr  X:122,838,787...122,850,870
Ensembl chr  X:122,838,645...122,850,884 		JBrowse link
G FBXO4 F-box protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:67,620,947...67,664,862
Ensembl chr 4:67,651,275...67,664,915 		JBrowse link
G GCH1 GTP cyclohydrolase 1 ISO RGD PMID:30690003 RGD:401717569 NCBI chr 8:30,733,422...30,784,067
Ensembl chr 8:30,732,608...30,784,156 		JBrowse link
G HMBOX1 homeobox containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:28,489,472...28,679,322
Ensembl chr25:28,489,506...28,679,748 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G LOC100856782 T-complex protein 1 subunit eta involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr34:37,026,053...37,027,839 JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,594,450...52,604,236
Ensembl chr20:52,594,536...52,602,150 		JBrowse link
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,590,615...49,702,289
Ensembl chr 1:49,548,274...49,702,289 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,317,061...37,322,792
Ensembl chr13:37,316,424...37,322,792 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425 		JBrowse link
G MAPKAPK5 MAPK activated protein kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,380,551...9,420,564
Ensembl chr26:9,319,180...9,419,236 		JBrowse link
G NEK2 NIMA related kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:10,039,617...10,052,511
Ensembl chr 7:10,040,187...10,052,512 		JBrowse link
G NEK7 NIMA related kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:4,557,754...4,755,912
Ensembl chr 7:4,555,231...4,704,955 		JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,629,137...28,783,671
Ensembl chr 6:28,629,174...28,783,901 		JBrowse link
G PKIB cAMP-dependent protein kinase inhibitor beta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chr 1:61,960,466...62,049,553
Ensembl chr 1:61,967,129...62,088,547 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G PRKCQ protein kinase C theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:29,319,123...29,505,338
Ensembl chr 2:29,318,870...29,505,337 		JBrowse link
G TCP1 t-complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,029,260...49,038,023
Ensembl chr 1:49,029,282...49,038,020 		JBrowse link
G TNKS tankyrase involved_in ISO (PMID:11739745)
(PMID:12782650), (PMID:18221737)		 BHF-UCL PMID:11739745 PMID:12782650 PMID:18221737 NCBI chr16:34,826,248...35,040,004
Ensembl chr16:34,831,662...35,039,946 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:48,404,351...48,456,360
Ensembl chr23:48,407,316...48,456,654 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G NAF1 nuclear assembly factor 1 ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,430,809...59,470,306 JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:23959892) BHF-UCL PMID:23959892 NCBI chr24:47,219,977...47,248,791 JBrowse link
positive regulation of telomeric loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chr24:47,219,977...47,248,791 JBrowse link
postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G LOC102156002 BRCA1-associated RING domain protein 1-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:2,420,559...2,423,280 JBrowse link
G LOC111094434 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr37:7,056,154...7,057,445 JBrowse link
G LOC119868036 ubiquitin-conjugating enzyme E2 variant 2 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119877539 ubiquitin-conjugating enzyme E2 N involved_in IEA TreeGrafter GO_REF:0000118
G LOC119881719 ubiquitin-conjugating enzyme E2 variant 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G LOC607817 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:7,957,753...7,958,395 JBrowse link
G LOC607889 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:18,768,121...18,771,963 JBrowse link
G LOC609136 ubiquitin-conjugating enzyme E2N pseudogene involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:33,359,479...33,360,139 JBrowse link
G LOC609637 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:41,828,273...41,828,755 JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7628020) Ensembl
MGI		 PMID:7628020 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10871396) Ensembl
MGI
UniProt		 PMID:10871396 GO_REF:0000107 GO_REF:0000117 NCBI chr12:12,034,544...12,070,305
Ensembl chr12:12,034,583...12,069,707 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr20:9,163,322...9,271,224
Ensembl chr20:9,163,428...9,263,730 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr24:36,570,172...36,601,200
Ensembl chr24:36,570,172...36,603,212 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15968270) InterPro
MGI
TreeGrafter
Ensembl		 PMID:15968270 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
protein-DNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,584,326...37,595,316 JBrowse link
G GCNA germ cell nuclear acidic peptidase involved_in ISO (PMID:30914427) UniProt PMID:30914427 NCBI chr  X:55,859,750...55,881,164
Ensembl chr  X:55,860,661...55,880,678 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,120,151...8,133,402
Ensembl chr 4:8,120,351...8,133,191 		JBrowse link
G TEX264 testis expressed 264, ER-phagy receptor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:37,928,952...37,959,382
Ensembl chr20:37,928,953...37,955,993 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714 		JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:16,204,932...16,235,893
Ensembl chr29:16,209,353...16,235,586 		JBrowse link
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB2 damage specific DNA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15558025) Ensembl
MGI		 PMID:15558025 GO_REF:0000107 NCBI chr18:42,354,201...42,378,463
Ensembl chr18:42,354,572...42,377,947 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9150142) Ensembl
MGI		 PMID:9150142 GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G POLB DNA polymerase beta ISO RGD PMID:12388548 RGD:633643 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322 		JBrowse link
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10871396) Ensembl
MGI		 PMID:10871396 GO_REF:0000107 NCBI chr12:12,034,544...12,070,305
Ensembl chr12:12,034,583...12,069,707 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10454634) Ensembl
MGI		 PMID:10454634 GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:12660172) MGI PMID:12660172 NCBI chr31:34,275,400...34,283,373
Ensembl chr31:34,275,839...34,282,340 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:21149730)
(MGI:5298332|PMID:21149730)		 UniProt PMID:21149730 MGI:5298332 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17049932) Ensembl
MGI		 PMID:17049932 GO_REF:0000107 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRME1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (PMID:32345962) MGI PMID:32345962 NCBI chr20:48,566,165...48,586,951
Ensembl chr20:48,566,525...48,583,329 		JBrowse link
G C18H11orf80 involved_in IEA TreeGrafter GO_REF:0000118
G C6H1orf146 chromosome 6 C1orf146 homolog involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:56,665,170...56,723,591
Ensembl chr 6:56,679,039...56,723,652 		JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:17,673,065...17,701,701
Ensembl chr15:17,673,609...17,695,336 		JBrowse link
G CEP63 centrosomal protein 63 acts_upstream_of_or_within ISO (PMID:26158450) MGI PMID:26158450 NCBI chr23:31,249,517...31,303,145
Ensembl chr23:31,249,673...31,303,142 		JBrowse link
G CHTF18 chromosome transmission fidelity factor 18 acts_upstream_of_or_within ISO (PMID:23133398) MGI PMID:23133398 NCBI chr 6:39,806,924...39,815,145
Ensembl chr 6:39,806,673...39,815,333 		JBrowse link
G CNTD1 cyclin N-terminal domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24891606) Ensembl
MGI
TreeGrafter		 PMID:24891606 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:20,214,310...20,222,938
Ensembl chr 9:20,188,167...20,222,743 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr10:26,228,662...26,265,377
Ensembl chr10:26,230,428...26,264,820 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:56,239,820...56,260,384
Ensembl chr  X:56,239,850...56,260,759 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:70,793,975...70,918,151
Ensembl chr 1:70,835,410...70,917,962 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10385520), (PMID:16307920), (PMID:8673133) Ensembl
MGI		 PMID:8673133 PMID:10385520 PMID:16307920 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MND1 meiotic nuclear divisions 1 involved_in ISO (PMID:16407260) ComplexPortal PMID:16407260 NCBI chr15:51,151,794...51,214,736
Ensembl chr15:51,125,238...51,214,597 		JBrowse link
G MSH4 mutS homolog 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:70,745,777...70,822,507
Ensembl chr 6:70,746,634...70,823,004 		JBrowse link
G PSMC3IP PSMC3 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
G PSME3 proteasome activator subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:20,185,997...20,193,320
Ensembl chr 9:20,188,167...20,222,743 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51C RAD51 paralog C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17312021) Ensembl
MGI
TreeGrafter		 PMID:17312021 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RAD54B RAD54 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:39,096,680...39,195,054
Ensembl chr29:39,098,098...39,195,112 		JBrowse link
G RAD54L RAD54 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:14,111,168...14,139,819
Ensembl chr15:14,111,157...14,139,301 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RNF212 ring finger protein 212 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:91,453,856...91,483,674
Ensembl chr 3:91,453,367...91,474,547 		JBrowse link
G RNF212B ring finger protein 212B involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:3,509,481...3,552,600
Ensembl chr 8:3,509,638...3,544,740 		JBrowse link
G SHOC1 shortage in chiasmata 1 involved_in ISO (MGI:6272683|PMID:30272023) UniProt PMID:30272023 MGI:6272683 NCBI chr11:66,283,093...66,359,674
Ensembl chr11:66,282,572...66,363,922 		JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16307920) Ensembl
MGI
TreeGrafter
InterPro		 PMID:16307920 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr24:42,345,595...42,360,851
Ensembl chr24:42,345,547...42,384,481 		JBrowse link
G SYCE3 synaptonemal complex central element protein 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr10:16,748,760...16,772,496
Ensembl chr10:16,758,528...16,772,344 		JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:52,538,909...52,681,495
Ensembl chr17:52,539,615...52,648,133 		JBrowse link
G TEX11 testis expressed 11 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:54,958,568...55,268,720
Ensembl chr  X:54,958,568...55,268,684 		JBrowse link
G TOP6BL TOP6B like initiator of meiotic double strand breaks involved_in ISO (MGI:5752405|PMID:26917764) UniProt PMID:26917764 MGI:5752405 NCBI chr18:50,512,681...50,617,666
Ensembl chr18:50,549,497...50,560,943 		JBrowse link
G TRIM2 tripartite motif containing 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:50,973,758...51,104,422 JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:17696610) Ensembl
MGI
GO_Central
TreeGrafter
UniProt		 PMID:17696610 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr34:11,522,940...11,539,885
Ensembl chr34:11,522,940...11,539,885 		JBrowse link
G UBR2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:11,167,286...11,296,817
Ensembl chr12:11,167,346...11,294,911 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:15,850,602...15,893,452
Ensembl chr24:15,814,770...15,893,458 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,746,637...58,862,550
Ensembl chr 1:58,767,159...58,859,282 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HROB homologous recombination factor with OB-fold involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:19,230,345...19,245,518
Ensembl chr 9:19,230,399...19,245,624 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr27:41,885,779...41,906,252
Ensembl chr27:41,886,052...41,891,759 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:32,344,348...32,421,485
Ensembl chr32:32,344,791...32,418,441 		JBrowse link
regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM1 apoptosis inducing factor mitochondria associated 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15703386) Ensembl
MGI		 PMID:15703386 GO_REF:0000107 NCBI chr  X:101,275,027...101,307,551
Ensembl chr  X:101,275,017...101,307,367 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15703386) Ensembl
MGI		 PMID:15703386 GO_REF:0000107 NCBI chr15:38,026,893...38,160,842
Ensembl chr15:38,028,132...38,114,987 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (PMID:12082630) BHF-UCL PMID:12082630 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G CIDEA cell death inducing DFFA like effector a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:77,685,383...77,703,320
Ensembl chr 7:77,684,863...77,702,934 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (PMID:11981756) MGI PMID:11981756 NCBI chr12:5,746,898...5,755,103
Ensembl chr12:5,745,852...5,892,281 		JBrowse link
G ING4 inhibitor of growth family member 4 involved_in ISO (PMID:16387653) ComplexPortal PMID:16387653 NCBI chr27:38,371,656...38,379,251
Ensembl chr27:38,371,766...38,379,029 		JBrowse link
G ING5 inhibitor of growth family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:51,535,521...51,556,264
Ensembl chr25:51,534,753...51,554,644 		JBrowse link
G JADE1 jade family PHD finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,187,345...12,250,343
Ensembl chr19:12,189,281...12,250,349 		JBrowse link
G JADE2 jade family PHD finger 2 involved_in ISO (PMID:16387653) ComplexPortal PMID:16387653 NCBI chr11:22,646,487...22,698,436
Ensembl chr11:22,648,221...22,698,448 		JBrowse link
G JADE3 jade family PHD finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,545,474...40,682,593
Ensembl chr  X:40,521,569...40,680,536 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,841,916...25,875,245
Ensembl chr 9:25,842,054...25,873,674 		JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,944,059...4,971,573
Ensembl chr15:4,943,430...4,964,391 		JBrowse link
G PDGFA platelet derived growth factor subunit A NOT|involved_in ISO (PMID:11788434), (PMID:19019919) UniProt PMID:11788434 PMID:19019919 NCBI chr 6:16,271,082...16,293,246
Ensembl chr 6:16,270,104...16,292,396 		JBrowse link
G SH2B1 SH2B adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,370,881...18,380,965
Ensembl chr 6:18,371,832...18,380,962 		JBrowse link
G TFDP1 transcription factor Dp-1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15448153) Ensembl
MGI		 PMID:15448153 GO_REF:0000107 NCBI chr22:60,863,541...60,897,491
Ensembl chr22:60,870,413...60,896,629 		JBrowse link
G TOM1L1 target of myb1 like 1 membrane trafficking protein NOT|involved_in ISO (PMID:16479011) UniProt PMID:16479011 NCBI chr 9:30,024,203...30,073,032
Ensembl chr 9:30,025,132...30,072,988 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELB DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,766,023...8,797,055
Ensembl chr10:8,765,617...8,798,092 		JBrowse link
regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SENP2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (PMID:19090619) MGI PMID:19090619 NCBI chr34:18,325,373...18,357,152
Ensembl chr34:18,325,553...18,356,192 		JBrowse link
regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG3 DNA ligase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:17,089,514...17,167,917
Ensembl chr32:17,090,293...17,166,648 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,615,271...55,619,493
Ensembl chr 9:55,615,827...55,620,236 		JBrowse link
G IER3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20467439) Ensembl
MGI		 PMID:20467439 GO_REF:0000107 NCBI chr12:529,002...530,328
Ensembl chr12:529,339...530,232 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr17:48,674,004...48,676,869 JBrowse link
G INO80C INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:54,569,954...54,586,902
Ensembl chr 7:54,569,972...54,586,782 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,581,531...14,647,930
Ensembl chr37:14,591,055...14,647,936 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,033,366...18,041,604
Ensembl chr 6:18,033,363...18,041,308 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:4,944,278...4,982,377
Ensembl chr 5:4,946,893...4,980,996 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr28:1,651,698...1,767,210
Ensembl chr28:1,652,670...1,766,895 		JBrowse link
G PHF13 PHD finger protein 13 involved_in ISO (PMID:23034801) UniProt PMID:23034801 NCBI chr 5:60,434,218...60,441,930
Ensembl chr 5:60,433,328...60,439,672 		JBrowse link
G RADX RPA1 related single stranded DNA binding protein, X-linked involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:80,146,335...80,234,732
Ensembl chr  X:80,146,040...80,235,739 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SGF29 SAGA complex associated factor 29 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,179,656...18,209,206
Ensembl chr 6:18,172,289...18,209,160 		JBrowse link
G SIRT7 sirtuin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:377,141...383,355
Ensembl chr 9:376,445...442,919 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23695662) MGI PMID:23695662 NCBI chr  X:41,894,623...41,907,854
Ensembl chr  X:41,893,045...41,906,403 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,090,723...103,098,601
Ensembl chr 1:102,989,360...103,098,573 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G USP1 ubiquitin specific peptidase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:47,655,533...47,666,767
Ensembl chr 5:47,656,039...47,666,210 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G ANKRD17 ankyrin repeat domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,892,872...62,046,625
Ensembl chr13:61,893,951...62,012,404 		JBrowse link
G BAZ1A bromodomain adjacent to zinc finger domain 1A involved_in ISO (PMID:12434153) ComplexPortal PMID:12434153 NCBI chr 8:13,604,694...13,694,508
Ensembl chr 8:13,605,182...13,693,847 		JBrowse link
G CCNA2 cyclin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,317,866...18,324,592
Ensembl chr19:18,318,004...18,323,691 		JBrowse link
G CHRAC1 chromatin accessibility complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,162,189...35,164,286
Ensembl chr13:35,161,767...35,164,101 		JBrowse link
G DSCC1 DNA replication and sister chromatid cohesion 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,825,522...18,841,905
Ensembl chr13:18,825,844...18,841,873 		JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584 		JBrowse link
G ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:66,429,492...66,502,232
Ensembl chr 7:66,445,041...66,502,094 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,785,641...29,812,536
Ensembl chr25:29,787,132...29,811,112 		JBrowse link
G FBXO5 F-box protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:43,138,338...43,149,546
Ensembl chr 1:43,138,889...43,149,297 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
G ID3 inhibitor of DNA binding 3 ISO RGD PMID:15966691 RGD:1549434 NCBI chr 2:75,880,659...75,881,786
Ensembl chr 2:75,880,657...75,882,010 		JBrowse link
G ING5 inhibitor of growth family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:51,535,521...51,556,264
Ensembl chr25:51,534,753...51,554,644 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INO80B INO80 complex subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,674,004...48,676,869 JBrowse link
G INO80C INO80 complex subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:54,569,954...54,586,902
Ensembl chr 7:54,569,972...54,586,782 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,581,531...14,647,930
Ensembl chr37:14,591,055...14,647,936 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,033,366...18,041,604
Ensembl chr 6:18,033,363...18,041,308 		JBrowse link
G JADE1 jade family PHD finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,187,345...12,250,343
Ensembl chr19:12,189,281...12,250,349 		JBrowse link
G JADE2 jade family PHD finger 2 involved_in ISO (PMID:16387653) ComplexPortal PMID:16387653 NCBI chr11:22,646,487...22,698,436
Ensembl chr11:22,648,221...22,698,448 		JBrowse link
G JADE3 jade family PHD finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,545,474...40,682,593
Ensembl chr  X:40,521,569...40,680,536 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,841,916...25,875,245
Ensembl chr 9:25,842,054...25,873,674 		JBrowse link
G MCIDAS multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:42,577,028...42,583,120
Ensembl chr 2:42,577,039...42,583,011 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,944,059...4,971,573
Ensembl chr15:4,943,430...4,964,391 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:4,944,278...4,982,377
Ensembl chr 5:4,946,893...4,980,996 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G OBI1 ORC ubiquitin ligase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr22:32,006,441...32,047,609
Ensembl chr22:32,007,210...32,047,527 		JBrowse link
G ORC3 origin recognition complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,047,341...47,108,126
Ensembl chr12:47,047,195...47,108,117 		JBrowse link
G ORC5 origin recognition complex subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,088,143...16,183,813
Ensembl chr18:16,088,184...16,166,718 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA InterPro GO_REF:0000002 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,757,779...67,760,417
Ensembl chr11:67,758,918...67,760,374 		JBrowse link
G RBBP6 RB binding protein 6, ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:21,480,445...21,512,436
Ensembl chr 6:21,480,864...21,511,335 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:12434153) ComplexPortal PMID:12434153 NCBI chr15:42,731,147...42,771,577
Ensembl chr15:42,731,426...42,770,624 		JBrowse link
G SMC3 structural maintenance of chromosomes 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:21,889,690...21,928,367
Ensembl chr28:21,889,662...21,928,034 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,090,723...103,098,601
Ensembl chr 1:102,989,360...103,098,573 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G USP37 ubiquitin specific peptidase 37 involved_in ISS UniProt GO_REF:0000024 NCBI chr37:25,090,702...25,186,503
Ensembl chr37:25,090,702...25,186,503 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
G ZBTB38 zinc finger and BTB domain containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:37,283,794...37,344,316
Ensembl chr23:37,297,101...37,341,506 		JBrowse link
regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INO80B INO80 complex subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,674,004...48,676,869 JBrowse link
G INO80C INO80 complex subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:54,569,954...54,586,902
Ensembl chr 7:54,569,972...54,586,782 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,581,531...14,647,930
Ensembl chr37:14,591,055...14,647,936 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,033,366...18,041,604
Ensembl chr 6:18,033,363...18,041,308 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:4,944,278...4,982,377
Ensembl chr 5:4,946,893...4,980,996 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,090,723...103,098,601
Ensembl chr 1:102,989,360...103,098,573 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G GMNN geminin DNA replication inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,796,558...22,805,961
Ensembl chr35:22,798,386...22,805,959 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,841,916...25,875,245
Ensembl chr 9:25,842,054...25,873,674 		JBrowse link
G MCIDAS multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:42,577,028...42,583,120
Ensembl chr 2:42,577,039...42,583,011 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:52,584,913...52,629,731
Ensembl chr 3:52,584,454...52,629,164 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:3,103,507...3,127,657
Ensembl chr35:3,103,418...3,127,504 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DEK DEK proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21653549) MGI
TreeGrafter		 PMID:21653549 GO_REF:0000118 NCBI chr35:17,014,802...17,045,308
Ensembl chr35:17,016,231...17,044,749 		JBrowse link
G LOC100688177 protein DEK-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:10,279,204...10,280,935 JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,085,048...18,092,861
Ensembl chr 6:18,085,116...18,092,854 		JBrowse link
G PPP4R2 protein phosphatase 4 regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:19,116,122...19,166,927
Ensembl chr20:19,118,124...19,167,264 		JBrowse link
G PPP4R3B protein phosphatase 4 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,405,121...56,467,907
Ensembl chr10:56,406,520...56,467,734 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK1 checkpoint kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,878,511...8,910,626
Ensembl chr 5:8,879,147...8,907,669 		JBrowse link
G FIGNL1 fidgetin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,788,063...1,792,900
Ensembl chr18:1,788,801...1,790,831 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24217620) MGI
Ensembl		 PMID:24217620 GO_REF:0000107 NCBI chr 2:76,313,742...76,375,716
Ensembl chr 2:76,156,434...76,375,632 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,085,048...18,092,861
Ensembl chr 6:18,085,116...18,092,854 		JBrowse link
G PPP4R2 protein phosphatase 4 regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:19,116,122...19,166,927
Ensembl chr20:19,118,124...19,167,264 		JBrowse link
G RAD51 RAD51 recombinase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr24:47,219,977...47,248,791 JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:34,665,111...34,740,645
Ensembl chr 4:34,688,245...34,763,705 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IEA InterPro GO_REF:0000002
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr35:79,188...503,687
Ensembl chr35:79,185...514,797 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18283110) InterPro
MGI
TreeGrafter		 PMID:18283110 GO_REF:0000002 GO_REF:0000118 NCBI chr16:33,423,546...33,517,458
Ensembl chr16:33,423,876...33,515,452 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:47,055,226...47,059,552 JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr10:64,696,068...64,733,027
Ensembl chr10:64,696,111...64,730,553 		JBrowse link
G LOC100688177 protein DEK-like acts_upstream_of_or_within ISO (PMID:21653549) MGI PMID:21653549 NCBI chr 3:10,279,204...10,280,935 JBrowse link
G MRNIP MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chr11:1,834,148...1,859,601
Ensembl chr11:1,833,967...1,859,347 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23241889) Ensembl
MGI		 PMID:23241889 GO_REF:0000107 NCBI chr 3:62,164,888...62,228,006
Ensembl chr 3:62,167,939...62,228,035 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr24:15,957,863...16,037,336
Ensembl chr24:15,957,852...16,038,008 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:47,055,226...47,059,552 JBrowse link
G WAS WASP actin nucleation promoting factor NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr  X:41,882,240...41,890,053
Ensembl chr  X:41,882,875...41,890,058 		JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor acts_upstream_of_or_within ISO (PMID:21211721) MGI PMID:21211721 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761 		JBrowse link
G MIR181B-2 microRNA mir-181b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:58,301,314...58,301,373
Ensembl chr 9:58,301,300...58,301,388 		JBrowse link
G MIR181D microRNA mir-181d acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr20:48,593,158...48,593,221 JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,859,154...42,896,044
Ensembl chr 9:42,859,361...42,904,487 		JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16275384) Ensembl
MGI		 PMID:16275384 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758 		JBrowse link
G IL27RA interleukin 27 receptor subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11057672) Ensembl
MGI		 PMID:11057672 GO_REF:0000107 NCBI chr20:48,456,766...48,475,414
Ensembl chr20:48,457,134...48,472,450 		JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17137798) Ensembl
MGI		 PMID:17137798 GO_REF:0000107 NCBI chr 2:36,978,148...37,065,247
Ensembl chr 2:36,961,024...37,064,303 		JBrowse link
G SLC15A4 solute carrier family 15 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:2,803,798...2,832,057
Ensembl chr26:2,802,724...2,831,530 		JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:14,559,476...14,588,950
Ensembl chr 9:14,559,388...14,588,530 		JBrowse link
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPV17 mitochondrial inner membrane protein MPV17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,280,523...21,290,967
Ensembl chr17:21,281,361...21,290,339 		JBrowse link
G STOX1 storkhead box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,013,893...20,065,480
Ensembl chr 4:20,014,007...20,060,394 		JBrowse link
regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL4 methyltransferase 4, N6-adenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,229,717...69,268,223
Ensembl chr 7:69,191,223...69,267,683 		JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15980864) Ensembl
MGI		 PMID:15980864 GO_REF:0000107 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160 		JBrowse link
regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 acts_upstream_of_or_within ISO (PMID:11850834) MGI PMID:11850834 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748 		JBrowse link
G DACH1 dachshund family transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:25,690,700...25,934,449
Ensembl chr22:25,726,597...25,934,550 		JBrowse link
G ILKAP ILK associated serine/threonine phosphatase ISO RGD PMID:9857069 RGD:632254 NCBI chr25:48,666,850...48,689,405
Ensembl chr25:48,666,849...48,689,381 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,507,198...29,561,565
Ensembl chr25:29,520,921...29,561,349 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUL4A cullin 4A acts_upstream_of_or_within ISO (PMID:19481525) MGI PMID:19481525 NCBI chr22:60,624,215...60,667,844
Ensembl chr22:60,624,241...60,666,616 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:3807115|PMID:18650382) UniProt PMID:18650382 MGI:3807115 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,841,916...25,875,245
Ensembl chr 9:25,842,054...25,873,674 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19506022) MGI
Ensembl		 PMID:19506022 GO_REF:0000107 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) MGI PMID:25378300 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC8 histone deacetylase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,357,205...56,574,443
Ensembl chr  X:56,357,177...56,574,401 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166 		JBrowse link
G LMNA lamin A/C involved_in ISO (PMID:25399868) BHF-UCL PMID:25399868 NCBI chr 7:41,702,491...41,719,870
Ensembl chr 7:41,508,450...41,746,931 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:29,223,507...29,232,584
Ensembl chr30:29,157,119...29,232,043 		JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,224,837...26,306,394
Ensembl chr 6:26,224,900...26,315,908 		JBrowse link
G SMG5 SMG5 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,598,111...41,624,575
Ensembl chr 7:41,598,104...41,624,575 		JBrowse link
G SMG6 SMG6 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,162,991...46,405,856
Ensembl chr 9:46,164,492...46,405,748 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
G YLPM1 YLP motif containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15100092) TreeGrafter
MGI		 PMID:15100092 GO_REF:0000118 NCBI chr 8:47,878,176...47,957,714
Ensembl chr 8:47,878,298...47,980,569 		JBrowse link
regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TINF2 TERF1 interacting nuclear factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:4,221,183...4,223,863
Ensembl chr 8:4,221,269...4,223,512 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,502,777...47,559,012
Ensembl chr 2:47,503,762...47,558,889 		JBrowse link
replication fork arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:30,641,557...30,657,353
Ensembl chr30:30,641,555...30,657,260 		JBrowse link
replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASF1A anti-silencing function 1A histone chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,821,324...58,834,935
Ensembl chr 1:58,821,521...58,946,475 		JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BOD1 biorientation of chromosomes in cell division 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:38,888,096...38,895,539 JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:66,465,813...66,520,414
Ensembl chr 3:66,474,570...66,519,777 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:14681210) MGI PMID:14681210 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,615,271...55,619,493
Ensembl chr 9:55,615,827...55,620,236 		JBrowse link
G CENPX centromere protein X involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
G DDX11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) UniProt PMID:26503245 NCBI chr27:42,067,845...42,102,699
Ensembl chr27:42,067,898...42,105,870 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:28,192,338...28,209,512 JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:26,342,419...26,350,561
Ensembl chr 9:26,344,438...26,349,997 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO (PMID:17289582) ComplexPortal PMID:17289582 NCBI chr 6:39,127,433...39,129,487 JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:66,631,411...66,644,753
Ensembl chr10:66,631,544...66,643,728 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,028,537...43,082,038
Ensembl chr 8:43,042,563...43,187,969 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,584,326...37,595,316 JBrowse link
G FANCM FA complementation group M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr12:35,434,123...35,435,679
Ensembl chr12:35,434,123...35,468,943 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:55,584,884...55,713,996
Ensembl chr12:55,588,888...55,713,341 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G OOEP oocyte expressed protein involved_in ISS UniProt GO_REF:0000024 NCBI chr12:35,431,562...35,449,540
Ensembl chr12:35,448,015...35,449,511 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:85,379,378...85,389,175 JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G RAD51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22778135) Ensembl
MGI		 PMID:22778135 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RECQL RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,960,909...76,001,088
Ensembl chr 5:75,960,955...76,000,467 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5522574|PMID:24115439) BHF-UCL PMID:24115439 MGI:5522574 NCBI chr24:47,219,977...47,248,791 JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:20457750), (PMID:22231448), (PMID:24573677) UniProt PMID:20457750 PMID:22231448 PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr37:23,364,941...23,425,206
Ensembl chr37:23,367,220...23,419,248 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr30:30,641,557...30,657,353
Ensembl chr30:30,641,555...30,657,260 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:37,846,010...37,857,633
Ensembl chr13:37,846,149...37,857,668 		JBrowse link
G TRAIP TRAF interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:39,430,109...39,454,437
Ensembl chr20:39,430,489...39,453,933 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
replication fork reversal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARM1 coactivator associated arginine methyltransferase 1 involved_in ISO (PMID:33412112) UniProt PMID:33412112 NCBI chr20:50,328,466...50,371,845
Ensembl chr20:50,331,030...50,348,195 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) MGI PMID:25597246 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G FANCB FA complementation group B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) TreeGrafter
MGI		 PMID:25520194 GO_REF:0000118 NCBI chr  X:10,690,826...11,140,838
Ensembl chr  X:11,095,200...11,141,029 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G RAD21 RAD21 cohesin complex component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:16,337,563...16,368,041
Ensembl chr13:16,338,972...16,368,035 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:19,741,398...19,771,675
Ensembl chr24:19,699,792...19,771,679 		JBrowse link
G RAD51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22778135) Ensembl
MGI		 PMID:22778135 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G REC8 REC8 meiotic recombination protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:4,165,637...4,171,488
Ensembl chr 8:4,165,879...4,171,486 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) Ensembl
MGI		 PMID:25520194 GO_REF:0000107 NCBI chr 9:4,902,753...4,940,442
Ensembl chr 9:4,903,477...4,940,436 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
resolution of DNA recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G RMI1 RecQ mediated genome instability 1 involved_in ISO (PMID:23543748) ComplexPortal PMID:23543748 NCBI chr 1:75,481,650...75,499,284
Ensembl chr 1:75,481,708...75,484,576 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,440,493...31,445,318
Ensembl chr 6:31,441,517...31,445,310 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,262,820...41,290,101
Ensembl chr 5:41,263,017...41,290,100 		JBrowse link
resolution of meiotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:45,461,135...45,465,922
Ensembl chr20:45,461,676...45,465,417 		JBrowse link
G CENPX centromere protein X involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:26,342,419...26,350,561
Ensembl chr 9:26,344,438...26,349,997 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G FANCM FA complementation group M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G HFM1 helicase for meiosis 1 acts_upstream_of_or_within ISO (PMID:23555294) MGI PMID:23555294 NCBI chr 6:57,403,006...57,541,616
Ensembl chr 6:57,403,471...57,534,615 		JBrowse link
G MEIOB meiosis specific with OB-fold involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:39,048,335...39,075,957
Ensembl chr 6:39,048,278...39,076,035 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10385520), (PMID:12217320) Ensembl
MGI		 PMID:10385520 PMID:12217320 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:85,379,378...85,389,175 JBrowse link
G RMI1 RecQ mediated genome instability 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:75,481,650...75,499,284
Ensembl chr 1:75,481,708...75,484,576 		JBrowse link
G SHOC1 shortage in chiasmata 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr11:66,283,093...66,359,674
Ensembl chr11:66,282,572...66,363,922 		JBrowse link
G SHOC1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G TEX11 testis expressed 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18316482) Ensembl
MGI		 PMID:18316482 GO_REF:0000107 NCBI chr  X:54,958,568...55,268,720
Ensembl chr  X:54,958,568...55,268,684 		JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:18,159,521...18,206,413
Ensembl chr23:18,146,095...18,206,287 		JBrowse link
resolution of mitotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,201,540...13,233,028
Ensembl chr17:13,201,777...13,232,120 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
RNA-templated DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TEP1 telomerase associated protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr15:17,716,887...17,748,485
Ensembl chr15:17,716,887...17,764,356 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TERT telomerase reverse transcriptase involved_in IEA GOC
Ensembl		 GO_REF:0000107 GO_REF:0000108 NCBI chr34:11,288,622...11,307,790
Ensembl chr34:11,288,622...11,307,951 		JBrowse link
single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761 		JBrowse link
G APTX aprataxin involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:50,111,003...50,155,937
Ensembl chr11:50,113,073...50,132,284 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,502,777...47,559,012
Ensembl chr 2:47,503,762...47,558,889 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:20097625) UniProt PMID:20097625 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17914460), (PMID:17948061) Ensembl
MGI		 PMID:17914460 PMID:17948061 GO_REF:0000107 NCBI chr 8:61,023,564...61,107,599
Ensembl chr 8:61,024,084...61,107,506 		JBrowse link
G TNP1 transition protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:23,742,875...23,743,417
Ensembl chr37:23,727,538...23,743,365 		JBrowse link
G TNP1 transition protein 1 involved_in IEA Ensembl GO_REF:0000107
G XNDC1 XRCC1 N-terminal domain containing 1 involved_in IEA InterPro GO_REF:0000002
G XRCC1 X-ray repair cross complementing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
somatic cell DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SWAP70 switching B cell complex subunit SWAP70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9642267) Ensembl
MGI		 PMID:9642267 GO_REF:0000107 NCBI chr21:32,910,547...32,985,617
Ensembl chr21:32,910,563...32,984,580 		JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11828012) Ensembl
MGI		 PMID:11828012 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15494304)
(PMID:11828012)
(PMID:14568978)
(PMID:14563316), (PMID:15955838)		 Ensembl
MGI		 PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15238604) TreeGrafter
MGI		 PMID:15238604 GO_REF:0000118 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15238604) Ensembl
MGI		 PMID:15238604 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11828012) Ensembl
MGI		 PMID:11828012 GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within ISO (PMID:15494304) MGI PMID:15494304 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288 		JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743174) Ensembl
MGI		 PMID:12743174 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743174) Ensembl
MGI
TreeGrafter		 PMID:12743174 GO_REF:0000107 GO_REF:0000118 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717433) Ensembl
MGI		 PMID:12717433 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9462507) Ensembl
MGI		 PMID:9462507 GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10911993) Ensembl
MGI		 PMID:10911993 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004 		JBrowse link
t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO PMID:15659580 UniProt PMID:15659580 RGD:10680046 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G SH3PXD2A SH3 and PX domains 2A involved_in IEA InterPro GO_REF:0000002 NCBI chr28:15,936,927...16,165,537
Ensembl chr28:15,943,097...16,117,710 		JBrowse link
G SPDYA speedy/RINGO cell cycle regulator family member A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28031483) Ensembl
MGI		 PMID:28031483 GO_REF:0000107 NCBI chr17:22,708,202...22,742,855
Ensembl chr17:22,708,307...22,742,291 		JBrowse link
G STN1 STN1 subunit of CST complex involved_in IEA InterPro GO_REF:0000002 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:4,221,183...4,223,863
Ensembl chr 8:4,221,269...4,223,512 		JBrowse link
telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15181449) MGI
Ensembl		 PMID:15181449 GO_REF:0000107 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,118,471...36,135,064
Ensembl chr20:36,118,477...36,133,881 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:24703901) BHF-UCL PMID:24703901 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:38,131,956...38,223,888
Ensembl chr23:38,132,788...38,224,016 		JBrowse link
G BLM BLM RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15367665) TreeGrafter
MGI		 PMID:15367665 GO_REF:0000118 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G CCNE1 cyclin E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24586195) Ensembl
MGI		 PMID:24586195 GO_REF:0000107 NCBI chr 1:121,688,622...121,697,533
Ensembl chr 1:121,688,796...121,697,649 		JBrowse link
G CCNE2 cyclin E2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24586195) Ensembl
MGI		 PMID:24586195 GO_REF:0000107 NCBI chr29:39,534,872...39,551,141
Ensembl chr29:39,534,968...39,546,566 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12615897) Ensembl
MGI
TreeGrafter		 PMID:12615897 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G FBXO4 F-box protein 4 involved_in ISO (PMID:16275645) UniProt PMID:16275645 NCBI chr 4:67,620,947...67,664,862
Ensembl chr 4:67,651,275...67,664,915 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:93,596...104,908
Ensembl chr16:93,626...125,597 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr17:48,674,004...48,676,869 JBrowse link
G INO80C INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) ComplexPortal PMID:23979016 MGI:5638510 NCBI chr 7:54,569,954...54,586,902
Ensembl chr 7:54,569,972...54,586,782 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,581,531...14,647,930
Ensembl chr37:14,591,055...14,647,936 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,033,366...18,041,604
Ensembl chr 6:18,033,363...18,041,308 		JBrowse link
G LOC119865601 checkpoint protein HUS1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119877459 checkpoint protein HUS1 involved_in IEA TreeGrafter GO_REF:0000118
G LTO1 LTO1 maturation factor of ABCE1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:48,482,212...48,490,678
Ensembl chr18:48,481,955...48,490,691 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,076,075...5,085,483
Ensembl chr27:5,076,470...5,085,488 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NBN nibrin involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:4,944,278...4,982,377
Ensembl chr 5:4,946,893...4,980,996 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:12707040) MGI PMID:12707040 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21270334) MGI
Ensembl		 PMID:21270334 GO_REF:0000107 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA InterPro GO_REF:0000002 NCBI chr30:29,223,507...29,232,584
Ensembl chr30:29,157,119...29,232,043 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:15010310) GO_Central
MGI
TreeGrafter		 PMID:15010310 GO_REF:0000033 GO_REF:0000118 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA InterPro GO_REF:0000002 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15210109) InterPro
MGI
UniProt		 PMID:15210109 GO_REF:0000002 GO_REF:0000104 NCBI chr24:47,219,977...47,248,791 JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505 		JBrowse link
G SP100 SP100 nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:42,538,428...42,635,825
Ensembl chr25:42,538,571...42,635,649 		JBrowse link
G STN1 STN1 subunit of CST complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G TERF1 telomeric repeat binding factor 1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in
acts_upstream_of
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15968270)
(PMID:15010310)		 Ensembl
MGI
UniProt		 PMID:15010310 PMID:15968270 GO_REF:0000104 GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,090,723...103,098,601
Ensembl chr 1:102,989,360...103,098,573 		JBrowse link
G TNKS2 tankyrase 2 NOT|acts_upstream_of_or_within ISO (PMID:16507985)
(PMID:16507984)		 MGI PMID:16507984 PMID:16507985 NCBI chr28:6,286,125...6,354,284
Ensembl chr28:6,285,690...6,352,317 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G WRN WRN RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12707040)
(PMID:15235603)
(PMID:15367665)		 Ensembl
MGI
TreeGrafter		 PMID:12707040 PMID:15235603 PMID:15367665 GO_REF:0000107 GO_REF:0000118 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
G ZNF827 zinc finger protein 827 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:44,300,109...44,469,337
Ensembl chr15:44,303,300...44,468,680 		JBrowse link
telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 involved_in ISO (PMID:28216226) UniProt PMID:28216226 NCBI chr10:300,863...306,546
Ensembl chr10:300,903...305,438 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISO (PMID:28216226) UniProt PMID:28216226 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chr24:47,219,977...47,248,791 JBrowse link
telomere maintenance via base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:24703901) BHF-UCL PMID:24703901 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA2 BRCA2 DNA repair associated involved_in ISO (MGI:5707585|PMID:21076401) BHF-UCL PMID:21076401 MGI:5707585 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,078,143...23,288,302
Ensembl chr13:23,078,173...23,288,304 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in ISO (PMID:17589526) UniProt PMID:17589526 NCBI chr 1:87,192,988...87,285,678
Ensembl chr 1:87,194,867...87,285,606 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,132,945...13,201,214
Ensembl chr17:13,133,236...13,201,759 		JBrowse link
G TEP1 telomerase associated protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:17,716,887...17,748,485
Ensembl chr15:17,716,887...17,764,356 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:870,405...876,937
Ensembl chr10:870,392...909,161 		JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:122,838,787...122,850,870
Ensembl chr  X:122,838,645...122,850,884 		JBrowse link
G GAR1 GAR1 ribonucleoprotein involved_in ISO (PMID:29695869) UniProt PMID:29695869 NCBI chr32:29,995,710...30,004,545
Ensembl chr32:29,996,148...30,004,536 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:10197982) Ensembl
BHF-UCL		 PMID:10197982 GO_REF:0000107 NCBI chr 8:70,091,203...70,096,107
Ensembl chr 8:70,092,217...70,095,243 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:10197982) Ensembl
BHF-UCL		 PMID:10197982 GO_REF:0000107 NCBI chr12:12,658,415...12,664,945
Ensembl chr12:12,660,008...12,664,940 		JBrowse link
G LOC100687242 heat shock protein HSP 90-beta-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:7,591,965...7,594,265 JBrowse link
G NHP2 NHP2 ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,389,549...3,393,010
Ensembl chr11:3,389,591...3,395,313 		JBrowse link
G NOP10 NOP10 ribonucleoprotein involved_in ISO (PMID:29695869) UniProt PMID:29695869 NCBI chr30:766,801...767,615
Ensembl chr30:766,853...767,613 		JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 NOT|acts_upstream_of_or_within ISO (PMID:15169895) MGI PMID:15169895 NCBI chr25:18,447,413...18,544,990
Ensembl chr25:18,447,413...18,544,777 		JBrowse link
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 acts_upstream_of_or_within ISO (PMID:11701125) MGI PMID:11701125 NCBI chr25:27,090,244...27,182,377
Ensembl chr25:27,021,704...27,181,968 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:10197982) TreeGrafter
BHF-UCL		 PMID:10197982 GO_REF:0000118 NCBI chr10:885,744...903,814
Ensembl chr10:870,392...909,161 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
G RPA1 replication protein A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G TELO2 telomere maintenance 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:39,309,224...39,320,215
Ensembl chr 6:39,310,466...39,359,491 		JBrowse link
G TEP1 telomerase associated protein 1 NOT|acts_upstream_of_or_within ISO (PMID:15169895) MGI PMID:15169895 NCBI chr15:17,716,887...17,748,485
Ensembl chr15:17,716,887...17,764,356 		JBrowse link
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERT telomerase reverse transcriptase involved_in ISS
IBA
IEA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr34:11,288,622...11,307,790
Ensembl chr34:11,288,622...11,307,951 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,574,153...32,586,222
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22531781) Ensembl
MGI
TreeGrafter		 PMID:22531781 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (PMID:24012755) BHF-UCL PMID:24012755 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G STN1 STN1 subunit of CST complex involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
G ZBTB48 zinc finger and BTB domain containing 48 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:60,406,145...60,413,532
Ensembl chr 5:60,406,700...60,413,492 		JBrowse link
telomere maintenance via telomere trimming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:71,441,732...71,452,922
Ensembl chr 8:71,442,429...71,449,408 		JBrowse link
telomeric 3' overhang formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819 		JBrowse link
telomeric D-loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (PMID:24012755) BHF-UCL PMID:24012755 NCBI chr 6:18,171,190...18,174,577 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,648,297...37,666,584
Ensembl chr 6:37,647,976...37,703,190 		JBrowse link
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
telomeric DNA-containing double minutes formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in ISO (MGI:3758502|PMID:14690602) BHF-UCL PMID:14690602 MGI:3758502 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
telomeric loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:47,219,977...47,248,791 JBrowse link
telomeric loop formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,711,267...51,716,806
Ensembl chr17:51,711,284...51,716,345 		JBrowse link
G POT1 protection of telomeres 1 NOT|involved_in ISO (MGI:5883205|PMID:24120135) BHF-UCL PMID:24120135 MGI:5883205 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G TERF1 telomeric repeat binding factor 1 NOT|involved_in ISO (MGI:5883205|PMID:24120135) BHF-UCL PMID:24120135 MGI:5883205 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,310,911...23,344,083
Ensembl chr19:23,310,986...23,337,683 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:16246722) UniProt PMID:16246722 NCBI chr22:52,339,011...52,372,618 JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12509265), (PMID:9150142) RGD
MGI
TreeGrafter
Ensembl		 PMID:9150142 PMID:12509265 PMID:31644904 GO_REF:0000107 GO_REF:0000118 RGD:126925983 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162 		JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:56,239,820...56,260,384
Ensembl chr  X:56,239,850...56,260,759 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:70,793,975...70,918,151
Ensembl chr 1:70,835,410...70,917,962 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12732143) MGI
TreeGrafter
Ensembl
InterPro		 PMID:12732143 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:47,502,777...47,559,012
Ensembl chr 2:47,503,762...47,558,889 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:12660172) MGI PMID:12660172 NCBI chr31:34,275,400...34,283,373
Ensembl chr31:34,275,839...34,282,340 		JBrowse link
G POLR2I RNA polymerase II subunit I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:116,586,022...116,587,551
Ensembl chr 1:116,586,329...116,587,550 		JBrowse link
G RAD54B RAD54 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:39,096,680...39,195,054
Ensembl chr29:39,098,098...39,195,112 		JBrowse link
G RAD54L RAD54 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:14,111,168...14,139,819
Ensembl chr15:14,111,157...14,139,301 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,277,328...33,315,601
Ensembl chr 6:33,277,444...33,314,491 		JBrowse link
G UVSSA UV stimulated scaffold protein A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:62,647,992...62,674,830
Ensembl chr 3:62,649,207...62,674,884 		JBrowse link
G XAB2 XPA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997 		JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:10,323,842...10,368,529
Ensembl chr 7:10,323,559...10,369,560 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,114,784...57,122,854 JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr30:28,832,388...28,846,824 JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G POLI DNA polymerase iota involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17114294) TreeGrafter
MGI		 PMID:17114294 GO_REF:0000118 NCBI chr 1:21,162,657...21,188,328
Ensembl chr 1:21,163,140...21,187,947 		JBrowse link
G POLN DNA polymerase nu involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,946,295...62,104,112
Ensembl chr 3:61,962,193...62,102,264 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:45,861,244...45,920,183
Ensembl chr16:45,856,042...45,918,761 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr12:67,776,285...67,953,337
Ensembl chr12:67,756,924...67,953,553 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,120,151...8,133,402
Ensembl chr 4:8,120,351...8,133,191 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,933,721...38,959,306
Ensembl chr 8:38,933,805...38,959,306 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:27,154,283...27,190,947
Ensembl chr24:27,153,314...27,179,191 		JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:92,489,981...92,538,199
Ensembl chr  X:92,491,114...92,537,672 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,354,201...42,378,463
Ensembl chr18:42,354,572...42,377,947 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G H2AC25 H2A clustered histone 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:604,444...605,584
Ensembl chr14:604,505...604,897 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,100,536...8,229,868
Ensembl chr30:8,101,934...8,202,025 		JBrowse link
G LOC483061 DNA excision repair protein ERCC-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:36,535,679...36,536,408 JBrowse link
G MC1R melanocortin 1 receptor involved_in ISO (PMID:18292087) BHF-UCL PMID:18292087 NCBI chr 5:63,694,296...63,695,249 JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:20670893) CACAO PMID:20670893 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836881) Ensembl
MGI		 PMID:23836881 GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 involved_in ISO (MGI:5314150|PMID:22157821) UniProt PMID:22157821 MGI:5314150 NCBI chr20:38,109,974...38,187,621
Ensembl chr20:38,125,078...38,187,107 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836881) Ensembl
MGI		 PMID:23836881 GO_REF:0000107 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:9166431) UniProt PMID:9166431 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G LIG1 DNA ligase 1 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953 		JBrowse link
G LIG3 DNA ligase 3 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10716994)
(PMID:15194694)		 Ensembl
MGI		 PMID:10716994 PMID:15194694 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:23836881) MGI PMID:23836881 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2360047) UniProt
MGI
TreeGrafter
Ensembl
InterPro		 PMID:2360047 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr18:31,628,231...31,639,980
Ensembl chr18:31,630,737...31,641,660 		JBrowse link
G RAG2 recombination activating 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2360047) Ensembl
MGI
TreeGrafter		 PMID:2360047 GO_REF:0000107 GO_REF:0000118 NCBI chr18:31,614,143...31,621,489
Ensembl chr18:31,618,481...31,620,064 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      primary metabolic process 9574
        nucleobase-containing compound metabolic process 5439
          nucleic acid metabolic process 4871
            DNA metabolic process 941
              DNA biosynthetic process + 171
              DNA catabolic process + 34
              DNA double-strand break processing + 24
              DNA excision + 0
              DNA integration 7
              DNA ligation + 12
              DNA modification + 29
              DNA protection 5
              DNA recombination + 336
              DNA repair + 526
              DNA replication + 264
              DNA replication initiation + 32
              DNA replication termination + 1
              DNA replication, Okazaki fragment processing + 2
              DNA strand displacement + 1
              DNA strand elongation + 35
              DNA strand invasion + 7
              DNA strand resection involved in replication fork processing + 8
              DNA topological change 7
              DNA-templated DNA replication maintenance of fidelity + 55
              G-quadruplex DNA formation 1
              base-excision repair, AP site formation + 5
              base-excision repair, gap-filling 6
              chromosomal 5-methylcytosine DNA demethylation pathway + 0
              formation of extrachromosomal circular DNA + 8
              gap filling involved in double-strand break repair via nonhomologous end joining 0
              heteroduplex formation + 0
              lagging strand initiation 0
              maintenance of DNA repeat elements + 7
              meiotic DNA double-strand break formation + 10
              mitochondrial DNA metabolic process + 27
              negative regulation of DNA metabolic process + 148
              nucleotide-excision repair, DNA gap filling 6
              plastid DNA metabolic process + 0
              positive regulation of DNA metabolic process + 286
              regulation of DNA metabolic process + 465
              removal of nonhomologous ends + 1
              resolution of DNA recombination intermediates + 6
              telomere maintenance + 147
Path 2
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      organic substance metabolic process 10554
        organic cyclic compound metabolic process 5907
          nucleobase-containing compound metabolic process 5439
            nucleic acid metabolic process 4871
              DNA metabolic process 941
                DNA biosynthetic process + 171
                DNA catabolic process + 34
                DNA double-strand break processing + 24
                DNA excision + 0
                DNA integration 7
                DNA ligation + 12
                DNA modification + 29
                DNA protection 5
                DNA recombination + 336
                DNA repair + 526
                DNA replication + 264
                DNA replication initiation + 32
                DNA replication termination + 1
                DNA replication, Okazaki fragment processing + 2
                DNA strand displacement + 1
                DNA strand elongation + 35
                DNA strand invasion + 7
                DNA strand resection involved in replication fork processing + 8
                DNA topological change 7
                DNA-templated DNA replication maintenance of fidelity + 55
                G-quadruplex DNA formation 1
                base-excision repair, AP site formation + 5
                base-excision repair, gap-filling 6
                chromosomal 5-methylcytosine DNA demethylation pathway + 0
                formation of extrachromosomal circular DNA + 8
                gap filling involved in double-strand break repair via nonhomologous end joining 0
                heteroduplex formation + 0
                lagging strand initiation 0
                maintenance of DNA repeat elements + 7
                meiotic DNA double-strand break formation + 10
                mitochondrial DNA metabolic process + 27
                negative regulation of DNA metabolic process + 148
                nucleotide-excision repair, DNA gap filling 6
                plastid DNA metabolic process + 0
                positive regulation of DNA metabolic process + 286
                regulation of DNA metabolic process + 465
                removal of nonhomologous ends + 1
                resolution of DNA recombination intermediates + 6
                telomere maintenance + 147
paths to the root