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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine nucleotide catabolic process
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Accession:GO:0006244 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: pyrimidine nucleotide breakdown;   pyrimidine nucleotide catabolism;   pyrimidine nucleotide degradation


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dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 IEA UniProt GO_REF:0000104 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial IEA Ensembl GO_REF:0000107 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 1:123,451,207...123,462,267
Ensembl chr 1:123,451,212...123,462,232
JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 IEA Ensembl GO_REF:0000107 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057
JBrowse link
UMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYS dihydropyrimidinase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16552
    cellular process 15783
      cellular metabolic process 9459
        cellular nitrogen compound metabolic process 5615
          cellular nitrogen compound catabolic process 393
            pyrimidine-containing compound catabolic process 24
              pyrimidine nucleotide catabolic process 6
                pyrimidine deoxyribonucleotide catabolic process + 4
                pyrimidine ribonucleotide catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 16552
    metabolic process 10502
      cellular metabolic process 9459
        cellular aromatic compound metabolic process 5087
          nucleobase-containing compound metabolic process 4900
            nucleobase-containing small molecule metabolic process 506
              nucleoside phosphate metabolic process 439
                nucleotide metabolic process 431
                  pyrimidine nucleotide metabolic process 36
                    pyrimidine nucleotide catabolic process 6
                      pyrimidine deoxyribonucleotide catabolic process + 4
                      pyrimidine ribonucleotide catabolic process + 2
paths to the root