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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine nucleotide catabolic process
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Accession:GO:0006244 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: pyrimidine nucleotide breakdown;   pyrimidine nucleotide catabolism;   pyrimidine nucleotide degradation


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dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chr16:24,538,023...24,545,426
Ensembl chr16:30,794,268...30,802,179
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chr16:24,538,023...24,545,426
Ensembl chr16:30,794,268...30,802,179
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5M 5',3'-nucleotidase, mitochondrial ISO (MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:2388903 NCBI chr17:33,948,270...33,991,485 JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase ISO RGD PMID:1315924, PMID:3032103 RGD:2300191, RGD:2301218 NCBI chr15:27,280,025...27,292,003
Ensembl chr15:45,603,807...45,616,022
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pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic ISO (PMID:10681516) UniProtKB PMID:10681516 NCBI chr17:69,077,021...69,078,998 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 ISO (PMID:9556635) UniProtKB PMID:9556635 NCBI chr 8:22,678,746...22,707,408
Ensembl chr 8:19,571,337...19,635,150
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    cellular process 11671
      cellular metabolic process 7331
        cellular nitrogen compound metabolic process 4224
          cellular nitrogen compound catabolic process 304
            pyrimidine-containing compound catabolic process 17
              pyrimidine nucleotide catabolic process 5
                pyrimidine deoxyribonucleotide catabolic process + 4
                pyrimidine ribonucleotide catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 12566
    metabolic process 7977
      cellular metabolic process 7331
        cellular aromatic compound metabolic process 3867
          nucleobase-containing compound metabolic process 3702
            nucleobase-containing small molecule metabolic process 377
              nucleoside phosphate metabolic process 329
                nucleotide metabolic process 319
                  pyrimidine nucleotide metabolic process 19
                    pyrimidine nucleotide catabolic process 5
                      pyrimidine deoxyribonucleotide catabolic process + 4
                      pyrimidine ribonucleotide catabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.