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ONTOLOGY REPORT - ANNOTATIONS

Term:UMP biosynthetic process
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Accession:GO:0006222 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate.
Synonyms:exact_synonym: UMP anabolism;   UMP biosynthesis;   UMP formation;   UMP synthesis


show annotations for term's descendants           Sort by:
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase involved_in IDA
ISO		 (PMID:11730338), (PMID:18184586), (PMID:6893554), (PMID:9042911) RGD PMID:6893554 PMID:9042911 PMID:11730338 PMID:18184586 PMID:6134725 RGD:5132277 NCBI chr11:80,311,269...80,321,678
Ensembl chr11:66,806,045...66,821,903 		JBrowse link
G Uprt uracil phosphoribosyltransferase homolog IDA RGD PMID:1476792 RGD:5132591 NCBI chr  X:69,516,573...69,546,811
Ensembl chr  X:69,516,738...69,546,797 		JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA
ISO		 GO_REF:0000041
GO_REF:0000107
(PMID:33771897)
(PMID:25678555)		 UniProt
Ensembl
RGD		 PMID:25678555 PMID:33771897 GO_REF:0000041 GO_REF:0000107 NCBI chr 6:31,012,091...31,035,098
Ensembl chr 6:25,292,133...25,319,861 		JBrowse link
G Dhodh dihydroorotate dehydrogenase involved_in IEA
ISO		 GO_REF:0000041
(PMID:30449682), (PMID:6249586)		 UniProt
RGD		 PMID:6249586 PMID:30449682 GO_REF:0000041 NCBI chr19:54,460,636...54,483,049
Ensembl chr19:37,558,177...37,591,654 		JBrowse link
G Umps uridine monophosphate synthetase involved_in IEA
ISO		 GO_REF:0000041
GO_REF:0000002
(PMID:2419341), (PMID:6154574)		 UniProt
InterPro
RGD		 PMID:2419341 PMID:6154574 GO_REF:0000002 GO_REF:0000041 NCBI chr11:80,311,269...80,321,678
Ensembl chr11:66,806,045...66,821,903 		JBrowse link
UMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in ISO
IEA		 (PMID:6498945)
GO_REF:0000107		 RGD
Ensembl		 PMID:6498945 GO_REF:0000107 NCBI chr 5:150,556,615...150,583,231
Ensembl chr 5:150,556,615...150,583,231 		JBrowse link
G Uck1 uridine-cytidine kinase 1 involved_in IEA
ISO		 GO_REF:0000041
(PMID:11306702)
(PMID:8951040)		 UniProt
RGD		 PMID:8951040 PMID:11306702 GO_REF:0000041 NCBI chr 3:35,936,328...35,942,213
Ensembl chr 3:15,538,591...15,544,465 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA
ISS
ISO		 GO_REF:0000041
GO_REF:0000024
(PMID:11306702), (PMID:27239701)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11306702 PMID:27239701 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr13:81,913,732...81,971,036
Ensembl chr13:79,383,846...79,438,352 		JBrowse link
G Uckl1 uridine-cytidine kinase 1-like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:189,052,365...189,064,939
Ensembl chr 3:168,674,849...168,698,091 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IEA
ISO		 GO_REF:0000041
(PMID:11956089)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11956089 GO_REF:0000041 GO_REF:0000107 NCBI chr14:88,023,155...88,043,036
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:63,681,671...63,726,194
Ensembl chr 3:43,273,048...43,317,417 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        pyrimidine-containing compound metabolic process 76
          pyrimidine nucleotide metabolic process 51
            pyrimidine nucleotide biosynthetic process 37
              pyrimidine ribonucleotide biosynthetic process 25
                UMP biosynthetic process 10
                  'de novo' UMP biosynthetic process 3
                  UMP salvage 6
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        primary metabolic process 10763
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 733
              nucleoside phosphate metabolic process 699
                nucleoside monophosphate metabolic process 94
                  nucleoside monophosphate biosynthetic process 54
                    pyrimidine nucleoside monophosphate biosynthetic process 19
                      pyrimidine ribonucleoside monophosphate biosynthetic process 11
                        UMP biosynthetic process 10
                          'de novo' UMP biosynthetic process 3
                          UMP salvage 6
paths to the root