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ONTOLOGY REPORT - ANNOTATIONS


Term:5-methylcytosine catabolic process
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Accession:GO:0006211 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of 5-methylcytosine, a methylated base of DNA.
Synonyms:exact_synonym: 5-methylcytosine breakdown;   5-methylcytosine catabolism;   5-methylcytosine degradation


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5-methylcytosine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tet1 tet methylcytosine dioxygenase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr20:27,359,122...27,438,039
Ensembl chr20:27,366,213...27,437,427
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO (PMID:24315485) RGD PMID:24315485 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 4:115,060,702...115,160,800
Ensembl chr 4:115,066,309...115,157,263
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    cellular process 18859
      cellular metabolic process 11041
        cellular catabolic process 2172
          aromatic compound catabolic process 448
            5-methylcytosine catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 20045
    cellular process 18859
      cellular metabolic process 11041
        cellular catabolic process 2172
          cellular nitrogen compound catabolic process 437
            pyrimidine-containing compound catabolic process 32
              5-methylcytosine catabolic process 3
paths to the root