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ONTOLOGY REPORT - ANNOTATIONS


Term:IMP biosynthetic process
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Accession:GO:0006188 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate.
Synonyms:exact_synonym: IMP anabolism;   IMP biosynthesis;   IMP formation;   IMP synthesis


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IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:190,598,707...190,619,938
Ensembl chr 2:190,598,700...190,619,938
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
SGD:S000004498 (PMID:23911318)
MGI:5490144 (MGI:5506958|PMID:23911318)
RGD PMID:23911318 PMID:21873635 MGI:5506958, RGD:13792537 NCBI chr 2:195,707,609...195,720,454
Ensembl chr 2:195,707,610...195,720,271
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5529271 (MGI:5506958|PMID:23911318), (MGI:5512796|PMID:23542464), (MGI:5529149|PMID:23078545), (MGI:87193|PMID:9133604)
RGD PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 PMID:21873635 MGI:5506958 MGI:5512796 MGI:5529149 MGI:87193, RGD:13792537 NCBI chr 1:164,884,823...164,929,899
Ensembl chr 1:164,885,320...164,929,887
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07036855.1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 Ensembl chr  X:4,032,895...4,033,896 JBrowse link
G Adsl adenylosuccinate lyase involved_in IEA
ISO
GO_REF:0000041
(MGI:6718249|PMID:6480832)
UniProt
RGD
PMID:6480832 GO_REF:0000041 MGI:6718249 NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IDA
ISO
IEA
IBA
(MGI:6717337|PMID:26144885)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:26144885 PMID:9332377 PMID:21873635 GO_REF:0000041 MGI:6717337, RGD:70804, RGD:13792537 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA
ISO
GO_REF:0000041
(MGI:64690|PMID:8299947)
UniProt
RGD
PMID:8299947 GO_REF:0000041 MGI:64690 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:31,199,086...31,232,731
Ensembl chr14:31,173,541...31,232,635
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:53,690,301...53,711,811
Ensembl chr10:53,691,626...53,708,420
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in IEA
ISO
GO_REF:0000041
(MGI:6718248|PMID:6327016)
UniProt
RGD
PMID:6327016 GO_REF:0000041 MGI:6718248 NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144
JBrowse link
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 involved_in IEA
ISO
GO_REF:0000041
MGI:6157956 (MGI:6152543|PMID:27896074)
UniProt
RGD
PMID:27896074 GO_REF:0000041 MGI:6152543 NCBI chr 2:190,598,707...190,619,938
Ensembl chr 2:190,598,700...190,619,938
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in IEA
ISO
GO_REF:0000041
MGI:5490144 (MGI:5489878|PMID:22212473)
UniProt
RGD
PMID:22212473 GO_REF:0000041 MGI:5489878 NCBI chr 2:195,707,609...195,720,454
Ensembl chr 2:195,707,610...195,720,271
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in IEA
ISO
GO_REF:0000041
(MGI:5585332|PMID:24940686)
UniProt
RGD
PMID:24940686 GO_REF:0000041 MGI:5585332 NCBI chr 1:164,884,823...164,929,899
Ensembl chr 1:164,885,320...164,929,887
JBrowse link
G Aprt adenine phosphoribosyl transferase involved_in ISO
IEA
MGI:2654615 (MGI:1312996|PMID:9776749)
GO_REF:0000107
RGD
Ensembl
PMID:9776749 GO_REF:0000107 MGI:1312996 NCBI chr19:50,626,436...50,628,404
Ensembl chr19:50,626,202...50,628,431
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA
ISO
IBA
GO_REF:0000041
MGI:1857299 (MGI:1331314|PMID:10037486), (MGI:85965|PMID:8878108)
PMID:21873635
UniProt
RGD
PMID:8878108 PMID:10037486 PMID:21873635 GO_REF:0000041 MGI:1331314 MGI:85965, RGD:13792537 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154
JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:83,548,792...83,654,852
Ensembl chr17:83,548,803...83,655,179
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      organic substance metabolic process 11335
        organic substance biosynthetic process 5972
          carbohydrate derivative biosynthetic process 576
            ribose phosphate biosynthetic process 187
              ribonucleotide biosynthetic process 180
                purine ribonucleotide biosynthetic process 166
                  IMP biosynthetic process 13
                    'de novo' IMP biosynthetic process 7
                    IMP salvage 6
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      cellular metabolic process 10721
        cellular aromatic compound metabolic process 5598
          nucleobase-containing compound metabolic process 5380
            nucleobase-containing small molecule metabolic process 577
              nucleoside phosphate metabolic process 510
                nucleotide metabolic process 502
                  purine nucleotide metabolic process 426
                    purine ribonucleotide metabolic process 400
                      IMP metabolic process 22
                        IMP biosynthetic process 13
                          'de novo' IMP biosynthetic process 7
                          IMP salvage 6
paths to the root