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ONTOLOGY REPORT - ANNOTATIONS


Term:AMP biosynthetic process
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Accession:GO:0006167 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate.
Synonyms:exact_synonym: AMP anabolism;   AMP biosynthesis;   AMP formation;   AMP synthesis



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AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034673.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Adsl adenylosuccinate lyase involved_in IDA
ISO
(PMID:11428554) RGD PMID:11428554 PMID:3759987 RGD:5135303 NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760
JBrowse link
G Adss adenylosuccinate synthase involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
RGD PMID:2004783 PMID:8308018 MGI:64874 NCBI chr13:89,769,240...89,799,577
Ensembl chr13:89,769,244...89,799,604
JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) RGD PMID:15786719 NCBI chr 6:131,679,795...131,702,012
Ensembl chr 6:131,679,701...131,701,998
JBrowse link
G LOC100910067 bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Nudt2 nudix hydrolase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:56,628,265...56,643,104
Ensembl chr 5:56,628,265...56,643,104
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 IDA RGD PMID:2546925 RGD:5134985 NCBI chr  X:104,132,139...104,154,191
Ensembl chr  X:104,132,141...104,154,187
JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 IDA RGD PMID:2546925 RGD:5134985 NCBI chr  X:26,975,915...27,013,184
Ensembl chr  X:26,976,061...27,013,181
JBrowse link
'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in IBA
ISO
IEA
PMID:21873635
(PMID:27590927)
(MGI:6718247|PMID:5891253), (MGI:6718249|PMID:6480832)
GO_REF:0000041
RGD
UniProt
PMID:5891253 PMID:6480832 PMID:27590927 PMID:21873635 PMID:21873635 GO_REF:0000041 MGI:6718247 MGI:6718249, RGD:13792537, RGD:13792537 NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760
JBrowse link
G Adss adenylosuccinate synthase involved_in IBA
ISO
IEA
PMID:21873635
(MGI:6718249|PMID:6480832)
GO_REF:0000041
RGD
UniProt
PMID:6480832 PMID:21873635 PMID:21873635 GO_REF:0000041 MGI:6718249, RGD:13792537, RGD:13792537 NCBI chr13:89,769,240...89,799,577
Ensembl chr13:89,769,244...89,799,604
JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 PMID:21873635 GO_REF:0000041, RGD:13792537, RGD:13792537 NCBI chr 6:131,679,795...131,702,012
Ensembl chr 6:131,679,701...131,701,998
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (MGI:6717337|PMID:26144885)
(PMID:26588576)
RGD PMID:26144885 PMID:26588576 MGI:6717337 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (MGI:64690|PMID:8299947)
(PMID:2183217)
RGD PMID:2183217 PMID:8299947 MGI:64690 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) RGD PMID:27590927 NCBI chr14:31,199,086...31,232,731
Ensembl chr14:31,173,541...31,232,635
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in ISO
IEA
(PMID:27590927)
GO_REF:0000107
RGD
Ensembl
PMID:27590927 GO_REF:0000107 NCBI chr10:53,690,301...53,711,811
Ensembl chr10:53,691,626...53,708,420
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (MGI:6718248|PMID:6327016) RGD PMID:6327016 MGI:6718248 NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144
JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:6478860|PMID:8064675) RGD PMID:8064675 MGI:6478860 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adk adenosine kinase involved_in IEA
ISO
GO_REF:0000041
(MGI:6715203|PMID:819300), (MGI:6715204|PMID:6978152)
UniProt
RGD
PMID:819300 PMID:6978152 GO_REF:0000041 MGI:6715203 MGI:6715204 NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510
JBrowse link
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6751570|PMID:25681585) RGD PMID:25681585 MGI:6751570 NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760
JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (MGI:6751570|PMID:25681585) RGD PMID:25681585 MGI:6751570 NCBI chr 6:131,679,795...131,702,012
Ensembl chr 6:131,679,701...131,701,998
JBrowse link
G Aprt adenine phosphoribosyl transferase involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
MGI:2429961 (MGI:85816|PMID:8864750)
MGI:2429961|MGI:2654615 (MGI:1312996|PMID:9776749), (MGI:6730049|PMID:718989), (MGI:85816|PMID:8864750)
UniProt
RGD
PMID:718989 PMID:8864750 PMID:9776749 PMID:21873635 PMID:21873635 GO_REF:0000041 MGI:1312996 MGI:6730049 MGI:85816, RGD:13792537, RGD:13792537 NCBI chr19:50,626,436...50,628,404
Ensembl chr19:50,626,202...50,628,431
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (MGI:1331314|PMID:10037486), (MGI:6478860|PMID:8064675), (MGI:6751570|PMID:25681585) RGD PMID:8064675 PMID:10037486 PMID:25681585 MGI:1331314 MGI:6478860 MGI:6751570 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19541
    metabolic process 11844
      organic substance metabolic process 11378
        organic substance biosynthetic process 5998
          carbohydrate derivative biosynthetic process 584
            ribose phosphate biosynthetic process 188
              ribonucleotide biosynthetic process 181
                purine ribonucleotide biosynthetic process 167
                  AMP biosynthetic process 17
                    'de novo' AMP biosynthetic process 8
                    AMP salvage 6
Path 2
Term Annotations click to browse term
  biological_process 19541
    metabolic process 11844
      cellular metabolic process 10738
        cellular aromatic compound metabolic process 5645
          nucleobase-containing compound metabolic process 5420
            nucleobase-containing small molecule metabolic process 572
              nucleoside phosphate metabolic process 505
                nucleotide metabolic process 497
                  purine nucleotide metabolic process 421
                    purine ribonucleotide metabolic process 396
                      AMP metabolic process 31
                        AMP biosynthetic process 17
                          'de novo' AMP biosynthetic process 8
                          AMP salvage 6
paths to the root