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ONTOLOGY REPORT - ANNOTATIONS


Term:purine nucleobase catabolic process
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Accession:GO:0006145 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.
Synonyms:exact_synonym: purine base breakdown;   purine base catabolic process;   purine base catabolism;   purine base degradation


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purine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO
IEA
(PMID:11988088)
GO_REF:0000107
RGD
Ensembl
PMID:11988088 GO_REF:0000107 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Uox urate oxidase TAS RGD PMID:3182808 RGD:730101 NCBI chr 2:252,452,282...252,488,497
Ensembl chr 2:252,452,269...252,488,396
JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA
ISO
GO_REF:0000041
(MGI:6478860|PMID:8064675)
UniProt
RGD
PMID:8064675 GO_REF:0000041 MGI:6478860 NCBI chr 1:238,982,542...239,057,663
Ensembl chr 1:238,982,392...239,057,732
JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:252,452,282...252,488,497
Ensembl chr 2:252,452,269...252,488,396
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IDA
IEA
(MGI:49329|PMID:1590774)
PMID:3443108
GO_REF:0000107
RGD
Ensembl
PMID:1590774, PMID:3443108 GO_REF:0000107 MGI:49329, RGD:42721989 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:252,452,282...252,488,497
Ensembl chr 2:252,452,269...252,488,396
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA
IEA
ISO
PMID:3443108
GO_REF:0000107
(PMID:1619276)
(MGI:49329|PMID:1590774), (MGI:6306257|PMID:30936145)
Ensembl
RGD
PMID:1590774 PMID:1619276 PMID:30936145, PMID:232638, PMID:3443108 GO_REF:0000107 MGI:49329 MGI:6306257, RGD:13210503, RGD:42721989 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
xanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:252,452,282...252,488,497
Ensembl chr 2:252,452,269...252,488,396
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IDA
IBA
ISS
IEA
(PMID:17301077), (PMID:8670112)
PMID:3443108
PMID:21873635
(MGI:49329|PMID:1590774)
PMID:15878860
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:1590774 PMID:8670112 PMID:17301077, PMID:3443108, PMID:21873635, PMID:15878860 GO_REF:0000024 GO_REF:0000107 MGI:49329, RGD:42721989, RGD:13792537, RGD:8553512 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      small molecule metabolic process 1790
        nucleobase-containing small molecule metabolic process 577
          nucleobase metabolic process 45
            purine nucleobase metabolic process 23
              purine nucleobase catabolic process 5
                adenine catabolic process 0
                anaerobic purine nucleobase catabolic process 0
                guanine catabolic process 4
                hypoxanthine catabolic process 3
                xanthine catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      cellular metabolic process 10755
        cellular aromatic compound metabolic process 5636
          nucleobase-containing compound metabolic process 5420
            nucleobase-containing small molecule metabolic process 577
              nucleobase metabolic process 45
                purine nucleobase metabolic process 23
                  purine nucleobase catabolic process 5
                    adenine catabolic process 0
                    anaerobic purine nucleobase catabolic process 0
                    guanine catabolic process 4
                    hypoxanthine catabolic process 3
                    xanthine catabolic process 3
paths to the root