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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of nucleotide metabolic process
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Accession:GO:0006140 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.
Synonyms:exact_synonym: regulation of nucleotide metabolism


show annotations for term's descendants           Sort by:
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IMP RGD PMID:21325440 RGD:9685453 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
G Mir675 microRNA 675 acts_upstream_of ISO (PMID:31574452) RGD PMID:31574452 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
IEA 		(PMID:24289924)
GO_REF:0000107 		RGD
Ensembl		 PMID:24289924 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO
IEA 		(PMID:20165904)
GO_REF:0000107 		RGD
Ensembl		 PMID:20165904 GO_REF:0000107 NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044 		JBrowse link
negative regulation of ATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fis1 fission, mitochondrial 1 involved_in ISO
IEA 		(PMID:32521232)
GO_REF:0000107 		RGD
Ensembl		 PMID:32521232 GO_REF:0000107 NCBI chr12:25,345,239...25,360,135
Ensembl chr12:19,708,558...19,723,377 		JBrowse link
G Tspo translocator protein involved_in ISO
IEA 		(PMID:25470454)
GO_REF:0000107 		RGD
Ensembl		 PMID:25470454 GO_REF:0000107 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450 		JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO
IEA 		(PMID:17828264)
GO_REF:0000107 		RGD
Ensembl		 PMID:17828264 GO_REF:0000107 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO
IEA 		(PMID:23840896)
GO_REF:0000107 		RGD
Ensembl		 PMID:23840896 GO_REF:0000107 NCBI chr19:67,584,319...67,658,533
Ensembl chr19:50,680,729...50,749,610 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 acts_upstream_of_or_within ISO
IEA 		(PMID:20176937)
GO_REF:0000107 		RGD
Ensembl		 PMID:20176937 GO_REF:0000107 NCBI chr20:28,434,938...28,437,037
Ensembl chr20:27,891,998...27,894,105 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19881551), (PMID:25043030) 		UniProt
Ensembl
RGD		 PMID:19881551 PMID:25043030 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,212,941...2,235,749
Ensembl chr17:2,208,031...2,230,071 		JBrowse link
G Flcn folliculin involved_in ISO
IEA 		(PMID:34381247)
GO_REF:0000107 		RGD
Ensembl		 PMID:34381247 GO_REF:0000107 NCBI chr10:45,088,164...45,107,581
Ensembl chr10:44,588,624...44,607,769 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:32460388)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:19109424) 		Ensembl
RGD		 PMID:19109424 GO_REF:0000107 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO
IEA 		MGI:3773690 (PMID:19096392)
GO_REF:0000107 		RGD
Ensembl		 PMID:19096392 GO_REF:0000107 NCBI chr20:2,933,173...2,934,377
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO MGI:2449949|MGI:5566664 (PMID:26219591) RGD PMID:26219591 NCBI chr 3:76,830,549...76,850,189
Ensembl chr 3:76,830,413...76,850,189 		JBrowse link
G Myog myogenin IDA RGD PMID:10225962 RGD:9686132 NCBI chr13:48,297,476...48,300,065
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO (PMID:19955185) RGD PMID:19955185 NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO
IEA
ISS 		(PMID:30451898)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:30451898 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO
IEA 		(PMID:19955185)
GO_REF:0000107 		RGD
Ensembl		 PMID:19955185 GO_REF:0000107 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IMP RGD PMID:22343369 RGD:7242186 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Sik2 salt-inducible kinase 2 involved_in ISO (PMID:21084751) RGD PMID:21084751 NCBI chr 8:51,225,543...51,325,343
Ensembl chr 8:51,225,543...51,325,415 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA 		(PMID:26456828)
GO_REF:0000107
(PMID:20141841), (PMID:23217706) 		RGD
Ensembl		 PMID:20141841 PMID:23217706 PMID:26456828 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within ISO
IEA 		(PMID:22891351)
GO_REF:0000107 		RGD
Ensembl		 PMID:22891351 GO_REF:0000107 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:20935145)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:20935145 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029 		JBrowse link
G Trim63 tripartite motif containing 63 involved_in ISO
IEA 		(PMID:34244144)
GO_REF:0000107 		RGD
Ensembl		 PMID:34244144 GO_REF:0000107 NCBI chr 5:146,533,492...146,547,332
Ensembl chr 5:146,533,507...146,547,322 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO MGI:97592 (PMID:16155866) RGD PMID:16155866 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO MGI:97592 (PMID:15331593), (PMID:16155866) RGD PMID:15331593 PMID:16155866 NCBI chr  X:19,508,522...19,562,165
Ensembl chr  X:19,508,546...19,562,182 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in ISO MGI:4950915 (PMID:32192773) RGD PMID:32192773 NCBI chr10:36,856,534...36,878,789
Ensembl chr10:36,358,101...36,377,862 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA
ISO 		GO_REF:0000107
MGI:3610390 (PMID:16155866), (PMID:23292513) 		Ensembl
RGD		 PMID:16155866 PMID:23292513 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within ISO
IEA 		(PMID:18698006)
GO_REF:0000107 		RGD
Ensembl		 PMID:18698006 GO_REF:0000107 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117 		JBrowse link
negative regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpca hippocalcin IDA RGD PMID:15336960 RGD:9686438 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841 		JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:21928830), (PMID:30559291)
(PMID:27471269) 		RGD PMID:21928830 PMID:27471269 PMID:30559291 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
negative regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668 		JBrowse link
negative regulation of nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in ISO
IEA 		(PMID:9596658)
GO_REF:0000107 		RGD
Ensembl		 PMID:9596658 GO_REF:0000107 NCBI chr 5:150,556,615...150,583,231
Ensembl chr 5:150,556,615...150,583,231 		JBrowse link
negative regulation of pentose-phosphate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B involved_in IEA
ISO 		GO_REF:0000107
(PMID:35122041) 		Ensembl
RGD		 PMID:35122041 GO_REF:0000107 NCBI chr 5:68,684,541...68,697,582
Ensembl chr 5:63,889,046...63,902,116 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA 		(PMID:21336310)
GO_REF:0000107 		RGD
Ensembl		 PMID:21336310 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:31172217 RGD:329403053 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479 		JBrowse link
G Eno1 enolase 1 involved_in ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:166,002,867...166,014,252
Ensembl chr 5:160,719,951...160,731,336
Ensembl chr 3:160,719,951...160,731,336 		JBrowse link
G Hnf1a HNF1 homeobox A IMP RGD PMID:20841353 RGD:150540305 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:29061364) RGD PMID:29061364 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IMP
IGI 		PMID:15459207 CAFA PMID:15459207 PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22629444 RGD:7240532 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 IMP RGD PMID:26888427 RGD:11040458 NCBI chr 1:161,122,370...161,129,413
Ensembl chr 1:151,711,901...151,718,189 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:21080215) RGD PMID:21080215 NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO
IEA 		(PMID:31574452)
GO_REF:0000107 		RGD
Ensembl		 PMID:31574452 GO_REF:0000107 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:24096089 RGD:10413842 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) RGD PMID:24747689 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:56,097,166...56,191,841
Ensembl chr 3:56,097,269...56,192,100 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 IMP RGD PMID:23590160 RGD:8694322 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase IMP RGD PMID:20348225 RGD:13432160 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
G Tmsb4x thymosin beta 4, X-linked involved_in ISO (PMID:21106936) RGD PMID:21106936 NCBI chr  X:27,144,666...27,146,667
Ensembl chr  X:27,128,610...27,146,667
Ensembl chr10:27,128,610...27,146,667 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:28802038) RGD PMID:28802038 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
IEA 		(PMID:23498975)
GO_REF:0000107 		RGD
Ensembl		 PMID:23498975 GO_REF:0000107 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
positive regulation of ATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bend3 BEN domain containing 3 involved_in ISO
IEA 		(PMID:28977671)
GO_REF:0000107 		RGD
Ensembl		 PMID:28977671 GO_REF:0000107 NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671 		JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO
IEA 		UniProtKB:P49768 (PMID:29061364)
GO_REF:0000107 		RGD
Ensembl		 PMID:29061364 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator acts_upstream_of ISO
IEA 		(PMID:8089148)
GO_REF:0000107 		RGD
Ensembl		 PMID:8089148 GO_REF:0000107 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Esrrb estrogen-related receptor beta involved_in IDA PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Gck glucokinase IDA RGD PMID:17553851 RGD:2301905 NCBI chr14:84,999,019...85,041,098
Ensembl chr14:80,785,060...80,826,995 		JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO
IEA 		MGI:3692960 (PMID:11147825)
GO_REF:0000107 		RGD
Ensembl		 PMID:11147825 GO_REF:0000107 NCBI chr 7:130,842,526...130,851,530
Ensembl chr 7:130,844,138...130,851,529 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of ISO
IEA 		(PMID:8089148)
GO_REF:0000107 		RGD
Ensembl		 PMID:8089148 GO_REF:0000107 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A acts_upstream_of_or_within ISO
IEA 		(PMID:17408640)
GO_REF:0000107 		RGD
Ensembl		 PMID:17408640 GO_REF:0000107 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928 		JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:29061364) RGD PMID:29061364 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA 		(PMID:7688386)
GO_REF:0000107 		RGD
Ensembl		 PMID:7688386 GO_REF:0000107 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941), (PMID:7688386) RGD PMID:381941 PMID:7688386 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Insr insulin receptor involved_in ISO (PMID:7693131) RGD PMID:7693131 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO
IEA 		(PMID:21084751)
GO_REF:0000107 		RGD
Ensembl		 PMID:21084751 GO_REF:0000107 NCBI chr 9:6,799,101...6,903,616
Ensembl chr 9:6,562,288...6,667,064 		JBrowse link
G Mif macrophage migration inhibitory factor IMP RGD PMID:11086030 RGD:1642010 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
Ensembl chr 4:12,790,902...12,799,504 		JBrowse link
G Mlx MAX dimerization protein MLX involved_in ISO (PMID:14742444) RGD PMID:14742444 NCBI chr10:86,019,216...86,024,326
Ensembl chr10:86,019,588...86,032,350 		JBrowse link
G Mlxipl MLX interacting protein-like involved_in ISO
IEA 		(PMID:19995986)
(PMID:14742444), (PMID:15118080)
GO_REF:0000107 		RGD
Ensembl		 PMID:14742444 PMID:15118080 PMID:19995986 GO_REF:0000107 NCBI chr12:21,541,608...21,577,120
Ensembl chr12:21,543,576...21,577,112 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22842522 RGD:7207891 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in ISO (PMID:22898868) RGD PMID:22898868 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IDA PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IDA PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 5:125,036,945...125,109,010
Ensembl chr 5:119,813,226...119,879,543 		JBrowse link
G Prxl2c peroxiredoxin like 2C involved_in ISO
IEA 		(PMID:29901208)
GO_REF:0000107 		RGD
Ensembl		 PMID:29901208 GO_REF:0000107 NCBI chr17:812,199...839,536
Ensembl chr17:812,213...844,075 		JBrowse link
G Psen1 presenilin 1 involved_in ISO
IEA 		UniProtKB:P05067 (PMID:29061364)
GO_REF:0000107 		RGD
Ensembl		 PMID:29061364 GO_REF:0000107 NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Sik2 salt-inducible kinase 2 acts_upstream_of_or_within ISO (PMID:21084751) RGD PMID:21084751 NCBI chr 8:51,225,543...51,325,343
Ensembl chr 8:51,225,543...51,325,415 		JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of ISO
IEA 		UniProtKB:Q9JK62 (PMID:21976511)
GO_REF:0000107 		RGD
Ensembl		 PMID:21976511 GO_REF:0000107 NCBI chr14:18,841,289...19,293,297
Ensembl chr14:18,845,159...19,272,883 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:35263589) RGD PMID:35263589 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 involved_in ISO
IEA 		(PMID:34244144)
GO_REF:0000107 		RGD
Ensembl		 PMID:34244144 GO_REF:0000107 NCBI chr14:41,838,859...41,849,743
Ensembl chr14:41,485,031...41,495,590 		JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in ISO
IEA 		(PMID:28327662)
GO_REF:0000107 		RGD
Ensembl		 PMID:28327662 GO_REF:0000107 NCBI chr11:57,052,129...57,791,214
Ensembl chr11:57,072,880...57,510,210 		JBrowse link
positive regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in IMP PMID:12230553 FlyBase PMID:12230553 RGD:405650381 NCBI chr  X:19,508,522...19,562,165
Ensembl chr  X:19,508,546...19,562,182 		JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2B receptor acts_upstream_of_or_within ISO MGI:3773754 (PMID:18340377) RGD PMID:18340377 NCBI chr10:46,940,394...46,956,772
Ensembl chr10:46,940,384...46,956,772 		JBrowse link
G Guca1a guanylate cyclase activator 1A IDA RGD PMID:12545196 RGD:1599357 NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
positive regulation of NAD metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nqo1 NAD(P)H quinone dehydrogenase 1 IDA RGD PMID:29389585 RGD:25823193 NCBI chr19:52,205,374...52,220,267
Ensembl chr19:35,295,573...35,310,557 		JBrowse link
positive regulation of pentose-phosphate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO
IEA 		(PMID:24872551)
GO_REF:0000107 		RGD
Ensembl		 PMID:24872551 GO_REF:0000107 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029 		JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA 		(PMID:25637806)
GO_REF:0000107 		RGD
Ensembl		 PMID:25637806 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
regulation of ATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668 		JBrowse link
G Dnm1l dynamin 1-like involved_in ISO
IEA 		(PMID:20585624)
GO_REF:0000107 		RGD
Ensembl		 PMID:20585624 GO_REF:0000107 NCBI chr11:98,084,049...98,135,663
Ensembl chr11:84,581,216...84,631,482 		JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl2 ARF like GTPase 2 involved_in ISO
IEA 		(PMID:30945270)
GO_REF:0000107 		RGD
Ensembl		 PMID:30945270 GO_REF:0000107 NCBI chr 1:212,863,422...212,875,425
Ensembl chr 1:203,434,129...203,446,119 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISS
ISO 		GO_REF:0000024
(PMID:26383020) 		UniProt
RGD		 PMID:26383020 GO_REF:0000024 NCBI chr 3:164,785,162...164,791,410
Ensembl chr 3:144,325,036...144,331,401 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:29775581) RGD PMID:29775581 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within 		ISO
IEA
ISS 		(PMID:32697943)
GO_REF:0000107
MGI:96552 (PMID:17437992)
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:17437992 PMID:32697943 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO MGI:106918 (PMID:17437992) RGD PMID:17437992 NCBI chr10:38,906,460...38,908,810
Ensembl chr10:38,405,716...38,408,066 		JBrowse link
G Jmjd8 jumonji domain containing 8 involved_in ISO
IEA
ISS 		(PMID:27199445)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:27199445 GO_REF:0000024 GO_REF:0000107 NCBI chr10:14,848,965...14,851,881
Ensembl chr10:14,848,980...14,851,879 		JBrowse link
G Mlxipl MLX interacting protein-like IDA RGD PMID:11724780 RGD:634534 NCBI chr12:21,541,608...21,577,120
Ensembl chr12:21,543,576...21,577,112 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISS
ISO 		GO_REF:0000107
GO_REF:0000024
(PMID:22923583) 		Ensembl
UniProt
RGD		 PMID:22923583 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 TAS RGD PMID:9202288 RGD:729510 NCBI chr17:66,983,629...67,064,702
Ensembl chr17:66,983,686...67,063,125 		JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:131,842,058...131,859,484
Ensembl chr 7:129,963,105...129,980,561 		JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in ISO
IEA
IBA 		(PMID:15877279)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:15877279 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,744,695...10,985,939
Ensembl chr 4:10,010,890...10,252,142 		JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		MGI:3055131 (PMID:15857891)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:15857891 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:83,744,385...83,753,629
Ensembl chr 9:76,295,715...76,304,959 		JBrowse link
G Slc2a6 solute carrier family 2 member 6 involved_in ISO (PMID:30431159) RGD PMID:30431159 NCBI chr 3:10,348,395...10,355,208
Ensembl chr 3:10,348,395...10,355,208 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO
IEA 		MGI:3052754 (PMID:28069950)
GO_REF:0000107 		RGD
Ensembl		 PMID:28069950 GO_REF:0000107 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
ISS
IEA 		(PMID:26455326)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:26455326 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,211,733...9,229,273
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guca1a guanylate cyclase activator 1A acts_upstream_of_or_within ISO MGI:1194489 (PMID:15336959) RGD PMID:15336959 NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO MGI:102770 (PMID:15336959) RGD PMID:15336959 NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antkmt adenine nucleotide translocase lysine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:14,812,274...14,814,798
Ensembl chr10:14,812,269...14,814,193 		JBrowse link
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO
IEA
IBA
ISS 		(PMID:30530489)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024 		RGD
Ensembl
GO_Central
UniProt		 PMID:30530489 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:84,313,991...84,329,195
Ensembl chr 2:82,603,009...82,618,308 		JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO
IEA 		(PMID:30318146)
GO_REF:0000107 		RGD
Ensembl		 PMID:30318146 GO_REF:0000107 NCBI chr12:21,628,319...21,629,398
Ensembl chr12:21,626,450...21,629,408 		JBrowse link
regulation of NAD metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:28991266) 		UniProt
Ensembl
RGD		 PMID:28991266 GO_REF:0000024 GO_REF:0000107 NCBI chr17:8,484,340...8,547,268
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
regulation of NADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdx1 ferredoxin 1 IDA RGD PMID:10525147 RGD:727285 NCBI chr 8:61,164,839...61,183,645
Ensembl chr 8:52,268,536...52,287,414 		JBrowse link
G Hnf1a HNF1 homeobox A IMP RGD PMID:20841353 RGD:150540305 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Me1 malic enzyme 1 involved_in ISO
IEA 		(PMID:23334421)
GO_REF:0000107 		RGD
Ensembl		 PMID:23334421 GO_REF:0000107 NCBI chr 8:87,549,043...87,660,251
Ensembl chr 8:87,549,043...87,660,304 		JBrowse link
G Me2 malic enzyme 2 involved_in ISO
IEA 		(PMID:23334421)
GO_REF:0000107 		RGD
Ensembl		 PMID:23334421 GO_REF:0000107 NCBI chr18:67,350,833...67,400,987
Ensembl chr18:67,355,795...67,400,987 		JBrowse link
regulation of pentose-phosphate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 IDA RGD PMID:16234247 RGD:1625062 NCBI chr13:104,728,539...104,798,884
Ensembl chr13:104,728,539...104,788,687 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO
IEA
IBA 		(PMID:25928429)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25928429 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029 		JBrowse link
regulation of purine nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lacc1 laccase domain containing 1 involved_in ISO (PMID:31978345) RGD PMID:31978345 NCBI chr15:52,390,267...52,407,630
Ensembl chr15:52,395,183...52,407,545 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        small molecule metabolic process 1944
          regulation of small molecule metabolic process 412
            regulation of nucleotide metabolic process 104
              negative regulation of nucleotide metabolic process + 36
              positive regulation of nucleotide metabolic process + 49
              regulation of nucleotide biosynthetic process + 31
              regulation of nucleotide catabolic process + 62
              regulation of purine nucleotide metabolic process + 103
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        primary metabolic process 10727
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 730
              nucleoside phosphate metabolic process 699
                nucleotide metabolic process 540
                  regulation of nucleotide metabolic process 104
                    negative regulation of nucleotide metabolic process + 36
                    positive regulation of nucleotide metabolic process + 49
                    regulation of nucleotide biosynthetic process + 31
                    regulation of nucleotide catabolic process + 62
                    regulation of purine nucleotide metabolic process + 103
paths to the root