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ONTOLOGY REPORT - ANNOTATIONS
Term:oxidative phosphorylation
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Accession:GO:0006119 term browser browse the term
Definition:The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.
Synonyms:exact_synonym: respiratory-chain phosphorylation
 xref: Wikipedia:Oxidative_phosphorylation

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oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak2 adenylate kinase 2 JBrowse link NW_004936474 15,887,014 15,908,522 RGD:9068941
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 JBrowse link NW_004936619 1,323,247 1,325,520 RGD:9068941
G Fxn frataxin JBrowse link NW_004936503 5,323,206 5,343,228 RGD:9068941
G LOC101971854 surfeit locus protein 1 JBrowse link NW_004936669 3,527,741 3,532,087 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004936508 4,943,987 5,013,356 RGD:9068941
G Nipsnap2 nipsnap homolog 2 JBrowse link NW_004936543 7,928,250 7,957,436 RGD:9068941
G Tefm transcription elongation factor, mitochondrial JBrowse link NW_004936538 2,803,195 2,812,939 RGD:9068941
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bid BH3 interacting domain death agonist JBrowse link NW_004936807 708,340 750,127 RGD:9068941
G Coq7 coenzyme Q7, hydroxylase JBrowse link NW_004936501 5,035,986 5,043,864 RGD:9068941
G Dguok deoxyguanosine kinase JBrowse link NW_004936556 226,643 263,517 RGD:9068941
G Mtch2 mitochondrial carrier 2 JBrowse link NW_004936562 1,622,341 1,644,191 RGD:9068941
G Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 JBrowse link NW_004936507 11,254,729 11,256,395 RGD:9068941
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 JBrowse link NW_004936524 1,231,744 1,243,783 RGD:9068941
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 JBrowse link NW_004936903 503,633 514,235 RGD:9068941
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 JBrowse link NW_004936599 2,169,434 2,173,090 RGD:9068941
G Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 JBrowse link NW_004936500 1,102,724 1,113,856 RGD:9068941
G Snca synuclein alpha JBrowse link NW_004936685 2,077,017 2,175,298 RGD:9068941
G Taz tafazzin JBrowse link NW_004936809 1,160,265 1,168,956 RGD:9068941
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link NW_004936517 743,036 752,836 RGD:9068941
G Atp5f1b ATP synthase F1 subunit beta JBrowse link NW_004936646 951,236 958,907 RGD:9068941
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link NW_004936484 7,016,049 7,031,060 RGD:9068941
G Atp5f1d ATP synthase F1 subunit delta JBrowse link NW_004936588 612,255 614,894 RGD:9068941
G Atp5f1e ATP synthase F1 subunit epsilon JBrowse link NW_004936530 1,509,605 1,513,033 RGD:9068941
G Atp5me ATP synthase membrane subunit e JBrowse link NW_004936477 22,416,505 22,417,543 RGD:9068941
G Atp5mf ATP synthase membrane subunit f JBrowse link NW_004936750 1,716,752 1,725,700 RGD:9068941
G Atp5mg ATP synthase membrane subunit g JBrowse link NW_004936542 3,453,287 3,461,125 RGD:9068941
G Atp5pb ATP synthase peripheral stalk-membrane subunit b JBrowse link NW_004936690 120,572 135,509 RGD:9068941
G Atp5pd ATP synthase peripheral stalk subunit d JBrowse link NW_004936594 354,416 359,415 RGD:9068941
G Atp5pf ATP synthase peripheral stalk subunit F6 JBrowse link NW_004936640 1,916,711 1,924,823 RGD:9068941
G Atp5po ATP synthase peripheral stalk subunit OSCP JBrowse link NW_004936500 8,444,681 8,454,694 RGD:9068941
G Stoml2 stomatin like 2 JBrowse link NW_004936524 3,129,149 3,132,405 RGD:9068941
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afg1l AFG1 like ATPase JBrowse link NW_004936564 4,553,758 4,755,126 RGD:9068941
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain derived neurotrophic factor JBrowse link NW_004936540 5,530,081 5,582,765 RGD:9068941
G Coq9 coenzyme Q9 JBrowse link NW_004936475 9,502,638 9,517,601 RGD:9068941
G Dld dihydrolipoamide dehydrogenase JBrowse link NW_004936479 16,247,230 16,271,597 RGD:9068941
G Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 JBrowse link NW_004936745 1,436,257 1,471,785 RGD:9068941
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link NW_004936670 2,742,553 2,772,697 RGD:9068941
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdhaf2 succinate dehydrogenase complex assembly factor 2 JBrowse link NW_004936581 1,607,741 1,628,347 RGD:9068941
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101956274 cytochrome b-c1 complex subunit 1, mitochondrial JBrowse link NW_004936529 385,942 396,196 RGD:9068941
G LOC101965457 ubiquinol-cytochrome-c reductase complex assembly factor 3 JBrowse link NW_004936581 590,503 591,225 RGD:9068941
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 JBrowse link NW_004936747 800,070 864,299 RGD:9068941
negative regulation of oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link NW_004936599 3,033,854 3,046,364 RGD:9068941
G Apoc3 apolipoprotein C3 JBrowse link NW_004936542 2,106,927 2,108,412 RGD:9068941
G Mlxipl MLX interacting protein like JBrowse link NW_004936543 2,839,105 2,856,997 RGD:9068941
G Pde12 phosphodiesterase 12 JBrowse link NW_004936473 7,894,026 7,897,844 RGD:9068941
G Pde2a phosphodiesterase 2A JBrowse link NW_004936498 1,856,256 1,944,405 RGD:9068941
G Ppif peptidylprolyl isomerase F JBrowse link NW_004936521 404,574 411,381 RGD:9068941
G Rhoa ras homolog family member A JBrowse link NW_004936529 1,000,050 1,045,655 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004936727 1,936,066 1,937,766 RGD:9068941
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966578 cytochrome c oxidase assembly factor 6 homolog JBrowse link NW_004936484 17,812,157 17,815,837 RGD:9068941
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnb1 cyclin B1 JBrowse link NW_004936480 400,287 407,677 RGD:9068941
G Cdk1 cyclin dependent kinase 1 JBrowse link NW_004936614 2,300,682 2,313,611 RGD:9068941
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Iscu iron-sulfur cluster assembly enzyme JBrowse link NW_004936769 492,024 498,587 RGD:9068941
G Park7 Parkinsonism associated deglycase JBrowse link NW_004936623 2,422,780 2,436,817 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004936474 6,574,471 6,589,478 RGD:9068941
positive regulation of oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gadd45gip1 GADD45G interacting protein 1 JBrowse link NW_004936659 2,008,025 2,010,052 RGD:9068941
G Lexm lymphocyte expansion molecule JBrowse link NW_004936522 6,456,423 6,479,654 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004936470 20,480,844 20,485,955 RGD:9068941
G Myog myogenin JBrowse link NW_004936567 1,507,042 1,509,814 RGD:9068941
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link NW_004936501 11,998,064 11,999,431 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004936524 3,085,959 3,102,461 RGD:9068941
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase JBrowse link NW_004936643 2,339,073 2,354,780 RGD:9068941
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 JBrowse link NW_004936543 2,895,771 2,897,761 RGD:9068941
regulation of oxidative phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link NW_004936809 615,133 634,618 RGD:9068941
G Ak4 adenylate kinase 4 JBrowse link NW_004936692 2,593,409 2,654,583 RGD:9068941
G Atp7a ATPase copper transporting alpha JBrowse link NW_004936683 2,874,022 2,936,214 RGD:9068941
G LOC101958099 cytochrome c oxidase subunit 7A-related protein, mitochondrial JBrowse link NW_004936508 9,279,974 9,287,279 RGD:9068941
G LOC101975274 ubiquinol-cytochrome-c reductase complex assembly factor 2 JBrowse link NW_004936476 25,241,426 25,254,057 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004936470 20,480,844 20,485,955 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004936474 6,574,471 6,589,478 RGD:9068941
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link NW_004936646 1,422,844 1,427,929 RGD:9068941
G Slc25a23 solute carrier family 25 member 23 JBrowse link NW_004936588 3,792,760 3,804,788 RGD:9068941
G Slc25a33 solute carrier family 25 member 33 JBrowse link NW_004936623 3,585,372 3,603,515 RGD:9068941
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11933
    metabolic process 7631
      ATP metabolic process 185
        oxidative phosphorylation 71
          ATP synthesis coupled electron transport + 27
          mitochondrial ATP synthesis coupled proton transport + 15
          negative regulation of oxidative phosphorylation + 9
          positive regulation of oxidative phosphorylation + 11
          regulation of oxidative phosphorylation + 30
Path 2
Term Annotations click to browse term
  biological_process 11933
    metabolic process 7631
      cellular metabolic process 7039
        phosphorus metabolic process 2373
          phosphate-containing compound metabolic process 2362
            phosphorylation 1788
              oxidative phosphorylation 71
                ATP synthesis coupled electron transport + 27
                mitochondrial ATP synthesis coupled proton transport + 15
                negative regulation of oxidative phosphorylation + 9
                positive regulation of oxidative phosphorylation + 11
                regulation of oxidative phosphorylation + 30
paths to the root

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