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ONTOLOGY REPORT - ANNOTATIONS

Term:oxidative phosphorylation
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Accession:GO:0006119 term browser browse the term
Definition:The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.
Synonyms:exact_synonym: respiratory-chain phosphorylation
 xref: Wikipedia:Oxidative_phosphorylation


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oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK2 adenylate kinase 2 ISO RGD PMID:18423391 RGD:5147997 NCBI chr 6:89,295,164...89,318,169 JBrowse link
G C2orf69 chromosome 2 open reading frame 69 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:103,542,938...103,560,941 JBrowse link
G CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,921,600...49,923,529
Ensembl chr14:49,921,595...49,923,526 		JBrowse link
G COX4I1 cytochrome c oxidase subunit 4I1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:3,131,017...3,137,619
Ensembl chr 6:3,131,019...3,137,530 		JBrowse link
G COX4I2 cytochrome c oxidase subunit 4I2 involved_in IEA UniProt GO_REF:0000041 NCBI chr17:35,340,499...35,346,090
Ensembl chr17:35,341,889...35,346,090 		JBrowse link
G COX5A cytochrome c oxidase subunit 5A involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:58,622,969...58,644,024
Ensembl chr 7:58,622,964...58,644,021 		JBrowse link
G COX5B mitochondrial cytochrome c oxidase subunit Vb involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:56,630,297...56,632,107
Ensembl chr 3:56,629,272...56,632,119 		JBrowse link
G COX6A1 cytochrome c oxidase subunit 6A1 involved_in IEA UniProt GO_REF:0000041 NCBI chr14:40,408,600...40,410,810
Ensembl chr14:40,408,631...40,412,870 		JBrowse link
G COX6A2 cytochrome c oxidase subunit 6A2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:17,108,623...17,135,108
Ensembl chr 3:17,133,476...17,135,104 		JBrowse link
G COX6C COX6C protein involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:37,074,619...37,089,364
Ensembl chr 4:37,074,649...37,091,849 		JBrowse link
G COX7A1 cytochrome c oxidase subunit 7A1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:45,519,225...45,520,721
Ensembl chr 6:45,517,229...45,520,713 		JBrowse link
G COX7B cytochrome c oxidase subunit 7B involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:61,962,383...61,969,011
Ensembl chr  X:61,962,412...61,970,152 		JBrowse link
G COX7C cytochrome c oxidase subunit 7C involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:94,345,436...94,347,709
Ensembl chr 2:94,345,447...94,352,651 		JBrowse link
G COX8A cytochrome c oxidase subunit 8A involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:8,101,609...8,103,313
Ensembl chr 2:8,101,613...8,103,285 		JBrowse link
G COX8H COX8H protein involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:69,199...70,730
Ensembl chr 2:69,200...70,732 		JBrowse link
G FXN frataxin acts_upstream_of_or_within ISO (PMID:16278235)
(PMID:17404227)		 MGI PMID:16278235 PMID:17404227 NCBI chr 1:222,412,485...222,433,224
Ensembl chr 1:222,412,509...222,454,776 		JBrowse link
G LOC100157935 cytochrome c oxidase subunit 8C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:114,727,841...114,729,102 JBrowse link
G LOC100517408 cytochrome c oxidase subunit 7B2, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:36,736,233...36,856,176
Ensembl chr 8:36,736,352...36,736,597 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16805809) Ensembl
MGI		 PMID:16805809 GO_REF:0000107 NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585 		JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I involved_in IEA UniProt GO_REF:0000041 NCBI chr MT:6,511...8,055
Ensembl chr MT:6,511...8,055 		JBrowse link
G NIPSNAP2 nipsnap homolog 2 involved_in ISO (PMID:20888800) BHF-UCL PMID:20888800 NCBI chr 3:16,910,589...16,941,767
Ensembl chr 3:16,882,643...16,941,739 		JBrowse link
G TEFM transcription elongation factor, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,864,582...42,875,705
Ensembl chr12:42,864,612...43,047,444 		JBrowse link
aerobic electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MT-CO3 mitochondrially encoded cytochrome c oxidase III involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:9,800...10,583
Ensembl chr MT:9,800...10,583 		JBrowse link
G SLC25A51 solute carrier family 25 member 51 acts_upstream_of
involved_in		 ISO (PMID:33262325)
(PMID:33087354)		 UniProt PMID:33087354 PMID:33262325 NCBI chr 1:238,638,282...238,667,612
Ensembl chr 1:238,637,876...238,667,617 		JBrowse link
ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MT-CO2 mitochondrially encoded cytochrome c oxidase II involved_in IBA GO_Central GO_REF:0000033 NCBI chr MT:8,203...8,890
Ensembl chr MT:8,203...8,890 		JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:11,359...12,736
Ensembl chr MT:11,359...12,736 		JBrowse link
G MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:12,935...14,755
Ensembl chr MT:12,935...14,755 		JBrowse link
G ND4L NADH dehydrogenase subunit 4L involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr MT:11,069...11,365
Ensembl chr MT:11,069...11,365 		JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:70,954,844...70,961,717
Ensembl chr 2:70,954,896...70,963,322 		JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:109,413,726...109,451,813
Ensembl chr15:109,409,771...109,451,676 		JBrowse link
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BID BH3 interacting domain death agonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26219591) Ensembl
MGI		 PMID:26219591 GO_REF:0000107 NCBI chr 5:69,849,007...69,874,647
Ensembl chr 5:69,849,002...69,875,853 		JBrowse link
G COA6 cytochrome c oxidase assembly factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:56,751,142...56,758,956 JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:18635541) MGI PMID:18635541 NCBI chr 3:26,366,006...26,373,604
Ensembl chr 3:26,366,000...26,373,584 		JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr 3:69,054,749...69,091,366
Ensembl chr 3:69,054,761...69,091,341 		JBrowse link
G MIR451 microRNA mir-451 involved_in ISO (PMID:30971389) MGI PMID:30971389 NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872 		JBrowse link
G MTCH2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chr 2:14,982,991...15,005,214
Ensembl chr 2:14,983,154...15,005,213 		JBrowse link
G NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr 5:88,292,760...88,317,111 JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:33,849,206...33,865,080
Ensembl chr10:33,802,051...33,865,385 		JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:89,246,958...89,257,090
Ensembl chr 4:89,246,960...89,257,085 		JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,958,508...4,964,211
Ensembl chr 2:4,958,522...4,964,216 		JBrowse link
G NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:206,111,337...206,123,987 JBrowse link
G SNCA synuclein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16260631) Ensembl
MGI		 PMID:16260631 GO_REF:0000107 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128 		JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,940,036...124,946,275
Ensembl chr  X:124,940,031...124,946,273 		JBrowse link
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG1L AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,367,421...74,590,766
Ensembl chr 1:74,367,617...74,591,853 		JBrowse link
G COX4I1 cytochrome c oxidase subunit 4I1 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:3,131,017...3,137,619
Ensembl chr 6:3,131,019...3,137,530 		JBrowse link
G COX4I2 cytochrome c oxidase subunit 4I2 involved_in IEA
IBA		 Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr17:35,340,499...35,346,090
Ensembl chr17:35,341,889...35,346,090 		JBrowse link
G COX5A cytochrome c oxidase subunit 5A involved_in IEA
IBA		 InterPro
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:58,622,969...58,644,024
Ensembl chr 7:58,622,964...58,644,021 		JBrowse link
G COX5B mitochondrial cytochrome c oxidase subunit Vb involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:56,630,297...56,632,107
Ensembl chr 3:56,629,272...56,632,119 		JBrowse link
G COX6A2 cytochrome c oxidase subunit 6A2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:17,108,623...17,135,108
Ensembl chr 3:17,133,476...17,135,104 		JBrowse link
G COX6C COX6C protein involved_in IEA UniProt GO_REF:0000104 NCBI chr 4:37,074,619...37,089,364
Ensembl chr 4:37,074,649...37,091,849 		JBrowse link
G COX7A1 cytochrome c oxidase subunit 7A1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:45,519,225...45,520,721
Ensembl chr 6:45,517,229...45,520,713 		JBrowse link
G COX7A2 cytochrome c oxidase subunit 7A2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:90,696,746...90,703,407
Ensembl chr 1:90,696,698...90,703,409 		JBrowse link
G COX7A2L cytochrome c oxidase subunit 7A2 like involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:97,951,115...97,983,309
Ensembl chr 3:97,951,114...97,983,309 		JBrowse link
G COX7B cytochrome c oxidase subunit 7B involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:61,962,383...61,969,011
Ensembl chr  X:61,962,412...61,970,152 		JBrowse link
G COX7C cytochrome c oxidase subunit 7C involved_in IEA
IBA		 InterPro
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:94,345,436...94,347,709
Ensembl chr 2:94,345,447...94,352,651 		JBrowse link
G COX8A cytochrome c oxidase subunit 8A involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 2:8,101,609...8,103,313
Ensembl chr 2:8,101,613...8,103,285 		JBrowse link
G COX8H COX8H protein involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 2:69,199...70,730
Ensembl chr 2:69,200...70,732 		JBrowse link
G CYCS cytochrome c, somatic involved_in ISO
IBA		 RGD
GO_Central		 PMID:10980192 GO_REF:0000033 RGD:2300408 NCBI chr18:47,169,921...47,172,212
Ensembl chr18:47,169,866...47,173,866 		JBrowse link
G LOC100157935 cytochrome c oxidase subunit 8C, mitochondrial involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 7:114,727,841...114,729,102 JBrowse link
G LOC100517408 cytochrome c oxidase subunit 7B2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:36,736,233...36,856,176
Ensembl chr 8:36,736,352...36,736,597 		JBrowse link
G LOC100519295 cytochrome c-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:72,500,149...72,500,463 JBrowse link
G LOC100739590 cytochrome c pseudogene involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:56,722,357...56,744,653 JBrowse link
G LOC106507972 cytochrome c pseudogene involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:48,803,991...48,804,397 JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I involved_in IBA GO_Central GO_REF:0000033 NCBI chr MT:6,511...8,055
Ensembl chr MT:6,511...8,055 		JBrowse link
G MT-CO3 mitochondrially encoded cytochrome c oxidase III involved_in IBA GO_Central GO_REF:0000033 NCBI chr MT:9,800...10,583
Ensembl chr MT:9,800...10,583 		JBrowse link
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:15341590 RGD:1358393 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765 		JBrowse link
G COQ9 coenzyme Q9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23255162) Ensembl
MGI		 PMID:23255162 GO_REF:0000107 NCBI chr 6:19,373,052...19,390,738
Ensembl chr 6:19,372,711...19,390,820 		JBrowse link
G DLD dihydrolipoamide dehydrogenase acts_upstream_of_or_within ISO (PMID:15009635) MGI PMID:15009635 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583 		JBrowse link
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23530063) Ensembl
MGI		 PMID:23530063 GO_REF:0000107 NCBI chr11:24,011,530...24,087,156
Ensembl chr11:24,011,686...24,087,040 		JBrowse link
G MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:3,922...4,876
Ensembl chr MT:3,922...4,876 		JBrowse link
G MT-ND3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:10,653...10,998
Ensembl chr MT:10,653...10,998 		JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:11,359...12,736
Ensembl chr MT:11,359...12,736 		JBrowse link
G MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:12,935...14,755
Ensembl chr MT:12,935...14,755 		JBrowse link
G MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:14,739...15,266
Ensembl chr MT:14,739...15,266 		JBrowse link
G ND2 NADH dehydrogenase subunit 2 involved_in IEA
IBA		 Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr MT:5,087...6,128
Ensembl chr MT:5,087...6,128 		JBrowse link
G NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24652937) InterPro
MGI
GO_Central
Ensembl		 PMID:24652937 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:138,999,174...139,031,892
Ensembl chr15:138,986,421...139,031,897 		JBrowse link
G NDUFA8 NADH:ubiquinone oxidoreductase subunit A8 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:262,243,225...262,258,186
Ensembl chr 1:262,236,482...262,264,097 		JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:33,849,206...33,865,080
Ensembl chr10:33,802,051...33,865,385 		JBrowse link
G NDUFB8 NADH:ubiquinone oxidoreductase subunit B8 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr14:111,626,827...111,633,548
Ensembl chr14:111,626,097...111,633,564 		JBrowse link
G NDUFB9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:15,105,305...15,113,281
Ensembl chr 4:15,105,305...15,113,550 		JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:12,486,488...12,492,507
Ensembl chr 9:12,485,167...12,492,591 		JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:109,413,726...109,451,813
Ensembl chr15:109,409,771...109,451,676 		JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:89,246,958...89,257,090
Ensembl chr 4:89,246,960...89,257,085 		JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:15,031,147...15,036,880
Ensembl chr 2:15,031,149...15,036,880 		JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:78,993,909...79,000,001
Ensembl chr16:78,993,913...79,000,006 		JBrowse link
G NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in ISO (PMID:17275378) UniProt PMID:17275378 NCBI chr 2:77,080,311...77,087,141 JBrowse link
G NDUFS8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:4,863,295...4,867,392
Ensembl chr 2:4,862,589...4,867,393 		JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,958,508...4,964,211
Ensembl chr 2:4,958,522...4,964,216 		JBrowse link
G NDUFV2 NADH:ubiquinone oxidoreductase core subunit V2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:98,819,156...98,852,561
Ensembl chr 6:98,815,885...98,852,524 		JBrowse link
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SDHA succinate dehydrogenase complex flavoprotein subunit A involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:79,838,442...79,862,956
Ensembl chr16:79,834,044...79,862,524 		JBrowse link
G SDHAF2 succinate dehydrogenase complex assembly factor 2 involved_in IEA
IBA		 UniProt
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:10,074,965...10,088,185
Ensembl chr 2:10,072,920...10,088,117 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B involved_in IC (PMID:17480203) UniProt PMID:17480203 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:89,135,410...89,169,164
Ensembl chr 4:89,130,379...89,169,118 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D involved_in IBA
IC		 (PMID:15989954) GO_Central
UniProt		 PMID:15989954 GO_REF:0000033 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950 		JBrowse link
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYC1 cytochrome c1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:606,510...608,991
Ensembl chr 4:606,516...608,996 		JBrowse link
G CYCS cytochrome c, somatic involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:47,169,921...47,172,212
Ensembl chr18:47,169,866...47,173,866 		JBrowse link
G LOC100519295 cytochrome c-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:72,500,149...72,500,463 JBrowse link
G LOC100522678 cytochrome b-c1 complex subunit Rieske, mitochondrial involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:39,366,761...39,373,876
Ensembl chr 6:39,364,890...39,373,872 		JBrowse link
G LOC100739590 cytochrome c pseudogene involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:56,722,357...56,744,653 JBrowse link
G LOC106507972 cytochrome c pseudogene involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:48,803,991...48,804,397 JBrowse link
G MT-CYB mitochondrially encoded cytochrome b involved_in IDA
IBA		 (PMID:22690928) UniProt
GO_Central		 PMID:22690928 GO_REF:0000033 NCBI chr MT:15,342...16,481
Ensembl chr MT:15,342...16,481 		JBrowse link
G UQCC3 ubiquinol-cytochrome c reductase complex assembly factor 3 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:9,077,055...9,078,649
Ensembl chr 2:9,074,784...9,078,541 		JBrowse link
G UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X involved_in IEA
IBA		 InterPro
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr14:46,783,340...46,786,140
Ensembl chr14:46,783,325...46,786,140 		JBrowse link
G UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:76,903,219...76,906,276
Ensembl chr 2:76,903,281...76,909,544 		JBrowse link
G UQCRB ubiquinol-cytochrome c reductase binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:40,403,272...40,409,080
Ensembl chr 4:40,403,109...40,409,057 		JBrowse link
G UQCRC1 ubiquinol-cytochrome c reductase core protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16782889) Ensembl
MGI		 PMID:16782889 GO_REF:0000107 NCBI chr13:31,298,449...31,308,719
Ensembl chr13:31,298,449...31,309,516 		JBrowse link
G UQCRH ubiquinol-cytochrome c reductase hinge protein involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:165,123,915...165,134,375 JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 2:135,186,366...135,188,237
Ensembl chr 2:135,186,501...135,188,293 		JBrowse link
negative regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5IF1 ATP synthase inhibitory factor subunit 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:85,307,242...85,309,211
Ensembl chr 6:85,307,189...85,309,215 		JBrowse link
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23530063) Ensembl
MGI		 PMID:23530063 GO_REF:0000107 NCBI chr11:24,011,530...24,087,156
Ensembl chr11:24,011,686...24,087,040 		JBrowse link
negative regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,860,391...5,874,124 		JBrowse link
G APOC3 apolipoprotein C3 ISO RGD PMID:11177239 RGD:1599177 NCBI chr 9:44,211,171...44,213,538
Ensembl chr 9:44,211,194...44,213,533 		JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,898,675...10,934,257
Ensembl chr 3:10,898,670...10,934,048 		JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294502|PMID:21724846) UniProt PMID:21724846 MGI:5294502 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964 		JBrowse link
G PPIF peptidylprolyl isomerase F involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:81,674,671...81,681,977
Ensembl chr14:81,667,672...81,689,495 		JBrowse link
G RHOA ras homolog family member A involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607 		JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:8903396 RGD:14995471 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416 		JBrowse link
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COA6 cytochrome c oxidase assembly factor 6 involved_in ISO (PMID:26160915) UniProt PMID:26160915 NCBI chr14:56,751,142...56,758,956 JBrowse link
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNB1 cyclin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,338,239...47,348,385
Ensembl chr16:47,338,110...47,348,377 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:64,233,945...64,255,290
Ensembl chr14:64,233,987...64,372,197 		JBrowse link
G CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:28589937) Ensembl
FlyBase		 PMID:28589937 GO_REF:0000107 NCBI chr 3:16,812,409...16,819,130
Ensembl chr 3:16,812,404...16,819,124 		JBrowse link
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISCU iron-sulfur cluster assembly enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,216,103...42,222,570
Ensembl chr14:42,216,111...42,222,711 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,516 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24652937) Ensembl
MGI		 PMID:24652937 GO_REF:0000107 NCBI chr 6:78,863,195...78,884,663
Ensembl chr 6:78,863,190...78,884,640 		JBrowse link
positive regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIMAP2 ciliary microtubule associated protein 2 acts_upstream_of_or_within ISO (PMID:25883318) MGI PMID:25883318 NCBI chr 6:157,532,139...157,552,542
Ensembl chr 6:157,532,779...157,552,413 		JBrowse link
G GADD45GIP1 GADD45G interacting protein 1 acts_upstream_of_or_within ISO (PMID:25883318) MGI PMID:25883318 NCBI chr 2:66,087,421...66,089,578
Ensembl chr 2:66,087,453...66,090,710 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:18414044 RGD:10059611 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G MYOG myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chr 9:113,783,233...113,785,312
Ensembl chr 9:113,782,284...113,787,340 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,402,781...18,404,411
Ensembl chr 3:18,402,935...18,511,087 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,851,206...235,869,634 		JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:95,738,789...95,750,835
Ensembl chr 1:95,733,090...95,750,841 		JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:21,984,750...21,992,393
Ensembl chr 5:21,984,580...21,992,407 		JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,584,288...63,599,537
Ensembl chr10:63,583,695...63,599,453 		JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,216,430...77,219,301
Ensembl chr 2:77,216,436...77,222,632 		JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr17:59,163,085...59,174,488 JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 8:112,092...113,526
Ensembl chr 8:110,605...113,510 		JBrowse link
G ATP5MF ATP synthase membrane subunit f involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:6,389,338...6,396,960 JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 9:45,706,449...45,716,541
Ensembl chr 9:45,706,534...45,717,036 		JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:108,896,063...108,907,626
Ensembl chr 4:108,896,057...108,907,805 		JBrowse link
G ATP5PD ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr12:6,241,467...6,247,344 JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:189,281,429...189,290,234
Ensembl chr13:189,278,945...189,290,229 		JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:197,509,331...197,519,530
Ensembl chr13:197,509,331...197,519,588 		JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr MT:9,120...9,800
Ensembl chr MT:9,120...9,800 		JBrowse link
G MT-ATP8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr MT:8,959...9,162
Ensembl chr MT:8,959...9,162 		JBrowse link
G STOML2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:235,891,479...235,894,944
Ensembl chr 1:235,890,679...235,894,737 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANTKMT adenine nucleotide translocase lysine methyltransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:41,057,727...41,059,309
Ensembl chr 3:41,057,649...41,062,032 		JBrowse link
G ATPSCKMT ATP synthase c subunit lysine N-methyltransferase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:72,223,492...72,242,073
Ensembl chr16:72,223,534...72,242,064 		JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,951,173...10,959,935
Ensembl chr 3:10,955,877...10,959,916 		JBrowse link
regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,076...124,501,741 		JBrowse link
G AK4 adenylate kinase 4 involved_in ISO (PMID:26980435) UniProt PMID:26980435 NCBI chr 6:147,177,029...147,257,799
Ensembl chr 6:147,177,029...147,257,814 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8550574) MGI PMID:8550574 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G COX7A1 cytochrome c oxidase subunit 7A1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:45,519,225...45,520,721
Ensembl chr 6:45,517,229...45,520,713 		JBrowse link
G COX7A2 cytochrome c oxidase subunit 7A2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:90,696,746...90,703,407
Ensembl chr 1:90,696,698...90,703,409 		JBrowse link
G COX7A2L cytochrome c oxidase subunit 7A2 like involved_in ISO (MGI:5607399|PMID:23857330) UniProt PMID:23857330 MGI:5607399 NCBI chr 3:97,951,115...97,983,309
Ensembl chr 3:97,951,114...97,983,309 		JBrowse link
G MACROH2A1 macroH2A.1 histone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,534,138...137,623,886 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:78,863,195...78,884,663
Ensembl chr 6:78,863,190...78,884,640 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
G SLC25A23 solute carrier family 25 member 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23344948) Ensembl
MGI		 PMID:23344948 GO_REF:0000107 NCBI chr 2:72,625,544...72,643,572
Ensembl chr 2:72,625,583...72,641,791 		JBrowse link
G SLC25A33 solute carrier family 25 member 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,934,810...69,969,091
Ensembl chr 6:69,934,834...69,969,084 		JBrowse link
G TMEM135 transmembrane protein 135 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33064130) Ensembl
MGI		 PMID:33064130 GO_REF:0000107 NCBI chr 9:20,741,085...21,020,899
Ensembl chr 9:20,721,991...21,021,130 		JBrowse link
G UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:29,902,089...29,929,802
Ensembl chr 7:29,899,043...29,929,795 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17634
    cellular process 16614
      cellular metabolic process 8963
        generation of precursor metabolites and energy 454
          energy derivation by oxidation of organic compounds 331
            cellular respiration 224
              aerobic respiration 172
                oxidative phosphorylation 130
                  ATP synthesis coupled electron transport + 80
                  aerobic electron transport chain + 65
                  negative regulation of oxidative phosphorylation + 8
                  positive regulation of oxidative phosphorylation 6
                  proton motive force-driven mitochondrial ATP synthesis + 19
                  regulation of oxidative phosphorylation + 27
paths to the root