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ONTOLOGY REPORT - ANNOTATIONS

Term:oxidative phosphorylation
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Accession:GO:0006119 term browser browse the term
Definition:The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.
Synonyms:exact_synonym: respiratory-chain phosphorylation
 xref: Wikipedia:Oxidative_phosphorylation

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oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK2 adenylate kinase 2 ISO RGD PMID:18423391 RGD:5147997 NCBI chr20:99,834,286...99,863,071
Ensembl chr20:99,834,334...99,858,781 		JBrowse link
G CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,882,007...6,884,176
Ensembl chr19:6,878,662...6,884,655 		JBrowse link
G COX1 cytochrome c oxidase subunit I involved_in IEA UniProt GO_REF:0000041 NCBI chr MT:5,899...7,437
Ensembl chr MT:5,899...7,437 		JBrowse link
G COX4I2 cytochrome c oxidase subunit 4I2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:36,031,595...36,041,419
Ensembl chr 2:36,032,458...36,041,504 		JBrowse link
G COX5A cytochrome c oxidase subunit 5A, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr26:8,533,410...8,551,818
Ensembl chr26:8,533,453...8,552,280 		JBrowse link
G COX6A1 cytochrome c oxidase subunit 6A1 involved_in IEA UniProt GO_REF:0000041 NCBI chr11:115,792,822...115,795,368
Ensembl chr11:115,792,622...115,796,488 		JBrowse link
G COX6A2 cytochrome c oxidase subunit 6A2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:28,129,377...28,136,258
Ensembl chr 5:28,129,419...28,129,946 		JBrowse link
G COX7B2 cytochrome c oxidase subunit 7B2, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr27:3,353,319...3,503,408
Ensembl chr27:3,503,043...3,503,285 		JBrowse link
G COX8C cytochrome c oxidase subunit 8C involved_in IEA UniProt GO_REF:0000041 NCBI chr24:71,098,014...71,099,417
Ensembl chr24:71,098,346...71,099,180 		JBrowse link
G CUNH2orf69 chromosome unknown C2orf69 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:85,412,119...85,428,373
Ensembl chr10:85,412,287...85,425,998 		JBrowse link
G FXN frataxin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17404227)
(PMID:16278235)		 Ensembl
MGI		 PMID:16278235 PMID:17404227 GO_REF:0000107 NCBI chr12:80,133,899...80,173,950
Ensembl chr12:80,134,422...80,173,168 		JBrowse link
G LOC103224205 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:80,255,425...80,258,433 JBrowse link
G LOC103233412 cytochrome c oxidase subunit 4 isoform 1, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:71,207,509...71,214,976
Ensembl chr 5:71,206,941...71,215,034 		JBrowse link
G LOC103233475 cytochrome c oxidase subunit 8A, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:10,269,020...10,271,484
Ensembl chr 1:10,269,021...10,271,175 		JBrowse link
G LOC103237200 cytochrome c oxidase subunit 6C involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:94,737,674...94,753,239 JBrowse link
G LOC119618593 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041
G LOC119619672 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041
G LOC119621674 cytochrome c oxidase subunit 6C-like involved_in IEA UniProt GO_REF:0000041
G LOC119624472 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G LOC119626210 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G LOC119626757 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G LOC119627124 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G LOC119628060 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G LOC119628303 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16805809) Ensembl
MGI		 PMID:16805809 GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G NIPSNAP2 nipsnap homolog 2 involved_in ISO (PMID:20888800) BHF-UCL PMID:20888800 NCBI chr21:2,773,970...2,810,977 JBrowse link
G TEFM transcription elongation factor, mitochondrial involved_in ISO (PMID:21278163) UniProt PMID:21278163 NCBI chr16:25,601,744...25,609,071
Ensembl chr16:25,601,941...25,608,209 		JBrowse link
aerobic electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COX3 cytochrome c oxidase subunit III involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:9,204...9,987
Ensembl chr MT:9,204...9,987 		JBrowse link
G SLC25A51 solute carrier family 25 member 51 acts_upstream_of
involved_in		 ISO (PMID:33262325)
(PMID:33087354)		 UniProt PMID:33087354 PMID:33262325 NCBI chr12:42,689,643...42,702,696
Ensembl chr12:42,699,621...42,700,514 		JBrowse link
ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COX2 cytochrome c oxidase subunit II involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:7,582...8,265
Ensembl chr MT:7,582...8,265 		JBrowse link
G ND4 NADH dehydrogenase subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:10,751...12,128 JBrowse link
G ND4L NADH dehydrogenase subunit 4L involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr MT:10,461...10,757
Ensembl chr MT:10,461...10,757 		JBrowse link
G ND5 NADH dehydrogenase subunit 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:12,328...14,136
Ensembl chr MT:12,328...14,136 		JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:7,675,813...7,684,746 JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:91,893,337...91,927,559
Ensembl chr10:91,893,616...91,927,592 		JBrowse link
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BID BH3 interacting domain death agonist involved_in IEA Ensembl GO_REF:0000107 Ensembl chr19:1,952,320...1,982,804 JBrowse link
G COA6 cytochrome c oxidase assembly factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:71,550,057...71,561,012
Ensembl chr25:71,550,617...71,560,786 		JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:18635541) MGI PMID:18635541 NCBI chr 5:17,351,429...17,362,305
Ensembl chr 5:17,351,506...17,362,916 		JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr14:33,320,957...33,356,088
Ensembl chr14:33,320,969...33,356,093 		JBrowse link
G NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:90,371,129...90,413,695
Ensembl chr11:90,369,526...90,413,841 		JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:47,682,066...47,701,467
Ensembl chr12:47,682,192...47,701,273 		JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,767,864...2,780,336
Ensembl chr20:2,768,064...2,780,704 		JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,650,547...6,656,185
Ensembl chr 1:6,648,520...6,656,172 		JBrowse link
G NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:86,750,630...86,759,744
Ensembl chr 2:86,750,648...86,759,826 		JBrowse link
G SNCA synuclein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16260631) Ensembl
MGI		 PMID:16260631 GO_REF:0000107 NCBI chr 7:38,083,154...38,194,068
Ensembl chr 7:38,081,509...38,191,479 		JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in IEA Ensembl GO_REF:0000107
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG1L AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:65,341,306...65,559,829
Ensembl chr13:65,331,879...65,531,108 		JBrowse link
G COX1 cytochrome c oxidase subunit I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:5,899...7,437
Ensembl chr MT:5,899...7,437 		JBrowse link
G COX3 cytochrome c oxidase subunit III involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:9,204...9,987
Ensembl chr MT:9,204...9,987 		JBrowse link
G COX4I2 cytochrome c oxidase subunit 4I2 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:36,031,595...36,041,419
Ensembl chr 2:36,032,458...36,041,504 		JBrowse link
G COX5A cytochrome c oxidase subunit 5A, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr26:8,533,410...8,551,818
Ensembl chr26:8,533,453...8,552,280 		JBrowse link
G COX5B cytochrome c oxidase subunit 5B involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr14:1,331,896...1,336,483 JBrowse link
G COX6A1 cytochrome c oxidase subunit 6A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:115,792,822...115,795,368
Ensembl chr11:115,792,622...115,796,488 		JBrowse link
G COX6A2 cytochrome c oxidase subunit 6A2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:28,129,377...28,136,258
Ensembl chr 5:28,129,419...28,129,946 		JBrowse link
G COX7A1 cytochrome c oxidase subunit 7A1 involved_in IEA InterPro GO_REF:0000002 Ensembl chr 6:31,061,502...31,064,327 JBrowse link
G COX7A2 cytochrome c oxidase subunit 7A2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr17:45,771...51,466
Ensembl chr17:45,771...51,669 		JBrowse link
G COX7A2L cytochrome c oxidase subunit 7A2 like involved_in IEA InterPro GO_REF:0000002 NCBI chr14:64,895,317...64,909,162 JBrowse link
G COX7B2 cytochrome c oxidase subunit 7B2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr27:3,353,319...3,503,408
Ensembl chr27:3,503,043...3,503,285 		JBrowse link
G COX8C cytochrome c oxidase subunit 8C involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr24:71,098,014...71,099,417
Ensembl chr24:71,098,346...71,099,180 		JBrowse link
G LOC103219556 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:80,619,719...80,620,608 JBrowse link
G LOC103224205 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 4:80,255,425...80,258,433 JBrowse link
G LOC103224843 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:82,661,869...82,662,512 JBrowse link
G LOC103225665 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:123,802,811...123,803,900 JBrowse link
G LOC103226354 cytochrome c involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10980192 GO_REF:0000118 RGD:2300408 NCBI chr21:33,251,825...33,253,298 JBrowse link
G LOC103231764 cytochrome c oxidase subunit 7A-related protein, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:28,925,427...28,925,939 JBrowse link
G LOC103232530 cytochrome c oxidase subunit 6A1, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:103,546,106...103,546,485 JBrowse link
G LOC103233412 cytochrome c oxidase subunit 4 isoform 1, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:71,207,509...71,214,976
Ensembl chr 5:71,206,941...71,215,034 		JBrowse link
G LOC103233475 cytochrome c oxidase subunit 8A, mitochondrial involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 1:10,269,020...10,271,484
Ensembl chr 1:10,269,021...10,271,175 		JBrowse link
G LOC103237200 cytochrome c oxidase subunit 6C involved_in IEA UniProt GO_REF:0000104 NCBI chr 8:94,737,674...94,753,239 JBrowse link
G LOC103239827 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:50,429,188...50,430,169 JBrowse link
G LOC103240990 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:98,360,057...98,360,558 JBrowse link
G LOC103244190 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:19,872,809...19,873,633 JBrowse link
G LOC119618593 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119619672 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119621674 cytochrome c oxidase subunit 6C-like involved_in IEA UniProt GO_REF:0000104
G LOC119624472 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119626210 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119626757 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119627124 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119628060 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
G LOC119628303 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:15341590 RGD:1358393 NCBI chr 1:37,386,825...37,451,380
Ensembl chr 1:37,449,593...37,450,336 		JBrowse link
G COQ9 coenzyme Q9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23255162) Ensembl
MGI		 PMID:23255162 GO_REF:0000107 NCBI chr 5:43,378,467...43,393,037
Ensembl chr 5:43,378,539...43,392,384 		JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15009635) Ensembl
MGI		 PMID:15009635 GO_REF:0000107 NCBI chr21:76,795,573...76,825,504
Ensembl chr21:76,795,592...76,824,923 		JBrowse link
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23530063) Ensembl
MGI		 PMID:23530063 GO_REF:0000107 NCBI chr 3:21,160,975...21,239,221
Ensembl chr 3:21,161,312...21,239,025 		JBrowse link
G LOC119623709 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
G ND2 NADH dehydrogenase subunit 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr MT:4,465...5,506 JBrowse link
G NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24652937) InterPro
TreeGrafter
MGI		 PMID:24652937 GO_REF:0000002 GO_REF:0000118 NCBI chr10:126,018,383...126,082,847
Ensembl chr10:126,015,852...126,083,082 		JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:7,675,813...7,684,746 JBrowse link
G NDUFA8 NADH:ubiquinone oxidoreductase subunit A8 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:17,434,527...17,450,068
Ensembl chr12:17,434,524...17,450,352 		JBrowse link
G NDUFAF1 NADH:ubiquinone oxidoreductase complex assembly factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:41,598,979...41,620,883
Ensembl chr26:41,598,977...41,622,438 		JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:47,682,066...47,701,467
Ensembl chr12:47,682,192...47,701,273 		JBrowse link
G NDUFB8 NADH:ubiquinone oxidoreductase subunit B8 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 9:93,544,663...93,550,748
Ensembl chr 9:93,544,589...93,550,905 		JBrowse link
G NDUFB9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:119,103,300...119,113,440
Ensembl chr 8:119,102,917...119,113,950 		JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:69,275,729...69,285,782
Ensembl chr 1:69,272,890...69,286,276 		JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:91,893,337...91,927,559
Ensembl chr10:91,893,616...91,927,592 		JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:2,767,864...2,780,336
Ensembl chr20:2,768,064...2,780,704 		JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,735,040...17,740,508
Ensembl chr 1:17,733,645...17,745,677 		JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 4:1,643,810...1,658,651
Ensembl chr 4:1,643,822...1,658,858 		JBrowse link
G NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in ISO (PMID:17275378) UniProt PMID:17275378 NCBI chr 6:1,152,380...1,163,488
Ensembl chr 6:1,152,540...1,164,175 		JBrowse link
G NDUFS8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:6,499,371...6,505,685
Ensembl chr 1:6,499,249...6,505,699 		JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:6,650,547...6,656,185
Ensembl chr 1:6,648,520...6,656,172 		JBrowse link
G NDUFV2 NADH:ubiquinone oxidoreductase core subunit V2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:68,018,120...68,052,883
Ensembl chr18:68,018,143...68,053,634 		JBrowse link
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103216985 succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:19,606,593...19,607,737 JBrowse link
G LOC103225005 succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:90,317,418...90,318,609 JBrowse link
G SDHAF2 succinate dehydrogenase complex assembly factor 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:12,401,164...12,417,389
Ensembl chr 1:12,398,920...12,417,383 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:2,613,618...2,658,374 JBrowse link
G SDHD succinate dehydrogenase complex subunit D involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 1:103,443,752...103,517,917 JBrowse link
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYTB cytochrome b involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:14,732...15,872
Ensembl chr MT:14,732...15,872 		JBrowse link
G LOC103218927 cytochrome b-c1 complex subunit 6, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:20,096,364...20,096,905
Ensembl chr12:20,096,443...20,096,718 		JBrowse link
G LOC103219556 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:80,619,719...80,620,608 JBrowse link
G LOC103224843 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:82,661,869...82,662,512 JBrowse link
G LOC103225665 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:123,802,811...123,803,900 JBrowse link
G LOC103226354 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:33,251,825...33,253,298 JBrowse link
G LOC103233987 ubiquinol-cytochrome-c reductase complex assembly factor 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:11,234,810...11,235,569
Ensembl chr 1:11,235,023...11,235,492 		JBrowse link
G LOC103234417 cytochrome b-c1 complex subunit Rieske, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:24,293,640...24,298,983
Ensembl chr 6:24,293,920...24,299,043 		JBrowse link
G LOC103237165 cytochrome b-c1 complex subunit 7 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:91,194,628...91,199,264
Ensembl chr 8:91,194,625...91,199,219 		JBrowse link
G LOC103237609 cytochrome c1, heme protein, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:138,307,537...138,310,037
Ensembl chr 8:138,307,581...138,312,915 		JBrowse link
G LOC103239827 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:50,429,188...50,430,169 JBrowse link
G LOC103240990 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:98,360,057...98,360,558 JBrowse link
G LOC103244190 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:19,872,809...19,873,633 JBrowse link
G UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr19:12,644,211...12,647,094
Ensembl chr19:12,644,235...12,647,096 		JBrowse link
G UQCRC1 ubiquinol-cytochrome c reductase core protein I involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16782889) Ensembl
MGI		 PMID:16782889 GO_REF:0000107 NCBI chr22:10,000,432...10,012,524
Ensembl chr22:10,000,864...10,012,202 		JBrowse link
G UQCRH ubiquinol-cytochrome c reductase hinge protein involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr20:86,479,930...86,484,783 JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr23:35,684,395...35,685,481
Ensembl chr23:35,684,495...35,685,670 		JBrowse link
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23530063) Ensembl
MGI		 PMID:23530063 GO_REF:0000107 NCBI chr 3:21,160,975...21,239,221
Ensembl chr 3:21,161,312...21,239,025 		JBrowse link
negative regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr 1:7,708,595...7,724,634
Ensembl chr 1:7,705,725...7,724,589 		JBrowse link
G APOC3 apolipoprotein C3 ISO RGD PMID:11177239 RGD:1599177 NCBI chr 1:108,196,283...108,199,274
Ensembl chr 1:108,196,939...108,199,342 		JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,442,520...9,465,772 JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294502|PMID:21724846) UniProt PMID:21724846 MGI:5294502 NCBI chr 1:63,812,877...63,912,602
Ensembl chr 1:63,812,840...63,880,492 		JBrowse link
G PPIF peptidylprolyl isomerase F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:52,109,865...52,117,703
Ensembl chr 9:52,109,272...52,117,483 		JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,757,381...10,809,257
Ensembl chr22:10,757,337...10,772,704 		JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:8903396 RGD:14995471
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COA6 cytochrome c oxidase assembly factor 6 involved_in ISO (PMID:26160915) UniProt PMID:26160915 NCBI chr25:71,550,057...71,561,012
Ensembl chr25:71,550,617...71,560,786 		JBrowse link
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNB1 cyclin B1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr 4:65,265,798...65,276,465
Ensembl chr 4:65,265,844...65,277,085 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr 9:70,475,736...70,492,947 JBrowse link
G CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 acts_upstream_of ISO (PMID:28589937) FlyBase PMID:28589937 NCBI chr21:2,675,522...2,680,406 JBrowse link
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISCU iron-sulfur cluster assembly enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,753,175...103,760,168
Ensembl chr11:103,753,189...103,760,364 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:123,776,084...123,808,031
Ensembl chr20:123,776,297...123,798,434 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24652937) Ensembl
MGI		 PMID:24652937 GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069 		JBrowse link
positive regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIMAP2 ciliary microtubule associated protein 2 acts_upstream_of_or_within ISO (PMID:25883318) MGI PMID:25883318 NCBI chr20:78,091,021...78,134,561
Ensembl chr20:78,118,675...78,129,762 		JBrowse link
G GADD45GIP1 GADD45G interacting protein 1 acts_upstream_of_or_within ISO (PMID:25883318) MGI PMID:25883318 NCBI chr 6:11,634,435...11,637,462
Ensembl chr 6:11,632,641...11,637,419 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:18414044 RGD:10059611 NCBI chr 8:122,282,989...122,288,392
Ensembl chr 8:122,282,630...122,288,384 		JBrowse link
G MYOG myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chr25:26,264,872...26,269,652
Ensembl chr25:26,266,717...26,268,867 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,382,125...26,385,605
Ensembl chr 5:26,382,132...26,385,348 		JBrowse link
G VCP valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr12:45,545,139...45,560,702
Ensembl chr12:45,545,507...45,563,380 		JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:34,815,924...34,828,052
Ensembl chr18:34,816,027...34,830,924 		JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:52,587,608...52,600,057
Ensembl chr11:52,587,143...52,600,756 		JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:7,836,863...7,853,645
Ensembl chr 9:7,836,845...7,854,078 		JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 6:1,010,210...1,013,360
Ensembl chr 6:1,010,265...1,013,002 		JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:5,109,902...5,113,576
Ensembl chr 2:5,109,941...5,113,566 		JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr27:48,114,033...48,115,963
Ensembl chr27:48,113,477...48,115,896 		JBrowse link
G ATP5MF ATP synthase membrane subunit f involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:13,699,537...13,707,421 JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 1:109,779,020...109,789,097 JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,150,488...22,162,740
Ensembl chr20:22,150,239...22,162,312 		JBrowse link
G ATP5PD ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr16:46,625,512...46,630,613 JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,539,014...66,550,186
Ensembl chr 2:66,538,864...66,550,046 		JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:58,273,181...58,285,615 JBrowse link
G LOC103224307 ATP synthase subunit f, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:24,527,063...24,527,506 JBrowse link
G LOC103226185 ATP synthase subunit f, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:18,861,417...18,862,433 JBrowse link
G LOC103227171 ATP synthase subunit O, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:116,427,491...116,428,242 JBrowse link
G LOC103232531 ATP synthase subunit f, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:103,542,935...103,543,355 JBrowse link
G LOC119618820 ATP synthase subunit f, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119625299 ATP synthase subunit f, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118
G STOML2 stomatin like 2 involved_in ISO (MGI:5438519|PMID:23028053) UniProt PMID:23028053 MGI:5438519 NCBI chr12:45,513,578...45,516,876
Ensembl chr12:45,513,307...45,517,110 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATPSCKMT ATP synthase c subunit lysine N-methyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:9,591,946...9,786,841
Ensembl chr 4:9,764,125...9,776,361 		JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,383,068...9,385,590
Ensembl chr28:9,383,095...9,383,775 		JBrowse link
regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:5500881|PMID:23604518) UniProt PMID:23604518 MGI:5500881 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G AK4 adenylate kinase 4 involved_in ISO (PMID:26980435) UniProt PMID:26980435 NCBI chr20:67,840,572...67,924,691 JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8550574) MGI PMID:8550574 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709 		JBrowse link
G COX7A1 cytochrome c oxidase subunit 7A1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 6:31,061,502...31,064,327 JBrowse link
G COX7A2 cytochrome c oxidase subunit 7A2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:45,771...51,466
Ensembl chr17:45,771...51,669 		JBrowse link
G COX7A2L cytochrome c oxidase subunit 7A2 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:64,895,317...64,909,162 JBrowse link
G H2AFY core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382 		JBrowse link
G LOC103231764 cytochrome c oxidase subunit 7A-related protein, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:28,925,427...28,925,939 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr 8:122,282,989...122,288,392
Ensembl chr 8:122,282,630...122,288,384 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:53,141,435...53,146,625
Ensembl chr11:53,141,462...53,147,795 		JBrowse link
G SLC25A23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO (PMID:23344948) MGI PMID:23344948 NCBI chr 6:6,042,186...6,063,969
Ensembl chr 6:6,044,516...6,063,842 		JBrowse link
G SLC25A33 solute carrier family 25 member 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:122,187,366...122,220,903
Ensembl chr20:122,187,637...122,220,661 		JBrowse link
G TMEM135 transmembrane protein 135 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33064130) Ensembl
MGI		 PMID:33064130 GO_REF:0000107 NCBI chr 1:78,285,287...78,539,607
Ensembl chr 1:78,285,376...78,541,905 		JBrowse link
G UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,366,871...38,380,841
Ensembl chr17:38,366,907...38,380,841 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17080
    cellular process 15997
      cellular metabolic process 9346
        generation of precursor metabolites and energy 476
          energy derivation by oxidation of organic compounds 340
            cellular respiration 243
              aerobic respiration 187
                oxidative phosphorylation 141
                  ATP synthesis coupled electron transport + 90
                  aerobic electron transport chain + 76
                  negative regulation of oxidative phosphorylation + 8
                  positive regulation of oxidative phosphorylation 6
                  proton motive force-driven mitochondrial ATP synthesis + 21
                  regulation of oxidative phosphorylation + 28
paths to the root