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ONTOLOGY REPORT - ANNOTATIONS


Term:oxaloacetate metabolic process
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Accession:GO:0006107 term browser browse the term
Definition:The chemical reactions and pathways involving oxaloacetate, the anion of oxobutanedioic acid, an important intermediate in metabolism, especially as a component of the TCA cycle.
Synonyms:exact_synonym: oxaloacetate metabolism


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oxaloacetate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase involved_in ISO
IEA
(PMID:1371749)
GO_REF:0000107
RGD
Ensembl
PMID:1371749 GO_REF:0000107 NCBI chr10:88,392,248...88,442,845
Ensembl chr10:88,392,248...88,442,845
JBrowse link
G Cs citrate synthase IDA RGD PMID:5820645, PMID:938457, PMID:818082 RGD:2306824, RGD:2306828, RGD:2306825 NCBI chr 7:2,752,680...2,778,963
Ensembl chr 7:2,752,680...2,778,963
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within IDA
ISO
(MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within IDA
ISO
(MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
G Mdh1 malate dehydrogenase 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17447164, PMID:21873635 RGD:1624966, RGD:13792537 NCBI chr14:106,378,349...106,393,642
Ensembl chr14:106,378,942...106,393,670
JBrowse link
G Mdh1b malate dehydrogenase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:70,403,612...70,450,204
Ensembl chr 9:70,404,093...70,450,170
JBrowse link
G Mdh2 malate dehydrogenase 2 IDA RGD PMID:938457 RGD:2306828 NCBI chr12:23,941,451...23,954,406
Ensembl chr12:23,941,448...23,954,431
JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
(PMID:22674578)
PMID:21873635
RGD PMID:22674578, PMID:21873635 RGD:13792537 NCBI chr11:45,462,345...45,473,107
Ensembl chr11:45,462,345...45,473,104
JBrowse link
G Pc pyruvate carboxylase IDA RGD PMID:15507531, PMID:5773282, PMID:6049928 RGD:1601554, RGD:2302972, RGD:2302971 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IDA
ISO
(MGI:6119963|PMID:29230018)
PMID:26709450
PMID:30193097
PMID:26322521
(PMID:26792594)
(PMID:30193097)
PMID:31461616
RGD PMID:26792594 PMID:29230018 PMID:30193097, PMID:16125296, PMID:26709450, PMID:30193097, PMID:26322521, PMID:31461616, PMID:4303362, PMID:6049928 MGI:6119963, RGD:1601233, RGD:30309918, RGD:13825433, RGD:30309937, RGD:30309906, RGD:2302850, RGD:2302971 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) IDA RGD PMID:6049928 RGD:2302971 NCBI chr15:34,216,735...34,224,357
Ensembl chr15:34,216,833...34,224,193
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    metabolic process 11911
      cellular metabolic process 10866
        organic acid metabolic process 1004
          oxoacid metabolic process 966
            carboxylic acid metabolic process 948
              dicarboxylic acid metabolic process 104
                oxaloacetate metabolic process 11
                  asparagine biosynthetic process from oxaloacetate 0
                  glutamate catabolic process to oxaloacetate 0
                  protocatechuate catabolic process, meta-cleavage 0
paths to the root