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ONTOLOGY REPORT - ANNOTATIONS

Term:fumarate metabolic process
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Accession:GO:0006106 term browser browse the term
Definition:The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.
Synonyms:exact_synonym: fumarate metabolism

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fumarate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh fumarate hydratase involved_in TAS
ISO
ISS
IBA
IDA		 (MGI:5496931|PMID:23643539)
GO_REF:0000024
(PMID:21498518)
(PMID:26237645), (PMID:30718813)
(PMID:30761759)
PMID:21873635		 RGD
UniProt		 PMID:21498518 PMID:23643539 PMID:26237645 PMID:30718813 PMID:30761759, PMID:2914923, PMID:21873635, PMID:938457 GO_REF:0000024 MGI:5496931, RGD:632664, RGD:13792537, RGD:2306828 NCBI chr13:93,651,486...93,677,371
Ensembl chr13:93,651,484...93,677,377 		JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within IDA
ISO		 (MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within IDA
ISO		 (MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    metabolic process 11911
      cellular metabolic process 10866
        organic acid metabolic process 1004
          oxoacid metabolic process 966
            carboxylic acid metabolic process 948
              dicarboxylic acid metabolic process 104
                fumarate metabolic process 3
                  2,5-dihydroxypyridine catabolic process to fumarate 0
                  glutamate catabolic process to 2-oxoglutarate 2
                  glutamine catabolic process to fumarate + 0
                  tyrosine catabolic process to fumarate 0
paths to the root