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ONTOLOGY REPORT - ANNOTATIONS

Term:isocitrate metabolic process
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Accession:GO:0006102 term browser browse the term
Definition:The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle.
Synonyms:exact_synonym: isocitrate metabolism


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isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4933405O20Rikl RIKEN cDNA 4933405O20 gene like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,300,241...100,301,711 JBrowse link
G Aco2 aconitase 2 IDA RGD PMID:14674759 PMID:9712727 RGD:2306852, RGD:2306877 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261 		JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IDA
ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:10521434), (PMID:19935646), (PMID:20171178)
GO_REF:0000002
PMID:21873635		 UniProt
RGD
InterPro		 PMID:10521434 PMID:19935646 PMID:20171178 PMID:17447164 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:1624966, RGD:13792537 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000024 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025 		JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 8:54,971,694...54,991,085
Ensembl chr 8:54,971,740...54,991,084 		JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:938457 PMID:21873635 RGD:2306828, RGD:13792537 NCBI chr 3:117,481,845...117,486,909
Ensembl chr 3:117,481,845...117,486,982 		JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IDA
ISO
ISS
IBA		 (PMID:2605193)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:2605193 PMID:938457 PMID:21873635 GO_REF:0000024, RGD:2306828, RGD:13792537 NCBI chr  X:151,515,244...151,524,175
Ensembl chr  X:151,515,247...151,524,171 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      small molecule metabolic process 1918
        alcohol metabolic process 374
          secondary alcohol metabolic process 163
            isocitrate metabolic process 7
Path 2
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      cellular metabolic process 10124
        organic acid metabolic process 1070
          oxoacid metabolic process 1059
            carboxylic acid metabolic process 1044
              tricarboxylic acid metabolic process 18
                isocitrate metabolic process 7
paths to the root