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ONTOLOGY REPORT - ANNOTATIONS


Term:acetyl-CoA biosynthetic process from pyruvate
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Accession:GO:0006086 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.
Synonyms:exact_synonym: acetyl-CoA anabolism from pyruvate;   acetyl-CoA formation from pyruvate;   acetyl-CoA synthesis from pyruvate;   pyruvate dehydrogenase pathway
 xref: MetaCyc:PYRUVDEHYD-PWY



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acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7487891 PMID:21873635 RGD:1599112, RGD:13792537 NCBI chr 8:50,979,151...51,004,435
Ensembl chr 8:50,978,051...51,004,479
JBrowse link
G Dld dihydrolipoamide dehydrogenase IDA RGD PMID:7487891 RGD:1599112 NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795
JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in IDA
ISO
IBA
IEA
(PMID:19081061)
PMID:21873635
GO_REF:0000002
RGD
InterPro
PMID:19081061 PMID:7487891 PMID:21873635 GO_REF:0000002, RGD:1599112, RGD:13792537 NCBI chr  X:34,700,481...34,714,309
Ensembl chr  X:34,700,409...34,714,311
JBrowse link
G Pdha1l1 pyruvate dehydrogenase (lipoamide) alpha 1-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:82,511,483...82,514,378
Ensembl chr16:82,511,511...82,514,372
JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7487891 PMID:21873635 RGD:1599112, RGD:13792537 NCBI chr 2:229,872,300...229,873,848 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in IDA
ISO
IBA
IEA
(PMID:19081061)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19081061 PMID:7487891 PMID:21873635 GO_REF:0000107, RGD:1599112, RGD:13792537 NCBI chr15:16,752,561...16,758,503
Ensembl chr15:16,750,980...16,758,500
JBrowse link
G Pdhx pyruvate dehydrogenase complex, component X involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:89,372,472...89,396,759
Ensembl chr 3:89,371,497...89,431,773
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 TAS RGD PMID:12435272 RGD:729541 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpc1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558) RGD PMID:22628558 MGI:5428352 NCBI chr 1:52,437,745...52,449,369
Ensembl chr 1:52,437,741...52,449,400
JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within ISO MGI:5635078 (MGI:5428352|PMID:22628558), (MGI:5576400|PMID:24910426) RGD PMID:22628558 PMID:24910426 MGI:5428352 MGI:5576400 NCBI chr13:77,728,176...77,747,664
Ensembl chr13:77,728,250...77,747,664
JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 acts_upstream_of_or_within ISO MGI:2182095|MGI:2386703 (MGI:3817854|PMID:18586888) RGD PMID:18586888 MGI:3817854 NCBI chr  X:34,700,481...34,714,309
Ensembl chr  X:34,700,409...34,714,311
JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5487511|PMID:22195962)
Ensembl
RGD
PMID:22195962 GO_REF:0000107 MGI:5487511 NCBI chr 3:56,705,824...56,733,040
Ensembl chr 3:56,705,871...56,733,038
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5428826|PMID:22360721)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22360721 GO_REF:0000024 GO_REF:0000107 MGI:5428826 NCBI chr10:79,972,550...79,987,074
Ensembl chr10:79,972,556...79,987,085
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) RGD PMID:22865452 NCBI chr  X:58,477,471...58,553,932
Ensembl chr  X:58,486,554...58,553,557
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3692363|PMID:16606348)
GO_REF:0000024
(PMID:21852536)
Ensembl
RGD
UniProt
PMID:16606348 PMID:21852536 GO_REF:0000024 GO_REF:0000107 MGI:3692363 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    metabolic process 11736
      organic substance metabolic process 11278
        thioester metabolic process 91
          acyl-CoA metabolic process 91
            acetyl-CoA metabolic process 38
              acetyl-CoA biosynthetic process 20
                acetyl-CoA biosynthetic process from pyruvate 13
                  mitochondrial acetyl-CoA biosynthetic process from pyruvate 3
                  regulation of acetyl-CoA biosynthetic process from pyruvate 4
Path 2
Term Annotations click to browse term
  biological_process 19390
    metabolic process 11736
      cellular metabolic process 10656
        cellular aromatic compound metabolic process 5581
          nucleobase-containing compound metabolic process 5360
            nucleobase-containing small molecule metabolic process 573
              nucleoside phosphate metabolic process 505
                nucleotide metabolic process 497
                  ribonucleotide metabolic process 414
                    purine ribonucleotide metabolic process 395
                      purine ribonucleotide biosynthetic process 166
                        acyl-CoA biosynthetic process 34
                          acetyl-CoA biosynthetic process 20
                            acetyl-CoA biosynthetic process from pyruvate 13
                              mitochondrial acetyl-CoA biosynthetic process from pyruvate 3
                              regulation of acetyl-CoA biosynthetic process from pyruvate 4
paths to the root