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ONTOLOGY REPORT - ANNOTATIONS


Term:glycerol metabolic process
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Accession:GO:0006071 term browser browse the term
Definition:The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.
Synonyms:exact_synonym: glycerol metabolism
 xref: MetaCyc:GLYCEROLMETAB-PWY



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glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin-like 3 involved_in ISO (PMID:12565906) RGD PMID:12565906 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957
JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase involved_in ISO
IEA
UniProtKB:P32378 (PMID:15153069)
GO_REF:0000107
RGD
Ensembl
PMID:15153069 GO_REF:0000107 NCBI chr14:8,941,429...8,961,418
Ensembl chr14:8,941,461...8,960,891
JBrowse link
G Coq3 coenzyme Q3 methyltransferase involved_in ISO UniProtKB:P27680 (PMID:10777520) RGD PMID:10777520 NCBI chr 5:35,429,567...35,460,613
Ensembl chr 5:35,429,574...35,460,607
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:1919192|MGI:3055139 (PMID:24177035) RGD PMID:24177035 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Gk glycerol kinase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:8499898)
MGI:2429928 (PMID:16105550), (PMID:21536471), (PMID:9302256)
GO_REF:0000033
RGD
GO_Central
PMID:8499898 PMID:9302256 PMID:16105550 PMID:21536471 GO_REF:0000033 NCBI chr  X:50,162,089...50,238,707
Ensembl chr  X:50,163,123...50,238,631
JBrowse link
G Gk2 glycerol kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473
JBrowse link
G Gk5 glycerol kinase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:96,682,469...96,751,407
Ensembl chr 8:96,682,470...96,749,166
JBrowse link
G Gykl1 glycerol kinase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:46,124,207...46,126,126
Ensembl chr18:46,124,199...46,127,077
JBrowse link
G Mogat1 monoacylglycerol O-acyltransferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:79,980,963...79,988,513
Ensembl chr 9:79,956,649...79,988,513
JBrowse link
G Myof myoferlin acts_upstream_of_or_within ISO MGI:1349385 (PMID:24177035) RGD PMID:24177035 NCBI chr 1:235,673,666...235,822,413
Ensembl chr 1:235,673,666...235,822,334
JBrowse link
G Pla2g4a phospholipase A2 group 4A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Shpk sedoheptulokinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:57,817,551...57,841,981
Ensembl chr10:57,817,629...57,841,980
JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:207,238,230...207,253,035
Ensembl chr 1:207,236,557...207,252,737
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
PMID:17545671
GO_REF:0000107
(PMID:17545671)
Ensembl
RGD
PMID:17545671 PMID:17545671 GO_REF:0000107, RGD:8553472 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO
IEA
IDA
(PMID:26755581)
GO_REF:0000107
(MGI:5707518|PMID:26755581)
RGD
Ensembl
PMID:26755581 PMID:26755581 GO_REF:0000107 MGI:5707518, RGD:10679995 NCBI chr10:13,495,232...13,497,858
Ensembl chr10:13,494,291...13,497,858
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
PMID:4186849
GO_REF:0000033
MGI:2182390 (PMID:11792850)
GO_Central
RGD
PMID:11792850 PMID:4186849 GO_REF:0000033, RGD:8553288 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:50,162,089...50,238,707
Ensembl chr  X:50,163,123...50,238,631
JBrowse link
G Gk2 glycerol kinase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473
JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:96,682,469...96,751,407
Ensembl chr 8:96,682,470...96,749,166
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:41,800,552...41,937,729
Ensembl chr 3:41,801,930...41,936,901
JBrowse link
G Gykl1 glycerol kinase-like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:46,124,207...46,126,126
Ensembl chr18:46,124,199...46,127,077
JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:207,238,230...207,253,035
Ensembl chr 1:207,236,557...207,252,737
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,615,283...157,618,813
Ensembl chr 4:157,615,386...157,619,541
JBrowse link
G Tpi1l1 triosephosphate isomerase 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:23,647,760...23,654,967
Ensembl chr 8:23,647,764...23,655,504
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      primary metabolic process 10131
        carbohydrate metabolic process 625
          alditol metabolic process 26
            glycerol metabolic process 22
              glycerol biosynthetic process + 5
              glycerol catabolic process + 8
              glycerol to glycerone phosphate metabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      small molecule metabolic process 1878
        alcohol metabolic process 383
          polyol metabolic process 112
            alditol metabolic process 26
              glycerol metabolic process 22
                glycerol biosynthetic process + 5
                glycerol catabolic process + 8
                glycerol to glycerone phosphate metabolic process 0
paths to the root