Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:alcohol metabolic process
go back to main search page
Accession:GO:0006066 term browser browse the term
Definition:The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
Synonyms:exact_synonym: alcohol metabolism

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
alcohol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101969633 dehydrogenase/reductase SDR family member 4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:481,510...493,330
Ensembl chrNW_004936722:481,481...493,405 		JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177
Ensembl chrNW_004936520:3,760,755...3,775,873 		JBrowse link
6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Renbp renin binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936809:817,392...823,926
Ensembl chrNW_004936809:817,355...823,941 		JBrowse link
alcohol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177
Ensembl chrNW_004936520:3,760,755...3,775,873 		JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
G LOC101968373 cytochrome P450 11B3, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:9,034,177...9,039,486 JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:3,446,864...3,478,434
Ensembl chrNW_004936511:3,446,839...3,478,434 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28567665) Ensembl
MGI		 PMID:28567665 GO_REF:0000107 NCBI chrNW_004936501:8,021,090...8,065,245
Ensembl chrNW_004936501:8,020,316...8,065,332 		JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936569:1,213,700...1,250,181
Ensembl chrNW_004936569:1,213,573...1,250,589 		JBrowse link
G LOC101972957 vitamin D 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:3,881,630...3,897,613
Ensembl chrNW_004936528:3,881,087...3,900,302 		JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104 		JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8647961) Ensembl
MGI		 PMID:8647961 GO_REF:0000107 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854 		JBrowse link
G Cftr CF transmembrane conductance regulator acts_upstream_of_or_within ISO (PMID:17085523) MGI PMID:17085523 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11519011)
(PMID:14684813), (PMID:16321981), (PMID:16513830)		 MGI
Ensembl		 PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000107 NCBI chrNW_004936522:6,423,561...6,447,363
Ensembl chrNW_004936522:6,423,561...6,444,814 		JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:11171067 GO_REF:0000107 GO_REF:0000118 RGD:628445 NCBI chrNW_004936721:508,716...515,968
Ensembl chrNW_004936721:509,374...515,918 		JBrowse link
G Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO RGD PMID:16440058 RGD:1626611 NCBI chrNW_004936628:3,599,435...3,600,061 JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,269,900...1,285,853
Ensembl chrNW_004936809:1,269,914...1,285,889 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15845870), (PMID:7798939), (PMID:8647961) Ensembl
MGI
UniProt		 PMID:7798939 PMID:8647961 PMID:15845870 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936549:1,378,536...1,400,501
Ensembl chrNW_004936549:1,378,736...1,400,532 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936480:18,862,288...18,882,614
Ensembl chrNW_004936480:18,862,238...18,882,616 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936627:4,451,847...4,473,163
Ensembl chrNW_004936627:4,451,823...4,473,223 		JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12829805) Ensembl
MGI
TreeGrafter		 PMID:12829805 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936831:951,603...976,159
Ensembl chrNW_004936831:951,562...977,208 		JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:13,054,155...13,061,935 JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:13,086,928...13,092,291
Ensembl chrNW_004936484:13,088,030...13,092,291 		JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI
TreeGrafter		 PMID:16955138 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936527:9,684,304...9,696,951
Ensembl chrNW_004936527:9,685,695...9,692,830 		JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI
TreeGrafter		 PMID:16955138 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:52,120,063...52,140,646
Ensembl chrNW_004936469:52,117,733...52,140,765 		JBrowse link
G Lbr lamin B receptor involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936526:2,254,463...2,282,785
Ensembl chrNW_004936526:2,254,449...2,282,785 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101962805 NADH-cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936718:552,369...564,195
Ensembl chrNW_004936718:549,938...564,195 		JBrowse link
G LOC101970547 isopentenyl-diphosphate Delta-isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:10,541,992...10,542,792 JBrowse link
G LOC101971285 7-dehydrocholesterol reductase involved_in ISO (PMID:9465114) RGD
UniProt		 PMID:9465114 PMID:9831636 PMID:10329655 RGD:2316918 RGD:632010 NCBI chrNW_004936794:1,432,379...1,468,966 JBrowse link
G Lss lanosterol synthase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:1429550 PMID:16440058 GO_REF:0000107 GO_REF:0000118 RGD:1626611 RGD:2316919 NCBI chrNW_004936778:323,120...351,100
Ensembl chrNW_004936778:323,014...351,102 		JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936641:1,030,465...1,035,967
Ensembl chrNW_004936641:1,030,595...1,035,954 		JBrowse link
G Mvk mevalonate kinase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936769:1,274,595...1,295,186
Ensembl chrNW_004936769:1,274,540...1,298,178 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chrNW_004936478:19,434,557...19,452,245
Ensembl chrNW_004936478:19,434,557...19,452,248 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:4,473,554...4,482,396
Ensembl chrNW_004936580:4,473,359...4,482,631 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:9329978) Ensembl
MGI		 PMID:9329978 GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776 		JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:4,253,725...4,258,198
Ensembl chrNW_004936599:4,253,735...4,258,071 		JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955024 lanosterol 14-alpha demethylase ISO RGD PMID:7581240 RGD:2316902 NCBI chrNW_004936621:2,209,255...2,232,404
Ensembl chrNW_004936621:2,209,199...2,232,531 		JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,423,561...6,447,363
Ensembl chrNW_004936522:6,423,561...6,444,814 		JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msmo1 methylsterol monooxygenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936555:664,171...678,082
Ensembl chrNW_004936555:664,158...678,208 		JBrowse link
G Sc5d sterol-C5-desaturase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7961720 GO_REF:0000118 RGD:2316911 NCBI chrNW_004936542:6,046,425...6,062,825
Ensembl chrNW_004936542:6,046,390...6,059,074 		JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1 member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:2,486,219...2,522,796
Ensembl chrNW_004936592:2,491,681...2,522,796 		JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:9826706) MGI PMID:9826706 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chrNW_004936501:13,363,630...13,367,553
Ensembl chrNW_004936501:13,363,576...13,367,553 		JBrowse link
G LOC101961079 cholesterol 24-hydroxylase involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936604:3,451,853...3,490,688
Ensembl chrNW_004936604:3,451,842...3,491,159 		JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,213,700...1,250,181
Ensembl chrNW_004936569:1,213,573...1,250,589 		JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11279518), (PMID:15845870) Ensembl
MGI
InterPro		 PMID:11279518 PMID:15845870 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936496:4,599,138...4,605,653
Ensembl chrNW_004936496:4,599,138...4,605,653 		JBrowse link
G LOC101972335 24-hydroxycholesterol 7-alpha-hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10748047) Ensembl
MGI		 PMID:10748047 GO_REF:0000107 NCBI chrNW_004936476:13,697,598...13,819,362
Ensembl chrNW_004936476:13,697,583...13,819,109 		JBrowse link
G Scarb1 scavenger receptor class B member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10559220)
(PMID:11278646)		 Ensembl
MGI		 PMID:10559220 PMID:11278646 GO_REF:0000107 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11559713) Ensembl
MGI		 PMID:11559713 GO_REF:0000107 NCBI chrNW_004936559:7,177,887...7,312,660
Ensembl chrNW_004936559:7,177,904...7,312,741 		JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:8,467,035...8,549,893
Ensembl chrNW_004936541:8,463,436...8,539,942 		JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,620,763...1,678,561
Ensembl chrNW_004936500:1,620,641...1,678,607 		JBrowse link
G Angptl3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:286,432...295,021
Ensembl chrNW_004936692:286,717...294,822 		JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:17920016) MGI PMID:17920016 NCBI chrNW_004936572:2,205,527...2,277,786
Ensembl chrNW_004936572:2,205,478...2,277,842 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10357841), (PMID:15466405), (PMID:17071966), (PMID:7751823), (PMID:9327769), (PMID:9795222)
(PMID:15995171)		 Ensembl
MGI
UniProt		 PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15466405 More... GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10357838)
(PMID:10357838), (PMID:8647961)		 Ensembl
MGI
TreeGrafter		 PMID:8647961 PMID:10357838 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936903:520,420...521,726
Ensembl chrNW_004936903:520,650...521,910 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,098,683...2,101,127
Ensembl chrNW_004936542:2,098,683...2,101,127 		JBrowse link
G Apob apolipoprotein B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:10,509,118...10,549,144
Ensembl chrNW_004936493:10,509,118...10,549,144 		JBrowse link
G Apoc1 apolipoprotein C1 acts_upstream_of_or_within ISO (PMID:7848292) MGI PMID:7848292 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoc3 apolipoprotein C3 acts_upstream_of_or_within ISO (PMID:11590213), (PMID:8089130)
(PMID:8864964)		 MGI PMID:8089130 PMID:8864964 PMID:11590213 NCBI chrNW_004936542:2,106,927...2,108,412
Ensembl chrNW_004936542:2,106,318...2,108,603 		JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within		 ISO (PMID:9649566)
(PMID:1423598), (PMID:8647961)
(PMID:3771793)		 BHF-UCL
MGI		 PMID:1423598 PMID:3771793 PMID:8647961 PMID:9649566 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17920016) Ensembl
MGI		 PMID:17920016 GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Cat catalase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:5087482) Ensembl
MGI		 PMID:5087482 GO_REF:0000107 NCBI chrNW_004936533:3,601,270...3,637,128
Ensembl chrNW_004936533:3,600,955...3,637,422 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (PMID:18974039) MGI PMID:18974039 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Cetp cholesteryl ester transfer protein involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:9,115,126...9,133,071
Ensembl chrNW_004936475:9,115,120...9,133,073 		JBrowse link
G Ch25h cholesterol 25-hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9852097) Ensembl
MGI
TreeGrafter		 PMID:9852097 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936601:5,015,922...5,016,942
Ensembl chrNW_004936601:5,015,219...5,160,908 		JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:28,069,058...28,084,607
Ensembl chrNW_004936471:28,070,462...28,084,648 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936615:993,092...999,976
Ensembl chrNW_004936615:985,634...1,003,172 		JBrowse link
G Dhcr24 24-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407971) Ensembl
MGI		 PMID:16407971 GO_REF:0000107 NCBI chrNW_004936522:6,423,561...6,447,363
Ensembl chrNW_004936522:6,423,561...6,444,814 		JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:508,716...515,968
Ensembl chrNW_004936721:509,374...515,918 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936636:80,583...116,027
Ensembl chrNW_004936636:80,564...116,694 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936710:1,193,679...1,210,059
Ensembl chrNW_004936710:1,193,411...1,210,739 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22912762)
(PMID:28053990)		 Ensembl
MGI		 PMID:22912762 PMID:28053990 GO_REF:0000107 NCBI chrNW_004936623:2,457,709...2,462,956
Ensembl chrNW_004936623:2,456,294...2,462,467 		JBrowse link
G Fdx1 ferredoxin 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936612:3,878,179...3,905,678
Ensembl chrNW_004936612:3,874,748...3,905,825 		JBrowse link
G Fdxr ferredoxin reductase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936594:215,165...223,715
Ensembl chrNW_004936594:215,155...223,771 		JBrowse link
G Fech ferrochelatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11160364) Ensembl
MGI		 PMID:11160364 GO_REF:0000107 NCBI chrNW_004936497:6,755,626...6,788,568
Ensembl chrNW_004936497:6,755,553...6,790,944 		JBrowse link
G Fgl1 fibrinogen like 1 acts_upstream_of_or_within ISO (PMID:23483972) MGI PMID:23483972 NCBI chrNW_004936614:431,537...452,174
Ensembl chrNW_004936614:431,631...450,034 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936480:18,862,288...18,882,614
Ensembl chrNW_004936480:18,862,238...18,882,616 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936627:4,451,847...4,473,163
Ensembl chrNW_004936627:4,451,823...4,473,223 		JBrowse link
G Hnf1a HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11279518) Ensembl
MGI		 PMID:11279518 GO_REF:0000107 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:13,054,155...13,061,935 JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:13,086,928...13,092,291
Ensembl chrNW_004936484:13,088,030...13,092,291 		JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) UniProt
MGI
Ensembl		 PMID:16100574 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936527:9,684,304...9,696,951
Ensembl chrNW_004936527:9,685,695...9,692,830 		JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) UniProt
MGI
Ensembl		 PMID:16100574 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936469:52,120,063...52,140,646
Ensembl chrNW_004936469:52,117,733...52,140,765 		JBrowse link
G Lbr lamin B receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936526:2,254,463...2,282,785
Ensembl chrNW_004936526:2,254,449...2,282,785 		JBrowse link
G Lcat lecithin-cholesterol acyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9300780)
(PMID:10559507)		 RGD
MGI
UniProt
Ensembl		 PMID:746355 PMID:9300780 PMID:10559507 GO_REF:0000043 GO_REF:0000107 RGD:1581789 NCBI chrNW_004936475:18,294,013...18,297,433
Ensembl chrNW_004936475:18,293,716...18,298,248 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17071966) Ensembl
MGI
UniProt		 PMID:17071966 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777 		JBrowse link
G Lep leptin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171) Ensembl
MGI		 PMID:15995171 GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171) Ensembl
MGI		 PMID:15995171 GO_REF:0000107 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444 		JBrowse link
G Lipc lipase C, hepatic type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10357838) Ensembl
MGI		 PMID:10357838 GO_REF:0000107 NCBI chrNW_004936471:19,604,083...19,733,721
Ensembl chrNW_004936471:19,703,236...19,733,686 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936706:122,939...139,506
Ensembl chrNW_004936706:128,133...141,276 		JBrowse link
G LOC101955024 lanosterol 14-alpha demethylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936621:2,209,255...2,232,404
Ensembl chrNW_004936621:2,209,199...2,232,531 		JBrowse link
G LOC101957714 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:1,467,460...1,480,185
Ensembl chrNW_004936514:1,467,261...1,480,185 		JBrowse link
G LOC101958515 apolipoprotein F acts_upstream_of_or_within ISO (PMID:22363685) MGI PMID:22363685 NCBI chrNW_004936646:764,689...766,265 JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101962805 NADH-cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936718:552,369...564,195
Ensembl chrNW_004936718:549,938...564,195 		JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:2175615 GO_REF:0000118 RGD:1299597 NCBI chrNW_004936569:1,213,700...1,250,181
Ensembl chrNW_004936569:1,213,573...1,250,589 		JBrowse link
G LOC101968373 cytochrome P450 11B3, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:9,034,177...9,039,486 JBrowse link
G LOC101970547 isopentenyl-diphosphate Delta-isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:10,541,992...10,542,792 JBrowse link
G LOC101970597 sulfotransferase 1C1 involved_in ISO (PMID:28992322) UniProt PMID:28992322 NCBI chrNW_004936729:1,783,124...1,796,723
Ensembl chrNW_004936729:1,783,105...1,796,740 		JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936496:4,599,138...4,605,653
Ensembl chrNW_004936496:4,599,138...4,605,653 		JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:33,367,810...33,380,764
Ensembl chrNW_004936471:33,367,810...33,380,764 		JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104 		JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within ISO (PMID:17920016) MGI PMID:17920016 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12509515) Ensembl
MGI		 PMID:12509515 GO_REF:0000107 NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321 		JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936641:1,030,465...1,035,967
Ensembl chrNW_004936641:1,030,595...1,035,954 		JBrowse link
G Mvk mevalonate kinase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936769:1,274,595...1,295,186
Ensembl chrNW_004936769:1,274,540...1,298,178 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:13,265,269...13,279,164
Ensembl chrNW_004936490:13,266,347...13,279,206 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10369263) Ensembl
MGI		 PMID:10369263 GO_REF:0000107 NCBI chrNW_004936714:246,574...273,930
Ensembl chrNW_004936714:246,551...273,912 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242417) UniProt
MGI
Ensembl		 PMID:17242417 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
G Pctp phosphatidylcholine transfer protein acts_upstream_of_or_within ISO (PMID:15845870) MGI PMID:15845870 NCBI chrNW_004936490:6,902,959...6,929,051
Ensembl chrNW_004936490:6,902,957...6,929,098 		JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:669,407...673,004
Ensembl chrNW_004936877:669,374...673,172 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:25429154) MGI PMID:25429154 NCBI chrNW_004936724:1,747,015...1,780,298
Ensembl chrNW_004936724:1,747,005...1,778,141 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936580:4,473,554...4,482,396
Ensembl chrNW_004936580:4,473,359...4,482,631 		JBrowse link
G Pon1 paraoxonase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9685159) Ensembl
MGI		 PMID:9685159 GO_REF:0000107 NCBI chrNW_004936585:4,954,871...4,979,560
Ensembl chrNW_004936585:4,954,869...4,979,591 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Scap SREBF chaperone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11358865) Ensembl
MGI
UniProt		 PMID:11358865 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936596:1,124,573...1,180,219
Ensembl chrNW_004936596:1,122,042...1,180,297 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Soat1 sterol O-acyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9756919)
(PMID:15845870)		 MGI
TreeGrafter
Ensembl
UniProt		 PMID:9756919 PMID:15845870 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936481:9,614,605...9,669,705
Ensembl chrNW_004936481:9,616,850...9,669,705 		JBrowse link
G Soat2 sterol O-acyltransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9756919) RGD
MGI
TreeGrafter
UniProt
Ensembl		 PMID:9756919 PMID:12217884 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:625687 NCBI chrNW_004936512:10,420,847...10,430,813
Ensembl chrNW_004936512:10,420,804...10,430,881 		JBrowse link
G Sqle squalene epoxidase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:9300786 GO_REF:0000118 RGD:1625701 NCBI chrNW_004936470:22,726,793...22,752,429
Ensembl chrNW_004936470:22,725,888...22,752,500 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO RGD PMID:18071061 RGD:1643359 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776 		JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936710:1,523,289...1,530,181
Ensembl chrNW_004936710:1,523,355...1,529,672 		JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,626,810...2,655,290
Ensembl chrNW_004936664:2,626,764...2,655,340 		JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936599:4,253,725...4,258,198
Ensembl chrNW_004936599:4,253,735...4,258,071 		JBrowse link
G Tnfsf4 TNF superfamily member 4 acts_upstream_of_or_within ISO (PMID:3473481) MGI PMID:3473481 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:5,434,912...5,487,354
Ensembl chrNW_004936498:5,434,911...5,447,147 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502 		JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)		 UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
cortisol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,882,663...17,888,708
Ensembl chrNW_004936475:17,882,575...17,887,748 		JBrowse link
G LOC101957714 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:1,467,460...1,480,185
Ensembl chrNW_004936514:1,467,261...1,480,185 		JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936569:1,213,700...1,250,181
Ensembl chrNW_004936569:1,213,573...1,250,589 		JBrowse link
G LOC101968373 cytochrome P450 11B3, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:9,034,177...9,039,486 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:33,367,810...33,380,764
Ensembl chrNW_004936471:33,367,810...33,380,764 		JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104 		JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chrNW_004936526:2,589,254...2,652,831
Ensembl chrNW_004936526:2,614,059...2,653,286 		JBrowse link
diol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp2 LDL receptor related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10052453) Ensembl
MGI		 PMID:10052453 GO_REF:0000107 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC106145632 diphosphoinositol polyphosphate phosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:24,722,448...24,772,183
Ensembl chrNW_004936476:24,668,660...24,769,766 		JBrowse link
diphosphoinositol polyphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101962175 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936909:199,863...205,318
Ensembl chrNW_004936909:199,861...205,356 		JBrowse link
G LOC106145632 diphosphoinositol polyphosphate phosphohydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:24,722,448...24,772,183
Ensembl chrNW_004936476:24,668,660...24,769,766 		JBrowse link
G Nudt4 nudix hydrolase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936507:9,861,971...9,868,763 JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:10,914,018...10,949,138
Ensembl chrNW_004936474:10,913,903...10,950,095 		JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25066056) MGI
TreeGrafter
Ensembl
InterPro		 PMID:25066056 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936658:695,431...718,891
Ensembl chrNW_004936658:695,609...718,746 		JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:17,727,418...17,744,780
Ensembl chrNW_004936482:17,727,310...17,745,225 		JBrowse link
dolichol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ISO RGD PMID:8280061 RGD:1624315 NCBI chrNW_004936542:4,049,107...4,054,100
Ensembl chrNW_004936542:4,048,979...4,054,105 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in		 ISO (PMID:9535917)
(PMID:10835346)
(PMID:9535917), (PMID:9724629)		 RGD
MGI
ComplexPortal		 PMID:2844175 PMID:9535917 PMID:9724629 PMID:10835346 RGD:1601442 NCBI chrNW_004936514:3,832,284...3,850,064 JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:9724629 MGI
Ensembl
InterPro
UniProt		 PMID:9724629 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 RGD:69827 NCBI chrNW_004936487:15,565,151...15,567,856
Ensembl chrNW_004936487:15,565,176...15,567,881 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,664,653...4,665,199
Ensembl chrNW_004936580:4,664,653...4,665,188 		JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936482:17,727,418...17,744,780
Ensembl chrNW_004936482:17,727,310...17,745,225 		JBrowse link
dolichol-linked oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase involved_in ISO (PMID:14973778) UniProt PMID:14973778 NCBI chrNW_004936530:4,948,130...4,957,306 JBrowse link
G Alg10 ALG10 alpha-1,2-glucosyltransferase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936607:2,404,592...2,409,774 JBrowse link
G Alg12 ALG12 alpha-1,6-mannosyltransferase acts_upstream_of_or_within ISO (PMID:11983712) MGI PMID:11983712 NCBI chrNW_004936629:844,277...864,874 JBrowse link
G Alg13 ALG13 UDP-N-acetylglucosaminyltransferase subunit involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936499:3,558,273...3,629,570
Ensembl chrNW_004936499:3,558,236...3,629,592 		JBrowse link
G Alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936537:4,161,095...4,247,085
Ensembl chrNW_004936537:4,160,941...4,246,243 		JBrowse link
G Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,725,444...7,730,869
Ensembl chrNW_004936524:7,725,438...7,731,486 		JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 involved_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:8280061 GO_REF:0000002 GO_REF:0000107 RGD:1624315 NCBI chrNW_004936542:4,049,107...4,054,100
Ensembl chrNW_004936542:4,048,979...4,054,105 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:3,832,284...3,850,064 JBrowse link
G Mpdu1 mannose-P-dolichol utilization defect 1 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936595:862,240...865,505
Ensembl chrNW_004936595:862,241...866,607 		JBrowse link
G Rft1 RFT1 homolog involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:3,807,895...3,856,760
Ensembl chrNW_004936473:3,814,112...3,856,792 		JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:17,727,418...17,744,780
Ensembl chrNW_004936482:17,727,310...17,745,225 		JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,914,018...10,949,138
Ensembl chrNW_004936474:10,913,903...10,950,095 		JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:695,431...718,891
Ensembl chrNW_004936658:695,609...718,746 		JBrowse link
doxorubicin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,680,736...26,696,996
Ensembl chrNW_004936474:26,680,676...26,697,214 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in ISO (PMID:20837989) UniProt PMID:20837989 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
G Cbr4 carbonyl reductase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:1,184,859...1,205,668
Ensembl chrNW_004936516:1,181,524...1,205,760 		JBrowse link
G LOC101954786 aldo-keto reductase family 1 member C1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:9,312,113...9,329,269 JBrowse link
G LOC101974041 aflatoxin B1 aldehyde reductase member 2 involved_in ISO (PMID:20837989) UniProt PMID:20837989 NCBI chrNW_004936474:5,565,715...5,573,048 JBrowse link
ergosterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:11,255,871...11,273,848
Ensembl chrNW_004936489:11,255,871...11,283,216 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936549:1,378,536...1,400,501
Ensembl chrNW_004936549:1,378,736...1,400,532 		JBrowse link
G Lbr lamin B receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936526:2,254,463...2,282,785
Ensembl chrNW_004936526:2,254,449...2,282,785 		JBrowse link
G LOC101959426 NADH-cytochrome b5 reductase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936522:6,982,427...7,006,308
Ensembl chrNW_004936522:6,982,396...7,006,406 		JBrowse link
G Lss lanosterol synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936778:323,120...351,100
Ensembl chrNW_004936778:323,014...351,102 		JBrowse link
G Msmo1 methylsterol monooxygenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936555:664,171...678,082
Ensembl chrNW_004936555:664,158...678,208 		JBrowse link
G Mvk mevalonate kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936769:1,274,595...1,295,186
Ensembl chrNW_004936769:1,274,540...1,298,178 		JBrowse link
G Sc5d sterol-C5-desaturase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936542:6,046,425...6,062,825
Ensembl chrNW_004936542:6,046,390...6,059,074 		JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:2,717,885...2,720,874
Ensembl chrNW_004936524:2,715,769...2,721,085 		JBrowse link
G Sqle squalene epoxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:22,726,793...22,752,429
Ensembl chrNW_004936470:22,725,888...22,752,500 		JBrowse link
ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10358022) Ensembl
MGI		 PMID:10358022 GO_REF:0000107 NCBI chrNW_004936520:3,467,003...3,489,754
Ensembl chrNW_004936520:3,467,003...3,490,997 		JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
ethanol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide ISO RGD PMID:10829036 RGD:631904 NCBI chrNW_004936520:3,467,003...3,489,754
Ensembl chrNW_004936520:3,467,003...3,490,997 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member ISO protein:altered expression, altered activity:liver (rat) RGD PMID:28688179 RGD:14981582 NCBI chrNW_004936558:4,362,693...4,387,705
Ensembl chrNW_004936558:4,362,654...4,390,414 		JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177
Ensembl chrNW_004936520:3,760,755...3,775,873 		JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha ISO RGD PMID:1577786 RGD:61551 NCBI chrNW_004936599:2,031,953...2,068,423
Ensembl chrNW_004936599:2,001,673...2,067,399 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:5,177,511...5,193,484
Ensembl chrNW_004936501:5,176,909...5,193,543 		JBrowse link
galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10915771) Ensembl
MGI		 PMID:10915771 GO_REF:0000107 NCBI chrNW_004936594:944,936...950,537
Ensembl chrNW_004936594:944,944...949,838 		JBrowse link
gentamycin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:11231357 RGD:7243145 NCBI chrNW_004936597:1,667,700...1,684,533
Ensembl chrNW_004936597:1,667,569...1,684,539 		JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17545671) Ensembl
MGI		 PMID:17545671 GO_REF:0000107 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932 		JBrowse link
G Lep leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO (PMID:26755581)
(MGI:5707518|PMID:26755581)		 UniProt PMID:26755581 MGI:5707518 RGD:10679995 NCBI chrNW_004936694:1,834,016...1,836,359 JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11792850) Ensembl
MGI
TreeGrafter		 PMID:11792850 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328 		JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936553:6,707,148...6,787,245 JBrowse link
G Gk2 glycerol kinase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936676:2,917,525...2,919,435 JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936540:3,835,859...3,908,948
Ensembl chrNW_004936540:3,835,635...3,908,954 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936581:1,697,965...1,710,363
Ensembl chrNW_004936581:1,697,947...1,710,738 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936709:948,151...951,430
Ensembl chrNW_004936709:945,201...951,441 		JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:286,432...295,021
Ensembl chrNW_004936692:286,717...294,822 		JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase involved_in ISO (PMID:15153069) UniProt PMID:15153069 NCBI chrNW_004936738:1,354,424...1,371,497 JBrowse link
G Coq3 coenzyme Q3, methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936651:983,397...1,000,669
Ensembl chrNW_004936651:979,053...1,000,871 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936498:4,514,212...4,544,523
Ensembl chrNW_004936498:4,514,184...4,544,527 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (PMID:24177035) MGI PMID:24177035 NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519 		JBrowse link
G Gk glycerol kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16105550), (PMID:21536471), (PMID:9302256) Ensembl
MGI
TreeGrafter
UniProt		 PMID:9302256 PMID:16105550 PMID:21536471 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936553:6,707,148...6,787,245 JBrowse link
G Gk2 glycerol kinase 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936676:2,917,525...2,919,435 JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936540:3,835,859...3,908,948
Ensembl chrNW_004936540:3,835,635...3,908,954 		JBrowse link
G Mogat1 monoacylglycerol O-acyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936569:4,625,981...4,665,930
Ensembl chrNW_004936569:4,625,867...4,662,861 		JBrowse link
G Myof myoferlin acts_upstream_of_or_within ISO (PMID:24177035) MGI PMID:24177035 NCBI chrNW_004936601:1,489,252...1,640,536
Ensembl chrNW_004936601:1,489,327...1,640,026 		JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936481:3,559,377...3,689,797
Ensembl chrNW_004936481:3,559,358...3,689,833 		JBrowse link
G Shpk sedoheptulokinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936677:314,328...342,892
Ensembl chrNW_004936677:314,294...342,855 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936581:1,697,965...1,710,363
Ensembl chrNW_004936581:1,697,947...1,710,738 		JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:11,435,151...11,486,042
Ensembl chrNW_004936485:11,435,151...11,486,042 		JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936656:2,598,454...2,616,643
Ensembl chrNW_004936656:2,598,413...2,618,396 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936626:268,788...310,781
Ensembl chrNW_004936626:268,727...310,787 		JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:2,815,782...2,819,100
Ensembl chrNW_004936596:2,815,821...2,819,020 		JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936629:355,517...357,678
Ensembl chrNW_004936629:355,362...357,697 		JBrowse link
inositol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936656:2,598,454...2,616,643
Ensembl chrNW_004936656:2,598,413...2,618,396 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936626:268,788...310,781
Ensembl chrNW_004936626:268,727...310,787 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10454357) Ensembl
MGI		 PMID:10454357 GO_REF:0000107 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17237885) Ensembl
MGI		 PMID:17237885 GO_REF:0000107 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:6,707,865...6,751,064
Ensembl chrNW_004936471:6,707,893...6,751,045 		JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936523:1,321,755...1,418,267
Ensembl chrNW_004936523:1,331,487...1,418,290 		JBrowse link
G Slc5a3 solute carrier family 5 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16644257), (PMID:18675571) TreeGrafter
MGI		 PMID:16644257 PMID:18675571 GO_REF:0000118 NCBI chrNW_004936500:8,284,631...8,296,387 JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936529:1,338,812...1,396,981
Ensembl chrNW_004936529:1,338,812...1,396,965 		JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:487,277...515,614
Ensembl chrNW_004936529:486,879...515,674 		JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11502751) MGI
TreeGrafter
InterPro
Ensembl		 PMID:11502751 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:25,208,332...25,231,236
Ensembl chrNW_004936476:25,208,284...25,231,281 		JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15939867) InterPro
MGI
TreeGrafter		 PMID:15939867 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153 		JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:2,200,588...2,254,130
Ensembl chrNW_004936487:2,198,973...2,254,151 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936526:3,378,046...3,477,177
Ensembl chrNW_004936526:3,376,786...3,477,554 		JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936661:3,006,506...3,023,355
Ensembl chrNW_004936661:3,006,505...3,022,823 		JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:6,707,865...6,751,064
Ensembl chrNW_004936471:6,707,893...6,751,045 		JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936523:1,321,755...1,418,267
Ensembl chrNW_004936523:1,331,487...1,418,290 		JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:15707678 RGD:9743914 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816 		JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:18056380 RGD:2292524 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Synj2 synaptojanin 2 ISO RGD PMID:9388224 RGD:69390 NCBI chrNW_004936489:9,848,070...9,911,952
Ensembl chrNW_004936489:9,848,062...9,908,760 		JBrowse link
inositol phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galr2 galanin receptor 2 ISO RGD PMID:9427506 RGD:69840 NCBI chrNW_004936594:1,236,281...1,239,213
Ensembl chrNW_004936594:1,236,061...1,239,113 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:17573483 RGD:5685371 NCBI chrNW_004936657:425,902...522,331
Ensembl chrNW_004936657:426,787...521,198 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B ISO RGD PMID:1331748 RGD:9727450 NCBI chrNW_004936525:5,711,894...5,729,074
Ensembl chrNW_004936525:5,712,329...5,729,831 		JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:487,277...515,614
Ensembl chrNW_004936529:486,879...515,674 		JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9013981) Ensembl
MGI		 PMID:9013981 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098 		JBrowse link
G Ptafr platelet activating factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9013981) Ensembl
MGI		 PMID:9013981 GO_REF:0000107 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099 		JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004936522:8,004,503...8,110,995
Ensembl chrNW_004936522:8,005,442...8,110,889 		JBrowse link
inositol trisphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inppl1 inositol polyphosphate phosphatase like 1 ISO RGD PMID:12933696 RGD:1626126 NCBI chrNW_004936498:1,524,128...1,539,680
Ensembl chrNW_004936498:1,524,128...1,540,578 		JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153 		JBrowse link
G Itpk1 inositol-tetrakisphosphate 1-kinase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936733:930,986...1,064,223
Ensembl chrNW_004936733:930,972...1,064,229 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,378,046...3,477,177
Ensembl chrNW_004936526:3,376,786...3,477,554 		JBrowse link
G Plcb1 phospholipase C beta 1 ISO RGD PMID:8387502 RGD:11535163 NCBI chrNW_004936485:10,548,966...11,254,139
Ensembl chrNW_004936485:10,548,966...11,253,761 		JBrowse link
G Plcb3 phospholipase C beta 3 ISO RGD PMID:8387502 RGD:11535163 NCBI chrNW_004936599:4,934,123...4,950,564
Ensembl chrNW_004936599:4,934,060...4,950,570 		JBrowse link
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:7812955 RGD:151356942 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581 		JBrowse link
isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 ISO RGD PMID:9712727 PMID:14674759 RGD:2306852 RGD:2306877 NCBI chrNW_004936492:407,482...452,538
Ensembl chrNW_004936492:407,482...452,537 		JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
Ensembl		 PMID:17447164 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1624966 NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936483:15,845,777...15,864,341
Ensembl chrNW_004936483:15,845,792...15,864,341 		JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:36,823,003...36,842,576
Ensembl chrNW_004936471:36,822,971...36,842,610 		JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:16,033,287...16,038,097
Ensembl chrNW_004936485:16,033,128...16,042,821 		JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936809:666,231...675,279
Ensembl chrNW_004936809:666,337...675,214 		JBrowse link
G LOC101964695 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936654:2,129,260...2,131,869 JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671 		JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671 		JBrowse link
N-acylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B acts_upstream_of_or_within ISO (PMID:16818490) MGI PMID:16818490 NCBI chrNW_004936722:1,658,287...1,671,848
Ensembl chrNW_004936722:1,658,302...1,671,853 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25596343) Ensembl
MGI
TreeGrafter		 PMID:25596343 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:5,177,511...5,193,484
Ensembl chrNW_004936501:5,176,909...5,193,543 		JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25596343) MGI
TreeGrafter
Ensembl		 PMID:25596343 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:4,032,412...4,079,243
Ensembl chrNW_004936490:4,031,163...4,079,347 		JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,391,204...12,397,877
Ensembl chrNW_004936501:12,391,314...12,397,864 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO PMID:22860206
(PMID:15655246), (PMID:30301806)		 UniProt PMID:15655246 PMID:22860206 PMID:30301806 RGD:39458030 NCBI chrNW_004936598:42,751...56,261 JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14634025)
(PMID:16818490)		 Ensembl
MGI
TreeGrafter		 PMID:14634025 PMID:16818490 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:20,259,260...20,293,116
Ensembl chrNW_004936479:20,275,319...20,292,688 		JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354 		JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,428,824...6,477,007
Ensembl chrNW_004936528:6,429,973...6,477,218 		JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:1917954) RGD
BHF-UCL		 PMID:1917954 PMID:9225228 RGD:10059686 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:80,583...116,027
Ensembl chrNW_004936636:80,564...116,694 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,193,679...1,210,059
Ensembl chrNW_004936710:1,193,411...1,210,739 		JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 acts_upstream_of_or_within ISO (PMID:17202134) MGI PMID:17202134 NCBI chrNW_004936484:13,086,928...13,092,291
Ensembl chrNW_004936484:13,088,030...13,092,291 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:10,345,154...10,352,873
Ensembl chrNW_004936500:10,345,154...10,352,867 		JBrowse link
negative regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:5,015,922...5,016,942
Ensembl chrNW_004936601:5,015,219...5,160,908 		JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354 		JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,428,824...6,477,007
Ensembl chrNW_004936528:6,429,973...6,477,218 		JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chrNW_004936596:2,815,782...2,819,100
Ensembl chrNW_004936596:2,815,821...2,819,020 		JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,762,421...12,818,249
Ensembl chrNW_004936491:12,762,328...12,818,306 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004936787:330,390...1,491,994
Ensembl chrNW_004936787:332,342...1,491,285 		JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936669:3,302,014...3,326,233
Ensembl chrNW_004936669:3,301,802...3,320,643 		JBrowse link
G LOC101967457 putative DBH-like monooxygenase protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936971:172,262...179,921 JBrowse link
G Moxd1 monooxygenase DBH like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936560:334,294...413,559
Ensembl chrNW_004936560:332,718...413,559 		JBrowse link
octopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase ISO RGD PMID:11521740 RGD:1625401 NCBI chrNW_004936669:3,302,014...3,326,233
Ensembl chrNW_004936669:3,301,802...3,320,643 		JBrowse link
pentitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31296900) Ensembl
MGI		 PMID:31296900 GO_REF:0000107 NCBI chrNW_004936664:577,109...586,848
Ensembl chrNW_004936664:578,126...586,795 		JBrowse link
phytol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936881:127,090...150,269
Ensembl chrNW_004936881:127,023...150,292 		JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936586:1,164,256...1,186,960
Ensembl chrNW_004936586:1,164,224...1,187,141 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
polyprenol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:17,727,418...17,744,780
Ensembl chrNW_004936482:17,727,310...17,745,225 		JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023 		JBrowse link
G Dab2 DAB adaptor protein 2 ISO RGD PMID:17303656 RGD:7243836 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664 		JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,620,763...1,678,561
Ensembl chrNW_004936500:1,620,641...1,678,607 		JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,090,282...4,106,025
Ensembl chrNW_004936542:4,091,283...4,105,370 		JBrowse link
G Fdps farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chrNW_004936580:4,799,354...4,808,406 JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194 		JBrowse link
G LOC101965545 NADPH--cytochrome P450 reductase ISO RGD PMID:19264869 RGD:2316785 NCBI chrNW_004936543:2,275,981...2,327,931
Ensembl chrNW_004936543:2,274,059...2,328,008 		JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004936496:4,599,138...4,605,653
Ensembl chrNW_004936496:4,599,138...4,605,653 		JBrowse link
G Npy1r neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chrNW_004936555:2,267,727...2,276,673
Ensembl chrNW_004936555:2,267,669...2,276,778 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (MGI:6712091|PMID:33942715) UniProt PMID:33942715 MGI:6712091 NCBI chrNW_004936489:13,901,066...14,000,652
Ensembl chrNW_004936489:13,901,754...13,999,983 		JBrowse link
G Scap SREBF chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,124,573...1,180,219
Ensembl chrNW_004936596:1,122,042...1,180,297 		JBrowse link
G Scp2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chrNW_004936522:8,004,503...8,110,995
Ensembl chrNW_004936522:8,005,442...8,110,889 		JBrowse link
G Sec14l2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chrNW_004936904:254,979...276,267
Ensembl chrNW_004936904:253,436...276,897 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16046411)
(PMID:9329978)		 Ensembl
MGI		 PMID:9329978 PMID:16046411 GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:12177166), (PMID:32322062)
(MGI:6712091|PMID:33942715), (MGI:6713934|PMID:34021134)		 UniProt PMID:12177166 PMID:32322062 PMID:33942715 PMID:34021134 MGI:6712091 MGI:6713934 NCBI chrNW_004936492:115,923...174,614
Ensembl chrNW_004936492:115,821...174,775 		JBrowse link
positive regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:15654758)
(MGI:3850619|PMID:15654758)		 BHF-UCL PMID:15654758 MGI:3850619 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Stard4 StAR related lipid transfer domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:5,865,840...5,877,591
Ensembl chrNW_004936531:5,866,021...5,877,597 		JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664 		JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8943280 RGD:2315982 NCBI chrNW_004936478:7,278,081...7,322,970
Ensembl chrNW_004936478:7,278,147...7,318,458 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,415,544...6,423,863
Ensembl chrNW_004936557:6,415,547...6,424,711 		JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004936903:146,108...162,410 JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816 		JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099 		JBrowse link
G Pth parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,081,569...5,084,030
Ensembl chrNW_004936528:5,083,596...5,084,030 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004936596:674,088...693,191
Ensembl chrNW_004936596:674,088...693,213 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:3,928,467...3,983,481
Ensembl chrNW_004936508:3,928,466...3,983,890 		JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004936519:865,756...872,466
Ensembl chrNW_004936519:866,208...872,393 		JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:2,468,020...2,501,344
Ensembl chrNW_004936498:2,500,128...2,501,114 		JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004936473:27,364,404...27,387,337
Ensembl chrNW_004936473:27,364,389...27,387,412 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098 		JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,525,461...5,539,351
Ensembl chrNW_004936578:5,525,601...5,539,472 		JBrowse link
regulation of aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:17122062) MGI PMID:17122062 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365 		JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16455790) Ensembl
MGI		 PMID:16455790 GO_REF:0000107 NCBI chrNW_004936493:10,509,118...10,549,144
Ensembl chrNW_004936493:10,509,118...10,549,144 		JBrowse link
G Aqp8 aquaporin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:9,430,872...9,438,182
Ensembl chrNW_004936501:9,430,775...9,436,813 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:80,583...116,027
Ensembl chrNW_004936636:80,564...116,694 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,193,679...1,210,059
Ensembl chrNW_004936710:1,193,411...1,210,739 		JBrowse link
G LOC101971285 7-dehydrocholesterol reductase ISO RGD PMID:10329655 RGD:632010 NCBI chrNW_004936794:1,432,379...1,468,966 JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:800,197...852,659
Ensembl chrNW_004936709:799,961...851,585 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chrNW_004936702:1,573,616...1,626,323
Ensembl chrNW_004936702:1,573,650...1,591,004 		JBrowse link
G Scap SREBF chaperone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054043) Ensembl
MGI
TreeGrafter		 PMID:16054043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:1,124,573...1,180,219
Ensembl chrNW_004936596:1,122,042...1,180,297 		JBrowse link
regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,620,763...1,678,561
Ensembl chrNW_004936500:1,620,641...1,678,607 		JBrowse link
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (MGI:3526480|PMID:15639194) BHF-UCL PMID:15639194 MGI:3526480 NCBI chrNW_004936845:66,674...96,248
Ensembl chrNW_004936845:66,241...96,249 		JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:514,883...520,223
Ensembl chrNW_004936595:514,534...520,223 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:24412220) ARUK-UCL PMID:24412220 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20663892) Ensembl
MGI		 PMID:20663892 GO_REF:0000107 NCBI chrNW_004936484:19,551,293...19,562,132
Ensembl chrNW_004936484:19,551,293...19,562,138 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:17526931 RGD:10400884 NCBI chrNW_004936498:4,514,212...4,544,523
Ensembl chrNW_004936498:4,514,184...4,544,527 		JBrowse link
G Dgkq diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,225,624...22,238,825
Ensembl chrNW_004936477:22,225,618...22,238,803 		JBrowse link
G Ephx2 epoxide hydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:350,357...392,919
Ensembl chrNW_004936675:350,342...392,551 		JBrowse link
G Gnb3 G protein subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:970,169...977,059
Ensembl chrNW_004936709:970,172...976,863 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Lmf1 lipase maturation factor 1 acts_upstream_of_or_within ISO (PMID:6857276) MGI PMID:6857276 NCBI chrNW_004936501:138,470...200,120
Ensembl chrNW_004936501:140,661...204,127 		JBrowse link
G LOC101965545 NADPH--cytochrome P450 reductase ISO RGD PMID:19264869 RGD:2316785 NCBI chrNW_004936543:2,275,981...2,327,931
Ensembl chrNW_004936543:2,274,059...2,328,008 		JBrowse link
G LOC101967471 tetratricopeptide repeat protein 39B-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936508:12,457,898...12,460,235 JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22837305) Ensembl
MGI		 PMID:22837305 GO_REF:0000107 NCBI chrNW_004936846:83,727...92,392
Ensembl chrNW_004936846:83,727...92,398 		JBrowse link
G Thrb thyroid hormone receptor beta ISO RGD PMID:17878314 RGD:2315101 NCBI chrNW_004936473:15,766,214...15,986,389
Ensembl chrNW_004936473:15,770,146...15,986,561 		JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936539:8,644,456...8,766,696
Ensembl chrNW_004936539:8,646,074...8,695,765 		JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,225,624...22,238,825
Ensembl chrNW_004936477:22,225,618...22,238,803 		JBrowse link
G H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,359,624...3,376,598
Ensembl chrNW_004936623:3,351,716...3,375,146 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10358022), (PMID:10402668) RGD
MGI
TreeGrafter
Ensembl		 PMID:10358022 PMID:10402668 PMID:10829036 GO_REF:0000107 GO_REF:0000118 RGD:631904 NCBI chrNW_004936520:3,467,003...3,489,754
Ensembl chrNW_004936520:3,467,003...3,490,997 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:12851412) MGI PMID:12851412 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936777:1,562,900...1,574,018
Ensembl chrNW_004936777:1,563,229...1,573,993 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936498:4,514,212...4,544,523
Ensembl chrNW_004936498:4,514,184...4,544,527 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:10,465,701...10,487,534
Ensembl chrNW_004936469:10,465,701...10,487,534 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936706:122,939...139,506
Ensembl chrNW_004936706:128,133...141,276 		JBrowse link
G LOC101961588 cytochrome P450 2D17 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chrNW_004936718:153,340...157,966 JBrowse link
G LOC101965278 retinol dehydrogenase 16 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7499345 GO_REF:0000118 RGD:1299624 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G LOC101966596 dehydrogenase/reductase SDR family member 7 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936495:4,341,261...4,358,279
Ensembl chrNW_004936495:4,339,700...4,358,547 		JBrowse link
G LOC101969148 cytochrome P450 1A1 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
G LOC101969421 cytochrome P450 1A2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:33,704,616...33,709,455
Ensembl chrNW_004936471:33,703,792...33,709,484 		JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177
Ensembl chrNW_004936520:3,760,755...3,775,873 		JBrowse link
G LOC101970041 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936496:2,919,611...2,937,274
Ensembl chrNW_004936496:2,919,522...2,937,274 		JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191 		JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013), (PMID:28701464) UniProt PMID:27059013 PMID:28701464 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G LOC101971467 pancreatic triacylglycerol lipase-like involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936486:6,486,381...6,498,578
Ensembl chrNW_004936486:6,486,557...6,498,626 		JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G LOC101976827 alcohol dehydrogenase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:3,651,829...3,677,841 JBrowse link
G Lrat lecithin retinol acyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18093970) RGD
MGI
TreeGrafter
InterPro
Ensembl		 PMID:2253789 PMID:8460936 PMID:9244401 PMID:14642897 PMID:18093970 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1599829 RGD:1599831 RGD:1599832 RGD:6484737 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Plb1 phospholipase B1 ISO RGD PMID:8117729 RGD:6903951 NCBI chrNW_004936493:4,112,632...4,210,882
Ensembl chrNW_004936493:4,112,858...4,232,492 		JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936644:1,091,794...1,113,621
Ensembl chrNW_004936644:1,093,388...1,112,557 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15193143)
(PMID:15193143), (PMID:15765518)		 RGD
MGI
Ensembl		 PMID:14642897 PMID:15193143 PMID:15765518 GO_REF:0000107 RGD:6484737 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18093970) Ensembl
MGI		 PMID:18093970 GO_REF:0000107 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,111,247...11,121,976
Ensembl chrNW_004936495:11,111,105...11,121,341 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936886:356,068...368,525
Ensembl chrNW_004936886:355,879...368,608 		JBrowse link
G Rdh14 retinol dehydrogenase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25533474) Ensembl
MGI		 PMID:25533474 GO_REF:0000107 Ensembl chrNW_004936493:12,542,144...12,546,977 JBrowse link
G Rdh8 retinol dehydrogenase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755727) TreeGrafter
MGI		 PMID:15755727 GO_REF:0000118 NCBI chrNW_004936659:439,541...445,645 JBrowse link
G Retsat retinol saturase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,826,813...1,837,048
Ensembl chrNW_004936712:1,826,923...1,841,141 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
GOC		 PMID:3603006 GO_REF:0000108 RGD:9585656 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
G Sdr9c7 short chain dehydrogenase/reductase family 9C member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,170,855...1,190,797
Ensembl chrNW_004936646:1,171,736...1,182,929 		JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671 		JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6626150), (PMID:722274) Ensembl
MGI		 PMID:722274 PMID:6626150 GO_REF:0000107 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967158 serine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9363775) Ensembl
MGI		 PMID:9363775 GO_REF:0000107 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19416652) Ensembl
MGI		 PMID:19416652 GO_REF:0000107 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11937514) Ensembl
MGI
TreeGrafter		 PMID:11937514 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936604:3,821,672...3,839,975
Ensembl chrNW_004936604:3,817,886...3,839,986 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:26510981) ARUK-UCL
Ensembl		 PMID:26510981 GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
G Agk acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936592:5,454,860...5,531,285
Ensembl chrNW_004936592:5,457,582...5,531,000 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G LOC101967158 serine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16216550) Ensembl
MGI
TreeGrafter		 PMID:16216550 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16216550) Ensembl
MGI
TreeGrafter		 PMID:16216550 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:8,717,821...8,738,923
Ensembl chrNW_004936494:8,716,829...8,739,066 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420 		JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:16229686), (PMID:17475390), (PMID:26190575)
(PMID:10781606), (PMID:15946935)		 UniProt PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO (PMID:15655246) UniProt PMID:15655246 NCBI chrNW_004936598:42,751...56,261 JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,265,304...12,357,747
Ensembl chrNW_004936480:12,265,246...12,359,450 		JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:14,422...20,467
Ensembl chrNW_004936588:14,399...20,514 		JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,992,333...5,074,295
Ensembl chrNW_004936522:4,992,322...5,074,313 		JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11756451) Ensembl
MGI
TreeGrafter		 PMID:11756451 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936495:7,500,991...7,528,520
Ensembl chrNW_004936495:7,502,859...7,528,515 		JBrowse link
G Sgpp2 sphingosine-1-phosphate phosphatase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:4,405,804...4,518,637
Ensembl chrNW_004936569:4,406,253...4,518,655 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16093248) Ensembl
MGI		 PMID:16093248 GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936697:232,048...275,420 JBrowse link
G LOC101968888 sepiapterin reductase-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936491:16,715,851...16,744,284 JBrowse link
G LOC101973044 GTP cyclohydrolase 1-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004937155:57,736...58,850 JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936521:7,843,945...7,847,827
Ensembl chrNW_004936521:7,845,870...7,848,426 		JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936597:2,113,428...2,161,329
Ensembl chrNW_004936597:2,119,136...2,161,379 		JBrowse link
G Pts 6-pyruvoyltetrahydropterin synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9894812) UniProt
MGI
InterPro
Ensembl		 PMID:9894812 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936612:2,247,825...2,255,277
Ensembl chrNW_004936612:2,246,878...2,253,675 		JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt		 PMID:660556 PMID:9235988 GO_REF:0000043 GO_REF:0000118 RGD:4139903 RGD:5128582 NCBI chrNW_004936477:10,687,328...10,708,015
Ensembl chrNW_004936477:10,687,276...10,708,031 		JBrowse link
G Spr sepiapterin reductase involved_in ISO
IEA		 RGD
TreeGrafter
InterPro		 PMID:2179471 GO_REF:0000002 GO_REF:0000118 RGD:1600056 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link
tetrahydrobiopterin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spr sepiapterin reductase acts_upstream_of_or_within ISO (PMID:16532389) MGI PMID:16532389 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link
thiamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp3 acid phosphatase 3 involved_in IEA
ISS		 Ensembl
CAFA		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936529:5,661,772...5,723,108
Ensembl chrNW_004936529:5,661,702...5,725,363 		JBrowse link
G Thtpa thiamine triphosphatase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936722:858,119...904,630
Ensembl chrNW_004936722:855,975...863,098 		JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567383) Ensembl
MGI
InterPro		 PMID:10567383 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936527:1,450,918...1,786,431
Ensembl chrNW_004936527:1,450,430...1,786,521 		JBrowse link
vitamin D3 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:28798354) MGI PMID:28798354 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24259513) Ensembl
MGI		 PMID:24259513 GO_REF:0000107 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:24259513) MGI PMID:24259513 NCBI chrNW_004936597:1,388,394...1,397,731
Ensembl chrNW_004936597:1,385,624...1,397,758 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    metabolic process 9527
      small molecule metabolic process 1624
        alcohol metabolic process 321
          3-(3-hydroxy)phenylpropionate metabolic process + 0
          3-hydroxybenzyl alcohol metabolic process 0
          alcohol biosynthetic process + 140
          alcohol catabolic process + 24
          cyclopentanol metabolic process + 0
          ethanolamine-containing compound metabolic process + 10
          fatty alcohol metabolic process + 2
          fonsecin metabolic process + 0
          monensin A metabolic process + 0
          polyol metabolic process + 108
          polyprenol metabolic process + 15
          prenol metabolic process + 0
          primary alcohol metabolic process + 74
          secondary alcohol metabolic process + 140
          tertiary alcohol metabolic process + 19
Path 2
Term Annotations click to browse term
  biological_process 15871
    metabolic process 9527
      organic substance metabolic process 9091
        organic hydroxy compound metabolic process 512
          alcohol metabolic process 321
            3-(3-hydroxy)phenylpropionate metabolic process + 0
            3-hydroxybenzyl alcohol metabolic process 0
            alcohol biosynthetic process + 140
            alcohol catabolic process + 24
            cyclopentanol metabolic process + 0
            ethanolamine-containing compound metabolic process + 10
            fatty alcohol metabolic process + 2
            fonsecin metabolic process + 0
            monensin A metabolic process + 0
            polyol metabolic process + 108
            polyprenol metabolic process + 15
            prenol metabolic process + 0
            primary alcohol metabolic process + 74
            secondary alcohol metabolic process + 140
            tertiary alcohol metabolic process + 19
paths to the root