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ONTOLOGY REPORT - ANNOTATIONS

Term:glycogen metabolic process
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Accession:GO:0005977 term browser browse the term
Definition:The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages.
Synonyms:exact_synonym: glycogen metabolism
 xref: Reactome:R-HSA-8982491 "Glycogen metabolism"


show annotations for term's descendants           Sort by:
glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11785984) Ensembl
MGI		 PMID:11785984 GO_REF:0000107 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,177,377...118,269,101 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (PMID:12783884) MGI PMID:12783884
G COMT catechol-O-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30179860) Ensembl
MGI		 PMID:30179860 GO_REF:0000107 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,738...51,403,998 		JBrowse link
G FBXO30 F-box protein 30 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28973665)
(PMID:23663739), (PMID:24914213), (PMID:25416783)
(PMID:21552327)		 Ensembl
MGI		 PMID:21552327 PMID:23663739 PMID:24914213 PMID:25416783 PMID:28973665 GO_REF:0000107 NCBI chr 1:19,806,363...19,893,350
Ensembl chr 1:19,806,765...19,893,339 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8640227) Ensembl
MGI		 PMID:8640227 GO_REF:0000107 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857 		JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11590121), (PMID:15169761), (PMID:9668092)
(PMID:10547605), (PMID:12115977), (PMID:15207257), (PMID:9384603)		 Ensembl
MGI		 PMID:9384603 PMID:9668092 PMID:10547605 PMID:11590121 PMID:12115977 More... GO_REF:0000107 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,315,809...2,341,327 		JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17937387) Ensembl
MGI		 PMID:17937387 GO_REF:0000107 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:49,690,319...49,700,735
Ensembl chr 6:49,690,370...49,701,189 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569 		JBrowse link
G GYS1 glycogen synthase 1 ISO RGD PMID:6244274 PMID:10572943 RGD:1642811 RGD:2304186 NCBI chr 6:54,234,600...54,250,211
Ensembl chr 6:54,233,050...54,250,261 		JBrowse link
G GYS2 glycogen synthase 2 ISO RGD PMID:1733780 PMID:6096366 RGD:2304113 RGD:2304117 NCBI chr 5:51,862,952...51,915,153
Ensembl chr 5:51,862,863...51,917,757 		JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10205167) Ensembl
MGI		 PMID:10205167 GO_REF:0000107 NCBI chr16:35,101,304...35,151,832
Ensembl chr16:35,101,306...35,192,220 		JBrowse link
G LEPR leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28973665) Ensembl
MGI		 PMID:28973665 GO_REF:0000107 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,801,954...146,895,995 		JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24914213), (PMID:25416783)
(PMID:23663739)		 MGI PMID:23663739 PMID:24914213 PMID:25416783 NCBI chr 7:13,816,243...13,817,644
Ensembl chr 7:13,816,246...13,817,644 		JBrowse link
G PCDH12 protocadherin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477666) Ensembl
MGI		 PMID:18477666 GO_REF:0000107 NCBI chr 2:143,550,844...143,565,028
Ensembl chr 2:143,550,849...143,565,033 		JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (PMID:30179860) MGI PMID:30179860 NCBI chr 7:98,149,510...98,162,784
Ensembl chr 7:98,148,994...98,162,741 		JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:58,456,097...58,583,216
Ensembl chr  X:58,455,939...58,583,216 		JBrowse link
G PHKA2 phosphorylase kinase regulatory subunit alpha 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:15,279,398...15,365,731
Ensembl chr  X:15,283,120...15,365,565 		JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 6:36,994,424...37,193,631
Ensembl chr 6:36,991,274...37,193,593 		JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:3953807 PMID:6281247 GO_REF:0000002 GO_REF:0000043 RGD:2304176 RGD:2305955 NCBI chr 3:16,822,042...16,831,054
Ensembl chr 3:16,822,043...16,834,329 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
InterPro
UniProt		 PMID:1370475 PMID:6281247 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 RGD:2304176 RGD:727546 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891 		JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499 		JBrowse link
G PPP1R1A protein phosphatase 1 regulatory inhibitor subunit 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:19,753,850...19,763,281
Ensembl chr 5:19,753,847...19,763,269 		JBrowse link
G PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:132,460,186...132,489,490 JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA UniProt GO_REF:0000043 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9045612)
(PMID:21552327)		 UniProt
MGI
Ensembl		 PMID:9045612 PMID:21552327 GO_REF:0000043 GO_REF:0000107 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,405...103,278,762 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IEA UniProt GO_REF:0000043 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113 		JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:5,475,077...5,744,761
Ensembl chr18:5,475,077...5,744,657 		JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IEA		 RGD
UniProt		 PMID:1554349 GO_REF:0000043 RGD:2304136 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,691 		JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:1554349 PMID:1733780 PMID:2803260 PMID:6096366 PMID:8550381 More... GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1601233 RGD:2304113 RGD:2304115 RGD:2304117 RGD:2304119 RGD:2304136 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979 		JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in ISO
IEA		 RGD
UniProt		 PMID:6244274 PMID:8550381 PMID:10572943 GO_REF:0000043 RGD:1642811 RGD:2304119 RGD:2304186 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,409,116...7,421,254 		JBrowse link
G SLC37A4 solute carrier family 37 member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12925567), (PMID:16891306) Ensembl
MGI		 PMID:12925567 PMID:16891306 GO_REF:0000107 NCBI chr 9:46,247,278...46,254,068
Ensembl chr 9:46,247,282...46,254,031 		JBrowse link
G STK40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23293024) Ensembl
MGI		 PMID:23293024 GO_REF:0000107 NCBI chr 6:92,441,231...92,484,363
Ensembl chr 6:92,441,233...92,484,336 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:23260145) MGI PMID:23260145 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,412...123,546,417 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:77,975,450...78,032,471
Ensembl chr 3:77,975,441...78,031,703 		JBrowse link
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,381...137,595,108 		JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,177,377...118,269,101 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA UniProt GO_REF:0000043
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:24142699) Ensembl
MGI		 PMID:24142699 GO_REF:0000107 NCBI chr13:21,877,863...21,886,210
Ensembl chr13:21,878,146...21,879,972 		JBrowse link
G FBXO30 F-box protein 30 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28536304) Ensembl
MGI		 PMID:28536304 GO_REF:0000107 NCBI chr 1:19,806,363...19,893,350
Ensembl chr 1:19,806,765...19,893,339 		JBrowse link
G GBE1 1,4-alpha-glucan branching enzyme 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl
InterPro		 PMID:6449198 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1642743 NCBI chr13:173,634,401...173,909,646
Ensembl chr13:173,634,454...173,914,756 		JBrowse link
G GYG1 glycogenin 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
Ensembl		 PMID:8224611 PMID:10710493 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:2303736 RGD:2304070 NCBI chr13:89,221,086...89,259,569
Ensembl chr13:89,221,157...89,259,792 		JBrowse link
G GYG2 glycogenin 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:52,310...89,412
Ensembl chr  X:52,171...89,409 		JBrowse link
G GYS1 glycogen synthase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:15282316) RGD
GO_Central
MGI
Ensembl
UniProt
InterPro		 PMID:6449198 PMID:7671134 PMID:15282316 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1642743 RGD:2303748 NCBI chr 6:54,234,600...54,250,211
Ensembl chr 6:54,233,050...54,250,261 		JBrowse link
G GYS2 glycogen synthase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl
UniProt
InterPro		 PMID:114169 PMID:6449198 PMID:15138155 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582633 RGD:1642743 RGD:2304128 NCBI chr 5:51,862,952...51,915,153
Ensembl chr 5:51,862,863...51,917,757 		JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:28536304)
(PMID:31042462)
(PMID:20538597)		 MGI PMID:20538597 PMID:28536304 PMID:31042462 NCBI chr 7:13,816,243...13,817,644
Ensembl chr 7:13,816,246...13,817,644 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643 		JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (PMID:20159955) UniProt PMID:20159955 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070 		JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,307,628...29,343,012
Ensembl chr 8:29,307,685...29,342,861 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10683377) UniProt
MGI
Ensembl		 PMID:10683377 GO_REF:0000104 GO_REF:0000107 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,405...103,278,762 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21471512) Ensembl
MGI		 PMID:21471512 GO_REF:0000107 NCBI chr 7:3,049,153...3,059,840
Ensembl chr 7:3,051,149...3,052,210 		JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17438133) Ensembl
MGI		 PMID:17438133 GO_REF:0000107 NCBI chr 5:22,000,335...22,022,830
Ensembl chr 5:22,000,341...22,021,660 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 3:77,975,450...78,032,471
Ensembl chr 3:77,975,441...78,031,703 		JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of ISO (PMID:14581480) MGI PMID:14581480 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034 		JBrowse link
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,330...124,401,739 		JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl
InterPro		 PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,177,377...118,269,101 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10625614) Ensembl
MGI		 PMID:10625614 GO_REF:0000107 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857 		JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:11785984)
(PMID:11328962)
(PMID:10838256)		 RGD
GO_Central
MGI
Ensembl		 PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 GO_REF:0000033 GO_REF:0000107 RGD:1599504 RGD:1599506 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,315,809...2,341,327 		JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of ISO (PMID:10391216) MGI PMID:10391216 NCBI chr11:7,195,556...7,321,071 JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19696889) Ensembl
MGI		 PMID:19696889 GO_REF:0000107 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,476,123...78,526,997 		JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,307,628...29,343,012
Ensembl chr 8:29,307,685...29,342,861 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618 		JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:10634496 PMID:11071367 PMID:16226229 GO_REF:0000033 GO_REF:0000107 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,691 		JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IEA
IBA		 RGD
Ensembl
GO_Central		 PMID:114169 PMID:6449198 PMID:15152027 GO_REF:0000033 GO_REF:0000107 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979 		JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:17689562)
(PMID:15282316), (PMID:17689562)		 RGD
GO_Central
MGI
Ensembl		 PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 More... GO_REF:0000033 GO_REF:0000107 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,409,116...7,421,254 		JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chr 8:71,982,987...71,987,880 JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:119,948,443...119,965,702
Ensembl chr 2:119,941,997...119,965,696 		JBrowse link
G ATG2A autophagy related 2A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:7,261,819...7,282,614
Ensembl chr 2:7,262,031...7,282,347 		JBrowse link
G ATG2B autophagy related 2B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:117,506,298...117,586,651
Ensembl chr 7:117,506,302...117,586,545 		JBrowse link
G ATG3 autophagy related 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:147,279,110...147,309,597
Ensembl chr13:147,279,437...147,309,590 		JBrowse link
G GAA alpha glucosidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,315,809...2,341,327 		JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,758,127...61,767,427
Ensembl chr 5:61,758,130...61,767,601 		JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,324...77,649,548 		JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central
MGI		 PMID:20810658 NCBI chr 8:71,982,987...71,987,880 JBrowse link
G WDR45 WD repeat domain 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:43,150,691...43,155,981
Ensembl chr  X:43,147,477...43,156,234 		JBrowse link
G WDR45B WD repeat domain 45B involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:522,762...547,333
Ensembl chr12:522,829...549,156 		JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:11,715,332...11,752,009
Ensembl chr12:11,715,318...11,752,021 		JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:3,800,170...3,830,973
Ensembl chr 3:3,800,186...3,834,413 		JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:73,028,804...73,085,319 		JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr 9:136,580,363...136,742,552
Ensembl chr 9:136,580,362...136,741,756 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,718,491...47,738,475 		JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,104 		JBrowse link
G MIR15B microRNA mir-15b acts_upstream_of ISO (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr13:100,083,172...100,083,269
Ensembl chr13:100,083,172...100,083,269 		JBrowse link
G MIR195 microRNA mir-195 acts_upstream_of ISO (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr12:52,422,039...52,422,118
Ensembl chr12:52,422,039...52,422,118 		JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:139,887,439...139,917,887
Ensembl chr15:139,890,178...139,917,069 		JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:139,881,217...139,887,505
Ensembl chr15:139,881,222...139,887,032 		JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15857891) MGI
Ensembl		 PMID:15857891 GO_REF:0000107 NCBI chr15:120,859,486...120,866,308
Ensembl chr15:120,855,201...120,866,332 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034 		JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,795...48,587,919 		JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) MGI PMID:15231994 NCBI chr16:63,167,087...63,185,938
Ensembl chr16:63,167,184...63,189,815 		JBrowse link
G CD36 CD36 molecule ISO RGD PMID:14640889 RGD:1600636 NCBI chr 9:99,685,748...99,782,296
Ensembl chr 9:99,605,181...99,782,105 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,047,614...32,064,231
Ensembl chr 5:32,047,643...32,064,222 		JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:24142699) Ensembl
GO_Central
MGI		 PMID:24142699 GO_REF:0000033 GO_REF:0000107 NCBI chr13:21,877,863...21,886,210
Ensembl chr13:21,878,146...21,879,972 		JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529
(PMID:24481529)		 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 7:99,511,135...99,699,478
Ensembl chr 7:99,514,168...99,699,011 		JBrowse link
G GCK glucokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,979,167...51,024,500
Ensembl chr18:50,979,167...51,029,844 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033 		JBrowse link
G IGF2 insulin like growth factor 2 acts_upstream_of ISO (PMID:20032056) BHF-UCL PMID:20032056 NCBI chr 2:1,469,183...1,496,417 JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841 		JBrowse link
G INSR insulin receptor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20032056) Ensembl
BHF-UCL		 PMID:20032056 GO_REF:0000107 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,104 		JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,245,846...128,307,321
Ensembl chr15:128,245,846...128,307,284 		JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,626,158...76,654,639
Ensembl chr11:76,626,179...76,653,881 		JBrowse link
G MYL7 myosin light chain 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,026,436...51,028,917
Ensembl chr18:50,979,167...51,029,844 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,720...75,780,649 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21471512) Ensembl
MGI		 PMID:21471512 GO_REF:0000107 NCBI chr 7:3,049,153...3,059,840
Ensembl chr 7:3,051,149...3,052,210 		JBrowse link
G PTH parathyroid hormone involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415 		JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (PMID:11001060) BHF-UCL PMID:11001060 NCBI chr14:106,895,764...107,137,469
Ensembl chr14:106,895,765...107,137,561 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 ISO RGD PMID:22998876 RGD:329412477 NCBI chr 4:83,103,768...83,205,015
Ensembl chr 4:83,098,290...83,205,454 		JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034 		JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (PMID:10391216) MGI PMID:10391216 NCBI chr11:7,195,556...7,321,071 JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:58,456,097...58,583,216
Ensembl chr  X:58,455,939...58,583,216 		JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) FlyBase PMID:36077341 NCBI chr 6:36,994,424...37,193,631
Ensembl chr 6:36,991,274...37,193,593 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:8940145) BHF-UCL PMID:8940145
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,718,491...47,738,475 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891 		JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:31,997,667...32,039,949
Ensembl chr18:31,997,713...32,039,852 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IBA		 RGD
GO_Central		 PMID:7720853 PMID:11716774 GO_REF:0000033 RGD:2304267 RGD:2306167 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in ISO
IBA		 RGD
GO_Central		 PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,405...103,278,762 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in ISO
IBA		 RGD
GO_Central		 PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO
IBA		 RGD
GO_Central		 PMID:15752363 GO_REF:0000033 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,720...75,780,649 		JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:21668450) MGI
GO_Central
Ensembl		 PMID:21668450 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:43,328,199...43,344,503
Ensembl chr  X:43,328,274...43,344,013 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:3,049,153...3,059,840
Ensembl chr 7:3,051,149...3,052,210 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA		 RGD
InterPro		 PMID:7720853 PMID:11716774 GO_REF:0000002 RGD:2304267 RGD:2306167 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,405...103,278,762 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,720...75,780,649 		JBrowse link
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCGR glucagon receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,149,589...1,157,234
Ensembl chr12:1,146,069...1,157,234 		JBrowse link
G KHK ketohexokinase acts_upstream_of_or_within ISO (PMID:22371574) MGI PMID:22371574 NCBI chr 3:112,021,163...112,031,615
Ensembl chr 3:112,021,108...112,031,620 		JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19884348) Ensembl
MGI		 PMID:19884348 GO_REF:0000107 NCBI chr 2:2,057,679...2,058,675
Ensembl chr 2:2,057,681...2,058,694 		JBrowse link
G POMC proopiomelanocortin acts_upstream_of_or_within ISO (PMID:21184805) MGI PMID:21184805 NCBI chr 3:113,661,712...113,668,558
Ensembl chr 3:113,661,004...113,670,418 		JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in ISO (PMID:30704899) UniProt PMID:30704899 NCBI chr11:20,995,439...21,036,429
Ensembl chr11:20,995,688...21,036,014 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18933
    cellular process 18475
      metabolic process 11716
        generation of precursor metabolites and energy 450
          energy derivation by oxidation of organic compounds 332
            energy reserve metabolic process 108
              glycogen metabolic process 96
                glycogen biosynthetic process + 51
                glycogen catabolic process + 33
                negative regulation of glycogen metabolic process + 14
                positive regulation of glycogen metabolic process + 27
                regulation of glycogen metabolic process + 48
Path 2
Term Annotations click to browse term
  biological_process 18933
    cellular process 18475
      metabolic process 11716
        primary metabolic process 10385
          carbohydrate metabolic process 587
            polysaccharide metabolic process 126
              glucan metabolic process 99
                glycogen metabolic process 96
                  glycogen biosynthetic process + 51
                  glycogen catabolic process + 33
                  negative regulation of glycogen metabolic process + 14
                  positive regulation of glycogen metabolic process + 27
                  regulation of glycogen metabolic process + 48
paths to the root