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ONTOLOGY REPORT - ANNOTATIONS


Term:glycogen metabolic process
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Accession:GO:0005977 term browser browse the term
Definition:The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages.
Synonyms:exact_synonym: glycogen metabolism
 xref: Reactome:R-HSA-8982491 "Glycogen metabolism"



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glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11785984) Ensembl
MGI
PMID:11785984 GO_REF:0000107 NCBI chr 1:99,849,258...99,924,023
Ensembl chr 1:99,850,361...99,924,023
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12783884) Ensembl
MGI
PMID:12783884 GO_REF:0000107 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,759
JBrowse link
G COMT catechol-O-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30179860) Ensembl
MGI
PMID:30179860 GO_REF:0000107 NCBI chr22:19,941,772...19,969,975
Ensembl chr22:19,941,371...19,969,975
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
NAS
ISO
IMP
IEA
(PMID:9931343)
(PMID:21552327)
(PMID:23663739), (PMID:24914213), (PMID:25416783)
(PMID:28973665)
(PMID:25538239)
UniProt
MGI
Ensembl
PMID:9931343 PMID:21552327 PMID:23663739 PMID:24914213 PMID:25416783 More... GO_REF:0000043 GO_REF:0000107 NCBI chr 6:145,383,353...145,736,023
Ensembl chr 6:145,382,535...145,736,023
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within
TAS
ISO
IEA
(PMID:8211187)
(PMID:8640227)
PINC
MGI
Ensembl
PMID:8211187 PMID:8640227 GO_REF:0000107 NCBI chr17:42,900,799...42,914,438
Ensembl chr17:42,900,797...42,914,438
JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10547605), (PMID:12115977), (PMID:15207257), (PMID:9384603)
(PMID:11590121), (PMID:15169761), (PMID:9668092)
Ensembl
MGI
PMID:9384603 PMID:9668092 PMID:10547605 PMID:11590121 PMID:12115977 More... GO_REF:0000107 NCBI chr17:80,101,581...80,119,881
Ensembl chr17:80,101,533...80,119,881
JBrowse link
G GBE1 1,4-alpha-glucan branching enzyme 1 involved_in TAS (PMID:8613547) PINC PMID:8613547 NCBI chr 3:81,489,703...81,761,645
Ensembl chr 3:81,489,703...81,761,645
JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17937387) Ensembl
MGI
PMID:17937387 GO_REF:0000107 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr19:42,230,190...42,242,602
Ensembl chr19:42,226,225...42,242,625
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA
IDA
(PMID:8638126) UniProt
BHF-UCL
PMID:8638126 GO_REF:0000043 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
G GYS1 glycogen synthase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:6244274 PMID:10572943 GO_REF:0000107 RGD:1642811 RGD:2304186 NCBI chr19:48,968,130...48,993,309
Ensembl chr19:48,968,130...48,993,310
JBrowse link
G GYS2 glycogen synthase 2 ISO RGD PMID:1733780 PMID:6096366 RGD:2304113 RGD:2304117 NCBI chr12:21,532,577...21,604,847
Ensembl chr12:21,536,107...21,604,847
JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10205167) Ensembl
MGI
PMID:10205167 GO_REF:0000107 NCBI chr 5:55,935,095...55,994,963
Ensembl chr 5:55,935,095...55,995,022
JBrowse link
G LEPR leptin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28973665) Ensembl
MGI
PMID:28973665 GO_REF:0000107 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559
JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24914213), (PMID:25416783)
(PMID:23663739)
Ensembl
MGI
PMID:23663739 PMID:24914213 PMID:25416783 GO_REF:0000107 NCBI chr 6:18,120,440...18,122,677
Ensembl chr 6:18,120,440...18,122,677
JBrowse link
G PCDH12 protocadherin 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18477666) Ensembl
MGI
PMID:18477666 GO_REF:0000107 NCBI chr 5:141,943,581...141,958,202
Ensembl chr 5:141,943,581...141,969,741
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (PMID:30179860) MGI PMID:30179860 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626
JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA
TAS
(PMID:7874115) UniProt
PINC
InterPro
PMID:7874115 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:72,578,814...72,714,306
Ensembl chr  X:72,578,814...72,714,319
JBrowse link
G PHKA2 phosphorylase kinase regulatory subunit alpha 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:18,892,298...18,984,114
Ensembl chr  X:18,892,298...18,984,114
JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in IEA
TAS
(PMID:9402963) UniProt
PINC
InterPro
PMID:9402963 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr16:47,461,299...47,701,523
Ensembl chr16:47,461,123...47,701,523
JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 involved_in ISO
IBA
IEA
RGD
GO_Central
InterPro
UniProt
Ensembl
PMID:3953807 PMID:6281247 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 RGD:2304176 RGD:2305955 NCBI chr 7:56,080,295...56,092,952
Ensembl chr 7:56,080,283...56,092,996
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO
IBA
IEA
TAS
(PMID:8896567) RGD
GO_Central
InterPro
UniProt
PINC
Ensembl
PMID:1370475 PMID:6281247 PMID:8896567 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 RGD:2304176 RGD:727546 NCBI chr16:30,748,425...30,761,176
Ensembl chr16:30,748,293...30,761,176
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G PPP1R1A protein phosphatase 1 regulatory inhibitor subunit 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr12:54,579,246...54,588,659
Ensembl chr12:54,575,387...54,588,659
JBrowse link
G PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:195,514,428...195,543,325
Ensembl chr 3:195,514,428...195,543,386
JBrowse link
G PPP1R2B PPP1R2 family member B involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:156,850,295...156,852,528
Ensembl chr 5:156,850,295...156,852,528
JBrowse link
G PPP1R2P1 protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,876,478...32,880,074
Ensembl chr 6:32,879,216...32,879,833
JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:113,876,777...113,919,009
Ensembl chr 7:113,876,777...114,075,920
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:9,136,255...9,151,539
Ensembl chr 8:9,136,255...9,151,574
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:21552327)
(PMID:9045612)
Ensembl
MGI
UniProt
PMID:9045612 PMID:21552327 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr10:91,628,442...91,633,071
Ensembl chr10:91,628,442...91,633,071
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IEA UniProt GO_REF:0000043 NCBI chr20:59,936,663...59,940,305
Ensembl chr20:59,936,663...59,940,305
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in IEA UniProt GO_REF:0000043 NCBI chr14:23,295,652...23,302,859
Ensembl chr14:23,295,652...23,302,859
JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IMP (PMID:11827995), (PMID:15877279) BHF-UCL PMID:11827995 PMID:15877279 NCBI chr 7:151,556,127...151,877,115
Ensembl chr 7:151,556,124...151,877,214
JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IEA
RGD
UniProt
PMID:1554349 GO_REF:0000043 RGD:2304136 NCBI chr20:25,248,085...25,298,012
Ensembl chr20:25,248,085...25,298,012
JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IEA
IMP
(PMID:10980448), (PMID:17705025) RGD
UniProt
Ensembl
PMID:1554349 PMID:1733780 PMID:2803260 PMID:6096366 PMID:8550381 More... GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1601233 RGD:2304113 RGD:2304115 RGD:2304117 RGD:2304119 RGD:2304136 NCBI chr14:50,905,217...50,944,483
Ensembl chr14:50,857,891...50,944,483
JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in ISO
IEA
TAS
(PMID:9633816) RGD
UniProt
PINC
PMID:6244274 PMID:8550381 PMID:9633816 PMID:10572943 GO_REF:0000043 RGD:1642811 RGD:2304119 RGD:2304186 NCBI chr11:64,746,389...64,760,715
Ensembl chr11:64,746,389...64,759,974
JBrowse link
G SLC37A4 solute carrier family 37 member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12925567), (PMID:16891306) Ensembl
MGI
PMID:12925567 PMID:16891306 GO_REF:0000107 NCBI chr11:119,024,112...119,030,877
Ensembl chr11:119,023,751...119,030,906
JBrowse link
G STBD1 starch binding domain 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:76,306,733...76,311,130
Ensembl chr 4:76,306,733...76,311,130
JBrowse link
G STK40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23293024) Ensembl
MGI
PMID:23293024 GO_REF:0000107 NCBI chr 1:36,339,628...36,385,924
Ensembl chr 1:36,339,624...36,385,924
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:23260145) MGI PMID:23260145 NCBI chr10:112,950,247...113,167,678
Ensembl chr10:112,950,247...113,167,678
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:63,840,969...63,891,560
Ensembl chr 2:63,840,952...63,891,562
JBrowse link
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:75,724,709...75,763,679
Ensembl chr 1:75,724,431...75,787,575
JBrowse link
G AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 1:99,849,258...99,924,023
Ensembl chr 1:99,850,361...99,924,023
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,759
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:40,230,317...40,285,345
Ensembl chr19:40,230,317...40,285,536
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
IEA
ISO
TAS
(PMID:28536304) Ensembl
MGI
Reactome
PMID:28536304 GO_REF:0000107 Reactome:R-HSA-3322077 NCBI chr 6:145,383,353...145,736,023
Ensembl chr 6:145,382,535...145,736,023
JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:24142699) Ensembl
MGI
PMID:24142699 GO_REF:0000107 NCBI chr 3:36,985,043...36,993,131
Ensembl chr 3:36,985,043...36,993,131
JBrowse link
G GBE1 1,4-alpha-glucan branching enzyme 1 involved_in ISO
IBA
IEA
IDA
TAS
(PMID:26199317) RGD
GO_Central
Ensembl
InterPro
UniProt
Reactome
PMID:6449198 PMID:26199317 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1642743 Reactome:R-HSA-3322077 NCBI chr 3:81,489,703...81,761,645
Ensembl chr 3:81,489,703...81,761,645
JBrowse link
G GCK glucokinase ISO RGD PMID:17028192 RGD:1581879 NCBI chr 7:44,143,213...44,189,439
Ensembl chr 7:44,143,213...44,198,170
JBrowse link
G GYG1 glycogenin 1 involved_in ISO
IBA
IEA
TAS
IMP
(PMID:22160680) RGD
GO_Central
UniProt
Reactome
PMID:8224611 PMID:10710493 PMID:22160680 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 RGD:2303736 RGD:2304070 Reactome:R-HSA-3322077 NCBI chr 3:148,991,540...149,031,775
Ensembl chr 3:148,991,408...149,031,775
JBrowse link
G GYG2 glycogenin 2 involved_in IEA
TAS
IDA
(PMID:9857012) UniProt
Reactome
PMID:9857012 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 Reactome:R-HSA-3322077 NCBI chr  X:2,828,930...2,882,818
Ensembl chr  X:2,828,822...2,882,818
JBrowse link
G GYS1 glycogen synthase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
TAS
(PMID:15282316) RGD
GO_Central
MGI
Ensembl
InterPro
UniProt
Reactome
PMID:6449198 PMID:7671134 PMID:15282316 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1642743 RGD:2303748 Reactome:R-HSA-3322077 NCBI chr19:48,968,130...48,993,309
Ensembl chr19:48,968,130...48,993,310
JBrowse link
G GYS2 glycogen synthase 2 involved_in ISO
IBA
IMP
IEA
ISS
TAS
IDA
(PMID:9691087)
(PMID:1731614)
RGD
GO_Central
UniProt
Ensembl
Reactome
InterPro
PMID:114169 PMID:1731614 PMID:6449198 PMID:9691087 PMID:15138155 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582633 RGD:1642743 RGD:2304128 Reactome:R-HSA-3322077 NCBI chr12:21,532,577...21,604,847
Ensembl chr12:21,536,107...21,604,847
JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
TAS
ISO
IEA
(PMID:28536304) Reactome
MGI
Ensembl
PMID:28536304 GO_REF:0000107 Reactome:R-HSA-3322077 NCBI chr 6:18,120,440...18,122,677
Ensembl chr 6:18,120,440...18,122,677
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,826,686...37,862,937
Ensembl chr 4:37,826,660...37,862,937
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:10683377) Ensembl
MGI
UniProt
PMID:10683377 GO_REF:0000024 GO_REF:0000107 NCBI chr10:91,628,442...91,633,071
Ensembl chr10:91,628,442...91,633,071
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in
acts_upstream_of
IEA
ISO
(PMID:21471512) Ensembl
MGI
PMID:21471512 GO_REF:0000107 NCBI chr 6:5,085,341...5,089,487
Ensembl chr 6:5,085,341...5,089,487
JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17438133) Ensembl
MGI
PMID:17438133 GO_REF:0000107 NCBI chr12:56,663,349...56,688,284
Ensembl chr12:56,663,341...56,688,408
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IMP
IEA
(PMID:31820119) UniProt
Ensembl
PMID:31820119 GO_REF:0000041 GO_REF:0000107 NCBI chr 2:63,840,969...63,891,560
Ensembl chr 2:63,840,952...63,891,562
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 5:159,865,086...159,989,205
Ensembl chr 5:159,865,080...159,973,012
JBrowse link
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr10:114,043,866...114,046,904
Ensembl chr10:114,043,866...114,046,904
JBrowse link
G AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase involved_in ISO
IEA
IBA
TAS
RGD
Ensembl
GO_Central
Reactome
InterPro
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 Reactome:R-HSA-70221 NCBI chr 1:99,849,258...99,924,023
Ensembl chr 1:99,850,361...99,924,023
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10625614) Ensembl
MGI
PMID:10625614 GO_REF:0000107 NCBI chr17:42,900,799...42,914,438
Ensembl chr17:42,900,797...42,914,438
JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within
ISO
IBA
IDA
IEA
TAS
(PMID:10838256)
(PMID:11785984)
(PMID:11328962)
(PMID:29061980), (PMID:9505277)
RGD
GO_Central
MGI
BHF-UCL
Ensembl
Reactome
PMID:2193931 PMID:8710802 PMID:9505277 PMID:10838256 PMID:11328962 More... GO_REF:0000033 GO_REF:0000107 RGD:1599504 RGD:1599506 Reactome:R-HSA-70221 NCBI chr17:80,101,581...80,119,881
Ensembl chr17:80,101,533...80,119,881
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of ISO (PMID:10391216) MGI PMID:10391216 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19696889) Ensembl
MGI
PMID:19696889 GO_REF:0000107 NCBI chr12:48,105,353...48,146,404
Ensembl chr12:48,105,139...48,146,404
JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,826,686...37,862,937
Ensembl chr 4:37,826,660...37,862,937
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,748,425...30,761,176
Ensembl chr16:30,748,293...30,761,176
JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IBA
IEA
NAS
(PMID:3346228) RGD
GO_Central
Ensembl
UniProt
PMID:3346228 PMID:10634496 PMID:11071367 PMID:16226229 GO_REF:0000033 GO_REF:0000107 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr20:25,248,085...25,298,012
Ensembl chr20:25,248,085...25,298,012
JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:114169 PMID:6449198 PMID:15152027 GO_REF:0000033 GO_REF:0000107 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr14:50,905,217...50,944,483
Ensembl chr14:50,857,891...50,944,483
JBrowse link
G PYGM glycogen phosphorylase, muscle associated acts_upstream_of_or_within
involved_in
ISO
IBA
IDA
IEA
IMP
(PMID:17689562)
(PMID:15282316), (PMID:17689562)
(PMID:1150650)
(PMID:8316268)
RGD
MGI
GO_Central
UniProt
Ensembl
PMID:1150650 PMID:6449198 PMID:8316268 PMID:10572943 PMID:11071367 More... GO_REF:0000033 GO_REF:0000107 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr11:64,746,389...64,760,715
Ensembl chr11:64,746,389...64,759,974
JBrowse link
G STBD1 starch binding domain 1 involved_in IMP (PMID:20810658) GO_Central PMID:20810658 NCBI chr 4:76,306,733...76,311,130
Ensembl chr 4:76,306,733...76,311,130
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:115,828,200...115,841,565
Ensembl chr 5:115,828,200...115,841,837
JBrowse link
G ATG2A autophagy related 2A involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:64,894,546...64,917,209
Ensembl chr11:64,894,546...64,917,209
JBrowse link
G ATG2B autophagy related 2B involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:96,279,195...96,363,341
Ensembl chr14:96,279,195...96,363,341
JBrowse link
G ATG3 autophagy related 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:112,532,510...112,561,962
Ensembl chr 3:112,532,510...112,562,046
JBrowse link
G GAA alpha glucosidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:80,101,581...80,119,881
Ensembl chr17:80,101,533...80,119,881
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,212,877...10,223,128
Ensembl chr12:10,212,458...10,223,128
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:52,622,458...52,714,435
Ensembl chr 8:52,622,458...52,745,843
JBrowse link
G STBD1 starch binding domain 1 involved_in IMP
IEA
(PMID:20810658) GO_Central
Ensembl
PMID:20810658 GO_REF:0000107 NCBI chr 4:76,306,733...76,311,130
Ensembl chr 4:76,306,733...76,311,130
JBrowse link
G WDR45 WD repeat domain 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:49,074,442...49,101,178
Ensembl chr  X:49,074,433...49,101,170
JBrowse link
G WDR45B WD repeat domain 45B involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:82,614,562...82,648,444
Ensembl chr17:82,614,562...82,648,553
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:68,421,281...68,457,496
Ensembl chr17:68,420,948...68,457,513
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:5,190,233...5,233,855
Ensembl chr 7:5,190,196...5,233,840
JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IDA (PMID:11289049) BHF-UCL PMID:11289049 NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr 2:69,319,780...69,387,227
Ensembl chr 2:69,319,780...69,387,250
JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 7:50,590,068...50,793,453
Ensembl chr 7:50,590,063...50,793,462
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in TAS (PMID:19366350) UniProt PMID:19366350 NCBI chr19:42,230,190...42,242,602
Ensembl chr19:42,226,225...42,242,625
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in TAS (PMID:19366350) UniProt PMID:19366350 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IDA
IBA
IEA
(PMID:12556481) UniProt
GO_Central
Ensembl
PMID:12556481 GO_REF:0000033 GO_REF:0000107 NCBI chr17:1,494,577...1,516,612
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G MIR1271 microRNA 1271 acts_upstream_of IDA (PMID:27613089) ARUK-UCL PMID:27613089 NCBI chr 5:176,367,946...176,368,031
Ensembl chr 5:176,367,946...176,368,031
JBrowse link
G MIR15B microRNA 15b acts_upstream_of IMP (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr 3:160,404,588...160,404,685
Ensembl chr 3:160,404,588...160,404,685
JBrowse link
G MIR195 microRNA 195 acts_upstream_of IMP (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr17:7,017,615...7,017,701
Ensembl chr17:7,017,615...7,017,701
JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IDA
IBA
(PMID:16275910) UniProt
GO_Central
PMID:16275910 GO_REF:0000033 NCBI chr 2:241,106,099...241,150,347
Ensembl chr 2:241,106,099...241,150,264
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15857891) MGI
Ensembl
PMID:15857891 GO_REF:0000107 NCBI chr 2:218,822,308...218,831,803
Ensembl chr 2:218,822,308...218,832,086
JBrowse link
G SELENOS selenoprotein S involved_in TAS (PMID:12663463) BHF-UCL PMID:12663463 NCBI chr15:101,270,809...101,277,485
Ensembl chr15:101,270,531...101,277,500
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 5:159,865,086...159,989,205
Ensembl chr 5:159,865,080...159,973,012
JBrowse link
G INS insulin involved_in IMP (PMID:381941) BHF-UCL PMID:381941 NCBI chr11:2,159,779...2,161,209
Ensembl chr11:2,159,779...2,161,221
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IDA (PMID:22225877) MGI PMID:22225877 NCBI chr 8:9,136,255...9,151,539
Ensembl chr 8:9,136,255...9,151,574
JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in NAS
IMP
(PMID:17925406)
(PMID:16814735)
BHF-UCL PMID:16814735 PMID:17925406 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,759
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IMP (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr19:40,230,317...40,285,345
Ensembl chr19:40,230,317...40,285,536
JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) MGI PMID:15231994 NCBI chr 5:160,347,754...160,370,626
Ensembl chr 5:160,347,754...160,370,641
JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:14640889 RGD:1600636 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277
JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IDA (PMID:11311121) UniProt PMID:11311121 NCBI chr12:67,648,745...67,665,406
Ensembl chr12:67,648,338...67,665,406
JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:24142699) Ensembl
MGI
GO_Central
PMID:24142699 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:36,985,043...36,993,131
Ensembl chr 3:36,985,043...36,993,131
JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529
(PMID:24481529)
BHF-UCL PMID:24481529 RGD:12910990 NCBI chr14:76,310,777...76,501,837
Ensembl chr14:76,310,712...76,501,837
JBrowse link
G GCK glucokinase involved_in IMP (PMID:8878425) UniProt PMID:8878425 NCBI chr 7:44,143,213...44,189,439
Ensembl chr 7:44,143,213...44,198,170
JBrowse link
G IGF1 insulin like growth factor 1 involved_in IDA (PMID:21076856) UniProt PMID:21076856 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G IGF2 insulin like growth factor 2 involved_in
acts_upstream_of
IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr11:2,129,117...2,149,566
Ensembl chr11:2,129,112...2,158,391
JBrowse link
G INS insulin involved_in IDA (PMID:17925406) BHF-UCL PMID:17925406 NCBI chr11:2,159,779...2,161,209
Ensembl chr11:2,159,779...2,161,221
JBrowse link
G INSR insulin receptor involved_in
acts_upstream_of
IDA
ISO
IEA
(PMID:17925406)
(PMID:20032056)
BHF-UCL
BHF-UCL
Ensembl
PMID:17925406 PMID:20032056 GO_REF:0000107 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in NAS
IMP
(PMID:17925406)
(PMID:16814735)
BHF-UCL PMID:16814735 PMID:17925406 NCBI chr 2:226,731,312...226,799,820
Ensembl chr 2:226,731,312...226,799,820
JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IMP
NAS
(PMID:16814735)
(PMID:17925406)
BHF-UCL PMID:16814735 PMID:17925406 NCBI chr13:109,752,695...109,786,583
Ensembl chr13:109,752,695...109,786,583
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:9,136,255...9,151,539
Ensembl chr 8:9,136,255...9,151,574
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISS (PMID:15752363) UniProt PMID:15752363 NCBI chr14:23,295,652...23,302,859
Ensembl chr14:23,295,652...23,302,859
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21471512) Ensembl
MGI
PMID:21471512 GO_REF:0000107 NCBI chr 6:5,085,341...5,089,487
Ensembl chr 6:5,085,341...5,089,487
JBrowse link
G PTH parathyroid hormone involved_in IDA (PMID:21076856) UniProt PMID:21076856 NCBI chr11:13,492,054...13,496,181
Ensembl chr11:13,492,054...13,496,181
JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISS (PMID:11001060) BHF-UCL PMID:11001060 NCBI chr10:95,311,773...95,561,371
Ensembl chr10:95,311,771...95,561,414
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 involved_in ISO
IEA
RGD
Ensembl
PMID:22998876 GO_REF:0000107 RGD:329412477 NCBI chr 1:167,809,386...167,914,134
Ensembl chr 1:167,809,386...167,914,215
JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 5:159,865,086...159,989,205
Ensembl chr 5:159,865,080...159,973,012
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (PMID:10391216) MGI PMID:10391216 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IMP (PMID:33799212) FlyBase PMID:33799212 NCBI chr  X:72,578,814...72,714,306
Ensembl chr  X:72,578,814...72,714,319
JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) FlyBase PMID:36077341 NCBI chr16:47,461,299...47,701,523
Ensembl chr16:47,461,123...47,701,523
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in TAS
IEA
(PMID:10487978) UniProt
Ensembl
PMID:10487978 GO_REF:0000107 NCBI chr16:30,748,425...30,761,176
Ensembl chr16:30,748,293...30,761,176
JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IMP (PMID:8940145) BHF-UCL PMID:8940145 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,759
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:1,494,577...1,516,612
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISO
IEA
RGD
Ensembl
PMID:7720853 GO_REF:0000107 RGD:2304267 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:113,876,777...113,919,009
Ensembl chr 7:113,876,777...114,075,920
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:7720853 PMID:11716774 GO_REF:0000033 GO_REF:0000107 RGD:2304267 RGD:2306167 NCBI chr 8:9,136,255...9,151,539
Ensembl chr 8:9,136,255...9,151,574
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in ISO
IBA
RGD
GO_Central
PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr10:91,628,442...91,633,071
Ensembl chr10:91,628,442...91,633,071
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:11716774 GO_REF:0000033 GO_REF:0000107 RGD:2306167 NCBI chr20:59,936,663...59,940,305
Ensembl chr20:59,936,663...59,940,305
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO
IBA
RGD
GO_Central
PMID:15752363 GO_REF:0000033 RGD:2306166 NCBI chr14:23,295,652...23,302,859
Ensembl chr14:23,295,652...23,302,859
JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:21668450) MGI
GO_Central
PMID:21668450 GO_REF:0000033 NCBI chr  X:49,269,793...49,301,469
Ensembl chr  X:49,269,793...49,301,461
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:5,085,341...5,089,487
Ensembl chr 6:5,085,341...5,089,487
JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISO
IEA
RGD
Ensembl
PMID:7720853 GO_REF:0000107 RGD:2304267 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA
RGD
Ensembl
InterPro
PMID:7720853 PMID:11716774 GO_REF:0000002 GO_REF:0000107 RGD:2304267 RGD:2306167 NCBI chr 8:9,136,255...9,151,539
Ensembl chr 8:9,136,255...9,151,574
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr10:91,628,442...91,633,071
Ensembl chr10:91,628,442...91,633,071
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in ISO
IEA
RGD
Ensembl
PMID:11716774 GO_REF:0000107 RGD:2306167 NCBI chr20:59,936,663...59,940,305
Ensembl chr20:59,936,663...59,940,305
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr14:23,295,652...23,302,859
Ensembl chr14:23,295,652...23,302,859
JBrowse link
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCGR glucagon receptor involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,804,150...81,814,008
Ensembl chr17:81,804,132...81,814,008
JBrowse link
G KHK ketohexokinase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:22371574) GO_Central
MGI
PMID:22371574 GO_REF:0000033 NCBI chr 2:27,086,772...27,100,762
Ensembl chr 2:27,086,772...27,100,762
JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19884348) Ensembl
MGI
PMID:19884348 GO_REF:0000107 NCBI chr11:2,928,273...2,929,420
Ensembl chr11:2,928,273...2,929,420
JBrowse link
G POMC proopiomelanocortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21184805) Ensembl
MGI
PMID:21184805 GO_REF:0000107 NCBI chr 2:25,160,860...25,168,580
Ensembl chr 2:25,160,853...25,168,903
JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in ISS UniProt GO_REF:0000024 NCBI chr13:46,334,681...46,390,042
Ensembl chr13:46,334,681...46,438,190
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20486
    cellular process 19728
      metabolic process 13561
        generation of precursor metabolites and energy 525
          energy derivation by oxidation of organic compounds 379
            energy reserve metabolic process 113
              glycogen metabolic process 98
                glycogen biosynthetic process + 52
                glycogen catabolic process + 33
                negative regulation of glycogen metabolic process + 16
                positive regulation of glycogen metabolic process + 26
                regulation of glycogen metabolic process + 49
Path 2
Term Annotations click to browse term
  biological_process 20486
    cellular process 19728
      metabolic process 13561
        primary metabolic process 11774
          carbohydrate metabolic process 655
            polysaccharide metabolic process 128
              glucan metabolic process 100
                glycogen metabolic process 98
                  glycogen biosynthetic process + 52
                  glycogen catabolic process + 33
                  negative regulation of glycogen metabolic process + 16
                  positive regulation of glycogen metabolic process + 26
                  regulation of glycogen metabolic process + 49
paths to the root