Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:glycogen metabolic process
go back to main search page
Accession:GO:0005977 term browser browse the term
Definition:The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages.
Synonyms:exact_synonym: glycogen metabolism
 xref: Reactome:R-HSA-8982491 "Glycogen metabolism"


show annotations for term's descendants           Sort by:
glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11785984) Ensembl
MGI		 PMID:11785984 GO_REF:0000107 NCBI chr 6:50,039,661...50,112,543
Ensembl chr 6:50,041,947...50,112,279 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12783884) Ensembl
MGI		 PMID:12783884 GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G COMT catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:30179860) MGI PMID:30179860 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008 		JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:23663739), (PMID:24914213), (PMID:25416783)
(PMID:21552327)
(PMID:28973665)		 UniProt
Ensembl
MGI		 PMID:21552327 PMID:23663739 PMID:24914213 PMID:25416783 PMID:28973665 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:36,835,775...36,977,653
Ensembl chr 1:36,870,594...36,931,847 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8640227) Ensembl
MGI		 PMID:8640227 GO_REF:0000107 NCBI chr 9:20,132,973...20,143,642
Ensembl chr 9:20,132,978...20,143,642 		JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11590121), (PMID:15169761), (PMID:9668092)
(PMID:10547605), (PMID:12115977), (PMID:15207257), (PMID:9384603)		 Ensembl
MGI		 PMID:9384603 PMID:9668092 PMID:10547605 PMID:11590121 PMID:12115977 More... GO_REF:0000107 NCBI chr 9:1,601,092...1,615,582
Ensembl chr 9:1,601,121...1,656,597 		JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17937387) Ensembl
MGI		 PMID:17937387 GO_REF:0000107 NCBI chr12:11,500,363...11,503,075
Ensembl chr12:11,500,392...11,503,481 		JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:112,129,116...112,138,714
Ensembl chr 1:112,103,825...112,138,559 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G GYS1 glycogen synthase 1 ISO RGD PMID:6244274 PMID:10572943 RGD:1642811 RGD:2304186 NCBI chr 1:107,401,056...107,417,273
Ensembl chr 1:107,401,114...107,417,122 		JBrowse link
G GYS2 glycogen synthase 2 ISO RGD PMID:1733780 PMID:6096366 RGD:2304113 RGD:2304117 NCBI chr27:25,509,833...25,558,874
Ensembl chr27:25,509,655...25,558,844 		JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10205167) Ensembl
MGI		 PMID:10205167 GO_REF:0000107 NCBI chr 2:43,214,050...43,273,014
Ensembl chr 2:43,214,050...43,248,124 		JBrowse link
G LEPR leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28973665) Ensembl
MGI		 PMID:28973665 GO_REF:0000107 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636 		JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24914213), (PMID:25416783)
(PMID:23663739)		 Ensembl
MGI		 PMID:23663739 PMID:24914213 PMID:25416783 GO_REF:0000107 NCBI chr35:16,920,687...16,921,829
Ensembl chr35:16,920,687...16,921,829 		JBrowse link
G PCDH12 protocadherin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477666) Ensembl
MGI		 PMID:18477666 GO_REF:0000107 NCBI chr 2:36,886,224...36,900,373
Ensembl chr 2:36,886,226...36,900,003 		JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (PMID:30179860) MGI PMID:30179860 NCBI chr 8:48,059,554...48,110,534
Ensembl chr 8:48,059,552...48,075,170 		JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:56,579,538...56,758,293
Ensembl chr  X:56,581,435...56,757,905 		JBrowse link
G PHKA2 phosphorylase kinase regulatory subunit alpha 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:14,911,511...14,989,923
Ensembl chr  X:14,896,206...14,989,283 		JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 2:67,260,532...67,476,596
Ensembl chr 2:67,254,542...67,476,532 		JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:3953807 PMID:6281247 GO_REF:0000002 GO_REF:0000043 RGD:2304176 RGD:2305955 NCBI chr 6:565,560...577,754
Ensembl chr 6:565,711...577,739 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
InterPro
UniProt		 PMID:1370475 PMID:6281247 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 RGD:2304176 RGD:727546 NCBI chr 6:17,418,927...17,428,431
Ensembl chr 6:17,418,926...17,428,359 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chr26:8,497,350...8,518,467
Ensembl chr26:8,495,067...8,518,675 		JBrowse link
G PPP1R1A protein phosphatase 1 regulatory inhibitor subunit 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr27:766,757...770,994
Ensembl chr27:766,338...771,598 		JBrowse link
G PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr33:30,525,906...30,555,415
Ensembl chr33:30,525,906...30,555,415 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA UniProt GO_REF:0000043 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9045612)
(PMID:21552327)		 Ensembl
MGI
UniProt		 PMID:9045612 PMID:21552327 GO_REF:0000043 GO_REF:0000107 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IEA UniProt GO_REF:0000043 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219 		JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,521,304...15,786,237
Ensembl chr16:15,522,111...15,785,854 		JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IEA		 RGD
UniProt		 PMID:1554349 GO_REF:0000043 RGD:2304136 NCBI chr23:1,440,826...1,494,570
Ensembl chr23:1,420,052...1,496,245 		JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:1554349 PMID:1733780 PMID:2803260 PMID:6096366 PMID:8550381 More... GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1601233 RGD:2304113 RGD:2304115 RGD:2304117 RGD:2304119 RGD:2304136 NCBI chr 8:27,264,778...27,307,977
Ensembl chr 8:27,223,273...27,307,977 		JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in ISO
IEA		 RGD
UniProt		 PMID:6244274 PMID:8550381 PMID:10572943 GO_REF:0000043 RGD:1642811 RGD:2304119 RGD:2304186 NCBI chr18:52,398,192...52,410,731
Ensembl chr18:52,398,056...52,410,464 		JBrowse link
G SLC37A4 solute carrier family 37 member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12925567), (PMID:16891306) Ensembl
MGI		 PMID:12925567 PMID:16891306 GO_REF:0000107 NCBI chr 5:14,823,485...14,830,007
Ensembl chr 5:14,823,499...14,830,004 		JBrowse link
G STK40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23293024) Ensembl
MGI		 PMID:23293024 GO_REF:0000107 NCBI chr15:5,894,125...5,934,461
Ensembl chr15:5,894,933...5,932,791 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:23260145) MGI PMID:23260145 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:63,532,366...63,598,362
Ensembl chr10:63,533,171...63,597,452 		JBrowse link
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:70,852,223...70,881,979
Ensembl chr 6:70,853,061...70,878,668 		JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 6:50,039,661...50,112,543
Ensembl chr 6:50,041,947...50,112,279 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in		 ISO (PMID:28536304)
(PMID:18040046)
(PMID:17118331)
(PMID:31042462)		 MGI PMID:17118331 PMID:18040046 PMID:28536304 PMID:31042462 NCBI chr 1:36,835,775...36,977,653
Ensembl chr 1:36,870,594...36,931,847 		JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:24142699) Ensembl
MGI		 PMID:24142699 GO_REF:0000107 NCBI chr23:6,880,996...6,888,863
Ensembl chr23:6,886,885...6,888,711 		JBrowse link
G GBE1 1,4-alpha-glucan branching enzyme 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
InterPro		 PMID:6449198 GO_REF:0000002 GO_REF:0000033 RGD:1642743 NCBI chr31:5,742,744...6,010,881
Ensembl chr31:5,742,744...6,093,612 		JBrowse link
G GCK glucokinase ISO RGD PMID:17028192 RGD:1581879
G GYG1 glycogenin 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
Ensembl		 PMID:8224611 PMID:10710493 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:2303736 RGD:2304070 NCBI chr23:43,831,942...43,864,135
Ensembl chr23:43,826,216...43,864,019 		JBrowse link
G GYG2 glycogenin 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:1,476,306...1,512,915
Ensembl chr  X:1,475,951...1,511,534 		JBrowse link
G GYS1 glycogen synthase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:15282316) RGD
GO_Central
MGI
Ensembl
UniProt
InterPro		 PMID:6449198 PMID:7671134 PMID:15282316 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1642743 RGD:2303748 NCBI chr 1:107,401,056...107,417,273
Ensembl chr 1:107,401,114...107,417,122 		JBrowse link
G GYS2 glycogen synthase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
Ensembl
InterPro		 PMID:114169 PMID:6449198 PMID:15138155 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582633 RGD:1642743 RGD:2304128 NCBI chr27:25,509,833...25,558,874
Ensembl chr27:25,509,655...25,558,844 		JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28536304) Ensembl
MGI		 PMID:28536304 GO_REF:0000107 NCBI chr35:16,920,687...16,921,829
Ensembl chr35:16,920,687...16,921,829 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053 		JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (PMID:20159955) UniProt PMID:20159955 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755 		JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:74,344,670...74,382,511
Ensembl chr 3:74,344,810...74,382,494 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10683377) Ensembl
MGI
UniProt		 PMID:10683377 GO_REF:0000104 GO_REF:0000107 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G acts_upstream_of ISO (PMID:21471512) MGI PMID:21471512
G PTGES3 prostaglandin E synthase 3 acts_upstream_of_or_within ISO (PMID:17438133) MGI PMID:17438133 NCBI chr10:885,744...903,814
Ensembl chr10:870,392...909,161 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr10:63,532,366...63,598,362
Ensembl chr10:63,533,171...63,597,452 		JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999 		JBrowse link
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684 		JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl
InterPro		 PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 6:50,039,661...50,112,543
Ensembl chr 6:50,041,947...50,112,279 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10625614) Ensembl
MGI		 PMID:10625614 GO_REF:0000107 NCBI chr 9:20,132,973...20,143,642
Ensembl chr 9:20,132,978...20,143,642 		JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:11328962)
(PMID:10838256)
(PMID:11785984)		 RGD
GO_Central
MGI
Ensembl		 PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 GO_REF:0000033 GO_REF:0000107 RGD:1599504 RGD:1599506 NCBI chr 9:1,601,092...1,615,582
Ensembl chr 9:1,601,121...1,656,597 		JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of ISO (PMID:10391216) MGI PMID:10391216 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within ISO (PMID:19696889) MGI PMID:19696889 NCBI chr27:6,620,300...6,640,649
Ensembl chr27:6,620,300...6,663,670 		JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:74,344,670...74,382,511
Ensembl chr 3:74,344,810...74,382,494 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,418,927...17,428,431
Ensembl chr 6:17,418,926...17,428,359 		JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:10634496 PMID:11071367 PMID:16226229 GO_REF:0000033 GO_REF:0000107 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr23:1,440,826...1,494,570
Ensembl chr23:1,420,052...1,496,245 		JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:114169 PMID:6449198 PMID:15152027 GO_REF:0000033 GO_REF:0000107 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr 8:27,264,778...27,307,977
Ensembl chr 8:27,223,273...27,307,977 		JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:17689562)
(PMID:15282316), (PMID:17689562)		 RGD
GO_Central
MGI
Ensembl		 PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 More... GO_REF:0000033 GO_REF:0000107 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr18:52,398,192...52,410,731
Ensembl chr18:52,398,056...52,410,464 		JBrowse link
G STBD1 starch binding domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:932,245...953,070
Ensembl chr32:951,698...952,897 		JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:5,531,062...5,543,034
Ensembl chr11:5,531,759...5,542,743 		JBrowse link
G ATG2A autophagy related 2A involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:52,258,070...52,277,953
Ensembl chr18:52,258,187...52,277,965 		JBrowse link
G ATG2B autophagy related 2B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:65,039,960...65,110,811
Ensembl chr 8:65,044,194...65,110,796 		JBrowse link
G ATG3 autophagy related 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr33:17,046,951...17,073,203
Ensembl chr33:17,046,973...17,073,150 		JBrowse link
G GAA alpha glucosidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,601,092...1,615,582
Ensembl chr 9:1,601,121...1,656,597 		JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in ISO (PMID:20810658) MGI PMID:20810658 NCBI chr27:35,783,203...35,791,576
Ensembl chr27:35,782,330...35,791,569 		JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr29:4,445,668...4,544,223
Ensembl chr29:4,375,785...4,517,168 		JBrowse link
G STBD1 starch binding domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:932,245...953,070
Ensembl chr32:951,698...952,897 		JBrowse link
G WDR45 WD repeat domain 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:42,221,261...42,237,535
Ensembl chr  X:42,218,046...42,226,422 		JBrowse link
G WDR45B WD repeat domain 45B involved_in IBA GO_Central GO_REF:0000033
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147 		JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:12,656,469...12,698,623
Ensembl chr 6:12,658,239...12,698,734 		JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:11289049) BHF-UCL PMID:11289049 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007 		JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr18:1,890,689...2,014,836
Ensembl chr18:1,890,792...2,014,839 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363 		JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G MIR15B microRNA mir-15b acts_upstream_of ISO (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr34:26,460,663...26,460,722
Ensembl chr34:26,460,645...26,460,741 		JBrowse link
G MIR195 microRNA mir-195 acts_upstream_of ISO (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr 5:32,045,450...32,045,510
Ensembl chr 5:32,045,450...32,045,510 		JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr25:51,145,094...51,181,040
Ensembl chr25:51,144,912...51,177,818 		JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15857891) MGI
Ensembl		 PMID:15857891 GO_REF:0000107 NCBI chr37:25,405,794...25,414,745
Ensembl chr37:25,406,190...25,414,961 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999 		JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,359,038...113,407,119
Ensembl chr 1:113,359,575...113,407,131 		JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) MGI PMID:15231994 NCBI chr 4:50,352,245...50,372,412
Ensembl chr 4:50,367,910...50,372,597 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:14640889 RGD:1600636 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:9,982,245...9,994,327
Ensembl chr10:9,980,080...9,991,934 		JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:24142699) Ensembl
GO_Central
MGI		 PMID:24142699 GO_REF:0000033 GO_REF:0000107 NCBI chr23:6,880,996...6,888,863
Ensembl chr23:6,886,885...6,888,711 		JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529
(PMID:24481529)		 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332 		JBrowse link
G GCK glucokinase involved_in IEA Ensembl GO_REF:0000107
G IGF1 insulin like growth factor 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G IGF2 insulin like growth factor 2 acts_upstream_of ISO (PMID:20032056) BHF-UCL PMID:20032056 NCBI chr18:46,294,036...46,311,982
Ensembl chr18:46,294,019...46,311,982 		JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122 		JBrowse link
G INSR insulin receptor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20032056) Ensembl
BHF-UCL		 PMID:20032056 GO_REF:0000107 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:39,624,554...39,687,991 JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,197,016...58,229,026
Ensembl chr22:58,223,387...58,227,535 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G acts_upstream_of_or_within
involved_in		 ISO (PMID:21471512)
(PMID:31553910)		 MGI
FlyBase		 PMID:21471512 PMID:31553910
G PTH parathyroid hormone involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr21:36,417,062...36,419,967
Ensembl chr21:36,417,058...36,419,967 		JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (PMID:11001060) BHF-UCL PMID:11001060 NCBI chr28:8,834,530...9,063,739
Ensembl chr28:8,837,338...9,063,777 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 ISO RGD PMID:22998876 RGD:329412477 NCBI chr 7:30,576,445...30,660,926
Ensembl chr 7:30,577,591...30,660,926 		JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999 		JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (PMID:10391216) MGI PMID:10391216 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in ISO (PMID:33799212) FlyBase PMID:33799212 NCBI chr  X:56,579,538...56,758,293
Ensembl chr  X:56,581,435...56,757,905 		JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) FlyBase PMID:36077341 NCBI chr 2:67,260,532...67,476,596
Ensembl chr 2:67,254,542...67,476,532 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,418,927...17,428,431
Ensembl chr 6:17,418,926...17,428,359 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:53,169,836...53,216,817
Ensembl chr14:53,170,954...53,217,169 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IBA		 RGD
GO_Central		 PMID:7720853 PMID:11716774 GO_REF:0000033 RGD:2304267 RGD:2306167 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in ISO
IBA		 RGD
GO_Central		 PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in ISO
IBA		 RGD
GO_Central		 PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO
IBA		 RGD
GO_Central		 PMID:15752363 GO_REF:0000033 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524 		JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21668450) MGI
GO_Central		 PMID:21668450 GO_REF:0000033 NCBI chr  X:42,362,335...42,378,480
Ensembl chr  X:42,362,370...42,378,012 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA		 RGD
InterPro		 PMID:7720853 PMID:11716774 GO_REF:0000002 RGD:2304267 RGD:2306167 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524 		JBrowse link
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCGR glucagon receptor involved_in ISO (PMID:12552113) UniProt PMID:12552113 NCBI chr 9:455,744...463,070
Ensembl chr 9:344,438...459,925 		JBrowse link
G KHK ketohexokinase acts_upstream_of_or_within ISO (PMID:22371574) MGI PMID:22371574 NCBI chr17:21,079,907...21,092,510
Ensembl chr17:21,079,907...21,092,510 		JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19884348) Ensembl
MGI		 PMID:19884348 GO_REF:0000107
G POMC proopiomelanocortin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21184805) Ensembl
MGI		 PMID:21184805 GO_REF:0000107 NCBI chr17:19,431,396...19,438,247
Ensembl chr17:19,431,585...19,434,440 		JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in ISO (PMID:30704899) UniProt PMID:30704899 NCBI chr22:4,874,384...4,903,044
Ensembl chr22:4,874,575...4,903,033 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22103
    cellular process 21633
      metabolic process 15381
        generation of precursor metabolites and energy 492
          energy derivation by oxidation of organic compounds 343
            energy reserve metabolic process 106
              glycogen metabolic process 94
                glycogen biosynthetic process + 49
                glycogen catabolic process + 33
                negative regulation of glycogen metabolic process + 13
                positive regulation of glycogen metabolic process + 26
                regulation of glycogen metabolic process + 46
Path 2
Term Annotations click to browse term
  biological_process 22103
    cellular process 21633
      metabolic process 15381
        primary metabolic process 13982
          carbohydrate metabolic process 623
            polysaccharide metabolic process 122
              glucan metabolic process 96
                glycogen metabolic process 94
                  glycogen biosynthetic process + 49
                  glycogen catabolic process + 33
                  negative regulation of glycogen metabolic process + 13
                  positive regulation of glycogen metabolic process + 26
                  regulation of glycogen metabolic process + 46
paths to the root