Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:cell cortex
go back to main search page
Accession:GO:0005938 term browser browse the term
Definition:The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
Synonyms:related_synonym: cell periphery;   peripheral cytoplasm
 xref: Wikipedia:Cell_cortex



show annotations for term's descendants           Sort by:
 
cell cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr1a actin related protein 1A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:245,237,821...245,256,618
Ensembl chr 1:245,237,826...245,256,495
JBrowse link
G Actr2 actin related protein 2 located_in ISO (MGI:5006872|PMID:21494665) RGD PMID:21494665 MGI:5006872 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
JBrowse link
G Add3 adducin 3 located_in IEA
ISO
GO_REF:0000107
(MGI:80989|PMID:1864459)
Ensembl
RGD
PMID:1864459 GO_REF:0000107 MGI:80989 NCBI chr 1:252,147,341...252,255,126
Ensembl chr 1:252,147,386...252,255,124
JBrowse link
G Agtrap angiotensin II receptor-associated protein located_in ISO (MGI:1338561|PMID:10358057) RGD PMID:10358057 MGI:1338561 NCBI chr 5:158,507,427...158,519,036
Ensembl chr 5:158,508,749...158,519,036
JBrowse link
G Akap13 A-kinase anchoring protein 13 located_in ISS
ISO
GO_REF:0000024
(PMID:11546812)
UniProt
RGD
PMID:11546812 GO_REF:0000024 NCBI chr 1:129,313,183...129,619,647
Ensembl chr 1:129,314,402...129,619,646
JBrowse link
G Akt2 AKT serine/threonine kinase 2 located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5292403|PMID:21907143)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21907143 GO_REF:0000024 GO_REF:0000107 MGI:5292403 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
JBrowse link
G Anln anillin, actin binding protein located_in ISO (PMID:23870127) RGD PMID:23870127 NCBI chr 8:20,858,227...20,921,602
Ensembl chr 8:20,858,228...20,921,538
JBrowse link
G Anxa2 annexin A2 IDA RGD PMID:19193640 RGD:7242275 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Apc APC regulator of WNT signaling pathway IDA RGD PMID:18042042 RGD:6484521 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Aqp7 aquaporin 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:56,171,649...56,186,642
Ensembl chr 5:56,172,519...56,186,642
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Arf6 ADP-ribosylation factor 6 located_in ISO (PMID:10913182) RGD PMID:10913182 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Arfip2 ADP-ribosylation factor interacting protein 2 located_in ISO (PMID:9312003) RGD PMID:9312003 NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
JBrowse link
G Arhgap32 Rho GTPase activating protein 32 located_in
is_active_in
ISO
IBA
(MGI:2449822|PMID:12454018)
PMID:21873635
RGD PMID:12454018 PMID:21873635 MGI:2449822, RGD:13792537 NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
JBrowse link
G Arhgef7 Rho guanine nucleotide exchange factor 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:77,671,021...77,782,593
Ensembl chr16:77,671,023...77,782,697
JBrowse link
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 IDA RGD PMID:10607391 RGD:632270 NCBI chr  X:59,919,560...60,077,538
Ensembl chr  X:59,920,870...60,077,513
JBrowse link
G Axin1 axin 1 located_in ISO (MGI:1337175|PMID:10330403) RGD PMID:10330403 MGI:1337175 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bfsp1 beaded filament structural protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:131,195,087...131,252,668
Ensembl chr 3:131,195,087...131,229,337
JBrowse link
G Bfsp2 beaded filament structural protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:104,006,226...104,063,399
Ensembl chr 8:104,006,226...104,063,399
JBrowse link
G Bin2 bridging integrator 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:131,742,001...131,768,208
Ensembl chr 7:131,742,002...131,786,285
JBrowse link
G C2cd5 C2 calcium-dependent domain containing 5 located_in ISO (PMID:21907143) RGD PMID:21907143 NCBI chr 4:175,969,544...176,055,597
Ensembl chr 4:175,969,545...176,055,558
JBrowse link
G Capn10 calpain 10 IDA RGD PMID:17150188 RGD:1625052 NCBI chr 9:93,498,132...93,510,494
Ensembl chr 9:93,498,478...93,510,494
JBrowse link
G Cav1 caveolin 1 located_in IEA
ISO
GO_REF:0000107
(MGI:1351425|PMID:10631317)
Ensembl
RGD
PMID:10631317 GO_REF:0000107 MGI:1351425 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ccn2 cellular communication network factor 2 IDA RGD PMID:19359517 RGD:2314527 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Cd302 CD302 molecule located_in ISO
IEA
(PMID:17947679)
GO_REF:0000107
RGD
Ensembl
PMID:17947679 GO_REF:0000107 NCBI chr 3:44,722,324...44,756,045
Ensembl chr 3:44,722,325...44,756,045
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 located_in ISO (PMID:17113391) RGD PMID:17113391 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in ISO (PMID:17113391) RGD PMID:17113391 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Clic5 chloride intracellular channel 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:16,710,980...16,813,427
Ensembl chr 9:16,710,980...16,813,427
JBrowse link
G Cnksr1 connector enhancer of kinase suppressor of Ras 1 located_in ISO (PMID:15075335) RGD PMID:15075335 NCBI chr 5:146,447,495...146,458,332
Ensembl chr 5:146,447,497...146,458,212
JBrowse link
G Cobl cordon-bleu WH2 repeat protein located_in IEA
ISO
IDA
GO_REF:0000107
(MGI:5287916|PMID:21725280)
Ensembl
RGD
PMID:21725280 PMID:21725280 GO_REF:0000107 MGI:5287916, RGD:8554579 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800
JBrowse link
G Col10a1 collagen type X alpha 1 chain located_in ISO (MGI:85084|PMID:9008714) RGD PMID:9008714 MGI:85084 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
JBrowse link
G Crip2 cysteine-rich protein 2 located_in ISO (MGI:3042027|PMID:12839623) RGD PMID:12839623 MGI:3042027 NCBI chr 6:132,221,120...132,226,066
Ensembl chr 6:132,221,082...132,226,065
JBrowse link
G Csnk1g2 casein kinase 1, gamma 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:9,076,739...9,095,082
Ensembl chr 7:9,076,740...9,095,052
JBrowse link
G Ctnnb1 catenin beta 1 located_in ISO
ISS
(PMID:19038973)
GO_REF:0000024
RGD
UniProt
PMID:19038973 GO_REF:0000024 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctsz cathepsin Z located_in ISO (PMID:19433310) RGD PMID:19433310 NCBI chr 3:163,224,875...163,235,645
Ensembl chr 3:163,224,875...163,235,645
JBrowse link
G Cttn cortactin located_in ISO (PMID:14742709), (PMID:24700464)
(MGI:2671745|PMID:12913069)
RGD PMID:12913069 PMID:14742709 PMID:24700464 MGI:2671745 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Cttnbp2 cortactin binding protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:46,800,981...46,964,631
JBrowse link
G Cytip cytohesin 1 interacting protein is_active_in
located_in
IBA
ISO
PMID:21873635
(PMID:12606567)
RGD PMID:12606567 PMID:21873635 RGD:13792537 NCBI chr 3:42,698,058...42,774,955
Ensembl chr 3:42,698,768...42,725,993
JBrowse link
G Daxx death-domain associated protein IDA RGD PMID:12786973 RGD:2298728 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dbnl drebrin-like located_in ISS
ISO
GO_REF:0000024
(MGI:2671745|PMID:12913069)
UniProt
RGD
PMID:12913069 GO_REF:0000024 MGI:2671745 NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
JBrowse link
G Dctn1 dynactin subunit 1 colocalizes_with
located_in
ISO
IEA
ISS
(PMID:23509069)
GO_REF:0000044
(PMID:23027904)
GO_REF:0000024
RGD
UniProt
PMID:23027904 PMID:23509069 GO_REF:0000024 GO_REF:0000044 NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Dctn4 dynactin subunit 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:53,982,355...54,009,409
Ensembl chr18:53,982,358...54,009,399
JBrowse link
G Dnm2 dynamin 2 located_in ISO (PMID:24824085) RGD PMID:24824085 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Drd4 dopamine receptor D4 IDA RGD PMID:10898094 RGD:1625055 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:129,615,208...129,680,888
Ensembl chr 6:129,609,397...129,680,883
JBrowse link
G Ect2 epithelial cell transforming 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
JBrowse link
G Eno1 enolase 1 located_in ISO
IDA
(PMID:19433310) RGD PMID:19433310 PMID:19433310 RGD:12792998 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 located_in ISO (PMID:23870127) RGD PMID:23870127 NCBI chr 5:144,110,010...144,264,037
Ensembl chr 5:144,111,906...144,237,821
JBrowse link
G Epb41l2 erythrocyte membrane protein band 4.1-like 2 located_in ISO (PMID:23870127) RGD PMID:23870127 NCBI chr 1:19,863,010...20,037,795
Ensembl chr 1:19,863,009...20,037,721
JBrowse link
G Epn3 epsin 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:79,438,978...79,449,516
Ensembl chr10:79,438,978...79,447,356
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISS
ISO
GO_REF:0000024
(MGI:5476881|PMID:23314863), (MGI:5486573|PMID:11524436)
UniProt
RGD
PMID:11524436 PMID:23314863 GO_REF:0000024 MGI:5476881 MGI:5486573 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Ermn ermin located_in
is_active_in
ISO
IBA
(PMID:20934411)
PMID:21873635
RGD PMID:20934411 PMID:21873635 RGD:13792537 NCBI chr 3:42,628,160...42,633,816
Ensembl chr 3:42,626,309...42,633,744
JBrowse link
G Ezr ezrin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Fam110c family with sequence similarity 110, member C located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:19698782)
UniProt
RGD
PMID:19698782 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:47,638,466...47,644,723
Ensembl chr 6:47,638,276...47,644,634
JBrowse link
G Fer FER tyrosine kinase located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Fga fibrinogen alpha chain located_in ISO (MGI:3699674|PMID:15914557) RGD PMID:15914557 MGI:3699674 NCBI chr 2:168,365,364...168,381,533
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Fgb fibrinogen beta chain located_in ISO (MGI:3699674|PMID:15914557) RGD PMID:15914557 MGI:3699674 NCBI chr 2:168,394,901...168,402,863
Ensembl chr 2:168,394,916...168,405,979
JBrowse link
G Fgf1 fibroblast growth factor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 located_in ISO (PMID:17471512) RGD PMID:17471512 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fgg fibrinogen gamma chain located_in ISO (MGI:3699674|PMID:15914557) RGD PMID:15914557 MGI:3699674 NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322
JBrowse link
G Flna filamin A IDA RGD PMID:22872576 RGD:7207404 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Fmn2 formin 2 located_in ISO (MGI:5305386|PMID:21983562) RGD PMID:21983562 MGI:5305386 NCBI chr13:86,454,256...86,771,437 JBrowse link
G Fnbp1 formin binding protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:14,316,011...14,386,704
Ensembl chr 3:14,309,640...14,424,881
JBrowse link
G Fnbp1l formin binding protein 1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:210,647,241...210,748,203
Ensembl chr 2:210,647,246...210,738,455
JBrowse link
G Frmpd1 FERM and PDZ domain containing 1 colocalizes_with ISO
IBA
(PMID:18566450)
PMID:21873635
RGD PMID:18566450 PMID:21873635 RGD:13792537 NCBI chr 5:59,443,076...59,545,125
Ensembl chr 5:59,443,076...59,545,080
JBrowse link
G Fry FRY microtubule binding protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:4,493,890...4,887,118
Ensembl chr12:4,493,891...4,799,116
JBrowse link
G Fryl FRY like transcription coactivator is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:34,956,623...35,189,738
Ensembl chr14:34,956,620...35,190,222
JBrowse link
G Fscn1 fascin actin-bundling protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Gad1 glutamate decarboxylase 1 located_in ISO (MGI:1926701|PMID:11064363) RGD PMID:11064363 MGI:1926701 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333
JBrowse link
G Gck glucokinase IDA hepatocytes after stimulation with fructose and/or glucose, preferentially localized at the opposing face of adjacent cells RGD PMID:12369705 RGD:2301912 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 located_in ISO (PMID:12857860) RGD PMID:12857860 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Glrx3 glutaredoxin 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:192,241,707...192,272,012
Ensembl chr 1:192,241,701...192,272,010
JBrowse link
G Gnai1 G protein subunit alpha i1 located_in ISO (PMID:23870127) RGD PMID:23870127 NCBI chr 4:16,813,941...16,898,111
Ensembl chr 4:16,814,001...16,896,417
JBrowse link
G Gpsm1 G-protein signaling modulator 1 colocalizes_with ISO (PMID:18566450) RGD PMID:18566450 NCBI chr 3:9,140,816...9,167,828
Ensembl chr 3:9,128,636...9,167,827
JBrowse link
G Gpsm2 G-protein signaling modulator 2 colocalizes_with
located_in
ISO (PMID:22074847)
(PMID:21816348), (PMID:23027904), (PMID:23783028), (PMID:23870127)
RGD PMID:21816348 PMID:22074847 PMID:23027904 PMID:23783028 PMID:23870127 NCBI chr 2:196,327,149...196,375,322
Ensembl chr 2:196,327,149...196,375,154
JBrowse link
G Grk4 G protein-coupled receptor kinase 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:75,998,554...76,080,808
Ensembl chr14:76,006,218...76,080,693
JBrowse link
G Grm7 glutamate metabotropic receptor 7 located_in ISO
IEA
(PMID:9630572)
GO_REF:0000107
RGD
Ensembl
PMID:9630572 GO_REF:0000107 NCBI chr 4:143,730,862...144,613,230
Ensembl chr 4:143,731,259...144,612,344
JBrowse link
G Gys2 glycogen synthase 2 located_in IDA PMID:11415431
PMID:9003423
UniProt PMID:11415431 PMID:9003423 RGD:8554625, RGD:8553883 NCBI chr 4:175,365,054...175,406,228
Ensembl chr 4:175,365,054...175,406,228
JBrowse link
G Hax1 HCLS1 associated protein X-1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:175,434,242...175,437,926
Ensembl chr 2:175,434,238...175,437,714
JBrowse link
G Hip1r huntingtin interacting protein 1 related located_in ISO (MGI:5805370|PMID:11564758) RGD PMID:11564758 MGI:5805370 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734
JBrowse link
G Hmcn1 hemicentin 1 located_in ISO (MGI:3717022|PMID:17015624) RGD PMID:17015624 MGI:3717022 NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
JBrowse link
G Hmcn2 hemicentin 2 located_in ISO (MGI:3717022|PMID:17015624) RGD PMID:17015624 MGI:3717022 NCBI chr 3:14,588,353...14,738,320 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:16518874 RGD:10054427 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Insc INSC, spindle orientation adaptor protein colocalizes_with ISO (PMID:22074847) RGD PMID:22074847 NCBI chr 1:168,993,032...169,100,438
Ensembl chr 1:168,993,032...169,100,433
JBrowse link
G Itch itchy E3 ubiquitin protein ligase located_in ISO (MGI:3694584|PMID:17137798) RGD PMID:17137798 MGI:3694584 NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543
JBrowse link
G Itgb4 integrin subunit beta 4 IDA RGD PMID:16409251 RGD:1581345 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 located_in ISO (MGI:1327484|PMID:9858485) RGD PMID:9858485 MGI:1327484 NCBI chr 4:179,028,594...179,434,657
Ensembl chr 4:179,027,281...179,404,164
JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160
JBrowse link
G Kdf1 keratinocyte differentiation factor 1 located_in ISO (MGI:5529391|PMID:24075906) RGD PMID:24075906 MGI:5529391 NCBI chr 5:145,744,753...145,758,150
Ensembl chr 5:145,745,099...145,755,878
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member located_in ISS
ISO
GO_REF:0000024
(MGI:3771666|PMID:18057100), (MGI:3811945|PMID:18804437), (MGI:3844372|PMID:19376971), (MGI:6296386|PMID:25208553), (MGI:6716962|PMID:25936915)
UniProt
RGD
PMID:18057100 PMID:18804437 PMID:19376971 PMID:25208553 PMID:25936915 GO_REF:0000024 MGI:3771666 MGI:3811945 MGI:3844372 MGI:6296386 MGI:6716962 NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248
JBrowse link
G Lamc2 laminin subunit gamma 2 IDA RGD PMID:16409251 RGD:1581345 NCBI chr13:65,284,664...65,344,200
Ensembl chr13:65,284,664...65,344,200
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA RGD PMID:16272159 RGD:2298675 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 IDA RGD PMID:16272159 RGD:2298675 NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate located_in IEA
ISO
GO_REF:0000107
(MGI:3577812|PMID:15766745)
Ensembl
RGD
PMID:15766745 GO_REF:0000107 MGI:3577812 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
JBrowse link
G Melk maternal embryonic leucine zipper kinase located_in ISO (PMID:16159311) RGD PMID:16159311 NCBI chr 5:58,540,393...58,600,937
Ensembl chr 5:58,540,449...58,600,937
JBrowse link
G Mkln1 muskelin 1 located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1351271|PMID:9724633)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9724633 GO_REF:0000024 GO_REF:0000107 MGI:1351271 NCBI chr 4:59,815,912...60,124,047
Ensembl chr 4:60,002,464...60,123,993
JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:55,439,939...55,706,810
Ensembl chr17:55,442,696...55,706,748
JBrowse link
G Myh10 myosin heavy chain 10 located_in IEA
ISO
GO_REF:0000107
(MGI:1195842|PMID:8482409), (MGI:1289356|PMID:9725909)
(PMID:7699007)
Ensembl
RGD
PMID:7699007 PMID:8482409 PMID:9725909 GO_REF:0000107 MGI:1195842 MGI:1289356 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Myh9 myosin, heavy chain 9 located_in ISO
ISS
(MGI:1289356|PMID:9725909), (MGI:3664529|PMID:16895968), (MGI:6323780|PMID:31118423)
GO_REF:0000024
RGD
UniProt
PMID:9725909 PMID:16895968 PMID:31118423 GO_REF:0000024 MGI:1289356 MGI:3664529 MGI:6323780 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myl12a myosin light chain 12A located_in ISO (PMID:23870127) RGD PMID:23870127 NCBI chr 9:110,891,970...110,899,655
Ensembl chr 9:110,873,959...110,916,580
JBrowse link
G Myl12b myosin light chain 12B located_in ISO (PMID:23870127) RGD PMID:23870127 NCBI chr 9:110,873,855...110,888,187 JBrowse link
G Myl9 myosin light chain 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:145,281,943...145,288,333
Ensembl chr 3:145,281,937...145,288,333
JBrowse link
G Myo10 myosin X located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:76,100,962...76,304,164
Ensembl chr 2:76,100,987...76,303,030
JBrowse link
G Myo1d myosin ID located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:65,489,153...65,765,812
Ensembl chr10:65,489,154...65,766,349
JBrowse link
G Myo6 myosin VI located_in ISO (PMID:12857860) RGD PMID:12857860 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo9b myosin IXb located_in ISS
ISO
GO_REF:0000024
(PMID:8907710)
UniProt
RGD
PMID:8907710 GO_REF:0000024 NCBI chr16:17,945,379...18,030,114
Ensembl chr16:17,945,448...18,030,126
JBrowse link
G Ncl nucleolin located_in ISO
IEA
(PMID:16403913)
GO_REF:0000107
RGD
Ensembl
PMID:16403913 GO_REF:0000107 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 located_in ISO (MGI:3694584|PMID:17137798) RGD PMID:17137798 MGI:3694584 NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase located_in ISO
IEA
(PMID:9990509)
GO_REF:0000107
RGD
Ensembl
PMID:9990509 GO_REF:0000107 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 located_in ISO (MGI:3771666|PMID:18057100), (MGI:3811945|PMID:18804437), (MGI:3844372|PMID:19376971), (MGI:6296386|PMID:25208553), (MGI:6389592|PMID:31575650) RGD PMID:18057100 PMID:18804437 PMID:19376971 PMID:25208553 PMID:31575650 MGI:3771666 MGI:3811945 MGI:3844372 MGI:6296386 MGI:6389592 NCBI chr 1:67,778,037...67,810,946
Ensembl chr 1:67,777,948...68,023,736
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO (PMID:23783028), (PMID:23870127) RGD PMID:23783028 PMID:23870127 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
JBrowse link
G Olr1356 olfactory receptor 1356 located_in ISO (MGI:3640737|PMID:16805845) RGD PMID:16805845 MGI:3640737 NCBI chr10:11,682,890...11,683,828
Ensembl chr10:11,681,001...11,692,105
JBrowse link
G Ooep oocyte expressed protein located_in ISO (MGI:3775875|PMID:18191828), (MGI:3811945|PMID:18804437), (MGI:3844372|PMID:19376971), (MGI:6296386|PMID:25208553) RGD PMID:18191828 PMID:18804437 PMID:19376971 PMID:25208553 MGI:3775875 MGI:3811945 MGI:3844372 MGI:6296386 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in ISO (PMID:11940666) RGD PMID:11940666 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pard3 par-3 family cell polarity regulator located_in
is_active_in
ISO
IBA
(MGI:3577813|PMID:15766746)
PMID:21873635
RGD PMID:15766746 PMID:21873635 MGI:3577813, RGD:13792537 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Pard3b par-3 family cell polarity regulator beta is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:63,038,435...64,067,178
Ensembl chr 9:63,038,436...64,068,053
JBrowse link
G Pard6a par-6 family cell polarity regulator alpha located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:3039330|PMID:15028215)
Ensembl
RGD
PMID:15028215 PMID:21873635 GO_REF:0000107 MGI:3039330, RGD:13792537 NCBI chr19:33,589,583...33,591,900
Ensembl chr19:33,589,542...33,591,900
JBrowse link
G Pard6b par-6 family cell polarity regulator beta located_in
is_active_in
ISO
IBA
(MGI:3582101|PMID:15950600)
PMID:21873635
RGD PMID:15950600 PMID:21873635 MGI:3582101, RGD:13792537 NCBI chr 3:156,790,540...156,811,620
Ensembl chr 3:156,790,540...156,811,622
JBrowse link
G Pard6g par-6 family cell polarity regulator gamma is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:73,498,119...73,565,048
Ensembl chr18:73,498,021...73,565,029
JBrowse link
G Pfn1 profilin 1 located_in ISO (PMID:24700464) RGD PMID:24700464 NCBI chr10:55,365,263...55,367,968
Ensembl chr10:55,365,262...55,527,631
JBrowse link
G Pfn4 profilin family, member 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,786,619...27,796,710
Ensembl chr 6:27,786,619...27,796,710
JBrowse link
G Pla2g4c phospholipase A2 group IVC located_in ISO (MGI:3582100|PMID:15950603) RGD PMID:15950603 MGI:3582100 NCBI chr 1:74,249,688...74,272,133
Ensembl chr 1:74,236,211...74,274,656
JBrowse link
G Prkcz protein kinase C, zeta located_in ISO (MGI:3582101|PMID:15950600) RGD PMID:15950600 MGI:3582101 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Prkd1 protein kinase D1 located_in ISO (MGI:1861342|PMID:10882525) RGD PMID:10882525 MGI:1861342 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Psen1 presenilin 1 located_in
is_active_in
ISO
IBA
(MGI:2150214|PMID:11517342)
PMID:21873635
RGD PMID:11517342 PMID:21873635 MGI:2150214, RGD:13792537 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IDA RGD PMID:17127746 RGD:1642612 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Pxn paxillin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:41,060,791...41,107,962
Ensembl chr12:41,060,791...41,107,931
JBrowse link
G Rac1 Rac family small GTPase 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rac2 Rac family small GTPase 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:110,101,344...110,128,718
Ensembl chr 7:110,116,260...110,128,720
JBrowse link
G Rac3 Rac family small GTPase 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,002,808...106,005,244 JBrowse link
G Rai14 retinoic acid induced 14 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:59,546,284...59,682,687
Ensembl chr 2:59,546,284...59,681,971
JBrowse link
G RGD1304622 similar to 6820428L09 protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:67,388,916...67,427,392
Ensembl chr13:67,389,044...67,421,272
JBrowse link
G Rhoa ras homolog family member A located_in
is_active_in
ISO
IBA
ISS
(PMID:16103226)
PMID:21873635
GO_REF:0000024
(PMID:25485583)
RGD
UniProt
PMID:16103226 PMID:25485583 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhob ras homolog family member B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:31,363,752...31,365,926
Ensembl chr 6:31,363,548...31,366,108
JBrowse link
G Rhobtb1 Rho-related BTB domain containing 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:19,327,142...19,456,121
Ensembl chr20:19,327,155...19,403,012
JBrowse link
G Rhobtb2 Rho-related BTB domain containing 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:44,868,251...44,888,436
Ensembl chr15:44,870,376...44,888,651
JBrowse link
G Rhobtb3 Rho-related BTB domain containing 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:5,363,388...5,419,164
Ensembl chr 2:5,363,388...5,419,041
JBrowse link
G Rhoc ras homolog family member C is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
JBrowse link
G Rhod ras homolog family member D is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
JBrowse link
G Rhof ras homolog family member F, filopodia associated is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:33,422,375...33,446,689
Ensembl chr12:33,431,280...33,446,703
JBrowse link
G Rhog ras homolog family member G is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:156,618,713...156,630,710
Ensembl chr 1:156,615,349...156,631,257
JBrowse link
G Rhoh ras homolog family member H is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:42,341,135...42,371,971
Ensembl chr14:42,337,751...42,386,369
JBrowse link
G Ric8b RIC8 guanine nucleotide exchange factor B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:18,746,716...18,843,264
Ensembl chr 7:18,748,641...18,842,372
JBrowse link
G Rnd1 Rho family GTPase 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,821,311...129,828,385
Ensembl chr 7:129,821,311...129,828,399
JBrowse link
G Rnd2 Rho family GTPase 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:86,399,177...86,402,750
Ensembl chr10:86,399,148...86,402,742
JBrowse link
G Rnd3 Rho family GTPase 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:35,571,929...35,589,283
Ensembl chr 3:35,571,143...35,589,327
JBrowse link
G RSA-14-44 RSA-14-44 protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:95,251,657...95,253,029
Ensembl chr 4:95,251,610...95,253,088
JBrowse link
G Ryr1 ryanodine receptor 1 located_in ISO
IEA
(PMID:11206130)
GO_REF:0000107
RGD
Ensembl
PMID:11206130 GO_REF:0000107 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Septin5 septin 5 located_in ISO (MGI:1926701|PMID:11064363) RGD PMID:11064363 MGI:1926701 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
G Septin7 septin 7 located_in ISO (MGI:1926701|PMID:11064363) RGD PMID:11064363 MGI:1926701 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
JBrowse link
G Shroom2 shroom family member 2 located_in ISO (MGI:3723326|PMID:17666436) RGD PMID:17666436 MGI:3723326 NCBI chr  X:21,812,469...21,983,724
Ensembl chr  X:21,812,469...21,984,153
JBrowse link
G Snca synuclein alpha located_in ISO (PMID:19157893) RGD PMID:19157893 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Spink5 serine peptidase inhibitor, Kazal type 5 located_in ISO (PMID:12915442) RGD PMID:12915442 NCBI chr18:36,264,452...36,333,143
Ensembl chr18:36,264,452...36,332,185
JBrowse link
G Spire1 spire-type actin nucleation factor 1 located_in
is_active_in
ISO
IBA
(MGI:5305386|PMID:21983562)
PMID:21873635
RGD PMID:21983562 PMID:21873635 MGI:5305386, RGD:13792537 NCBI chr18:61,041,290...61,171,670
Ensembl chr18:61,041,290...61,171,899
JBrowse link
G Spire2 spire-type actin nucleation factor 2 located_in
is_active_in
ISO
IBA
(MGI:5305386|PMID:21983562)
PMID:21873635
RGD PMID:21983562 PMID:21873635 MGI:5305386, RGD:13792537 NCBI chr19:51,373,368...51,411,920
Ensembl chr19:51,373,228...51,411,920
JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:13,241,164...13,306,047
Ensembl chr 3:13,241,217...13,306,046
JBrowse link
G Stox1 storkhead box 1 located_in ISO (MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:5635320 NCBI chr20:30,598,656...30,666,371
Ensembl chr20:30,598,168...30,666,939
JBrowse link
G Tcl1a Tcl1 family Akt coactivator A located_in ISO (MGI:2386473|PMID:12181493) RGD PMID:12181493 MGI:2386473 NCBI chr 6:124,125,032...124,131,025
Ensembl chr 6:124,125,032...124,131,025
JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member located_in ISO (MGI:3811945|PMID:18804437), (MGI:3844372|PMID:19376971), (MGI:6296386|PMID:25208553) RGD PMID:18804437 PMID:19376971 PMID:25208553 MGI:3811945 MGI:3844372 MGI:6296386 NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639
JBrowse link
G Traf2 Tnf receptor-associated factor 2 IDA RGD PMID:12786973 RGD:2298728 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
G Traf6 TNF receptor associated factor 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trip10 thyroid hormone receptor interactor 10 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
JBrowse link
G Tsc1 TSC complex subunit 1 located_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Usp2 ubiquitin specific peptidase 2 located_in ISO (MGI:3624565|PMID:14686789) RGD PMID:14686789 MGI:3624565 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector colocalizes_with ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
actin cap term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 located_in ISO (MGI:5006872|PMID:21494665), (MGI:5293241|PMID:21874009) RGD PMID:21494665 PMID:21874009 MGI:5006872 MGI:5293241 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
JBrowse link
G Cald1 caldesmon 1 located_in ISO (MGI:3036595|PMID:2909534) RGD PMID:2909534 MGI:3036595 NCBI chr 4:63,265,781...63,446,936
Ensembl chr 4:63,265,942...63,446,932
JBrowse link
G Gsn gelsolin located_in ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Wasl WASP like actin nucleation promoting factor located_in IEA
ISO
GO_REF:0000107
(MGI:5293241|PMID:21874009)
Ensembl
RGD
PMID:21874009 GO_REF:0000107 MGI:5293241 NCBI chr 4:53,083,536...53,132,061
Ensembl chr 4:53,083,536...53,132,022
JBrowse link
actomyosin contractile ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin, actin binding protein is_active_in
located_in
IBA
ISO
PMID:21873635
(PMID:10931866)
RGD PMID:10931866 PMID:21873635 RGD:13792537 NCBI chr 8:20,858,227...20,921,602
Ensembl chr 8:20,858,228...20,921,538
JBrowse link
G Anlnl1 anillin, actin binding protein-like 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr17:57,985,340...57,995,824
Ensembl chr17:57,986,511...57,989,997
JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase located_in ISO (PMID:16510120) RGD PMID:16510120 NCBI chr14:77,357,261...77,390,683
Ensembl chr14:77,357,264...77,390,671
JBrowse link
G Myh2 myosin heavy chain 2 located_in ISO (MGI:3575233|PMID:15548599) RGD PMID:15548599 MGI:3575233 NCBI chr10:51,856,738...51,883,236
Ensembl chr10:51,856,738...51,883,236
JBrowse link
G Myh9 myosin, heavy chain 9 located_in ISO
ISS
(PMID:11029059)
GO_REF:0000024
RGD
UniProt
PMID:11029059 GO_REF:0000024 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Pstpip1 proline-serine-threonine phosphatase-interacting protein 1 located_in ISO (MGI:1335001|PMID:9265651) RGD PMID:9265651 MGI:1335001 NCBI chr 8:56,499,287...56,538,593
Ensembl chr 8:56,499,590...56,538,580
JBrowse link
G Rtkn rhotekin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:115,640,801...115,657,952
Ensembl chr 4:115,640,774...115,657,952
JBrowse link
apical cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07050543.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07053509.2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 3:107,013,265...107,054,324 JBrowse link
G Fabp1 fatty acid binding protein 1 IDA intestinal epithelial cells of fasted rats RGD PMID:10666570 RGD:1582399 NCBI chr 4:103,191,015...103,194,791
Ensembl chr 4:103,191,006...103,194,788
JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:211,040,032...211,044,089
JBrowse link
G Hamp hepcidin antimicrobial peptide IDA RGD PMID:15684344 RGD:1599359 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Insc INSC, spindle orientation adaptor protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:168,993,032...169,100,438
Ensembl chr 1:168,993,032...169,100,433
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member located_in
is_active_in
ISO
IBA
(MGI:3771666|PMID:18057100)
PMID:21873635
RGD PMID:18057100 PMID:21873635 MGI:3771666, RGD:13792537 NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248
JBrowse link
G Myo5b myosin Vb located_in ISO
ISS
(PMID:21206382)
GO_REF:0000024
RGD
UniProt
PMID:21206382 GO_REF:0000024 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 located_in ISO (MGI:3771666|PMID:18057100) RGD PMID:18057100 MGI:3771666 NCBI chr 1:67,778,037...67,810,946
Ensembl chr 1:67,777,948...68,023,736
JBrowse link
G Prkcz protein kinase C, zeta located_in ISO (MGI:3582101|PMID:15950600) RGD PMID:15950600 MGI:3582101 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Sapcd2 suppressor APC domain containing 2 located_in ISO (PMID:26766442)
(MGI:5882149|PMID:26766442)
RGD PMID:26766442 MGI:5882149 NCBI chr 3:8,186,089...8,195,119
Ensembl chr 3:8,187,266...8,192,546
JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO (MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:3821785 NCBI chr 3:107,013,783...107,054,878 JBrowse link
G Tchp trichoplein, keratin filament binding located_in ISO (PMID:15731013) RGD PMID:15731013 NCBI chr12:41,877,888...41,893,264
Ensembl chr12:41,877,889...41,892,427
JBrowse link
basal cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Gck glucokinase IDA preferentially localized in regions closest to blood vessels in pancreatic beta cells of fed, not fasted, rats RGD PMID:10071239 RGD:2301948 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995
JBrowse link
G Mark2 microtubule affinity regulating kinase 2 located_in ISO (MGI:3582101|PMID:15950600) RGD PMID:15950600 MGI:3582101 NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 located_in
is_active_in
ISO
IEA
IBA
(PMID:23940118)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:23940118 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:45,003,538...45,051,541
Ensembl chr 8:45,003,538...45,051,522
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:10770959)
(MGI:4942265|PMID:10770959)
RGD PMID:10770959 MGI:4942265 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
cortical actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 colocalizes_with IDA RGD PMID:15505042 RGD:1359754 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Actn2 actinin alpha 2 colocalizes_with IDA RGD PMID:15505042 RGD:1359754 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Akap13 A-kinase anchoring protein 13 colocalizes_with ISO
ISS
(PMID:11546812)
GO_REF:0000024
RGD
UniProt
PMID:11546812 GO_REF:0000024 NCBI chr 1:129,313,183...129,619,647
Ensembl chr 1:129,314,402...129,619,646
JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 located_in ISO (MGI:3047055|PMID:15004221) RGD PMID:15004221 MGI:3047055 NCBI chr 5:135,142,108...135,168,885
Ensembl chr 5:135,142,112...135,168,769
JBrowse link
G Cdc45 cell division cycle 45 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
JBrowse link
G Cdh1 cadherin 1 colocalizes_with ISO (PMID:24046456) RGD PMID:24046456 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdh2 cadherin 2 colocalizes_with
located_in
ISO
IEA
(PMID:24046456)
GO_REF:0000107
RGD
Ensembl
PMID:24046456 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cfl1 cofilin 1 located_in ISO (MGI:3047055|PMID:15004221), (MGI:3575233|PMID:15548599) RGD PMID:15004221 PMID:15548599 MGI:3047055 MGI:3575233 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Cldn5 claudin 5 colocalizes_with ISO (PMID:25816133) RGD PMID:25816133 NCBI chr11:82,212,822...82,214,248 JBrowse link
G Coro1a coronin 1A colocalizes_with
located_in
ISO (PMID:24760828)
(PMID:15800061)
RGD PMID:15800061 PMID:24760828 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Cotl1 coactosin-like F-actin binding protein 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:47,871,689...47,906,010
Ensembl chr19:47,871,694...47,911,689
JBrowse link
G Cttn cortactin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Dbn1 drebrin 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dbnl drebrin-like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein located_in IEA
ISO
GO_REF:0000107
(PMID:19158340)
Ensembl
RGD
PMID:19158340 GO_REF:0000107 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
JBrowse link
G Dmd dystrophin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Dstn destrin, actin depolymerizing factor located_in ISO (MGI:3575233|PMID:15548599) RGD PMID:15548599 MGI:3575233 NCBI chr 3:131,284,647...131,311,361
Ensembl chr 3:131,284,648...131,311,379
JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 located_in ISO (PMID:19158340) RGD PMID:19158340 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839
JBrowse link
G Flot1 flotillin 1 colocalizes_with ISO (PMID:24046456) RGD PMID:24046456 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Flot2 flotillin 2 colocalizes_with ISO (PMID:24046456) RGD PMID:24046456 NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756
JBrowse link
G Gsn gelsolin colocalizes_with
located_in
ISO (PMID:23575248)
(PMID:24236012)
RGD PMID:23575248 PMID:24236012 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Gys2 glycogen synthase 2 located_in IDA PMID:9003423 UniProt PMID:9003423 RGD:8553883 NCBI chr 4:175,365,054...175,406,228
Ensembl chr 4:175,365,054...175,406,228
JBrowse link
G Hcls1 hematopoietic cell specific Lyn substrate 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 located_in ISO PR:P46940 (MGI:5907777|PMID:28089576) RGD PMID:28089576 MGI:5907777 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Lancl2 LanC like 2 located_in ISO (PMID:16979580) RGD PMID:16979580 NCBI chr 4:87,441,821...87,483,707
Ensembl chr 4:87,441,823...87,482,800
JBrowse link
G Lasp1 LIM and SH3 protein 1 located_in IDA PMID:10806114 UniProt PMID:10806114 RGD:8553950 NCBI chr10:82,795,177...82,835,659
Ensembl chr10:82,795,137...82,943,292
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 located_in
is_active_in
ISO
IBA
IEA
(PMID:7542763)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:7542763 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:45,379,423...45,394,096
Ensembl chr10:45,379,515...45,394,094
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525
JBrowse link
G Med28 mediator complex subunit 28 located_in ISO (MGI:3513729|PMID:15467741) RGD PMID:15467741 MGI:3513729 NCBI chr14:65,594,785...65,603,583
Ensembl chr14:65,594,647...65,603,583
JBrowse link
G Misp mitotic spindle positioning colocalizes_with ISO (PMID:23509069) RGD PMID:23509069 NCBI chr 7:9,870,390...9,886,541
Ensembl chr 7:9,870,444...9,886,541
JBrowse link
G Mlph melanophilin located_in
is_active_in
ISO
IBA
(MGI:3611941|PMID:16247022)
PMID:21873635
RGD PMID:16247022 PMID:21873635 MGI:3611941, RGD:13792537 NCBI chr 9:91,507,410...91,542,984
Ensembl chr 9:91,507,591...91,542,983
JBrowse link
G Mobp myelin-associated oligodendrocyte basic protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:119,869,504...119,899,605
Ensembl chr 8:119,869,626...119,899,563
JBrowse link
G Mtss2 MTSS I-BAR domain containing 2 located_in ISO (MGI:3810204|PMID:18413296) RGD PMID:18413296 MGI:3810204 NCBI chr19:38,692,793...38,714,575
Ensembl chr19:38,693,194...38,713,507
JBrowse link
G Myadm myeloid-associated differentiation marker located_in ISO
IEA
(PMID:21325632), (PMID:23264465)
GO_REF:0000107
RGD
Ensembl
PMID:21325632 PMID:23264465 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
JBrowse link
G Myo1a myosin IA located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8692943)
UniProt
Ensembl
RGD
PMID:8692943 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:63,542,988...63,557,944
JBrowse link
G Myo1f myosin IF located_in ISO (MGI:3664353|PMID:17023661) RGD PMID:17023661 MGI:3664353 NCBI chr 7:14,363,340...14,413,911
Ensembl chr 7:14,363,350...14,413,911
JBrowse link
G Myrip myosin VIIA and Rab interacting protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:120,017,843...120,184,821
Ensembl chr 8:120,017,524...120,183,833
JBrowse link
G Myzap myocardial zonula adherens protein colocalizes_with ISS
ISO
GO_REF:0000024
(MGI:4947500|PMID:20093627)
UniProt
RGD
PMID:20093627 GO_REF:0000024 MGI:4947500 NCBI chr 8:72,155,817...72,243,036 JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor located_in IEA
ISO
GO_REF:0000107
(MGI:3513729|PMID:15467741)
Ensembl
RGD
PMID:15467741 GO_REF:0000107 MGI:3513729 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
JBrowse link
G Pdlim2 PDZ and LIM domain 2 colocalizes_with IDA RGD PMID:15505042 RGD:1359754 NCBI chr15:45,235,421...45,250,187
Ensembl chr15:45,237,477...45,249,242
JBrowse link
G Pjvk pejvakin located_in ISO (MGI:5907777|PMID:28089576) RGD PMID:28089576 MGI:5907777 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
G Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 located_in ISO (MGI:5487756|PMID:22832517) RGD PMID:22832517 MGI:5487756 NCBI chr 6:10,032,837...10,132,081
Ensembl chr 6:10,032,660...10,140,794
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A located_in ISO (MGI:3583726|PMID:15996550) RGD PMID:15996550 MGI:3583726 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B located_in ISO (MGI:3583726|PMID:15996550) RGD PMID:15996550 MGI:3583726 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 colocalizes_with
located_in
IDA
IEA
ISO
PMID:21047789
GO_REF:0000107
(PMID:21047789)
Ensembl
RGD
PMID:21047789 PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rdx radixin located_in ISO (MGI:5645204|PMID:21047789) RGD PMID:21047789 MGI:5645204 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha IDA RGD PMID:16356937 RGD:1624121 NCBI chr 4:158,122,962...158,146,184
Ensembl chr 4:158,122,962...158,146,181
JBrowse link
G Shroom1 shroom family member 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,621,149...37,631,895
Ensembl chr10:37,621,723...37,631,256
JBrowse link
G Shroom2 shroom family member 2 colocalizes_with
is_active_in
located_in
ISO
IBA
IEA
(PMID:16684770)
PMID:21873635
GO_REF:0000107
(MGI:3690292|PMID:16684770)
RGD
Ensembl
PMID:16684770 PMID:21873635 GO_REF:0000107 MGI:3690292, RGD:13792537 NCBI chr  X:21,812,469...21,983,724
Ensembl chr  X:21,812,469...21,984,153
JBrowse link
G Shroom3 shroom family member 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,099,415...15,396,832
Ensembl chr14:15,099,423...15,396,915
JBrowse link
G Shroom4 shroom family member 4 colocalizes_with
is_active_in
ISO
IBA
(MGI:3690292|PMID:16684770)
PMID:21873635
RGD PMID:16684770 PMID:21873635 MGI:3690292, RGD:13792537 NCBI chr  X:15,869,065...16,076,850
Ensembl chr  X:15,869,065...16,076,869
JBrowse link
G Slc2a1 solute carrier family 2 member 1 located_in ISS
ISO
GO_REF:0000024
(PMID:18347014)
UniProt
RGD
PMID:18347014 GO_REF:0000024 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:86,203,504...86,279,371
Ensembl chr13:86,203,504...86,279,371
JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:13,241,164...13,306,047
Ensembl chr 3:13,241,217...13,306,046
JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:103,842,684...104,008,507
Ensembl chr14:103,842,684...104,008,507
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 located_in IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
JBrowse link
G Utrn utrophin is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10760950 PMID:21873635 RGD:1580541, RGD:13792537 NCBI chr 1:6,720,854...7,224,313
Ensembl chr 1:6,722,594...7,224,313
JBrowse link
G Wdr1 WD repeat domain 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:72,258,032...72,291,768
Ensembl chr14:72,257,956...72,291,766
JBrowse link
cortical cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta located_in IEA
ISO
GO_REF:0000107
(MGI:3806792|PMID:18723693)
Ensembl
RGD
PMID:18723693 GO_REF:0000107 MGI:3806792 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actn4 actinin alpha 4 located_in ISO (MGI:2674212|PMID:12960352) RGD PMID:12960352 MGI:2674212 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Ank1 ankyrin 1 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr16:68,876,294...69,054,812
Ensembl chr16:68,877,504...69,054,759
JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr 2:192,319,696...192,364,755
Ensembl chr 2:192,319,702...192,364,480
JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr 4:45,978,142...46,014,032
Ensembl chr 4:45,977,807...46,013,864
JBrowse link
G Capza3 capping actin protein of muscle Z-line subunit alpha 3 located_in IEA
ISO
GO_REF:0000107
(MGI:3806792|PMID:18723693)
Ensembl
RGD
PMID:18723693 GO_REF:0000107 MGI:3806792 NCBI chr 4:172,929,273...172,930,486
Ensembl chr 4:172,928,887...172,932,535
JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta located_in IEA
ISO
GO_REF:0000107
(MGI:3806792|PMID:18723693)
Ensembl
RGD
PMID:18723693 GO_REF:0000107 MGI:3806792 NCBI chr 5:151,435,600...151,535,409
Ensembl chr 5:151,434,871...151,535,409
JBrowse link
G Cttn cortactin located_in ISS
ISO
GO_REF:0000024
(PMID:12151401)
UniProt
RGD
PMID:12151401 GO_REF:0000024 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in ISO
IEA
(PMID:12151521)
GO_REF:0000107
RGD
Ensembl
PMID:12151521 GO_REF:0000107 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dmtn dematin actin binding protein located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 located_in ISO (PMID:16254212)
(MGI:3806792|PMID:18723693)
RGD PMID:16254212 PMID:18723693 MGI:3806792 NCBI chr 5:144,110,010...144,264,037
Ensembl chr 5:144,111,906...144,237,821
JBrowse link
G Epb42 erythrocyte membrane protein band 4.2 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr 3:107,979,709...107,997,932
Ensembl chr 3:107,979,713...107,997,932
JBrowse link
G Flna filamin A IDA RGD PMID:15661894 RGD:2312435 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Gypc glycophorin C (Gerbich blood group) located_in
is_active_in
ISO
IBA
(PMID:16669616)
PMID:21873635
(MGI:3806792|PMID:18723693)
RGD PMID:16669616 PMID:18723693 PMID:21873635 MGI:3806792, RGD:13792537 NCBI chr18:24,160,738...24,193,408
Ensembl chr18:24,160,739...24,193,204
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IDA RGD PMID:15661894 RGD:2312435 NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
JBrowse link
G Mpp1 MAGUK p55 scaffold protein 1 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792
G Myh9 myosin, heavy chain 9 located_in ISO
IEA
(MGI:3052228|PMID:12893741)
GO_REF:0000107
RGD
Ensembl
PMID:12893741 GO_REF:0000107 MGI:3052228 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Nos2 nitric oxide synthase 2 located_in IEA
ISO
GO_REF:0000107
(MGI:2674212|PMID:12960352)
Ensembl
RGD
PMID:12960352 GO_REF:0000107 MGI:2674212 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor located_in IDA PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chr 3:7,861,846...7,870,615
Ensembl chr 3:7,861,872...7,870,614
JBrowse link
G Sele selectin E located_in IEA
ISO
GO_REF:0000107
(PMID:8609175)
Ensembl
RGD
PMID:8609175 GO_REF:0000107 NCBI chr13:76,402,841...76,412,741
Ensembl chr13:76,403,304...76,412,741
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3806792|PMID:18723693)
GO_REF:0000024
(PMID:16669616)
Ensembl
RGD
UniProt
PMID:16669616 PMID:18723693 GO_REF:0000024 GO_REF:0000107 MGI:3806792 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117
JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr13:86,203,504...86,279,371
Ensembl chr13:86,203,504...86,279,371
JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr 3:13,241,164...13,306,047
Ensembl chr 3:13,241,217...13,306,046
JBrowse link
G Sptb spectrin, beta, erythrocytic located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr 6:95,310,342...95,437,221
Ensembl chr 6:95,310,326...95,437,118
JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 located_in ISO (MGI:3806792|PMID:18723693) RGD PMID:18723693 MGI:3806792 NCBI chr14:103,842,684...104,008,507
Ensembl chr14:103,842,684...104,008,507
JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO (MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:3821785 NCBI chr 3:107,013,783...107,054,878 JBrowse link
G Tmod1 tropomodulin 1 located_in IEA
ISO
GO_REF:0000107
(MGI:3806792|PMID:18723693)
Ensembl
RGD
PMID:18723693 GO_REF:0000107 MGI:3806792 NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956
JBrowse link
G Tpm3 tropomyosin 3 located_in ISO (MGI:1196796|PMID:9473354), (MGI:3688320|PMID:16765662) RGD PMID:9473354 PMID:16765662 MGI:1196796 MGI:3688320 NCBI chr 2:175,517,198...175,545,014
Ensembl chr 2:175,517,226...175,545,013
JBrowse link
G Tpm4 tropomyosin 4 located_in ISO (MGI:3688320|PMID:16765662) RGD PMID:16765662 MGI:3688320 NCBI chr16:17,684,415...17,698,456
Ensembl chr16:17,683,195...17,705,984
JBrowse link
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 located_in ISO
IEA
(PMID:16254212)
GO_REF:0000107
RGD
Ensembl
PMID:16254212 GO_REF:0000107 NCBI chr 2:138,307,676...138,476,856
Ensembl chr 2:138,308,084...138,476,768
JBrowse link
cortical endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arv1 ARV1 homolog, fatty acid homeostasis modulator is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:52,692,337...52,704,156
Ensembl chr19:52,692,337...52,704,156
JBrowse link
G Asph aspartate-beta-hydroxylase located_in ISO (PMID:22586105)
(PMID:21062895)
RGD PMID:21062895 PMID:22586105 NCBI chr 5:22,603,879...22,814,107
Ensembl chr 5:22,603,486...22,813,876
JBrowse link
G C2cd2l C2CD2-like located_in ISO (PMID:28209843) RGD PMID:28209843 NCBI chr 8:44,648,074...44,658,856
Ensembl chr 8:44,648,079...44,658,340
JBrowse link
G Emd emerin colocalizes_with
located_in
ISO
IEA
(PMID:19494128)
GO_REF:0000107
RGD
Ensembl
PMID:19494128 GO_REF:0000107 NCBI chr  X:152,038,990...152,042,190
Ensembl chr  X:152,038,998...152,045,807
JBrowse link
G Osbpl8 oxysterol binding protein-like 8 located_in ISO (PMID:26206935) RGD PMID:26206935 NCBI chr 7:46,596,944...46,749,888
Ensembl chr 7:46,596,983...46,749,888
JBrowse link
G Stim1 stromal interaction molecule 1 located_in ISO (PMID:22586105) RGD PMID:22586105 NCBI chr 1:156,656,246...156,818,777
Ensembl chr 1:156,656,013...156,818,363
JBrowse link
G Stimate STIM activating enhancer located_in
is_active_in
ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:6,013,392...6,070,829
Ensembl chr16:6,013,369...6,071,816
JBrowse link
G Tmem201 transmembrane protein 201 colocalizes_with ISO (PMID:19494128) RGD PMID:19494128 NCBI chr 5:160,166,240...160,188,874
Ensembl chr 5:160,166,427...160,188,843
JBrowse link
cortical microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO (PMID:26765568) RGD PMID:26765568 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
JBrowse link
cortical microtubule cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 located_in ISO (PMID:12837247) RGD PMID:12837247 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 located_in ISO (PMID:15631994) RGD PMID:15631994 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983
JBrowse link
cortical microtubule plus-end term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp2 cytoplasmic linker associated protein 2 located_in ISO (PMID:24520051) RGD PMID:24520051 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Pde4dip phosphodiesterase 4D interacting protein colocalizes_with ISO (PMID:29162697) RGD PMID:29162697 NCBI chr 2:185,293,236...185,490,100
Ensembl chr 2:185,293,214...185,468,379
JBrowse link
cuticular plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 IDA RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Calb2 calbindin 2 IDA RGD PMID:16120789 RGD:7175527 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438
JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO
ISS
(PMID:26426422)
GO_REF:0000024
RGD
UniProt
PMID:26426422 GO_REF:0000024 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Fchsd1 FCH and double SH3 domains 1 colocalizes_with ISO (MGI:6233193|PMID:23437151) RGD PMID:23437151 MGI:6233193 NCBI chr18:29,793,899...29,804,533
Ensembl chr18:29,793,899...29,804,466
JBrowse link
G Kncn kinocilin located_in
is_active_in
ISO
IBA
(MGI:3576794|PMID:15855039)
PMID:21873635
RGD PMID:15855039 PMID:21873635 MGI:3576794, RGD:13792537 NCBI chr 5:129,362,483...129,365,964
Ensembl chr 5:129,363,785...129,366,738
JBrowse link
G Myo1e myosin IE IDA RGD PMID:12486594 RGD:1298992 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:109,772,939...109,787,954
Ensembl chr 7:109,772,593...109,784,561
JBrowse link
G Snx9 sorting nexin 9 colocalizes_with ISO (MGI:6233193|PMID:23437151) RGD PMID:23437151 MGI:6233193 NCBI chr 1:46,424,897...46,510,096
Ensembl chr 1:46,423,553...46,509,036
JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 located_in ISO (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr13:86,203,504...86,279,371
Ensembl chr13:86,203,504...86,279,371
JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 located_in ISO (MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:3821785 NCBI chr 3:13,241,164...13,306,047
Ensembl chr 3:13,241,217...13,306,046
JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 located_in ISO (MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:3821785 NCBI chr14:103,842,684...104,008,507
Ensembl chr14:103,842,684...104,008,507
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) is_active_in
located_in
IDA
IBA
PMID:21873635
PMID:9679147
RGD
GO_Central
SynGO-UCL
PMID:11596050 PMID:21873635 PMID:9679147 RGD:9850129, RGD:13792537, RGD:69780 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11596050 PMID:21873635 RGD:9850129, RGD:13792537 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
exocyst term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc1 exocyst complex component 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:31,611,536...31,659,920
Ensembl chr14:31,611,547...31,659,914
JBrowse link
G Exoc1l exocyst complex component 1 like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:31,673,442...31,698,605
Ensembl chr14:31,673,636...31,698,001
JBrowse link
G Exoc2 exocyst complex component 2 part_of IDA
ISO
IEA
IBA
(PMID:24056301)
GO_REF:0000104
PMID:21873635
RGD
UniProt
PMID:24056301 PMID:9405631 PMID:21873635 GO_REF:0000104, RGD:69988, RGD:13792537 NCBI chr17:33,506,289...33,698,246
Ensembl chr17:33,506,338...33,693,289
JBrowse link
G Exoc3 exocyst complex component 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:29,091,298...29,122,056
Ensembl chr 1:29,091,294...29,122,045
JBrowse link
G Exoc3l1 exocyst complex component 3-like 1 part_of IBA
ISO
PMID:21873635
(MGI:3852302|PMID:18480549)
RGD PMID:18480549 PMID:21873635 MGI:3852302, RGD:13792537 NCBI chr19:33,166,836...33,174,371
Ensembl chr19:33,166,837...33,172,486
JBrowse link
G Exoc3l2 exocyst complex component 3-like 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:79,113,784...79,145,359
Ensembl chr 1:79,112,506...79,145,465
JBrowse link
G Exoc3l4 exocyst complex component 3-like 4 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:130,452,680...130,466,684
Ensembl chr 6:130,452,661...130,466,683
JBrowse link
G Exoc4 exocyst complex component 4 part_of IBA
TAS
IEA
PMID:21873635
PMID:12738960
GO_REF:0000104
UniProt PMID:21873635 PMID:12738960 GO_REF:0000104, RGD:13792537, RGD:8554028 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Exoc5 exocyst complex component 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:22,310,682...22,355,695
Ensembl chr15:22,308,946...22,355,335
JBrowse link
G Exoc6 exocyst complex component 6 part_of IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 1:235,314,612...235,457,824
Ensembl chr 1:235,300,369...235,457,015
JBrowse link
G Exoc6b exocyst complex component 6B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:117,094,741...117,550,221
Ensembl chr 4:117,094,741...117,550,180
JBrowse link
G Exoc7 exocyst complex component 7 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:101,521,640...101,563,123
Ensembl chr10:101,520,927...101,540,561
JBrowse link
G Exoc8 exocyst complex component 8 part_of IDA
IBA
ISO
PMID:21873635
(PMID:24056301)
RGD PMID:24056301 PMID:9405631 PMID:21873635 RGD:69988, RGD:13792537 NCBI chr19:52,855,010...52,857,499
Ensembl chr19:52,852,578...52,857,491
JBrowse link
G Myrip myosin VIIA and Rab interacting protein part_of IEA
ISO
GO_REF:0000107
(MGI:3762420|PMID:17827149)
Ensembl
RGD
PMID:17827149 GO_REF:0000107 MGI:3762420 NCBI chr 8:120,017,843...120,184,821
Ensembl chr 8:120,017,524...120,183,833
JBrowse link
G Rab10 RAB10, member RAS oncogene family colocalizes_with ISS
ISO
GO_REF:0000024
(PMID:20576682)
UniProt
RGD
PMID:20576682 GO_REF:0000024 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Septin2 septin 2 IDA RGD PMID:12544826 RGD:724634 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 colocalizes_with ISO
ISS
(PMID:21658605)
GO_REF:0000024
RGD
UniProt
PMID:21658605 GO_REF:0000024 NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201
JBrowse link
G Stxbp6 syntaxin binding protein 6 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:61,920,756...62,157,405
Ensembl chr 6:61,920,756...62,158,024
JBrowse link
G Tnfaip2 TNF alpha induced protein 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:130,476,832...130,489,914
Ensembl chr 6:130,476,889...130,489,914
JBrowse link
G Washc1 WASH complex subunit 1 colocalizes_with ISO (PMID:24344185) RGD PMID:24344185 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
lateral cell cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpsm2 G-protein signaling modulator 2 located_in ISO (PMID:26766442)
(MGI:5882149|PMID:26766442)
RGD PMID:26766442 MGI:5882149 NCBI chr 2:196,327,149...196,375,322
Ensembl chr 2:196,327,149...196,375,154
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO (MGI:5882149|PMID:26766442) RGD PMID:26766442 MGI:5882149 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
JBrowse link
postsynaptic endocytic zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A located_in
is_active_in
ISO
IBA
(MGI:5819350|PMID:17880892)
PMID:21873635
RGD PMID:17880892 PMID:21873635 MGI:5819350, RGD:13792537 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
presynaptic active zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) located_in
is_active_in
part_of
IEA
IDA
ISO
GO_REF:0000107
PMID:9679147
PMID:10340516
(MGI:5816444|PMID:21144999)
Ensembl
RGD
PMID:21144999 PMID:9679147 PMID:9679147 PMID:10340516 PMID:10340516 GO_REF:0000107 MGI:5816444, RGD:69780, RGD:69780, RGD:13702152, RGD:13702152 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Ctbp1 C-terminal binding protein 1 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:6189269|PMID:22745816)
Ensembl
RGD
PMID:22745816 GO_REF:0000107 MGI:6189269 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Ctbp2 C-terminal binding protein 2 is_active_in ISO (MGI:6189269|PMID:22745816) RGD PMID:22745816 MGI:6189269 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (MGI:83903|PMID:8909549) RGD PMID:8909549 MGI:83903 NCBI chr 4:109,293,978...110,443,413
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Ctnnb1 catenin beta 1 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:83903|PMID:8909549)
Ensembl
RGD
PMID:8909549 GO_REF:0000107 MGI:83903 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctnnd1 catenin delta 1 part_of
is_active_in
IDA PMID:12727444 SynGO PMID:12727444 PMID:12727444 RGD:2316208, RGD:2316208 NCBI chr 3:69,683,328...69,734,550
Ensembl chr 3:69,683,313...69,734,516
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 part_of
is_active_in
IDA PMID:12391317 SynGO PMID:12391317 PMID:12391317 RGD:632516, RGD:632516 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 part_of
is_active_in
IDA
ISO
PMID:12391317
(MGI:6120581|PMID:29439199)
RGD PMID:29439199 PMID:12391317 PMID:12391317 MGI:6120581, RGD:632516, RGD:632516 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776
JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 is_active_in
part_of
IDA PMID:12388603 SynGO PMID:12388603 PMID:12388603 RGD:12050093, RGD:12050093 NCBI chr 2:167,348,824...167,398,983
Ensembl chr 2:167,348,825...167,398,916
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 is_active_in ISO (MGI:6189645|PMID:19811534) RGD PMID:19811534 MGI:6189645 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 part_of
is_active_in
IDA PMID:21179518 SynGO PMID:21179518 PMID:21179518 RGD:4892203, RGD:4892203 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) located_in
is_active_in
part_of
ISO
IDA
(MGI:5816444|PMID:21144999)
PMID:21712437
RGD PMID:21144999 PMID:21712437 PMID:21712437 MGI:5816444, RGD:9850098, RGD:9850098 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:6120581|PMID:29439199)
Ensembl
RGD
PMID:29439199 GO_REF:0000107 MGI:6120581 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798
JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in ISO (MGI:5822951|PMID:27671655) RGD PMID:27671655 MGI:5822951 NCBI chr12:27,747,615...27,946,256
Ensembl chr12:27,747,980...27,956,763
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in
located_in
part_of
IDA
ISO
PMID:9252191
(MGI:5816444|PMID:21144999)
(MGI:6189473|PMID:27537483)
PMID:27462810
RGD PMID:21144999 PMID:27537483 PMID:9252191 PMID:27462810 PMID:9252191 More... MGI:5816444 MGI:6189473, RGD:633897, RGD:13702367, RGD:633897, RGD:13702367 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in
part_of
IDA PMID:9252191 SynGO PMID:9252191 PMID:9252191 RGD:633897, RGD:633897 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Unc13a unc-13 homolog A located_in
is_active_in
IDA
IBA
PMID:21712437
PMID:21873635
SynGO
GO_Central
PMID:21712437 PMID:21873635 RGD:9850098, RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
septin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042936.2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07042937.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043247.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043248.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043249.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043287.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043288.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Septin1 septin 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,832,700...181,836,566
Ensembl chr 1:181,832,701...181,836,566
JBrowse link
G Septin10 septin 10 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:27,101,764...27,194,997
Ensembl chr20:27,101,752...27,194,780
JBrowse link
G Septin11 septin 11 part_of IBA
ISO
ISS
PMID:21873635
(MGI:3822234|PMID:18809578)
GO_REF:0000024
(PMID:15485874)
RGD
UniProt
PMID:15485874 PMID:18809578 PMID:21873635 GO_REF:0000024 MGI:3822234, RGD:13792537 NCBI chr14:14,844,759...14,990,856
Ensembl chr14:14,844,580...14,990,853
JBrowse link
G Septin12 septin 12 part_of ISO
IBA
(PMID:25588830)
PMID:21873635
RGD PMID:25588830 PMID:21873635 RGD:13792537 NCBI chr10:10,580,900...10,590,582
Ensembl chr10:10,581,008...10,590,581
JBrowse link
G Septin14 septin 14 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:26,975,283...27,005,588
Ensembl chr12:26,975,344...26,998,299
JBrowse link
G Septin2 septin 2 part_of IBA
ISO
PMID:21873635
(MGI:3822234|PMID:18809578)
(PMID:23572511), (PMID:25588830)
RGD PMID:18809578 PMID:23572511 PMID:25588830 PMID:21873635 MGI:3822234, RGD:13792537 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
JBrowse link
G Septin3 septin 3 part_of ISS
ISO
IBA
GO_REF:0000024
(MGI:3822234|PMID:18809578)
PMID:21873635
UniProt
RGD
PMID:18809578 PMID:21873635 GO_REF:0000024 MGI:3822234, RGD:13792537 NCBI chr 7:113,783,217...113,811,089
Ensembl chr 7:113,783,095...113,811,087
JBrowse link
G Septin4 septin 4 part_of IBA
ISO
PMID:21873635
(MGI:3822234|PMID:18809578)
(PMID:17105210), (PMID:25588830)
RGD PMID:17105210 PMID:18809578 PMID:25588830 PMID:21873635 MGI:3822234, RGD:13792537 NCBI chr10:72,366,729...72,390,764
Ensembl chr10:72,366,873...72,390,768
JBrowse link
G Septin5 septin 5 part_of IDA
ISO
IBA
PMID:17685441
(MGI:3822234|PMID:18809578)
PMID:21873635
RGD PMID:18809578 PMID:17685441 PMID:21873635 MGI:3822234, RGD:8553835, RGD:13792537 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
G Septin6 septin 6 part_of IBA
ISO
PMID:21873635
(MGI:3822234|PMID:18809578)
(PMID:25588830)
RGD PMID:18809578 PMID:25588830 PMID:21873635 MGI:3822234, RGD:13792537 NCBI chr  X:116,153,255...116,230,334
Ensembl chr  X:116,153,255...116,230,115
JBrowse link
G Septin7 septin 7 part_of IEA
ISO
ISS
IBA
GO_REF:0000002
(MGI:3822234|PMID:18809578), (MGI:5306816|PMID:22232702)
GO_REF:0000024
(PMID:15485874), (PMID:23572511), (PMID:25588830)
PMID:21873635
InterPro
RGD
UniProt
PMID:15485874 PMID:18809578 PMID:22232702 PMID:23572511 PMID:25588830 More... GO_REF:0000002 GO_REF:0000024 MGI:3822234 MGI:5306816, RGD:13792537 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
JBrowse link
G Septin8 septin 8 part_of IBA
ISO
PMID:21873635
(MGI:3822234|PMID:18809578)
RGD PMID:18809578 PMID:21873635 MGI:3822234, RGD:13792537 NCBI chr10:37,684,639...37,713,704
Ensembl chr10:37,684,639...37,713,174
JBrowse link
G Septin9 septin 9 part_of ISO
ISS
IBA
(PMID:15485874), (PMID:23572511)
(MGI:3822234|PMID:18809578)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:15485874 PMID:18809578 PMID:23572511 PMID:21873635 GO_REF:0000024 MGI:3822234, RGD:13792537 NCBI chr10:102,409,798...102,579,056
Ensembl chr10:102,409,711...102,579,055
JBrowse link
G Tmem250 transmembrane protein 250 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:8,962,657...8,966,349
Ensembl chr 3:8,962,657...8,966,349
JBrowse link
septin ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042936.2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07042937.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043247.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043248.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043249.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043287.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043288.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Septin1 septin 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,832,700...181,836,566
Ensembl chr 1:181,832,701...181,836,566
JBrowse link
G Septin10 septin 10 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:27,101,764...27,194,997
Ensembl chr20:27,101,752...27,194,780
JBrowse link
G Septin11 septin 11 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:14,844,759...14,990,856
Ensembl chr14:14,844,580...14,990,853
JBrowse link
G Septin12 septin 12 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:10,580,900...10,590,582
Ensembl chr10:10,581,008...10,590,581
JBrowse link
G Septin14 septin 14 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:26,975,283...27,005,588
Ensembl chr12:26,975,344...26,998,299
JBrowse link
G Septin2 septin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
JBrowse link
G Septin3 septin 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,783,217...113,811,089
Ensembl chr 7:113,783,095...113,811,087
JBrowse link
G Septin4 septin 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:72,366,729...72,390,764
Ensembl chr10:72,366,873...72,390,768
JBrowse link
G Septin5 septin 5 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
G Septin6 septin 6 located_in
is_active_in
ISO
IBA
(MGI:5306816|PMID:22232702)
PMID:21873635
RGD PMID:22232702 PMID:21873635 MGI:5306816, RGD:13792537 NCBI chr  X:116,153,255...116,230,334
Ensembl chr  X:116,153,255...116,230,115
JBrowse link
G Septin7 septin 7 located_in
is_active_in
ISO
IBA
(MGI:5306816|PMID:22232702)
PMID:21873635
RGD PMID:22232702 PMID:21873635 MGI:5306816, RGD:13792537 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
JBrowse link
G Septin8 septin 8 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,684,639...37,713,704
Ensembl chr10:37,684,639...37,713,174
JBrowse link
G Septin9 septin 9 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:102,409,798...102,579,056
Ensembl chr10:102,409,711...102,579,055
JBrowse link
G Tmem250 transmembrane protein 250 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:8,962,657...8,966,349
Ensembl chr 3:8,962,657...8,966,349
JBrowse link
spectrin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcb protein kinase C, beta part_of IEA
ISO
GO_REF:0000107
(MGI:1346761|PMID:10534118)
Ensembl
RGD
PMID:10534118 GO_REF:0000107 MGI:1346761 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 part_of ISO MGI:1856180|MGI:1856181|MGI:1856377|MGI:1858128 (MGI:55971|PMID:6234993) RGD PMID:6234993 MGI:55971 NCBI chr13:86,203,504...86,279,371
Ensembl chr13:86,203,504...86,279,371
JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 TAS RGD PMID:2753883 RGD:631897 NCBI chr 3:13,241,164...13,306,047
Ensembl chr 3:13,241,217...13,306,046
JBrowse link
G Sptb spectrin, beta, erythrocytic part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:95,310,342...95,437,221
Ensembl chr 6:95,310,326...95,437,118
JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:103,842,684...104,008,507
Ensembl chr14:103,842,684...104,008,507
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 part_of IEA
TAS
ISO
GO_REF:0000107
GO_REF:0000002
PMID:9704016
(PMID:9826670)
Ensembl
InterPro
RGD
PMID:9826670 PMID:9704016 GO_REF:0000002 GO_REF:0000107, RGD:70020 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 part_of ISO (PMID:11086001) RGD PMID:11086001 NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
JBrowse link
terminal web term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Cobl cordon-bleu WH2 repeat protein located_in
is_active_in
ISO
IBA
(MGI:5621262|PMID:22114352)
PMID:21873635
RGD PMID:22114352 PMID:21873635 MGI:5621262, RGD:13792537 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800
JBrowse link
G Hfe homeostatic iron regulator IDA RGD PMID:16208485 RGD:1582698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Krt19 keratin 19 located_in ISO (MGI:5609425|PMID:19321664) RGD PMID:19321664 MGI:5609425 NCBI chr10:85,075,835...85,080,552 JBrowse link
G Pls1 plastin 1 located_in ISO (MGI:5609425|PMID:19321664) RGD PMID:19321664 MGI:5609425 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Vcl vinculin located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      cytoplasm 11373
        cell cortex 345
          cell cortex region + 44
          cleavage apparatus septin structure + 0
          cortical cytoskeleton + 123
          cortical dynamic polarity patch 0
          cortical endoplasmic reticulum + 8
          endocytic patch + 0
          exocyst 20
          nematocyst 0
          polarisome + 0
          septin complex + 21
          septin ring + 21
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      intracellular anatomical structure 14364
        cytoplasm 11373
          cell cortex 345
            cell cortex region + 44
            cleavage apparatus septin structure + 0
            cortical cytoskeleton + 123
            cortical dynamic polarity patch 0
            cortical endoplasmic reticulum + 8
            endocytic patch + 0
            exocyst 20
            nematocyst 0
            polarisome + 0
            septin complex + 21
            septin ring + 21
paths to the root