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ONTOLOGY REPORT - ANNOTATIONS


Term:cilium
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Accession:GO:0005929 term browser browse the term
Definition:A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent. In most eukaryotic species, intracellular sub-components of the cilium, such as the ciliary base and rootlet, are located near the plasma membrane. In Diplomonads such as Giardia, instead, the same ciliary parts are located further intracellularly. Also, 'cilium' may be used when axonemal structure and/or motility are unknown, or when axonemal structure is unusual. For all other cases, please refer to children of 'cilium'. Finally, note that any role of ciliary proteins in sensory events should be captured by annotating to relevant biological process terms.
Synonyms:exact_synonym: eukaryotic flagellum
 narrow_synonym: primary cilium
 related_synonym: flagellum;   microtubule-based flagellum
 alt_id: GO:0072372
 xref: FMA:67181;   NIF_Subcellular:sao787716553;   Wikipedia:Cilium
 only_in_taxon: NCBITaxon:2759 ! Eukaryota


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cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc4 ATP binding cassette subfamily C member 4 NOT ISO (MGI:5615352|PMID:25173977) MGI PMID:25173977 MGI:5615352 NCBI chrNW_004936472:14,396,986...14,624,597 JBrowse link
G Adcy3 adenylate cyclase 3 ISO (MGI:1889935|PMID:11055432), (MGI:5300833|PMID:22179047), (MGI:5451127|PMID:23077041), (MGI:5921791|PMID:28154160) RGD
MGI
PMID:2255909 PMID:11055432 PMID:22179047 PMID:23077041 PMID:28154160 MGI:1889935 MGI:5300833 MGI:5451127 MGI:5921791 RGD:70798 NCBI chrNW_004936493:7,250,194...7,333,433 JBrowse link
G Adcy5 adenylate cyclase 5 ISO (MGI:5014446|PMID:21670265) UniProt PMID:21670265 MGI:5014446 NCBI chrNW_004936725:1,751,272...1,897,937 JBrowse link
G Ahi1 Abelson helper integration site 1 ISO (PMID:18633336)
(MGI:4437526|PMID:20081859)
UniProtKB
CACAO
PMID:18633336 PMID:20081859 MGI:4437526 NCBI chrNW_004936560:2,881,631...3,057,256 JBrowse link
G Akap4 A-kinase anchoring protein 4 ISO (MGI:5292446|PMID:21715716) MGI PMID:21715716 MGI:5292446 NCBI chrNW_004936721:1,692,623...1,700,256 JBrowse link
G Anks3 ankyrin repeat and sterile alpha motif domain containing 3 ISO (MGI:5907420|PMID:26327442) UniProt PMID:26327442 MGI:5907420 NCBI chrNW_004936530:4,698,234...4,723,131 JBrowse link
G Arl13b ADP ribosylation factor like GTPase 13B ISO (PMID:24421332), (PMID:27623382)
(MGI:3707691|PMID:17488627), (MGI:4439200|PMID:20159594), (MGI:4888042|PMID:21209331), (MGI:5300833|PMID:22179047), (MGI:5428054|PMID:22689656), (MGI:5460933|PMID:23153492), (MGI:5488668|PMID:23351563), (MGI:5559921|PMID:24336288), (MGI:6149643|PMID:29487109), (MGI:6405644|PMID:31887266)
MGI PMID:17488627 PMID:20159594 PMID:21209331 PMID:22179047 PMID:22689656 PMID:23153492 PMID:23351563 PMID:24336288 PMID:24421332 PMID:27623382 PMID:29487109 PMID:31887266 MGI:3707691 MGI:4439200 MGI:4888042 MGI:5300833 MGI:5428054 MGI:5460933 MGI:5488668 MGI:5559921 MGI:6149643 MGI:6405644 NCBI chrNW_004936666:115,964...179,639 JBrowse link
G Arl2 ADP ribosylation factor like GTPase 2 NOT ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936599:4,336,190...4,343,007 JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 NOT ISO (PMID:17646400)
(PMID:16525022)
UniProtKB PMID:16525022 PMID:17646400 NCBI chrNW_004936600:3,190,212...3,229,831 JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 NOT ISO (PMID:22139371)
(PMID:17646400)
MGI
UniProtKB
PMID:17646400 PMID:22139371 NCBI chrNW_004936666:3,077,006...3,102,469 JBrowse link
G Armc9 armadillo repeat containing 9 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936525:5,518,691...5,648,109 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:1342366|PMID:10441500) MGI PMID:10441500 MGI:1342366 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Atp6v1d ATPase H+ transporting V1 subunit D colocalizes_with ISO (PMID:21844891) UniProtKB PMID:21844891 NCBI chrNW_004936478:8,991,091...9,065,865 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO (MGI:5828020|PMID:27979967) MGI PMID:27979967 MGI:5828020 NCBI chrNW_004936599:3,059,274...3,076,853 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (PMID:23943788), (PMID:24550735) GO_Central PMID:23943788 PMID:24550735 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 ISO (MGI:5828020|PMID:27979967) MGI PMID:27979967 MGI:5828020 NCBI chrNW_004936509:25,263...45,113 JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 ISO (PMID:22139371), (PMID:23943788), (PMID:24550735) MGI PMID:22139371 PMID:23943788 PMID:24550735 NCBI chrNW_004936478:8,959,198...9,408,683 JBrowse link
G Best2 bestrophin 2 ISO (MGI:3763293|PMID:16912113) HGNC-UCL PMID:16912113 MGI:3763293 NCBI chrNW_004936659:1,862,075...1,867,021 JBrowse link
G Calcr calcitonin receptor ISO (MGI:2656992|PMID:12704735) MGI PMID:12704735 MGI:2656992 NCBI chrNW_004936803:423,558...466,762 JBrowse link
G Catsperb cation channel sperm associated auxiliary subunit beta ISO (MGI:3718725|PMID:17478420) MGI PMID:17478420 MGI:3718725 NCBI chrNW_004936488:18,501,602...18,595,781 JBrowse link
G Cav1 caveolin 1 ISO (MGI:2156264|PMID:11784086) MGI PMID:11784086 MGI:2156264 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Cbl Cbl proto-oncogene ISO (PMID:29237719)
(MGI:6108066|PMID:29237719)
UniProt PMID:29237719 MGI:6108066 NCBI chrNW_004936542:4,136,389...4,235,746 JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO (PMID:27120127) UniProtKB PMID:27120127 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO (PMID:27120127)
(MGI:4936771|PMID:21131974)
UniProtKB
UniProt
PMID:21131974 PMID:27120127 MGI:4936771 NCBI chrNW_004936594:4,075,105...4,124,850 JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (PMID:28235840) UniProtKB PMID:28235840 NCBI chrNW_004936473:7,027,543...7,054,079 JBrowse link
G Ccsap centriole, cilia and spindle associated protein ISO (PMID:22493317) UniProtKB PMID:22493317 NCBI chrNW_004936484:20,271,834...20,277,945 JBrowse link
G Cep164 centrosomal protein 164 ISO (MGI:5448494|PMID:22718903) MGI PMID:22718903 MGI:5448494 NCBI chrNW_004936542:2,544,677...2,609,753 JBrowse link
G Cep19 centrosomal protein 19 ISO (PMID:28625565) UniProtKB PMID:28625565 NCBI chrNW_004936784:1,284,215...1,289,362 JBrowse link
G Cep41 centrosomal protein 41 ISO (PMID:22246503)
(MGI:5309044|PMID:22246503), (MGI:5315186|PMID:22326026)
UniProtKB
UniProt
PMID:22246503 PMID:22326026 MGI:5309044 MGI:5315186 NCBI chrNW_004936579:4,847,137...4,890,478 JBrowse link
G Cetn2 centrin 2 ISO (MGI:4437526|PMID:20081859) UniProt PMID:20081859 MGI:4437526 NCBI chrNW_004936714:274,098...279,177 JBrowse link
G Cfap126 cilia and flagella associated protein 126 ISO (MGI:5607445|PMID:25296022) UniProt PMID:25296022 MGI:5607445 NCBI chrNW_004936903:638,391...642,241 JBrowse link
G Cfap20 cilia and flagella associated protein 20 ISO (PMID:20118210)
(MGI:5315186|PMID:22326026)
UniProtKB
MGI
PMID:20118210 PMID:22326026 MGI:5315186 NCBI chrNW_004936475:10,011,671...10,023,643 JBrowse link
G Cfap221 cilia and flagella associated protein 221 ISO (MGI:3771635|PMID:18039845) MGI PMID:18039845 MGI:3771635 NCBI chrNW_004936469:50,742,420...50,840,402 JBrowse link
G Cfap94 cilia and flagella associated protein 94 ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004936548:2,123,248...2,197,245 JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936544:6,848,026...6,868,522 JBrowse link
G Cilk1 ciliogenesis associated kinase 1 ISO (MGI:5787768|PMID:25243405) UniProt PMID:25243405 MGI:5787768 NCBI chrNW_004936476:7,830,714...7,869,533 JBrowse link
G Cluap1 clusterin associated protein 1 ISO (MGI:4397703|PMID:19253336), (MGI:5488668|PMID:23351563) MGI PMID:19253336 PMID:23351563 MGI:4397703 MGI:5488668 NCBI chrNW_004936694:779,399...810,534 JBrowse link
G Csnk2b casein kinase 2 beta ISO RGD PMID:19711102 RGD:11565138 NCBI chrNW_004936727:1,857,596...1,862,551 JBrowse link
G Cyrib CYFIP related Rac1 interactor B ISO (MGI:5315186|PMID:22326026) MGI PMID:22326026 MGI:5315186 NCBI chrNW_004936470:18,665,898...18,803,864 JBrowse link
G Dcdc2 doublecortin domain containing 2 colocalizes_with ISO (PMID:21698230), (PMID:25601850), (PMID:27319779) RGD
GO_Central
PMID:21698230 PMID:25601850 PMID:27319779 RGD:10047152 RGD:10412291 NCBI chrNW_004936671:605,114...736,217 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO (MGI:3589712|PMID:15888450) MGI PMID:15888450 MGI:3589712 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Dnah11 dynein axonemal heavy chain 11 ISO (MGI:6405644|PMID:31887266) MGI PMID:31887266 MGI:6405644 NCBI chrNW_004936546:7,370,180...7,681,835 JBrowse link
G Dnah7 dynein axonemal heavy chain 7 ISO (PMID:11877439) MGI PMID:11877439 NCBI chrNW_004936506:3,001,304...3,298,241 JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 ISO (PMID:27120127) UniProtKB PMID:27120127 NCBI chrNW_004936524:2,551,431...2,614,245 JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 ISO (MGI:6284218|PMID:29916806) MGI PMID:29916806 MGI:6284218 NCBI chrNW_004936655:163,565...188,431 JBrowse link
G Dnali1 dynein axonemal light intermediate chain 1 ISO (PMID:27120127)
(MGI:6284218|PMID:29916806)
UniProtKB
MGI
PMID:27120127 PMID:29916806 MGI:6284218 NCBI chrNW_004936474:19,779,731...19,787,860 JBrowse link
G Drd1 dopamine receptor D1 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936609:790,647...795,187 JBrowse link
G Drd2 dopamine receptor D2 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Drd5 dopamine receptor D5 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936477:16,860,222...16,863,505 JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 ISO (MGI:5315186|PMID:22326026) MGI PMID:22326026 MGI:5315186 NCBI chrNW_004936856:724,863...792,490 JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 ISO (PMID:25205765)
(MGI:5906938|PMID:28379358)
UniProt PMID:25205765 PMID:28379358 MGI:5906938 NCBI chrNW_004936487:16,142,659...16,157,929 JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ISO (PMID:12802074) BHF-UCL PMID:12802074 NCBI chrNW_004936508:8,119,733...8,149,022 JBrowse link
G Efhc1 EF-hand domain containing 1 ISO (MGI:3529636|PMID:15670853) MGI PMID:15670853 MGI:3529636 NCBI chrNW_004936476:8,347,907...8,401,224 JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:17374697 RGD:8694205 NCBI chrNW_004936495:7,956,168...8,018,356 JBrowse link
G Evc EvC ciliary complex subunit 1 ISO (PMID:21356043)
(MGI:5294521|PMID:21356043)
UniProtKB
UniProt
PMID:21356043 MGI:5294521 NCBI chrNW_004936477:17,940,792...17,992,996 JBrowse link
G Evc2 EvC ciliary complex subunit 2 ISO (MGI:5294521|PMID:21356043) UniProt PMID:21356043 MGI:5294521 NCBI chrNW_004936477:17,835,479...17,938,014 JBrowse link
G Fank1 fibronectin type III and ankyrin repeat domains 1 ISO (MGI:5883143|PMID:27914912) UniProt PMID:27914912 MGI:5883143 NCBI chrNW_004936486:13,935,713...13,955,129 JBrowse link
G Ffar4 free fatty acid receptor 4 ISO (PMID:31761534)
(MGI:6383338|PMID:31761534)
UniProt PMID:31761534 MGI:6383338 NCBI chrNW_004936601:1,413,236...1,434,036 JBrowse link
G Fhdc1 FH2 domain containing 1 ISO (PMID:29742020) UniProt PMID:29742020 NCBI chrNW_004936689:2,803,714...2,836,903 JBrowse link
G Flcn folliculin ISO (PMID:23784378) UniProt PMID:23784378 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Galr2 galanin receptor 2 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936594:1,236,281...1,239,213 JBrowse link
G Galr3 galanin receptor 3 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936492:3,301,409...3,303,512 JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO (MGI:3654822|PMID:16687649) MGI PMID:16687649 MGI:3654822 NCBI chrNW_004936570:819,562...830,072 JBrowse link
G Gas8 growth arrest specific 8 ISO (PMID:16643277), (PMID:27120127) UniProtKB PMID:16643277 PMID:27120127 NCBI chrNW_004936641:92,893...109,006 JBrowse link
G Gli1 GLI family zinc finger 1 ISO (MGI:3692156|PMID:16254602), (MGI:4355593|PMID:19684112) MGI PMID:16254602 PMID:19684112 MGI:3692156 MGI:4355593 NCBI chrNW_004936646:1,622,308...1,629,787 JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:3692156|PMID:16254602), (MGI:3841503|PMID:19286674), (MGI:4355593|PMID:19684112), (MGI:4361064|PMID:19654211), (MGI:4888042|PMID:21209331), (MGI:5428054|PMID:22689656), (MGI:5617062|PMID:25644602), (MGI:6149643|PMID:29487109) BHF-UCL PMID:16254602 PMID:19286674 PMID:19654211 PMID:19684112 PMID:21209331 PMID:22689656 PMID:25644602 PMID:29487109 MGI:3692156 MGI:3841503 MGI:4355593 MGI:4361064 MGI:4888042 MGI:5428054 MGI:5617062 MGI:6149643 NCBI chrNW_004936469:49,616,552...49,788,760 JBrowse link
G Gli3 GLI family zinc finger 3 ISO (PMID:16254602), (PMID:19592253)
(MGI:4355593|PMID:19684112), (MGI:4888042|PMID:21209331), (MGI:5317033|PMID:21289087), (MGI:5578069|PMID:24927541), (MGI:6149643|PMID:29487109)
MGI PMID:16254602 PMID:19592253 PMID:19684112 PMID:21209331 PMID:21289087 PMID:24927541 PMID:29487109 MGI:4355593 MGI:4888042 MGI:5317033 MGI:5578069 MGI:6149643 NCBI chrNW_004936478:17,129,922...17,403,630 JBrowse link
G Gpr161 G protein-coupled receptor 161 ISO (MGI:5468365|PMID:23332756), (MGI:5921791|PMID:28154160) UniProt PMID:23332756 PMID:28154160 MGI:5468365 MGI:5921791 NCBI chrNW_004936481:18,097,704...18,130,023 JBrowse link
G Gpr19 G protein-coupled receptor 19 ISO (PMID:28154160)
(MGI:5921791|PMID:28154160)
MGI PMID:28154160 MGI:5921791 NCBI chrNW_004936587:4,596,231...4,633,792 JBrowse link
G Gpr83 G protein-coupled receptor 83 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936674:541,934...553,191 JBrowse link
G Gpr88 G protein-coupled receptor 88 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936748:657,876...662,831 JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:16374707 RGD:5685597 NCBI chrNW_004936657:425,902...522,331 JBrowse link
G Hk1 hexokinase 1 ISO (MGI:3654822|PMID:16687649) MGI PMID:16687649 MGI:3654822 NCBI chrNW_004936521:9,067,062...9,139,112 JBrowse link
G Hspb11 heat shock protein family B (small) member 11 ISO (MGI:4397703|PMID:19253336) MGI PMID:19253336 MGI:4397703 NCBI chrNW_004936522:7,188,752...7,214,926 JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936474:5,848,719...5,858,520 JBrowse link
G Ift122 intraflagellar transport 122 ISO (PMID:29220510)
(MGI:4888042|PMID:21209331)
UniProt PMID:21209331 PMID:29220510 MGI:4888042 NCBI chrNW_004936602:908,034...956,634 JBrowse link
G Ift140 intraflagellar transport 140 ISO (PMID:27932497)
(MGI:4460838|PMID:20368623), (MGI:4888042|PMID:21209331), (MGI:6149643|PMID:29487109)
UniProt
BHF-UCL
PMID:20368623 PMID:21209331 PMID:27932497 PMID:29487109 MGI:4460838 MGI:4888042 MGI:6149643 NCBI chrNW_004936694:2,344,448...2,419,396 JBrowse link
G Ift172 intraflagellar transport 172 ISO (MGI:2679893|PMID:14603322) UniProt PMID:14603322 MGI:2679893 NCBI chrNW_004936493:5,108,437...5,145,160 JBrowse link
G Ift20 intraflagellar transport 20 ISO (MGI:3689465|PMID:16775004), (MGI:3703185|PMID:17312020), (MGI:4397703|PMID:19253336), (MGI:5787768|PMID:25243405), (MGI:6108066|PMID:29237719) MGI PMID:16775004 PMID:17312020 PMID:19253336 PMID:25243405 PMID:29237719 MGI:3689465 MGI:3703185 MGI:4397703 MGI:5787768 MGI:6108066 NCBI chrNW_004936538:4,484,484...4,491,688 JBrowse link
G Ift22 intraflagellar transport 22 ISO (MGI:4397703|PMID:19253336) MGI PMID:19253336 MGI:4397703 NCBI chrNW_004936543:1,161,457...1,166,529 JBrowse link
G Ift27 intraflagellar transport 27 ISO (PMID:25443296)
(MGI:4397703|PMID:19253336)
UniProtKB
MGI
PMID:19253336 PMID:25443296 MGI:4397703 NCBI chrNW_004936492:4,077,957...4,089,898 JBrowse link
G Ift43 intraflagellar transport 43 ISO (PMID:27932497)
(MGI:5787768|PMID:25243405)
UniProt PMID:25243405 PMID:27932497 MGI:5787768 NCBI chrNW_004936488:5,011,792...5,090,980 JBrowse link
G Ift46 intraflagellar transport 46 ISO (MGI:3761965|PMID:17720815), (MGI:4397703|PMID:19253336) MGI PMID:17720815 PMID:19253336 MGI:3761965 MGI:4397703 NCBI chrNW_004936542:3,577,387...3,597,954 JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:4397703|PMID:19253336), (MGI:5551659|PMID:24469809) MGI PMID:19253336 PMID:24469809 MGI:4397703 MGI:5551659 NCBI chrNW_004936530:2,965,587...3,003,758 JBrowse link
G Ift57 intraflagellar transport 57 ISO (MGI:4397703|PMID:19253336), (MGI:4888042|PMID:21209331) BHF-UCL PMID:19253336 PMID:21209331 MGI:4397703 MGI:4888042 NCBI chrNW_004936645:1,471,393...1,524,193 JBrowse link
G Ift74 intraflagellar transport 74 ISO (MGI:4397703|PMID:19253336) MGI PMID:19253336 MGI:4397703 NCBI chrNW_004936611:2,588,711...2,660,496 JBrowse link
G Ift80 intraflagellar transport 80 ISO (MGI:4397703|PMID:19253336), (MGI:5473722|PMID:23333501) MGI PMID:19253336 PMID:23333501 MGI:4397703 MGI:5473722 NCBI chrNW_004936708:238,302...362,537 JBrowse link
G Ift81 intraflagellar transport 81 ISO (MGI:4397703|PMID:19253336) MGI PMID:19253336 MGI:4397703 NCBI chrNW_004936558:3,177,418...3,251,439 JBrowse link
G Ift88 intraflagellar transport 88 ISO (PMID:24421332), (PMID:27727273), (PMID:28428259)
(MGI:3844802|PMID:18285569), (MGI:4397703|PMID:19253336), (MGI:4439200|PMID:20159594), (MGI:4457459|PMID:20230748), (MGI:4888042|PMID:21209331), (MGI:5428054|PMID:22689656), (MGI:5551659|PMID:24469809), (MGI:5578069|PMID:24927541), (MGI:5615046|PMID:25294941), (MGI:5805574|PMID:27727273), (MGI:6149643|PMID:29487109)
MGI PMID:18285569 PMID:19253336 PMID:20159594 PMID:20230748 PMID:21209331 PMID:22689656 PMID:24421332 PMID:24469809 PMID:24927541 PMID:25294941 PMID:27727273 PMID:28428259 PMID:29487109 MGI:3844802 MGI:4397703 MGI:4439200 MGI:4457459 MGI:4888042 MGI:5428054 MGI:5551659 MGI:5578069 MGI:5615046 MGI:5805574 MGI:6149643 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E ISO (MGI:5921791|PMID:28154160) MGI PMID:28154160 MGI:5921791 NCBI chrNW_004936669:1,377,005...1,385,287 JBrowse link
G Kif17 kinesin family member 17 ISO (MGI:5787768|PMID:25243405) UniProt PMID:25243405 MGI:5787768 NCBI chrNW_004936474:6,598,641...6,642,491 JBrowse link
G Kif19 kinesin family member 19 ISO (MGI:5460922|PMID:23168168) UniProt PMID:23168168 MGI:5460922 NCBI chrNW_004936655:131,367...156,888 JBrowse link
G Kif27 kinesin family member 27 ISO (MGI:3844768|PMID:19305393) UniProt PMID:19305393 MGI:3844768 NCBI chrNW_004936828:706,635...796,826 JBrowse link
G Kif3a kinesin family member 3A ISO (MGI:3762082|PMID:17825299), (MGI:5014446|PMID:21670265), (MGI:6406725|PMID:20172860) UniProt PMID:17825299 PMID:20172860 PMID:21670265 MGI:3762082 MGI:5014446 MGI:6406725 NCBI chrNW_004936647:2,461,017...2,502,550 JBrowse link
G Kif3b kinesin family member 3B ISO (MGI:4397703|PMID:19253336), (MGI:5787768|PMID:25243405) UniProt PMID:19253336 PMID:25243405 MGI:4397703 MGI:5787768 NCBI chrNW_004936485:19,180,751...19,198,321 JBrowse link
G Kif7 kinesin family member 7 ISO (PMID:19592253)
(MGI:4355635|PMID:19666503)
UniProtKB
UniProt
PMID:19592253 PMID:19666503 MGI:4355635 NCBI chrNW_004936483:15,430,735...15,450,872 JBrowse link
G Kiss1r KISS1 receptor ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936588:384,195...387,625 JBrowse link
G Lca5 lebercilin LCA5 ISO (PMID:21606596)
(MGI:5050784|PMID:21606596)
MGI PMID:21606596 MGI:5050784 NCBI chrNW_004936510:10,652,378...10,702,761 JBrowse link
G LOC101966253 transmembrane protein 121 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936621:71,057...98,853 JBrowse link
G LOC101970352 L-lactate dehydrogenase C chain ISO (MGI:3654822|PMID:16687649) MGI PMID:16687649 MGI:3654822 NCBI chrNW_004936528:827,322...862,832 JBrowse link
G Lrrc6 leucine rich repeat containing 6 ISO (PMID:23122589) BHF-UCL PMID:23122589 NCBI chrNW_004936470:16,557,381...16,640,519 JBrowse link
G Mchr1 melanin concentrating hormone receptor 1 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936492:1,153,895...1,156,980 JBrowse link
G Mlf1 myeloid leukemia factor 1 ISO (MGI:5883143|PMID:27914912) UniProt PMID:27914912 MGI:5883143 NCBI chrNW_004936519:5,208,288...5,241,375 JBrowse link
G Mok MOK protein kinase ISO (MGI:5787768|PMID:25243405) UniProt PMID:25243405 MGI:5787768 NCBI chrNW_004936835:432,403...479,605 JBrowse link
G Naxe NAD(P)HX epimerase ISO (MGI:3834507|PMID:18202122) MGI PMID:18202122 MGI:3834507 NCBI chrNW_004936580:5,769,583...5,772,633 JBrowse link
G Nek8 NIMA related kinase 8 ISO (PMID:18199800)
(MGI:5285178|PMID:16267153)
CACAO
UniProt
PMID:16267153 PMID:18199800 MGI:5285178 NCBI chrNW_004936538:4,938,739...4,952,083 JBrowse link
G Nme5 NME/NM23 family member 5 ISO (MGI:6404703|PMID:32203505) UniProt PMID:32203505 MGI:6404703 NCBI chrNW_004936531:7,296,565...7,318,628 JBrowse link
G Notch2 notch receptor 2 ISO (MGI:5013962|PMID:21703454) MGI PMID:21703454 MGI:5013962 NCBI chrNW_004936872:454,273...539,544 JBrowse link
G Npffr1 neuropeptide FF receptor 1 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936521:8,327,093...8,342,390 JBrowse link
G Nphp3 nephrocystin 3 ISO (PMID:20462968), (PMID:22085962)
(MGI:5646196|PMID:22328406)
UniProtKB
MGI
PMID:20462968 PMID:22085962 PMID:22328406 MGI:5646196 NCBI chrNW_004936529:6,013,321...6,048,249 JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936576:1,932,526...1,939,560 JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 ISO (PMID:23261303) UniProtKB PMID:23261303 NCBI chrNW_004936664:2,439,434...2,464,878 JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 ISO (MGI:5607398|PMID:24067530) UniProt PMID:24067530 MGI:5607398 NCBI chrNW_004936659:1,491,598...1,501,245 JBrowse link
G Odf2 outer dense fiber of sperm tails 2 NOT ISO (PMID:17646400)
(MGI:3654822|PMID:16687649), (MGI:3696904|PMID:16920728)
UniProtKB
MGI
PMID:16687649 PMID:16920728 PMID:17646400 MGI:3654822 MGI:3696904 NCBI chrNW_004936487:15,987,893...16,029,539 JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein ISO (PMID:20230748)
(MGI:4457459|PMID:20230748)
UniProtKB
UniProt
PMID:20230748 MGI:4457459 NCBI chrNW_004936470:3,292,961...3,331,915 JBrowse link
G P2ry1 purinergic receptor P2Y1 ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936519:865,756...872,466 JBrowse link
G Pacrg parkin coregulated ISO (MGI:3851298|PMID:19463890) MGI PMID:19463890 MGI:3851298 NCBI chrNW_004936489:13,328,143...13,787,329 JBrowse link
G Pcare photoreceptor cilium actin regulator ISO (PMID:20398886) MGI PMID:20398886 NCBI chrNW_004936493:3,768,032...3,781,511 JBrowse link
G Pde1c phosphodiesterase 1C ISO (MGI:3850900|PMID:19305400) MGI PMID:19305400 MGI:3850900 NCBI chrNW_004936478:7,900,432...8,499,300 JBrowse link
G Pde4c phosphodiesterase 4C ISO (MGI:5014446|PMID:21670265) UniProt PMID:21670265 MGI:5014446 NCBI chrNW_004936596:2,962,671...2,984,831 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO (MGI:6108066|PMID:29237719) UniProt PMID:29237719 MGI:6108066 NCBI chrNW_004936482:16,804,129...16,853,539 JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (PMID:20440071) UniProtKB PMID:20440071 NCBI chrNW_004936600:4,660,211...4,678,911 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:28154160)
(MGI:2449360|PMID:12514735), (MGI:3844802|PMID:18285569), (MGI:5603942|PMID:24939912), (MGI:6210198|PMID:25405894)
MGI PMID:12514735 PMID:18285569 PMID:24939912 PMID:25405894 PMID:28154160 MGI:2449360 MGI:3844802 MGI:5603942 MGI:6210198 NCBI chrNW_004936694:1,923,383...1,958,160 JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting ISO (MGI:4946570|PMID:21307093) BHF-UCL PMID:21307093 MGI:4946570 NCBI chrNW_004936478:22,255,887...22,389,477 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:28154160)
(MGI:4946570|PMID:21307093)
(MGI:2449360|PMID:12514735), (MGI:2653432|PMID:12640140), (MGI:3609104|PMID:16316413), (MGI:3805610|PMID:18552856), (MGI:5315687|PMID:19265036), (MGI:5441703|PMID:21685914), (MGI:5921791|PMID:28154160), (MGI:6210198|PMID:25405894)
MGI
BHF-UCL
PMID:12514735 PMID:12640140 PMID:16316413 PMID:18552856 PMID:19265036 PMID:21307093 PMID:21685914 PMID:25405894 PMID:28154160 MGI:2449360 MGI:2653432 MGI:3609104 MGI:3805610 MGI:4946570 MGI:5315687 MGI:5441703 MGI:5921791 MGI:6210198 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO (MGI:3773566|PMID:18202188), (MGI:5438087|PMID:22021705), (MGI:5921791|PMID:28154160), (MGI:6467716|PMID:16956880), (MGI:6467923|PMID:17470460)
(PMID:15458427), (PMID:16956880), (PMID:17470460)
(PMID:20048263)
RGD
UniProt
PMID:12925574 PMID:15458427 PMID:16956880 PMID:17470460 PMID:18202188 PMID:20048263 PMID:22021705 PMID:28154160 MGI:3773566 MGI:5438087 MGI:5921791 MGI:6467716 MGI:6467923 RGD:1642442 NCBI chrNW_004936476:8,730,766...9,160,102 JBrowse link
G Pkm pyruvate kinase M1/2 ISO (MGI:3654822|PMID:16687649) MGI PMID:16687649 MGI:3654822 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO RGD PMID:23994472 RGD:9685166 NCBI chrNW_004936721:825,171...830,010 JBrowse link
G Prlhr prolactin releasing hormone receptor ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936486:8,177,111...8,181,663 JBrowse link
G Prom1 prominin 1 ISO (MGI:4938266|PMID:17109118) UniProt PMID:17109118 MGI:4938266 NCBI chrNW_004936477:11,878,261...12,017,228 JBrowse link
G Prom2 prominin 2 ISO PMID:17109118 UniProt PMID:17109118 RGD:8554554 NCBI chrNW_004936744:73,004...85,911 JBrowse link
G Ptch1 patched 1 ISO (MGI:4355593|PMID:19684112), (MGI:4361064|PMID:19654211) MGI PMID:19654211 PMID:19684112 MGI:4355593 MGI:4361064 NCBI chrNW_004936626:4,241,993...4,301,919 JBrowse link
G Rab10 RAB10, member RAS oncogene family ISO PMID:20576682
(MGI:5448525|PMID:20576682)
(PMID:20576682)
UniProt
UniProtKB
PMID:20576682 MGI:5448525 RGD:8553613 NCBI chrNW_004936493:6,263,870...6,351,327 JBrowse link
G Rab14 RAB14, member RAS oncogene family NOT ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936487:9,675,517...9,699,469 JBrowse link
G Rab15 RAB15, member RAS oncogene family ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936495:8,590,844...8,622,655 JBrowse link
G Rab8a RAB8A, member RAS oncogene family colocalizes_with ISO (PMID:17646400), (PMID:24421332)
(MGI:5551659|PMID:24469809)
(MGI:6467684|PMID:20048263)
(PMID:21844891)
UniProtKB
MGI
UniProt
PMID:17646400 PMID:20048263 PMID:21844891 PMID:24421332 PMID:24469809 MGI:5551659 MGI:6467684 NCBI chrNW_004936596:4,385,788...4,403,393 JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:18687752 RGD:9850084 NCBI chrNW_004936509:2,722,279...3,006,436 JBrowse link
G Rilpl1 Rab interacting lysosomal protein like 1 ISO (MGI:5507904|PMID:23264467) UniProt PMID:23264467 MGI:5507904 NCBI chrNW_004936558:1,261,103...1,294,397 JBrowse link
G Rilpl2 Rab interacting lysosomal protein like 2 ISO (MGI:5507904|PMID:23264467) UniProt PMID:23264467 MGI:5507904 NCBI chrNW_004936558:1,318,282...1,341,799 JBrowse link
G Ropn1l rhophilin associated tail protein 1 like ISO (PMID:27120127) UniProtKB PMID:27120127 NCBI chrNW_004936643:2,516,243...2,532,149 JBrowse link
G Rp1 RP1 axonemal microtubule associated ISO (MGI:2156902|PMID:11773008), (MGI:2654998|PMID:12651948) MGI PMID:11773008 PMID:12651948 MGI:2156902 MGI:2654998 NCBI chrNW_004936496:1,396,838...1,411,082 JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO (MGI:1933524|PMID:11104772), (MGI:2654998|PMID:12651948), (MGI:4950337|PMID:21212183) RGD
MGI
PMID:11104772 PMID:12651948 PMID:20805823 PMID:21212183 MGI:1933524 MGI:2654998 MGI:4950337 RGD:8553230 NCBI chrNW_004936502:5,163,164...5,212,940 JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (MGI:2654998|PMID:12651948) MGI PMID:12651948 MGI:2654998 NCBI chrNW_004936880:440,900...511,503 JBrowse link
G Rpgrip1l RPGRIP1 like ISO (PMID:17558409) MGI PMID:17558409 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
G Rsph1 radial spoke head component 1 ISO (MGI:6404703|PMID:32203505) UniProt PMID:32203505 MGI:6404703 NCBI chrNW_004936500:1,402,289...1,423,398 JBrowse link
G Rsph3 radial spoke head 3 ISO (PMID:27120127) UniProtKB PMID:27120127 NCBI chrNW_004936489:10,568,736...10,592,912 JBrowse link
G Rsph4a radial spoke head component 4A ISO (MGI:6404703|PMID:32203505) UniProt PMID:32203505 MGI:6404703 NCBI chrNW_004937068:45,105...59,540 JBrowse link
G Smo smoothened, frizzled class receptor ISO (PMID:27727273)
(MGI:3606828|PMID:16136078), (MGI:3610248|PMID:16229832), (MGI:3804352|PMID:18488998), (MGI:4355593|PMID:19684112), (MGI:4361064|PMID:19654211), (MGI:4888042|PMID:21209331), (MGI:5428054|PMID:22689656), (MGI:5617062|PMID:25644602), (MGI:5921791|PMID:28154160), (MGI:6148647|PMID:21659505), (MGI:6149643|PMID:29487109)
MGI
UniProt
PMID:16136078 PMID:16229832 PMID:18488998 PMID:19654211 PMID:19684112 PMID:21209331 PMID:21659505 PMID:22689656 PMID:25644602 PMID:27727273 PMID:28154160 PMID:29487109 MGI:3606828 MGI:3610248 MGI:3804352 MGI:4355593 MGI:4361064 MGI:4888042 MGI:5428054 MGI:5617062 MGI:5921791 MGI:6148647 MGI:6149643 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Sntn sentan, cilia apical structure protein ISO (MGI:6284218|PMID:29916806) MGI PMID:29916806 MGI:6284218 NCBI chrNW_004936637:2,738,068...2,753,610 JBrowse link
G Sstr3 somatostatin receptor 3 ISO (PMID:28154160)
(MGI:5448494|PMID:22718903), (MGI:5921791|PMID:28154160)
MGI PMID:22718903 PMID:28154160 MGI:5448494 MGI:5921791 NCBI chrNW_004936492:3,745,455...3,752,330 JBrowse link
G Stoml3 stomatin like 3 ISO (MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:5014119 NCBI chrNW_004936565:6,632,015...6,653,813 JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO (MGI:3692156|PMID:16254602), (MGI:4355593|PMID:19684112), (MGI:4888042|PMID:21209331) MGI PMID:16254602 PMID:19684112 PMID:21209331 MGI:3692156 MGI:4355593 MGI:4888042 NCBI chrNW_004936600:3,270,662...3,381,722 JBrowse link
G Tbc1d30 TBC1 domain family member 30 ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936545:3,075,135...3,117,750 JBrowse link
G Tedc2 tubulin epsilon and delta complex 2 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936694:1,591,392...1,595,693 JBrowse link
G Tmem138 transmembrane protein 138 ISO (PMID:22282472) UniProtKB PMID:22282472 NCBI chrNW_004936581:1,679,265...1,683,568 JBrowse link
G Tmem216 transmembrane protein 216 ISO (PMID:22282472) UniProtKB PMID:22282472 NCBI chrNW_004936581:1,654,021...1,658,526 JBrowse link
G Tmem67 transmembrane protein 67 colocalizes_with ISO RGD PMID:23516626 RGD:11535084 NCBI chrNW_004936544:6,887,867...6,931,669 JBrowse link
G Togaram1 TOG array regulator of axonemal microtubules 1 ISO (MGI:5796072|PMID:26378256) UniProt PMID:26378256 MGI:5796072 NCBI chrNW_004936583:4,213,853...4,298,916 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (MGI:4397703|PMID:19253336) MGI PMID:19253336 MGI:4397703 NCBI chrNW_004936525:115,614...174,641 JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 ISO (PMID:19790068)
(MGI:3582145|PMID:15858826)
AgBase
MGI
PMID:15858826 PMID:19790068 MGI:3582145 NCBI chrNW_004936769:1,424,526...1,447,547 JBrowse link
G Ttc23 tetratricopeptide repeat domain 23 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936483:4,265,769...4,360,149 JBrowse link
G Ttc26 tetratricopeptide repeat domain 26 ISO PMID:22718903
(MGI:4397703|PMID:19253336), (MGI:5448494|PMID:22718903), (MGI:5607391|PMID:24596149)
UniProt PMID:19253336 PMID:22718903 PMID:24596149 MGI:4397703 MGI:5448494 MGI:5607391 RGD:8553372 NCBI chrNW_004936592:3,402,950...3,468,174 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (PMID:14520415)
(MGI:5787768|PMID:25243405)
BHF-UCL
UniProt
PMID:14520415 PMID:25243405 MGI:5787768 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
G Ttll10 tubulin tyrosine ligase like 10 ISO (MGI:3850271|PMID:19524510) UniProt PMID:19524510 MGI:3850271 NCBI chrNW_004936737:1,910,286...1,926,061 JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 ISO (MGI:5754679|PMID:24791901) MGI PMID:24791901 MGI:5754679 NCBI chrNW_004936488:4,723,314...4,983,926 JBrowse link
G Ttll8 tubulin tyrosine ligase like 8 ISO (MGI:3850271|PMID:19524510) UniProt PMID:19524510 MGI:3850271 NCBI chrNW_004936629:720,842...766,247 JBrowse link
G Tub TUB bipartite transcription factor ISO (PMID:28154160) MGI PMID:28154160 NCBI chrNW_004936528:9,829,889...9,912,645 JBrowse link
G Tubb4a tubulin beta 4A class IVa ISO (MGI:2156148|PMID:11724907), (MGI:2683836|PMID:14625387), (MGI:5484953|PMID:23284756) MGI PMID:11724907 PMID:14625387 PMID:23284756 MGI:2156148 MGI:2683836 MGI:5484953 NCBI chrNW_004936588:3,821,171...3,826,827 JBrowse link
G Tubg1 tubulin gamma 1 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936490:17,357,782...17,363,006 JBrowse link
G Tulp3 TUB like protein 3 ISO (PMID:20889716), (PMID:27932497), (PMID:28154160)
(MGI:3841503|PMID:19286674), (MGI:4888042|PMID:21209331)
UniProt PMID:19286674 PMID:20889716 PMID:21209331 PMID:27932497 PMID:28154160 MGI:3841503 MGI:4888042 NCBI chrNW_004936606:3,209,170...3,278,809 JBrowse link
G Txndc15 thioredoxin domain containing 15 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936597:2,097,535...2,112,144 JBrowse link
G Ubxn10 UBX domain protein 10 ISO (PMID:26389662) UniProtKB PMID:26389662 NCBI chrNW_004936474:6,219,665...6,227,617 JBrowse link
G Umod uromodulin ISO (PMID:20172860)
(MGI:6406725|PMID:20172860)
UniProtKB
MGI
PMID:20172860 MGI:6406725 NCBI chrNW_004936501:5,833,391...5,846,021 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:3762082|PMID:17825299) MGI PMID:17825299 MGI:3762082 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
G Wdr11 WD repeat domain 11 ISO (MGI:5315186|PMID:22326026) MGI PMID:22326026 MGI:5315186 NCBI chrNW_004936486:10,007,728...10,061,640 JBrowse link
G Wdr19 WD repeat domain 19 ISO (MGI:5314316|PMID:22228095) MGI PMID:22228095 MGI:5314316 NCBI chrNW_004936482:6,863,592...6,937,810 JBrowse link
G Whrn whirlin ISO (MGI:2682448|PMID:12833159) MGI PMID:12833159 MGI:2682448 NCBI chrNW_004936487:3,668,465...3,748,234 JBrowse link
9+0 motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein axonemal heavy chain 11 ISO (MGI:6120222|PMID:26909801) MGI PMID:26909801 MGI:6120222 NCBI chrNW_004936546:7,370,180...7,681,835 JBrowse link
G Enkur enkurin, TRPC channel interacting protein ISO (MGI:6110984|PMID:29257953) MGI PMID:29257953 MGI:6110984 NCBI chrNW_004936484:679,541...700,898 JBrowse link
9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH1orf115 chromosome unknown C1orf115 homolog ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936650:1,575,098...1,586,515 JBrowse link
G CUNH4orf47 chromosome unknown C4orf47 homolog ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936554:3,908,570...3,925,957 JBrowse link
G Dynll2 dynein light chain LC8-type 2 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936490:4,968,806...4,977,691 JBrowse link
G Ift80 intraflagellar transport 80 ISO (MGI:5807019|PMID:26996322) MGI PMID:26996322 MGI:5807019 NCBI chrNW_004936708:238,302...362,537 JBrowse link
G Iftap intraflagellar transport associated protein ISO (MGI:5807035|PMID:26703212) MGI PMID:26703212 MGI:5807035 NCBI chrNW_004936533:1,746,762...1,805,191 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO (MGI:5604763|PMID:24586199) MGI PMID:24586199 MGI:5604763 NCBI chrNW_004936476:8,730,766...9,160,102 JBrowse link
G Smo smoothened, frizzled class receptor ISO (MGI:5807019|PMID:26996322) MGI PMID:26996322 MGI:5807019 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936569:1,153,376...1,201,704 JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936488:4,723,314...4,983,926 JBrowse link
G Ttll6 tubulin tyrosine ligase like 6 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936490:12,625,977...12,652,318 JBrowse link
G Ttll7 tubulin tyrosine ligase like 7 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936608:1,534,847...1,675,997 JBrowse link
G Tulp3 TUB like protein 3 ISO (PMID:20889716) MGI PMID:20889716 NCBI chrNW_004936606:3,209,170...3,278,809 JBrowse link
9+2 motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 ISO (MGI:6209354|PMID:29891944) MGI PMID:29891944 MGI:6209354 NCBI chrNW_004936621:2,247,082...2,374,407 JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO (MGI:6111002|PMID:29317443) MGI PMID:29317443 MGI:6111002 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Cep164 centrosomal protein 164 ISO (MGI:6209354|PMID:29891944) MGI PMID:29891944 MGI:6209354 NCBI chrNW_004936542:2,544,677...2,609,753 JBrowse link
G Cetn2 centrin 2 ISO (MGI:6209354|PMID:29891944) MGI PMID:29891944 MGI:6209354 NCBI chrNW_004936714:274,098...279,177 JBrowse link
G Cfap43 cilia and flagella associated protein 43 ISO (MGI:6402702|PMID:31884020) MGI PMID:31884020 MGI:6402702 NCBI chrNW_004936600:1,954,987...2,042,834 JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin ISO (MGI:6209354|PMID:29891944) MGI PMID:29891944 MGI:6209354 NCBI chrNW_004936474:3,918,237...3,958,635 JBrowse link
G Dnah11 dynein axonemal heavy chain 11 ISO (PMID:26909801)
(MGI:6120222|PMID:26909801)
GO_Central
MGI
PMID:26909801 MGI:6120222 NCBI chrNW_004936546:7,370,180...7,681,835 JBrowse link
G Dnah5 dynein axonemal heavy chain 5 ISO (PMID:26909801)
(MGI:5514194|PMID:23525783)
GO_Central
MGI
PMID:23525783 PMID:26909801 MGI:5514194 NCBI chrNW_004936665:2,267,272...2,545,765 JBrowse link
G Dnah9 dynein axonemal heavy chain 9 ISO (PMID:26909801)
(MGI:5514194|PMID:23525783)
GO_Central
MGI
PMID:23525783 PMID:26909801 MGI:5514194 NCBI chrNW_004936595:4,338,831...4,671,178 JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 ISO (MGI:5514194|PMID:23525783) MGI PMID:23525783 MGI:5514194 NCBI chrNW_004936524:2,551,431...2,614,245 JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 ISO (MGI:5514194|PMID:23525783) MGI PMID:23525783 MGI:5514194 NCBI chrNW_004936655:163,565...188,431 JBrowse link
G Dnali1 dynein axonemal light intermediate chain 1 ISO (PMID:26909801)
(MGI:6111002|PMID:29317443)
GO_Central
MGI
PMID:26909801 PMID:29317443 MGI:6111002 NCBI chrNW_004936474:19,779,731...19,787,860 JBrowse link
G Enkur enkurin, TRPC channel interacting protein ISO (PMID:29257953)
(MGI:6110984|PMID:29257953)
GO_Central
MGI
PMID:29257953 MGI:6110984 NCBI chrNW_004936484:679,541...700,898 JBrowse link
G Gas8 growth arrest specific 8 ISO (MGI:5789455|PMID:27472056), (MGI:6111002|PMID:29317443) MGI PMID:27472056 PMID:29317443 MGI:5789455 MGI:6111002 NCBI chrNW_004936641:92,893...109,006 JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 ISO (PMID:27486780)
(MGI:5913140|PMID:27486780)
GO_Central
MGI
PMID:27486780 MGI:5913140 NCBI chrNW_004936490:16,808,659...16,832,814 JBrowse link
G Rsph9 radial spoke head component 9 ISO (PMID:26909801) GO_Central PMID:26909801 NCBI chrNW_004936476:16,351,794...16,369,092 JBrowse link
G Spef1 sperm flagellar 1 ISO (MGI:6331463|PMID:30535028) UniProt PMID:30535028 MGI:6331463 NCBI chrNW_004936485:14,917,352...14,923,669 JBrowse link
axonemal basal plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift88 intraflagellar transport 88 ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chrNW_004936491:8,238,644...8,749,172 JBrowse link
axonemal central apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin HYDIN axonemal central pair apparatus protein ISO (MGI:6331463|PMID:30535028) UniProt PMID:30535028 MGI:6331463 NCBI chrNW_004936475:22,523,962...22,836,355 JBrowse link
G LOC101966632 sperm-associated antigen 16 protein ISO (MGI:3766863|PMID:17699735)
(MGI:2389554|PMID:12391165)
MGI PMID:12391165 PMID:17699735 MGI:2389554 MGI:3766863 NCBI chrNW_004936586:3,264,953...3,407,823 JBrowse link
G Spag17 sperm associated antigen 17 ISO (MGI:5576118|PMID:23418344)
(MGI:3807761|PMID:15827353)
MGI PMID:15827353 PMID:23418344 MGI:3807761 MGI:5576118 NCBI chrNW_004936627:3,002,893...3,201,294 JBrowse link
G Spef1 sperm flagellar 1 ISO (MGI:6331463|PMID:30535028) UniProt PMID:30535028 MGI:6331463 NCBI chrNW_004936485:14,917,352...14,923,669 JBrowse link
axonemal central pair projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin HYDIN axonemal central pair apparatus protein ISO (MGI:3793384|PMID:18250199) MGI PMID:18250199 MGI:3793384 NCBI chrNW_004936475:22,523,962...22,836,355 JBrowse link
axonemal dynein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap94 cilia and flagella associated protein 94 ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004936548:2,123,248...2,197,245 JBrowse link
G Dnah5 dynein axonemal heavy chain 5 ISO (MGI:2178772|PMID:11912187) MGI PMID:11912187 MGI:2178772 NCBI chrNW_004936665:2,267,272...2,545,765 JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 ISO (PMID:11153919) MGI PMID:11153919 NCBI chrNW_004936655:163,565...188,431 JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004936608:575,520...644,145 JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004936591:4,642,762...4,750,006 JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 ISO PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chrNW_004936514:5,172,752...5,262,823 JBrowse link
G Cep162 centrosomal protein 162 ISO (PMID:23644468) UniProtKB PMID:23644468 NCBI chrNW_004936510:6,793,695...6,874,600 JBrowse link
G Rpgrip1l RPGRIP1 like ISO RGD PMID:17558407 RGD:11537356 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 ISO (PMID:25673876) UniProtKB PMID:25673876 NCBI chrNW_004936652:885,616...915,113 JBrowse link
axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak8 adenylate kinase 8 ISO (MGI:5646278|PMID:24740601) MGI PMID:24740601 MGI:5646278 NCBI chrNW_004936487:19,212,155...19,321,601 JBrowse link
G Akap14 A-kinase anchoring protein 14 ISO (PMID:12475942) UniProtKB PMID:12475942 NCBI chrNW_004936479:10,051,669...10,055,518 JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936562:2,493,823...2,676,868 JBrowse link
G Arl13b ADP ribosylation factor like GTPase 13B ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004936666:115,964...179,639 JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 ISO (MGI:5925653|PMID:26455799) UniProt PMID:26455799 MGI:5925653 NCBI chrNW_004936600:3,190,212...3,229,831 JBrowse link
G Atg14 autophagy related 14 ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936495:155,709...195,860 JBrowse link
G Atg16l1 autophagy related 16 like 1 ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936525:3,973,574...4,010,442 JBrowse link
G Atg5 autophagy related 5 ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936564:2,759,085...2,885,394 JBrowse link
G Atg7 autophagy related 7 ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936602:1,938,720...2,179,239 JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 ISO (MGI:5588761|PMID:24833722) MGI PMID:24833722 MGI:5588761 NCBI chrNW_004936509:25,263...45,113 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO (MGI:5492028|PMID:22302990) MGI PMID:22302990 MGI:5492028 NCBI chrNW_004936662:1,081,237...1,116,719 JBrowse link
G Camsap3 calmodulin regulated spectrin associated protein family member 3 ISO (MGI:6436727|PMID:32482850) UniProt PMID:32482850 MGI:6436727 NCBI chrNW_004936588:4,660,664...4,669,836 JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO (PMID:21131972), (PMID:21131974), (PMID:26387594) UniProtKB PMID:21131972 PMID:21131974 PMID:26387594 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO (PMID:23255504) SYSCILIA_CCNET PMID:23255504 NCBI chrNW_004936594:4,075,105...4,124,850 JBrowse link
G Ccsap centriole, cilia and spindle associated protein ISO (PMID:22493317) UniProtKB PMID:22493317 NCBI chrNW_004936484:20,271,834...20,277,945 JBrowse link
G Cenpf centromere protein F ISO (MGI:5694347|PMID:25564561) MGI PMID:25564561 MGI:5694347 NCBI chrNW_004936628:3,642,281...3,695,262 JBrowse link
G Cfap206 cilia and flagella associated protein 206 ISO (MGI:6452763|PMID:32376681) UniProt PMID:32376681 MGI:6452763 NCBI chrNW_004936510:4,382,826...4,420,650 JBrowse link
G Cfap43 cilia and flagella associated protein 43 ISO (MGI:6402702|PMID:31884020) MGI PMID:31884020 MGI:6402702 NCBI chrNW_004936600:1,954,987...2,042,834 JBrowse link
G Cfap70 cilia and flagella associated protein 70 ISO (MGI:6383288|PMID:30158508) UniProt PMID:30158508 MGI:6383288 NCBI chrNW_004936521:5,680,846...5,785,818 JBrowse link
G Ctsh cathepsin H ISO RGD PMID:12838426 RGD:5686399 NCBI chrNW_004936471:37,135,200...37,156,081 JBrowse link
G Dcdc2 doublecortin domain containing 2 ISO (PMID:25557784), (PMID:27319779) UniProtKB PMID:25557784 PMID:27319779 NCBI chrNW_004936671:605,114...736,217 JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 ISO (PMID:18385425) UniProtKB PMID:18385425 NCBI chrNW_004936641:3,656,331...3,674,907 JBrowse link
G Dnah1 dynein axonemal heavy chain 1 ISO (PMID:24360805) UniProtKB PMID:24360805 NCBI chrNW_004936473:3,170,060...3,238,608 JBrowse link
G Dnah11 dynein axonemal heavy chain 11 ISO (PMID:31178125)
(MGI:6120222|PMID:26909801)
UniProt
MGI
PMID:26909801 PMID:31178125 MGI:6120222 NCBI chrNW_004936546:7,370,180...7,681,835 JBrowse link
G Dnah17 dynein axonemal heavy chain 17 ISO (PMID:31178125) UniProt PMID:31178125 NCBI chrNW_004936594:2,987,744...3,079,553 JBrowse link
G Dnah2 dynein axonemal heavy chain 2 ISO (PMID:31178125) UniProt PMID:31178125 NCBI chrNW_004936595:970,004...1,076,582 JBrowse link
G Dnah5 dynein axonemal heavy chain 5 ISO (PMID:15750039), (PMID:16492982), (PMID:18950741), (PMID:23849778), (PMID:24203976), (PMID:26387594), (PMID:26909801), (PMID:29916806), (PMID:31178125)
(MGI:5551687|PMID:23849778), (MGI:5607335|PMID:25192045), (MGI:6284218|PMID:29916806)
MGI PMID:15750039 PMID:16492982 PMID:18950741 PMID:23849778 PMID:24203976 PMID:25192045 PMID:26387594 PMID:26909801 PMID:29916806 PMID:31178125 MGI:5551687 MGI:5607335 MGI:6284218 NCBI chrNW_004936665:2,267,272...2,545,765 JBrowse link
G Dnah8 dynein axonemal heavy chain 8 ISO (PMID:31178125) UniProt PMID:31178125 NCBI chrNW_004936476:20,592,440...20,888,692 JBrowse link
G Dnah9 dynein axonemal heavy chain 9 ISO (PMID:11104725), (PMID:11839535), (PMID:15750039), (PMID:18950741), (PMID:23849778), (PMID:31178125) SYSCILIA_CCNET PMID:11104725 PMID:11839535 PMID:15750039 PMID:18950741 PMID:23849778 PMID:31178125 NCBI chrNW_004936595:4,338,831...4,671,178 JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 ISO (PMID:18950741), (PMID:23849778)
(MGI:6284218|PMID:29916806)
(PMID:11153919)
SYSCILIA_CCNET
MGI
PMID:11153919 PMID:18950741 PMID:23849778 PMID:29916806 MGI:6284218 NCBI chrNW_004936655:163,565...188,431 JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004936591:4,642,762...4,750,006 JBrowse link
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 ISO (MGI:3806784|PMID:18247331) MGI PMID:18247331 MGI:3806784 NCBI chrNW_004936498:3,042,151...3,055,966 JBrowse link
G Dnali1 dynein axonemal light intermediate chain 1 ISO (PMID:23849778), (PMID:26909801), (PMID:31178125)
(MGI:3628860|PMID:16496424), (MGI:6284218|PMID:29916806)
MGI PMID:16496424 PMID:23849778 PMID:26909801 PMID:29916806 PMID:31178125 MGI:3628860 MGI:6284218 NCBI chrNW_004936474:19,779,731...19,787,860 JBrowse link
G Drc3 dynein regulatory complex subunit 3 ISO (PMID:26387594) MGI PMID:26387594 NCBI chrNW_004936741:1,555,981...1,595,077 JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 ISO (MGI:5009180|PMID:12802074) BHF-UCL PMID:12802074 MGI:5009180 NCBI chrNW_004936551:4,584,438...4,913,829 JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 ISO (MGI:5551675|PMID:24183451) UniProt PMID:24183451 MGI:5551675 NCBI chrNW_004936487:16,142,659...16,157,929 JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ISO (MGI:5009180|PMID:12802074) BHF-UCL PMID:12802074 MGI:5009180 NCBI chrNW_004936508:8,119,733...8,149,022 JBrowse link
G Dynlt2b dynein light chain Tctex-type 2B colocalizes_with ISO (PMID:25830415) GO_Central PMID:25830415 NCBI chrNW_004936784:940,300...954,959 JBrowse link
G Dynlt4 dynein light chain Tctex-type 4 ISO (MGI:5510909|PMID:23789093) MGI PMID:23789093 MGI:5510909 NCBI chrNW_004936474:26,032,109...26,032,777 JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1 like ISO (MGI:6149643|PMID:29487109) MGI PMID:29487109 MGI:6149643 NCBI chrNW_004936540:437,638...469,945 JBrowse link
G Efhc1 EF-hand domain containing 1 ISO (MGI:3529636|PMID:15670853) UniProt PMID:15670853 MGI:3529636 NCBI chrNW_004936476:8,347,907...8,401,224 JBrowse link
G Gabarap GABA type A receptor-associated protein ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936595:534,042...536,289 JBrowse link
G Gas8 growth arrest specific 8 ISO (PMID:16643277), (PMID:26387594) UniProtKB PMID:16643277 PMID:26387594 NCBI chrNW_004936641:92,893...109,006 JBrowse link
G Gli1 GLI family zinc finger 1 ISO (MGI:3692156|PMID:16254602) CACAO PMID:16254602 MGI:3692156 NCBI chrNW_004936646:1,622,308...1,629,787 JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004936469:49,616,552...49,788,760 JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004936478:17,129,922...17,403,630 JBrowse link
G Gnat3 G protein subunit alpha transducin 3 ISO RGD PMID:17021831 RGD:2302145 NCBI chrNW_004936810:639,500...679,678 JBrowse link
G Ift140 intraflagellar transport 140 ISO (MGI:4460838|PMID:20368623), (MGI:5553228|PMID:23418020) UniProt PMID:20368623 PMID:23418020 MGI:4460838 MGI:5553228 NCBI chrNW_004936694:2,344,448...2,419,396 JBrowse link
G Ift57 intraflagellar transport 57 ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004936645:1,471,393...1,524,193 JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:2158985|PMID:11854326), (MGI:2664063|PMID:11251073), (MGI:3773480|PMID:18066062), (MGI:4460838|PMID:20368623), (MGI:5544506|PMID:24302887) MGI PMID:11251073 PMID:11854326 PMID:18066062 PMID:20368623 PMID:24302887 MGI:2158985 MGI:2664063 MGI:3773480 MGI:4460838 MGI:5544506 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E ISO (PMID:19668215)
(MGI:4359555|PMID:19668215)
UniProtKB
UniProt
PMID:19668215 MGI:4359555 NCBI chrNW_004936669:1,377,005...1,385,287 JBrowse link
G Kif17 kinesin family member 17 ISO (MGI:4353477|PMID:19384852) MGI PMID:19384852 MGI:4353477 NCBI chrNW_004936474:6,598,641...6,642,491 JBrowse link
G Kif3a kinesin family member 3A ISO RGD PMID:9920666 RGD:1581597 NCBI chrNW_004936647:2,461,017...2,502,550 JBrowse link
G Kifap3 kinesin associated protein 3 ISO (MGI:4353477|PMID:19384852) MGI PMID:19384852 MGI:4353477 NCBI chrNW_004936481:16,664,025...16,777,440 JBrowse link
G Lca5 lebercilin LCA5 ISO (MGI:5588761|PMID:24833722) MGI PMID:24833722 MGI:5588761 NCBI chrNW_004936510:10,652,378...10,702,761 JBrowse link
G LOC101966632 sperm-associated antigen 16 protein ISO (MGI:3052627|PMID:15328412), (MGI:3619868|PMID:16382026), (MGI:3844768|PMID:19305393) MGI PMID:15328412 PMID:16382026 PMID:19305393 MGI:3052627 MGI:3619868 MGI:3844768 NCBI chrNW_004936586:3,264,953...3,407,823 JBrowse link
G Mak male germ cell associated kinase ISO (MGI:5298333|PMID:21148103) MGI PMID:21148103 MGI:5298333 NCBI chrNW_004936534:2,170,853...2,239,647 JBrowse link
G Map4 microtubule associated protein 4 ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004936596:1,455,705...1,546,007 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 NOT ISO (PMID:29021280) UniProtKB PMID:29021280 NCBI chrNW_004936470:8,420,850...8,425,996 JBrowse link
G Mapt microtubule associated protein tau ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Mns1 meiosis specific nuclear structural 1 ISO (MGI:5318625|PMID:22396656) MGI PMID:22396656 MGI:5318625 NCBI chrNW_004936471:17,767,063...17,798,507 JBrowse link
G Nme8 NME/NM23 family member 8 ISO (MGI:2680785|PMID:12909633) ARUK-UCL PMID:12909633 MGI:2680785 NCBI chrNW_004936478:13,176,388...13,243,043 JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 ISO (PMID:25192045) SYSCILIA_CCNET PMID:25192045 NCBI chrNW_004936664:2,439,434...2,464,878 JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 ISO (PMID:23849778), (PMID:24203976) SYSCILIA_CCNET PMID:23849778 PMID:24203976 NCBI chrNW_004936613:2,155,624...2,316,168 JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 ISO (PMID:25192045) UniProtKB PMID:25192045 NCBI chrNW_004936659:1,491,598...1,501,245 JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 ISO (PMID:27486780) GO_Central PMID:27486780 NCBI chrNW_004936490:16,808,659...16,832,814 JBrowse link
G Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004936529:4,162,276...4,232,471 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha colocalizes_with ISO (PMID:12475942) UniProtKB PMID:12475942 NCBI chrNW_004936659:2,750,015...2,765,914 JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha colocalizes_with ISO (PMID:12475942) UniProtKB PMID:12475942 NCBI chrNW_004936541:7,845,876...7,863,677 JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha colocalizes_with ISO (PMID:12475942) UniProtKB PMID:12475942 NCBI chrNW_004936529:528,138...601,078 JBrowse link
G Rp1 RP1 axonemal microtubule associated ISO (MGI:2676521|PMID:14507858), (MGI:4460838|PMID:20368623), (MGI:4461813|PMID:20592197), (MGI:5588761|PMID:24833722), (MGI:6194004|PMID:29899041) MGI PMID:14507858 PMID:20368623 PMID:20592197 PMID:24833722 PMID:29899041 MGI:2676521 MGI:4460838 MGI:4461813 MGI:5588761 MGI:6194004 NCBI chrNW_004936496:1,396,838...1,411,082 JBrowse link
G Rp1l1 RP1 like 1 ISO (MGI:4353917|PMID:19657028) UniProt PMID:19657028 MGI:4353917 NCBI chrNW_004936675:2,527,406...2,564,464 JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (MGI:1933524|PMID:11104772) MGI PMID:11104772 MGI:1933524 NCBI chrNW_004936880:440,900...511,503 JBrowse link
G Rpgrip1l RPGRIP1 like ISO (PMID:17558409) MGI PMID:17558409 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
G Rsph4a radial spoke head component 4A ISO (PMID:23255504) SYSCILIA_CCNET PMID:23255504 NCBI chrNW_004937068:45,105...59,540 JBrowse link
G Rsph6a radial spoke head 6 homolog A ISO (MGI:6279049|PMID:30239614) UniProt PMID:30239614 MGI:6279049 NCBI chrNW_004936706:2,144,528...2,161,767 JBrowse link
G Rsph9 radial spoke head component 9 ISO (PMID:26909801)
(MGI:6451324|PMID:30383886)
GO_Central
UniProt
PMID:26909801 PMID:30383886 MGI:6451324 NCBI chrNW_004936476:16,351,794...16,369,092 JBrowse link
G Septin2 septin 2 ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004936745:518,650...555,187 JBrowse link
G Septin7 septin 7 ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004936478:11,419,334...11,528,954 JBrowse link
G Septin9 septin 9 ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004936594:2,213,459...2,286,582 JBrowse link
G Spag6 sperm associated antigen 6 ISO (PMID:10493827) GO_Central PMID:10493827 NCBI chrNW_004936520:5,628,576...5,693,590 JBrowse link
G Spata7 spermatogenesis associated 7 ISO (PMID:25398945) UniProtKB PMID:25398945 NCBI chrNW_004936488:15,878,167...15,911,301 JBrowse link
G Tmem67 transmembrane protein 67 colocalizes_with ISO RGD PMID:23516626 RGD:11535084 NCBI chrNW_004936544:6,887,867...6,931,669 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chrNW_004936525:115,614...174,641 JBrowse link
G Ttll10 tubulin tyrosine ligase like 10 ISO (MGI:3850271|PMID:19524510) UniProt PMID:19524510 MGI:3850271 NCBI chrNW_004936737:1,910,286...1,926,061 JBrowse link
G Ttll8 tubulin tyrosine ligase like 8 ISO (MGI:3850271|PMID:19524510) UniProt PMID:19524510 MGI:3850271 NCBI chrNW_004936629:720,842...766,247 JBrowse link
G Tubb4a tubulin beta 4A class IVa ISO (PMID:12475942) UniProtKB PMID:12475942 NCBI chrNW_004936588:3,821,171...3,826,827 JBrowse link
G Tulp3 TUB like protein 3 ISO (MGI:3841503|PMID:19286674) MGI PMID:19286674 MGI:3841503 NCBI chrNW_004936606:3,209,170...3,278,809 JBrowse link
G Wdr11 WD repeat domain 11 ISO (MGI:6116377|PMID:29263200) UniProt PMID:29263200 MGI:6116377 NCBI chrNW_004936486:10,007,728...10,061,640 JBrowse link
G Wdr35 WD repeat domain 35 ISO (MGI:4950635|PMID:21473986) UniProt PMID:21473986 MGI:4950635 NCBI chrNW_004936493:11,374,681...11,435,792 JBrowse link
BBSome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbip1 BBSome interacting protein 1 ISO (PMID:19081074) UniProtKB PMID:19081074 NCBI chrNW_004936486:1,707,367...1,723,481 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO (PMID:17574030), (PMID:20080638), (PMID:24550735)
(MGI:4420847|PMID:20080638), (MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:22072986 PMID:22500027 PMID:24550735 MGI:4420847 MGI:5296985 MGI:5467205 NCBI chrNW_004936599:3,059,274...3,076,853 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO (PMID:17574030), (PMID:24550735)
(MGI:4420847|PMID:20080638), (MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027), (MGI:5560383|PMID:24550735)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:22072986 PMID:22500027 PMID:24550735 MGI:4420847 MGI:5296985 MGI:5467205 MGI:5560383 NCBI chrNW_004936475:8,785,914...8,810,490 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (PMID:17574030), (PMID:20080638), (PMID:24550735)
(MGI:4420847|PMID:20080638), (MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:22072986 PMID:22500027 PMID:24550735 MGI:4420847 MGI:5296985 MGI:5467205 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 ISO (PMID:17574030), (PMID:20080638), (PMID:24550735)
(MGI:4839415|PMID:20603001), (MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027), (MGI:5560383|PMID:24550735)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:20603001 PMID:22072986 PMID:22500027 PMID:24550735 MGI:4839415 MGI:5296985 MGI:5467205 MGI:5560383 NCBI chrNW_004936509:25,263...45,113 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO (PMID:17574030), (PMID:20080638), (PMID:24550735)
(MGI:4420847|PMID:20080638), (MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027), (MGI:5560383|PMID:24550735)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:22072986 PMID:22500027 PMID:24550735 MGI:4420847 MGI:5296985 MGI:5467205 MGI:5560383 NCBI chrNW_004936662:1,081,237...1,116,719 JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 ISO (PMID:17574030), (PMID:20080638), (PMID:24550735)
(MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027), (MGI:5560383|PMID:24550735)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:22072986 PMID:22500027 PMID:24550735 MGI:5296985 MGI:5467205 MGI:5560383 NCBI chrNW_004936478:8,959,198...9,408,683 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (PMID:17574030), (PMID:20080638), (PMID:24550735)
(MGI:4420847|PMID:20080638), (MGI:5296985|PMID:22072986), (MGI:5467205|PMID:22500027), (MGI:5560383|PMID:24550735)
BHF-UCL
MGI
PMID:17574030 PMID:20080638 PMID:22072986 PMID:22500027 PMID:24550735 MGI:4420847 MGI:5296985 MGI:5467205 MGI:5560383 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
centriolar subdistal appendage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc120 coiled-coil domain containing 120 ISO (PMID:28422092) GO_Central PMID:28422092 NCBI chrNW_004936721:954,188...971,507 JBrowse link
G Ccdc68 coiled-coil domain containing 68 ISO (PMID:28422092) GO_Central PMID:28422092 NCBI chrNW_004936497:8,990,841...9,035,498 JBrowse link
G Cep128 centrosomal protein 128 ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936488:9,246,498...9,419,164 JBrowse link
G Cep170 centrosomal protein 170 ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936526:7,431,470...7,549,979 JBrowse link
G Cntrl centriolin ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936487:9,585,629...9,674,010 JBrowse link
G Dctn1 dynactin subunit 1 ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936556:601,550...632,321 JBrowse link
G Kif2a kinesin family member 2A ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936480:6,324,214...6,357,696 JBrowse link
G Nin ninein ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936495:14,791,246...14,897,454 JBrowse link
G Odf2 outer dense fiber of sperm tails 2 ISO (PMID:23213374) GO_Central PMID:23213374 NCBI chrNW_004936487:15,987,893...16,029,539 JBrowse link
ciliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl2 ATP/GTP binding protein like 2 ISO (PMID:23085998) UniProtKB PMID:23085998 NCBI chrNW_004936562:1,563,607...1,598,451 JBrowse link
G Ahi1 Abelson helper integration site 1 ISO (PMID:18633336)
(MGI:4360424|PMID:19625297), (MGI:4367647|PMID:19718039), (MGI:4437526|PMID:20081859)
UniProtKB
UniProt
PMID:18633336 PMID:19625297 PMID:19718039 PMID:20081859 MGI:4360424 MGI:4367647 MGI:4437526 NCBI chrNW_004936560:2,881,631...3,057,256 JBrowse link
G Akap9 A-kinase anchoring protein 9 ISO (MGI:5303017|PMID:22031837), (MGI:6209354|PMID:29891944) MGI PMID:22031837 PMID:29891944 MGI:5303017 MGI:6209354 NCBI chrNW_004936621:2,247,082...2,374,407 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:4361959|PMID:19596798) MGI PMID:19596798 MGI:4361959 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Alms1 ALMS1 centrosome and basal body associated protein ISO RGD PMID:21071598 RGD:8696019 NCBI chrNW_004936491:17,152,759...17,342,648 JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:5776638|PMID:26859289) UniProt PMID:26859289 MGI:5776638 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 ISO (MGI:5925653|PMID:26455799) UniProt PMID:26455799 MGI:5925653 NCBI chrNW_004936600:3,190,212...3,229,831 JBrowse link
G Armc9 armadillo repeat containing 9 ISO (PMID:28625504) UniProtKB PMID:28625504 NCBI chrNW_004936525:5,518,691...5,648,109 JBrowse link
G B9d1 B9 domain containing 1 ISO (PMID:19208769) UniProtKB PMID:19208769 NCBI chrNW_004936881:396,930...411,059 JBrowse link
G B9d2 B9 domain containing 2 ISO (PMID:19208769) UniProtKB PMID:19208769 NCBI chrNW_004936661:3,759,031...3,765,361 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO (PMID:18299575) BHF-UCL PMID:18299575 NCBI chrNW_004936475:8,785,914...8,810,490 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (PMID:15107855), (PMID:18299575) BHF-UCL PMID:15107855 PMID:18299575 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 ISO (MGI:3793926|PMID:15137946) BHF-UCL PMID:15137946 MGI:3793926 NCBI chrNW_004936509:25,263...45,113 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO (MGI:5492028|PMID:22302990) MGI PMID:22302990 MGI:5492028 NCBI chrNW_004936662:1,081,237...1,116,719 JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chrNW_004936498:3,099,419...3,242,334 JBrowse link
G Camsap2 calmodulin regulated spectrin associated protein family member 2 ISO (MGI:6436727|PMID:32482850) UniProt PMID:32482850 MGI:6436727 NCBI chrNW_004936567:3,497,304...3,590,967 JBrowse link
G Camsap3 calmodulin regulated spectrin associated protein family member 3 ISO (MGI:6436727|PMID:32482850) UniProt PMID:32482850 MGI:6436727 NCBI chrNW_004936588:4,660,664...4,669,836 JBrowse link
G Cby1 chibby family member 1, beta catenin antagonist ISO (MGI:3840551|PMID:19364920), (MGI:6201934|PMID:22508513) MGI PMID:19364920 PMID:22508513 MGI:3840551 MGI:6201934 NCBI chrNW_004936492:2,677,502...2,681,845 JBrowse link
G Ccdc113 coiled-coil domain containing 113 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936475:10,113,529...10,135,841 JBrowse link
G Ccdc170 coiled-coil domain containing 170 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936489:4,387,662...4,451,789 JBrowse link
G Ccdc178 coiled-coil domain containing 178 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936682:117,455...459,368 JBrowse link
G Ccdc65 coiled-coil domain containing 65 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936512:6,720,846...6,731,955 JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (PMID:28235840) UniProtKB PMID:28235840 NCBI chrNW_004936473:7,027,543...7,054,079 JBrowse link
G Ccdc88a coiled-coil domain containing 88A ISO (PMID:27623382) UniProtKB PMID:27623382 NCBI chrNW_004936491:1,670,192...1,804,056 JBrowse link
G Ccsap centriole, cilia and spindle associated protein ISO (PMID:22493317) UniProtKB PMID:22493317 NCBI chrNW_004936484:20,271,834...20,277,945 JBrowse link
G Cdc45 cell division cycle 45 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936619:3,420,110...3,452,419 JBrowse link
G Cdk10 cyclin dependent kinase 10 ISO (PMID:27104747) UniProtKB PMID:27104747 NCBI chrNW_004936641:351,905...359,553 JBrowse link
G Cdkl5 cyclin dependent kinase like 5 ISO (PMID:29420175) UniProtKB PMID:29420175 NCBI chrNW_004936844:101,815...271,254 JBrowse link
G Cenpf centromere protein F ISO (MGI:5694347|PMID:25564561) MGI PMID:25564561 MGI:5694347 NCBI chrNW_004936628:3,642,281...3,695,262 JBrowse link
G Cenpj centromere protein J ISO (MGI:5426535|PMID:23213448) MGI PMID:23213448 MGI:5426535 NCBI chrNW_004936720:2,149,296...2,201,599 JBrowse link
G Cep131 centrosomal protein 131 ISO (PMID:27224062) UniProt PMID:27224062 NCBI chrNW_004936594:4,914,174...4,938,364 JBrowse link
G Cep19 centrosomal protein 19 ISO (PMID:24268657), (PMID:28428259), (PMID:28659385) UniProtKB PMID:24268657 PMID:28428259 PMID:28659385 NCBI chrNW_004936784:1,284,215...1,289,362 JBrowse link
G Cep20 centrosomal protein 20 ISO (MGI:5009352|PMID:20551181) UniProt PMID:20551181 MGI:5009352 NCBI chrNW_004936501:3,320,671...3,333,705 JBrowse link
G Cep250 centrosomal protein 250 ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chrNW_004936561:5,283,258...5,331,688 JBrowse link
G Cep290 centrosomal protein 290 ISO RGD PMID:17558407 PMID:22940612 RGD:11537356 RGD:8553427 NCBI chrNW_004936507:5,223,756...5,305,392 JBrowse link
G Cep41 centrosomal protein 41 ISO (PMID:22246503)
(MGI:5309044|PMID:22246503)
UniProtKB
UniProt
PMID:22246503 MGI:5309044 NCBI chrNW_004936579:4,847,137...4,890,478 JBrowse link
G Cetn2 centrin 2 ISO (MGI:3525432|PMID:15347651), (MGI:4437526|PMID:20081859), (MGI:6209354|PMID:29891944) MGI PMID:15347651 PMID:20081859 PMID:29891944 MGI:3525432 MGI:4437526 MGI:6209354 NCBI chrNW_004936714:274,098...279,177 JBrowse link
G Cetn3 centrin 3 ISO (MGI:3525432|PMID:15347651), (MGI:5588761|PMID:24833722) MGI PMID:15347651 PMID:24833722 MGI:3525432 MGI:5588761 NCBI chrNW_004936469:8,501,572...8,516,722 JBrowse link
G Cfap100 cilia and flagella associated protein 100 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936898:542,581...553,484 JBrowse link
G Cfap126 cilia and flagella associated protein 126 ISO (MGI:5607445|PMID:25296022) UniProt PMID:25296022 MGI:5607445 NCBI chrNW_004936903:638,391...642,241 JBrowse link
G Cfap157 cilia and flagella associated protein 157 ISO (MGI:5812811|PMID:27965440) UniProt PMID:27965440 MGI:5812811 NCBI chrNW_004936487:15,383,428...15,389,831 JBrowse link
G Cfap20 cilia and flagella associated protein 20 ISO (PMID:20118210) UniProtKB PMID:20118210 NCBI chrNW_004936475:10,011,671...10,023,643 JBrowse link
G Cfap206 cilia and flagella associated protein 206 ISO (MGI:6452763|PMID:32376681) UniProt PMID:32376681 MGI:6452763 NCBI chrNW_004936510:4,382,826...4,420,650 JBrowse link
G Cfap410 cilia and flagella associated protein 410 ISO (PMID:26167768), (PMID:26294103)
(MGI:5700130|PMID:26167768), (MGI:6194004|PMID:29899041)
UniProtKB
UniProt
PMID:26167768 PMID:26294103 PMID:29899041 MGI:5700130 MGI:6194004 NCBI chrNW_004936500:82,702...90,525 JBrowse link
G Cfap70 cilia and flagella associated protein 70 ISO (PMID:31621862) UniProt PMID:31621862 NCBI chrNW_004936521:5,680,846...5,785,818 JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 ISO (MGI:5819324|PMID:27528616) UniProt PMID:27528616 MGI:5819324 NCBI chrNW_004936544:6,848,026...6,868,522 JBrowse link
G Cibar2 CBY1 interacting BAR domain containing 2 ISO (MGI:5819324|PMID:27528616) UniProt PMID:27528616 MGI:5819324 NCBI chrNW_004936641:3,099,616...3,109,969 JBrowse link
G Cilk1 ciliogenesis associated kinase 1 ISO (MGI:5575814|PMID:24853502) UniProt PMID:24853502 MGI:5575814 NCBI chrNW_004936476:7,830,714...7,869,533 JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 ISO (MGI:5617062|PMID:25644602) UniProt PMID:25644602 MGI:5617062 NCBI chrNW_004936504:5,351,354...5,394,856 JBrowse link
G Csnk1d casein kinase 1 delta ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936594:5,720,887...5,743,206 JBrowse link
G CUNH11orf97 chromosome unknown C11orf97 homolog ISO (MGI:5883143|PMID:27914912)
(MGI:6093483|PMID:28666954)
UniProt PMID:27914912 PMID:28666954 MGI:5883143 MGI:6093483 NCBI chrNW_004936674:435,673...452,150 JBrowse link
G CUNH5orf49 chromosome unknown C5orf49 homolog ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936643:342,292...359,984 JBrowse link
G Cyld CYLD lysine 63 deubiquitinase ISO (MGI:5607344|PMID:25134987) UniProt PMID:25134987 MGI:5607344 NCBI chrNW_004936475:3,750,917...3,812,118 JBrowse link
G Daam1 dishevelled associated activator of morphogenesis 1 ISO (PMID:26644512) UniProtKB PMID:26644512 NCBI chrNW_004936495:3,591,611...3,757,646 JBrowse link
G Dctn1 dynactin subunit 1 ISO (MGI:3720992|PMID:17600711) MGI PMID:17600711 MGI:3720992 NCBI chrNW_004936556:601,550...632,321 JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 ISO (MGI:5617062|PMID:25644602) UniProt PMID:25644602 MGI:5617062 NCBI chrNW_004936521:1,649,557...1,753,149 JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 ISO (PMID:25205765)
(MGI:5551675|PMID:24183451)
UniProt PMID:24183451 PMID:25205765 MGI:5551675 NCBI chrNW_004936487:16,142,659...16,157,929 JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ISO (PMID:26130459) UniProtKB PMID:26130459 NCBI chrNW_004936508:8,119,733...8,149,022 JBrowse link
G Dzip1 DAZ interacting zinc finger protein 1 ISO (PMID:19852954)
(MGI:5554981|PMID:23955340)
BHF-UCL
MGI
PMID:19852954 PMID:23955340 MGI:5554981 NCBI chrNW_004936472:14,141,502...14,205,543 JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1 like ISO (PMID:19852954), (PMID:28530676)
(MGI:6149643|PMID:29487109)
BHF-UCL
MGI
PMID:19852954 PMID:28530676 PMID:29487109 MGI:6149643 NCBI chrNW_004936540:437,638...469,945 JBrowse link
G Efhc2 EF-hand domain containing 2 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936502:10,279,094...10,456,994 JBrowse link
G Entr1 endosome associated trafficking regulator 1 ISO (PMID:27767179) UniProtKB PMID:27767179 NCBI chrNW_004936669:1,396,733...1,403,927 JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 ISO (PMID:27224062) UniProt PMID:27224062 NCBI chrNW_004936606:1,201,420...1,713,894 JBrowse link
G Evc EvC ciliary complex subunit 1 ISO (MGI:3720528|PMID:17660199) UniProt PMID:17660199 MGI:3720528 NCBI chrNW_004936477:17,940,792...17,992,996 JBrowse link
G Ezr ezrin ISO (MGI:3037476|PMID:14996907) MGI PMID:14996907 MGI:3037476 NCBI chrNW_004936489:10,413,374...10,457,771 JBrowse link
G Fam161a FAM161 centrosomal protein A colocalizes_with ISO (MGI:5438885|PMID:22791751), (MGI:5588761|PMID:24833722)
PMID:22940612
(PMID:22791751), (PMID:22940612)
RGD
UniProt
UniProtKB
PMID:22791751 PMID:22940612 PMID:24833722 MGI:5438885 MGI:5588761 RGD:8553427 NCBI chrNW_004936491:7,202,877...7,221,493 JBrowse link
G Fam166a family with sequence similarity 166 member A ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936669:746,530...749,225 JBrowse link
G Fank1 fibronectin type III and ankyrin repeat domains 1 ISO (MGI:5883143|PMID:27914912) UniProt PMID:27914912 MGI:5883143 NCBI chrNW_004936486:13,935,713...13,955,129 JBrowse link
G Gas2l2 growth arrest specific 2 like 2 colocalizes_with ISO (PMID:30665704)
(MGI:6330843|PMID:30665704)
UniProt PMID:30665704 MGI:6330843 NCBI chrNW_004936490:144,824...153,790 JBrowse link
G Gas8 growth arrest specific 8 ISO (MGI:5784989|PMID:16643277), (MGI:6148647|PMID:21659505) UniProt PMID:16643277 PMID:21659505 MGI:5784989 MGI:6148647 NCBI chrNW_004936641:92,893...109,006 JBrowse link
G Gle1 GLE1 RNA export mediator ISO (PMID:28035044) CACAO PMID:28035044 NCBI chrNW_004936487:16,031,832...16,063,779 JBrowse link
G Ift122 intraflagellar transport 122 ISO (PMID:29220510)
(MGI:4888042|PMID:21209331)
UniProt
BHF-UCL
PMID:21209331 PMID:29220510 MGI:4888042 NCBI chrNW_004936602:908,034...956,634 JBrowse link
G Ift140 intraflagellar transport 140 ISO (PMID:22503633)
(MGI:5553228|PMID:23418020), (MGI:5554981|PMID:23955340), (MGI:5604762|PMID:24619649)
UniProtKB
MGI
PMID:22503633 PMID:23418020 PMID:23955340 PMID:24619649 MGI:5553228 MGI:5554981 MGI:5604762 NCBI chrNW_004936694:2,344,448...2,419,396 JBrowse link
G Ift20 intraflagellar transport 20 ISO (MGI:5303017|PMID:22031837) MGI PMID:22031837 MGI:5303017 NCBI chrNW_004936538:4,484,484...4,491,688 JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chrNW_004936530:2,965,587...3,003,758 JBrowse link
G Ift57 intraflagellar transport 57 ISO (MGI:3794027|PMID:17931679), (MGI:5554981|PMID:23955340) MGI PMID:17931679 PMID:23955340 MGI:3794027 MGI:5554981 NCBI chrNW_004936645:1,471,393...1,524,193 JBrowse link
G Ift80 intraflagellar transport 80 ISO (MGI:5807019|PMID:26996322) MGI PMID:26996322 MGI:5807019 NCBI chrNW_004936708:238,302...362,537 JBrowse link
G Ift81 intraflagellar transport 81 ISO (PMID:23990561) CACAO PMID:23990561 NCBI chrNW_004936558:3,177,418...3,251,439 JBrowse link
G Ift88 intraflagellar transport 88 ISO (PMID:27767179), (PMID:28428259), (PMID:28625565)
(MGI:2158985|PMID:11854326), (MGI:2664063|PMID:11251073), (MGI:4457459|PMID:20230748), (MGI:5554981|PMID:23955340)
UniProtKB
MGI
PMID:11251073 PMID:11854326 PMID:20230748 PMID:23955340 PMID:27767179 PMID:28428259 PMID:28625565 MGI:2158985 MGI:2664063 MGI:4457459 MGI:5554981 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Intu inturned planar cell polarity protein ISO (PMID:26644512) UniProtKB PMID:26644512 NCBI chrNW_004936642:2,950,197...3,025,079 JBrowse link
G Iqcd IQ motif containing D ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936668:3,084,869...3,110,673 JBrowse link
G Irs1 insulin receptor substrate 1 ISO (MGI:4361959|PMID:19596798) MGI PMID:19596798 MGI:4361959 NCBI chrNW_004936525:9,064,442...9,125,972 JBrowse link
G Jade1 jade family PHD finger 1 ISO (PMID:22654112) UniProtKB PMID:22654112 NCBI chrNW_004936642:2,154,662...2,207,186 JBrowse link
G Kiaa0586 KIAA0586 ortholog ISO (PMID:24421332) MGI PMID:24421332 NCBI chrNW_004936495:2,799,738...2,933,157 JBrowse link
G Kif17 kinesin family member 17 ISO (MGI:4353477|PMID:19384852) MGI PMID:19384852 MGI:4353477 NCBI chrNW_004936474:6,598,641...6,642,491 JBrowse link
G Kif7 kinesin family member 7 ISO (MGI:5617062|PMID:25644602) UniProt PMID:25644602 MGI:5617062 NCBI chrNW_004936483:15,430,735...15,450,872 JBrowse link
G Kifap3 kinesin associated protein 3 ISO (MGI:4353477|PMID:19384852) MGI PMID:19384852 MGI:4353477 NCBI chrNW_004936481:16,664,025...16,777,440 JBrowse link
G Kncn kinocilin ISO (MGI:3576794|PMID:15855039) MGI PMID:15855039 MGI:3576794 NCBI chrNW_004936474:27,559,270...27,562,193 JBrowse link
G Lca5 lebercilin LCA5 ISO PMID:17546029
(MGI:5588761|PMID:24833722)
UniProt
MGI
PMID:17546029 PMID:24833722 MGI:5588761 RGD:14397561 NCBI chrNW_004936510:10,652,378...10,702,761 JBrowse link
G LOC101958440 cytosolic carboxypeptidase 6 ISO (PMID:23085998) UniProtKB PMID:23085998 NCBI chrNW_004936474:29,407,786...29,533,981 JBrowse link
G LOC101959679 disrupted in schizophrenia 1 protein ISO (MGI:5303017|PMID:22031837) MGI PMID:22031837 MGI:5303017 NCBI chrNW_004936484:19,151,752...19,237,435 JBrowse link
G LOC101964565 TBC1 domain family member 7 ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936534:8,104...17,056 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO (PMID:29021280) UniProtKB PMID:29021280 NCBI chrNW_004936470:8,420,850...8,425,996 JBrowse link
G Mapre1 microtubule associated protein RP/EB family member 1 ISO (MGI:3720992|PMID:17600711) MGI PMID:17600711 MGI:3720992 NCBI chrNW_004936485:19,577,859...19,608,036 JBrowse link
G Mark4 microtubule affinity regulating kinase 4 ISO (PMID:23400999) CACAO PMID:23400999 NCBI chrNW_004936706:1,764,239...1,789,745 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:5424301|PMID:22446187) MGI PMID:22446187 MGI:5424301 NCBI chrNW_004936485:9,089,118...9,114,396 JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO (PMID:19208769), (PMID:19515853) UniProtKB PMID:19208769 PMID:19515853 NCBI chrNW_004936490:4,865,243...4,876,601 JBrowse link
G Mlf1 myeloid leukemia factor 1 ISO (MGI:5883143|PMID:27914912) UniProt PMID:27914912 MGI:5883143 NCBI chrNW_004936519:5,208,288...5,241,375 JBrowse link
G Nedd1 NEDD1 gamma-tubulin ring complex targeting factor ISO (MGI:3790380|PMID:18239929) MGI PMID:18239929 MGI:3790380 NCBI chrNW_004936677:2,954,738...2,963,072 JBrowse link
G Nek4 NIMA related kinase 4 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936473:3,499,858...3,527,918 JBrowse link
G Nme7 NME/NM23 family member 7 ISO (MGI:5317033|PMID:21289087) MGI PMID:21289087 MGI:5317033 NCBI chrNW_004936481:17,280,661...17,438,496 JBrowse link
G Nphp4 nephrocystin 4 ISO RGD PMID:17558407 RGD:11537356 NCBI chrNW_004936623:802,152...904,198 JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 ISO (MGI:5607398|PMID:24067530) UniProt PMID:24067530 MGI:5607398 NCBI chrNW_004936659:1,491,598...1,501,245 JBrowse link
G Odf2 outer dense fiber of sperm tails 2 ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936487:15,987,893...16,029,539 JBrowse link
G Odf2l outer dense fiber of sperm tails 2 like ISO (PMID:17485331) UniProtKB PMID:17485331 NCBI chrNW_004936865:252,865...290,595 JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein ISO (PMID:20230748)
(MGI:4457459|PMID:20230748)
UniProtKB
UniProt
PMID:20230748 MGI:4457459 NCBI chrNW_004936470:3,292,961...3,331,915 JBrowse link
G Pcm1 pericentriolar material 1 ISO (MGI:5303017|PMID:22031837) MGI PMID:22031837 MGI:5303017 NCBI chrNW_004936554:7,906...86,187 JBrowse link
G Pcnt pericentrin ISO (MGI:3053250|PMID:15337773), (MGI:3720992|PMID:17600711), (MGI:5303017|PMID:22031837) MGI PMID:15337773 PMID:17600711 PMID:22031837 MGI:3053250 MGI:3720992 MGI:5303017 NCBI chrNW_004936778:149,844...248,905 JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936659:309,530...321,294 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:15337773)
(MGI:5303017|PMID:22031837)
MGI PMID:15337773 PMID:22031837 MGI:5303017 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO (PMID:14978161), (PMID:14983006) UniProtKB PMID:14978161 PMID:14983006 NCBI chrNW_004936476:8,730,766...9,160,102 JBrowse link
G Poc1a POC1 centriolar protein A ISO (PMID:20008567) UniProtKB PMID:20008567 NCBI chrNW_004936529:3,423,588...3,495,698 JBrowse link
G Poc1b POC1 centriolar protein B ISO (PMID:20008567) UniProtKB PMID:20008567 NCBI chrNW_004936507:6,375,009...6,457,034 JBrowse link
G Ppp1r32 protein phosphatase 1 regulatory subunit 32 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936581:1,577,735...1,584,325 JBrowse link
G Psen2 presenilin 2 ISO (MGI:5013962|PMID:21703454) MGI PMID:21703454 MGI:5013962 NCBI chrNW_004936526:3,584,194...3,611,719 JBrowse link
G Psmb4 proteasome 20S subunit beta 4 ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936580:1,610,635...1,613,357 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (PMID:31630787) UniProt PMID:31630787 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
G Ptpn23 protein tyrosine phosphatase non-receptor type 23 ISO (PMID:20393563) UniProtKB PMID:20393563 NCBI chrNW_004936596:1,094,285...1,124,483 JBrowse link
G Rab28 RAB28, member RAS oncogene family ISO PMID:23746546 UniProt PMID:23746546 RGD:8554122 NCBI chrNW_004936477:14,066,063...14,140,310 JBrowse link
G Rab8a RAB8A, member RAS oncogene family ISO (MGI:4360424|PMID:19625297) MGI PMID:19625297 MGI:4360424 NCBI chrNW_004936596:4,385,788...4,403,393 JBrowse link
G Rabep2 rabaptin, RAB GTPase binding effector protein 2 ISO (PMID:27224062) UniProt PMID:27224062 NCBI chrNW_004936501:11,807,369...11,818,350 JBrowse link
G Rabl2b RAB, member of RAS oncogene family like 2B ISO (PMID:28428259), (PMID:28625565) UniProtKB PMID:28428259 PMID:28625565 NCBI chrNW_004936629:60,924...75,273 JBrowse link
G Rp2 RP2 activator of ARL3 GTPase ISO (PMID:20106869), (PMID:26455799)
(MGI:4437382|PMID:20106869)
MGI PMID:20106869 PMID:26455799 MGI:4437382 NCBI chrNW_004936502:12,656,187...12,701,689 JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO (MGI:3607627|PMID:16043481) UniProt PMID:16043481 MGI:3607627 NCBI chrNW_004936502:5,163,164...5,212,940 JBrowse link
G Rpgrip1l RPGRIP1 like ISO (PMID:17558409)
(MGI:3715393|PMID:17553904)
MGI
RGD
PMID:17553904 PMID:17558407 PMID:17558409 MGI:3715393 RGD:11537356 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
G Rttn rotatin ISO (PMID:22939636) UniProtKB PMID:22939636 NCBI chrNW_004936964:1,369...71,142 JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 ISO (PMID:25673876) UniProtKB PMID:25673876 NCBI chrNW_004936652:885,616...915,113 JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chrNW_004936526:7,202,147...7,431,455 JBrowse link
G Spaca9 sperm acrosome associated 9 ISO (MGI:5883143|PMID:27914912) UniProt PMID:27914912 MGI:5883143 NCBI chrNW_004936487:19,322,207...19,331,434 JBrowse link
G Spata7 spermatogenesis associated 7 ISO (PMID:25398945) UniProtKB PMID:25398945 NCBI chrNW_004936488:15,878,167...15,911,301 JBrowse link
G Ssna1 SS nuclear autoantigen 1 ISO (MGI:5317033|PMID:21289087) MGI PMID:21289087 MGI:5317033 NCBI chrNW_004936669:795,929...797,422 JBrowse link
G Ssx2ip SSX family member 2 interacting protein ISO (PMID:24356449)
(MGI:5607393|PMID:24356449)
UniProtKB
UniProt
PMID:24356449 MGI:5607393 NCBI chrNW_004936608:958,991...995,821 JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 ISO (PMID:26365339) UniProtKB PMID:26365339 NCBI chrNW_004936477:11,777,657...11,823,296 JBrowse link
G Tbata thymus, brain and testes associated ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chrNW_004936521:7,926,509...7,934,923 JBrowse link
G Tbc1d30 TBC1 domain family member 30 ISO (PMID:17646400) UniProtKB PMID:17646400 NCBI chrNW_004936545:3,075,135...3,117,750 JBrowse link
G Togaram1 TOG array regulator of axonemal microtubules 1 ISO (MGI:5796072|PMID:26378256) UniProt PMID:26378256 MGI:5796072 NCBI chrNW_004936583:4,213,853...4,298,916 JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ISO (PMID:21159800)
(MGI:4939557|PMID:21159800)
BHF-UCL PMID:21159800 MGI:4939557 NCBI chrNW_004936524:1,219,101...1,229,937 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chrNW_004936525:115,614...174,641 JBrowse link
G Ttbk2 tau tubulin kinase 2 ISO (MGI:5493390|PMID:23141541) UniProt PMID:23141541 MGI:5493390 NCBI chrNW_004936471:6,003,294...6,108,677 JBrowse link
G Ttc26 tetratricopeptide repeat domain 26 ISO (MGI:5448494|PMID:22718903), (MGI:5607391|PMID:24596149) MGI PMID:22718903 PMID:24596149 MGI:5448494 MGI:5607391 NCBI chrNW_004936592:3,402,950...3,468,174 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (PMID:14520415) BHF-UCL PMID:14520415 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936718:869,901...884,708 JBrowse link
G Ttll11 tubulin tyrosine ligase like 11 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936487:10,263,865...10,495,897 JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936569:1,153,376...1,201,704 JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936488:4,723,314...4,983,926 JBrowse link
G Ttll6 tubulin tyrosine ligase like 6 ISO (PMID:22246503)
(MGI:3771321|PMID:17499049)
UniProtKB
MGI
PMID:17499049 PMID:22246503 MGI:3771321 NCBI chrNW_004936490:12,625,977...12,652,318 JBrowse link
G Ttll7 tubulin tyrosine ligase like 7 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936608:1,534,847...1,675,997 JBrowse link
G Ttll9 tubulin tyrosine ligase like 9 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chrNW_004936485:18,835,494...18,880,673 JBrowse link
G Tubg1 tubulin gamma 1 ISO (MGI:4461813|PMID:20592197) MGI PMID:20592197 MGI:4461813 NCBI chrNW_004936490:17,357,782...17,363,006 JBrowse link
G Ush1g USH1 protein network component sans ISO (MGI:3774983|PMID:17906286) MGI PMID:17906286 MGI:3774983 NCBI chrNW_004936594:258,115...262,739 JBrowse link
G Ush2a usherin ISO (MGI:3774983|PMID:17906286) MGI PMID:17906286 MGI:3774983 NCBI chrNW_004936628:2,123,917...2,859,958 JBrowse link
G Wdr11 WD repeat domain 11 ISO (PMID:29263200)
(MGI:6116377|PMID:29263200)
UniProt PMID:29263200 MGI:6116377 NCBI chrNW_004936486:10,007,728...10,061,640 JBrowse link
G Wdr35 WD repeat domain 35 ISO (MGI:4950635|PMID:21473986) UniProt PMID:21473986 MGI:4950635 NCBI chrNW_004936493:11,374,681...11,435,792 JBrowse link
G Whrn whirlin ISO (MGI:3774983|PMID:17906286) MGI PMID:17906286 MGI:3774983 NCBI chrNW_004936487:3,668,465...3,748,234 JBrowse link
G Wrap73 WD repeat containing, antisense to TP73 ISO (PMID:26545777) UniProtKB PMID:26545777 NCBI chrNW_004936737:238,615...253,495 JBrowse link
ciliary base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep126 centrosomal protein 126 ISO (PMID:24867236) UniProtKB PMID:24867236 NCBI chrNW_004936551:5,843,852...5,917,028 JBrowse link
G Cfap36 cilia and flagella associated protein 36 ISO (MGI:5925653|PMID:26455799) UniProt PMID:26455799 MGI:5925653 NCBI chrNW_004936491:1,884,071...1,915,127 JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 ISO (PMID:27528616) UniProtKB PMID:27528616 NCBI chrNW_004936544:6,848,026...6,868,522 JBrowse link
G Cilk1 ciliogenesis associated kinase 1 ISO (MGI:5787768|PMID:25243405) UniProt PMID:25243405 MGI:5787768 NCBI chrNW_004936476:7,830,714...7,869,533 JBrowse link
G Cluap1 clusterin associated protein 1 ISO (MGI:5509110|PMID:23742838) MGI PMID:23742838 MGI:5509110 NCBI chrNW_004936694:779,399...810,534 JBrowse link
G CUNH11orf97 chromosome unknown C11orf97 homolog ISO (MGI:5883143|PMID:27914912) MGI PMID:27914912 MGI:5883143 NCBI chrNW_004936674:435,673...452,150 JBrowse link
G CUNH8orf37 chromosome unknown C8orf37 homolog ISO (PMID:22177090) UniProtKB PMID:22177090 NCBI chrNW_004936544:8,170,841...8,192,896 JBrowse link
G Disc1 DISC1 scaffold protein ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004936484:19,056,143...19,072,062 JBrowse link
G Dnali1 dynein axonemal light intermediate chain 1 ISO (MGI:6111002|PMID:29317443) MGI PMID:29317443 MGI:6111002 NCBI chrNW_004936474:19,779,731...19,787,860 JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 colocalizes_with ISO (PMID:23910462)
(PMID:25830415)
GO_Central PMID:23910462 PMID:25830415 NCBI chrNW_004936856:724,863...792,490 JBrowse link
G Dynlt2b dynein light chain Tctex-type 2B colocalizes_with ISO (PMID:25830415) GO_Central PMID:25830415 NCBI chrNW_004936784:940,300...954,959 JBrowse link
G Enkd1 enkurin domain containing 1 ISO (MGI:6110984|PMID:29257953) MGI PMID:29257953 MGI:6110984 NCBI chrNW_004936475:18,055,005...18,058,925 JBrowse link
G Fank1 fibronectin type III and ankyrin repeat domains 1 ISO (MGI:5883143|PMID:27914912) MGI PMID:27914912 MGI:5883143 NCBI chrNW_004936486:13,935,713...13,955,129 JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004936602:908,034...956,634 JBrowse link
G Ift20 intraflagellar transport 20 ISO (MGI:3053250|PMID:15337773) MGI PMID:15337773 MGI:3053250 NCBI chrNW_004936538:4,484,484...4,491,688 JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:3689465|PMID:16775004) MGI PMID:16775004 MGI:3689465 NCBI chrNW_004936530:2,965,587...3,003,758 JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:3689465|PMID:16775004), (MGI:4361064|PMID:19654211), (MGI:5285455|PMID:21653639) MGI PMID:16775004 PMID:19654211 PMID:21653639 MGI:3689465 MGI:4361064 MGI:5285455 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Invs inversin ISO (MGI:5578232|PMID:20169535) MGI PMID:20169535 MGI:5578232 NCBI chrNW_004936524:8,470,958...8,612,835 JBrowse link
G Mlf1 myeloid leukemia factor 1 ISO (MGI:5883143|PMID:27914912) MGI PMID:27914912 MGI:5883143 NCBI chrNW_004936519:5,208,288...5,241,375 JBrowse link
G Mok MOK protein kinase ISO (MGI:5787768|PMID:25243405) UniProt PMID:25243405 MGI:5787768 NCBI chrNW_004936835:432,403...479,605 JBrowse link
G Nek8 NIMA related kinase 8 ISO (MGI:5578232|PMID:20169535) MGI PMID:20169535 MGI:5578232 NCBI chrNW_004936538:4,938,739...4,952,083 JBrowse link
G Nphp3 nephrocystin 3 ISO (MGI:5578232|PMID:20169535) MGI PMID:20169535 MGI:5578232 NCBI chrNW_004936529:6,013,321...6,048,249 JBrowse link
G Nphp4 nephrocystin 4 ISO (MGI:5578232|PMID:20169535) MGI PMID:20169535 MGI:5578232 NCBI chrNW_004936623:802,152...904,198 JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 ISO (PMID:23849778) MGI PMID:23849778 NCBI chrNW_004936613:2,155,624...2,316,168 JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO RGD PMID:23994472 RGD:9685166 NCBI chrNW_004936721:825,171...830,010 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO (MGI:5308523|PMID:22007132) MGI PMID:22007132 MGI:5308523 NCBI chrNW_004936659:2,750,015...2,765,914 JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta ISO (MGI:5308523|PMID:22007132) MGI PMID:22007132 MGI:5308523 NCBI chrNW_004936608:1,353,905...1,464,636 JBrowse link
G Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta ISO (MGI:5308523|PMID:22007132) MGI PMID:22007132 MGI:5308523 NCBI chrNW_004936479:16,894,068...16,988,879 JBrowse link
G Rab8a RAB8A, member RAS oncogene family ISO (MGI:5696765|PMID:24947469) MGI PMID:24947469 MGI:5696765 NCBI chrNW_004936596:4,385,788...4,403,393 JBrowse link
G Spaca9 sperm acrosome associated 9 ISO (MGI:5883143|PMID:27914912) MGI PMID:27914912 MGI:5883143 NCBI chrNW_004936487:19,322,207...19,331,434 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (PMID:26487268) UniProtKB PMID:26487268 NCBI chrNW_004936525:115,614...174,641 JBrowse link
G Tulp3 TUB like protein 3 ISO (PMID:20889716) MGI PMID:20889716 NCBI chrNW_004936606:3,209,170...3,278,809 JBrowse link
ciliary inversin compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 ISO (MGI:6159309|PMID:29395339) MGI PMID:29395339 MGI:6159309 NCBI chrNW_004936524:7,320,069...7,379,417 JBrowse link
G Invs inversin ISO (MGI:5578232|PMID:20169535), (MGI:6159309|PMID:29395339) MGI PMID:20169535 PMID:29395339 MGI:5578232 MGI:6159309 NCBI chrNW_004936524:8,470,958...8,612,835 JBrowse link
G Nek8 NIMA related kinase 8 ISO (MGI:5578232|PMID:20169535), (MGI:6159309|PMID:29395339) MGI PMID:20169535 PMID:29395339 MGI:5578232 MGI:6159309 NCBI chrNW_004936538:4,938,739...4,952,083 JBrowse link
G Nphp3 nephrocystin 3 ISO (MGI:5578232|PMID:20169535), (MGI:6159309|PMID:29395339) MGI PMID:20169535 PMID:29395339 MGI:5578232 MGI:6159309 NCBI chrNW_004936529:6,013,321...6,048,249 JBrowse link
ciliary membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP ribosylation factor like GTPase 13B ISO (MGI:5528615|PMID:23817546), (MGI:5553238|PMID:21976698), (MGI:5805574|PMID:27727273) UniProt PMID:21976698 PMID:23817546 PMID:27727273 MGI:5528615 MGI:5553238 MGI:5805574 NCBI chrNW_004936666:115,964...179,639 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (PMID:17574030) BHF-UCL PMID:17574030 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chrNW_004936502:7,933,312...8,281,492 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936706:37,480...53,306 JBrowse link
G Cltb clathrin light chain B ISO (MGI:4830632|PMID:20427320) MGI PMID:20427320 MGI:4830632 NCBI chrNW_004936597:665,365...689,867 JBrowse link
G Drd1 dopamine receptor D1 ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004936609:790,647...795,187 JBrowse link
G Drd2 dopamine receptor D2 ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Drd5 dopamine receptor D5 ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004936477:16,860,222...16,863,505 JBrowse link
G Efcab7 EF-hand calcium binding domain 7 ISO (MGI:5908325|PMID:24582806) UniProt PMID:24582806 MGI:5908325 NCBI chrNW_004936692:1,091,872...1,137,426 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO (MGI:4830632|PMID:20427320) MGI PMID:20427320 MGI:4830632 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Evc EvC ciliary complex subunit 1 ISO (MGI:5908325|PMID:24582806) UniProt PMID:24582806 MGI:5908325 NCBI chrNW_004936477:17,940,792...17,992,996 JBrowse link
G Evc2 EvC ciliary complex subunit 2 ISO (MGI:5908325|PMID:24582806) UniProt PMID:24582806 MGI:5908325 NCBI chrNW_004936477:17,835,479...17,938,014 JBrowse link
G Gpi glucose-6-phosphate isomerase ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936570:1,582,120...1,608,537 JBrowse link
G Gpr157 G protein-coupled receptor 157 ISO (MGI:5825412|PMID:27142930) UniProt PMID:27142930 MGI:5825412 NCBI chrNW_004936623:3,264,409...3,281,857 JBrowse link
G Iqce IQ motif containing E ISO (MGI:5908325|PMID:24582806) UniProt PMID:24582806 MGI:5908325 NCBI chrNW_004936823:340,959...389,593 JBrowse link
G LOC101967789 SH3 and multiple ankyrin repeat domains protein 2 ISO PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chrNW_004936599:196,512...463,749 JBrowse link
G LOC101968601 signal transducer CD24 ISO (MGI:2178911|PMID:11978835) MGI PMID:11978835 MGI:2178911 NCBI chrNW_004936491:16,706,745...16,707,010 JBrowse link
G Mchr1 melanin concentrating hormone receptor 1 ISO (MGI:5306530|PMID:22139371) MGI PMID:22139371 MGI:5306530 NCBI chrNW_004936492:1,153,895...1,156,980 JBrowse link
G Mosmo modulator of smoothened ISO (MGI:6111022|PMID:29290584) UniProt PMID:29290584 MGI:6111022 NCBI chrNW_004936501:6,981,331...7,047,046 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:5883145|PMID:27760766) UniProt PMID:27760766 MGI:5883145 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha ISO (PMID:22207244) UniProtKB PMID:22207244 NCBI chrNW_004936709:1,377,852...1,403,398 JBrowse link
G Septin2 septin 2 ISO (MGI:4462072|PMID:20558667) UniProt PMID:20558667 MGI:4462072 NCBI chrNW_004936745:518,650...555,187 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISO PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chrNW_004936629:114,175...168,697 JBrowse link
G Smo smoothened, frizzled class receptor ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Sstr3 somatostatin receptor 3 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936492:3,745,455...3,752,330 JBrowse link
G Tmem17 transmembrane protein 17 ISO (MGI:5300833|PMID:22179047) UniProt PMID:22179047 MGI:5300833 NCBI chrNW_004936491:7,721,150...7,726,983 JBrowse link
G Tmem231 transmembrane protein 231 ISO (MGI:5300833|PMID:22179047) UniProt PMID:22179047 MGI:5300833 NCBI chrNW_004936475:24,215,817...24,232,689 JBrowse link
G Tmem67 transmembrane protein 67 ISO (PMID:17185389) UniProtKB PMID:17185389 NCBI chrNW_004936544:6,887,867...6,931,669 JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats ISO (MGI:5430693|PMID:22678063) MGI PMID:22678063 MGI:5430693 NCBI chrNW_004936778:1,576,580...1,660,344 JBrowse link
ciliary plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nek4 NIMA related kinase 4 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936473:3,499,858...3,527,918 JBrowse link
ciliary pocket membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd1 EH domain containing 1 ISO (PMID:25686250) UniProtKB PMID:25686250 NCBI chrNW_004936599:4,451,207...4,473,078 JBrowse link
G Ehd3 EH domain containing 3 ISO (PMID:25686250) UniProtKB PMID:25686250 NCBI chrNW_004936493:1,864,836...1,896,079 JBrowse link
G Snap29 synaptosome associated protein 29 ISO (PMID:25686250) UniProtKB PMID:25686250 NCBI chrNW_004936619:2,377,284...2,402,049 JBrowse link
ciliary rootlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin ISO (MGI:3580205|PMID:15870283), (MGI:5467890|PMID:23178122)
(MGI:3608016|PMID:16018997), (MGI:4950337|PMID:21212183), (MGI:5467890|PMID:23178122), (MGI:6209354|PMID:29891944)
MGI PMID:15870283 PMID:16018997 PMID:21212183 PMID:23178122 PMID:29891944 MGI:3580205 MGI:3608016 MGI:4950337 MGI:5467890 MGI:6209354 NCBI chrNW_004936474:3,918,237...3,958,635 JBrowse link
G Kif5a kinesin family member 5A ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936646:1,697,531...1,730,376 JBrowse link
G Kif5b kinesin family member 5B ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936574:780,074...823,858 JBrowse link
G Kif5c kinesin family member 5C ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936469:28,282,921...28,431,638 JBrowse link
G Klc1 kinesin light chain 1 ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936621:1,471,574...1,505,119 JBrowse link
G Klc2 kinesin light chain 2 ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936599:3,325,013...3,334,366 JBrowse link
G Klc3 kinesin light chain 3 ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936706:1,811,727...1,816,485 JBrowse link
G Nek4 NIMA related kinase 4 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936473:3,499,858...3,527,918 JBrowse link
G Pjvk pejvakin ISO (MGI:5887150|PMID:28209736) MGI PMID:28209736 MGI:5887150 NCBI chrNW_004936509:7,670,557...7,677,480 JBrowse link
G Psen1 presenilin 1 ISO (MGI:3608016|PMID:16018997) MGI PMID:16018997 MGI:3608016 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Rab28 RAB28, member RAS oncogene family ISO PMID:23746546 UniProt PMID:23746546 RGD:8554122 NCBI chrNW_004936477:14,066,063...14,140,310 JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936880:440,900...511,503 JBrowse link
G Rpgrip1l RPGRIP1 like ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
ciliary tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc9 armadillo repeat containing 9 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936525:5,518,691...5,648,109 JBrowse link
G Cdkl5 cyclin dependent kinase like 5 ISO (PMID:29420175) UniProtKB PMID:29420175 NCBI chrNW_004936844:101,815...271,254 JBrowse link
G Cilk1 ciliogenesis associated kinase 1 ISO (PMID:24797473)
(MGI:5575827|PMID:24797473)
UniProtKB
UniProt
PMID:24797473 MGI:5575827 NCBI chrNW_004936476:7,830,714...7,869,533 JBrowse link
G Cluap1 clusterin associated protein 1 ISO (MGI:5509110|PMID:23742838) MGI PMID:23742838 MGI:5509110 NCBI chrNW_004936694:779,399...810,534 JBrowse link
G Cyld CYLD lysine 63 deubiquitinase ISO (MGI:5607344|PMID:25134987) UniProt PMID:25134987 MGI:5607344 NCBI chrNW_004936475:3,750,917...3,812,118 JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:5285455|PMID:21653639) MGI PMID:21653639 MGI:5285455 NCBI chrNW_004936469:49,616,552...49,788,760 JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:3689465|PMID:16775004) MGI PMID:16775004 MGI:3689465 NCBI chrNW_004936530:2,965,587...3,003,758 JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:3689465|PMID:16775004), (MGI:4361064|PMID:19654211), (MGI:5285455|PMID:21653639), (MGI:5554981|PMID:23955340) MGI PMID:16775004 PMID:19654211 PMID:21653639 PMID:23955340 MGI:3689465 MGI:4361064 MGI:5285455 MGI:5554981 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Mak male germ cell associated kinase ISO (MGI:5298333|PMID:21148103) MGI PMID:21148103 MGI:5298333 NCBI chrNW_004936534:2,170,853...2,239,647 JBrowse link
G Rp1 RP1 axonemal microtubule associated ISO (MGI:5298333|PMID:21148103) MGI PMID:21148103 MGI:5298333 NCBI chrNW_004936496:1,396,838...1,411,082 JBrowse link
G Spef1 sperm flagellar 1 ISO (MGI:6331463|PMID:30535028) UniProt PMID:30535028 MGI:6331463 NCBI chrNW_004936485:14,917,352...14,923,669 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (PMID:26487268) UniProtKB PMID:26487268 NCBI chrNW_004936525:115,614...174,641 JBrowse link
ciliary transition fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F ISO (PMID:25564561)
(MGI:5694347|PMID:25564561)
GO_Central
MGI
PMID:25564561 MGI:5694347 NCBI chrNW_004936628:3,642,281...3,695,262 JBrowse link
G Cep164 centrosomal protein 164 ISO (PMID:23348840)
(MGI:5554981|PMID:23955340), (MGI:6209354|PMID:29891944)
MGI PMID:23348840 PMID:23955340 PMID:29891944 MGI:5554981 MGI:6209354 NCBI chrNW_004936542:2,544,677...2,609,753 JBrowse link
G Cep83 centrosomal protein 83 ISO (PMID:23348840) MGI PMID:23348840 NCBI chrNW_004936507:10,671,371...10,792,863 JBrowse link
G Cep89 centrosomal protein 89 ISO (PMID:23348840), (PMID:23789104)
(MGI:5502817|PMID:23789104)
MGI PMID:23348840 PMID:23789104 MGI:5502817 NCBI chrNW_004936570:2,837,002...2,909,128 JBrowse link
G Dzip1 DAZ interacting zinc finger protein 1 ISO (MGI:5554981|PMID:23955340) MGI PMID:23955340 MGI:5554981 NCBI chrNW_004936472:14,141,502...14,205,543 JBrowse link
G Fbf1 Fas binding factor 1 ISO (PMID:23348840) MGI PMID:23348840 NCBI chrNW_004936594:1,087,580...1,112,229 JBrowse link
G Nin ninein ISO (MGI:5554981|PMID:23955340), (MGI:5694347|PMID:25564561), (MGI:5696763|PMID:10934040), (MGI:5696765|PMID:24947469) MGI PMID:10934040 PMID:23955340 PMID:24947469 PMID:25564561 MGI:5554981 MGI:5694347 MGI:5696763 MGI:5696765 NCBI chrNW_004936495:14,791,246...14,897,454 JBrowse link
G Odf2 outer dense fiber of sperm tails 2 ISO (MGI:5696765|PMID:24947469) MGI PMID:24947469 MGI:5696765 NCBI chrNW_004936487:15,987,893...16,029,539 JBrowse link
G Sclt1 sodium channel and clathrin linker 1 ISO (PMID:23348840) MGI PMID:23348840 NCBI chrNW_004936642:1,984,936...2,146,707 JBrowse link
G Tchp trichoplein keratin filament binding ISO (MGI:5696765|PMID:24947469) MGI PMID:24947469 MGI:5696765 NCBI chrNW_004936769:1,505,150...1,519,883 JBrowse link
ciliary transition zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl3 ADP ribosylation factor like GTPase 3 ISO (MGI:5925653|PMID:26455799) UniProt PMID:26455799 MGI:5925653 NCBI chrNW_004936600:3,190,212...3,229,831 JBrowse link
G B9d1 B9 domain containing 1 ISO (MGI:5300833|PMID:22179047) UniProt PMID:22179047 MGI:5300833 NCBI chrNW_004936881:396,930...411,059 JBrowse link
G B9d2 B9 domain containing 2 ISO (PMID:15916950), (PMID:19208769), (PMID:21422230), (PMID:21763481) SYSCILIA_CCNET PMID:15916950 PMID:19208769 PMID:21422230 PMID:21763481 NCBI chrNW_004936661:3,759,031...3,765,361 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (PMID:23943788) GO_Central PMID:23943788 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 ISO (PMID:23943788) GO_Central PMID:23943788 NCBI chrNW_004936478:8,959,198...9,408,683 JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A ISO (MGI:5300833|PMID:22179047), (MGI:5696765|PMID:24947469) UniProt PMID:22179047 PMID:24947469 MGI:5300833 MGI:5696765 NCBI chrNW_004936477:12,315,829...12,415,915 JBrowse link
G Ccdc66 coiled-coil domain containing 66 NOT|colocalizes_with ISO (PMID:28235840) UniProtKB PMID:28235840 NCBI chrNW_004936473:7,027,543...7,054,079 JBrowse link
G Ccsap centriole, cilia and spindle associated protein ISO (PMID:22493317) UniProtKB PMID:22493317 NCBI chrNW_004936484:20,271,834...20,277,945 JBrowse link
G Cep131 centrosomal protein 131 ISO (PMID:24415959)
(MGI:5647985|PMID:24415959)
GO_Central
MGI
PMID:24415959 MGI:5647985 NCBI chrNW_004936594:4,914,174...4,938,364 JBrowse link
G Cep290 centrosomal protein 290 ISO (PMID:23943788)
(MGI:5424301|PMID:22446187)
GO_Central
MGI
PMID:22446187 PMID:23943788 MGI:5424301 NCBI chrNW_004936507:5,223,756...5,305,392 JBrowse link
G Cetn3 centrin 3 ISO (MGI:5303017|PMID:22031837) MGI PMID:22031837 MGI:5303017 NCBI chrNW_004936469:8,501,572...8,516,722 JBrowse link
G Cfap36 cilia and flagella associated protein 36 ISO (PMID:26455799) UniProtKB PMID:26455799 NCBI chrNW_004936491:1,884,071...1,915,127 JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 ISO (MGI:6152361|PMID:29459677) UniProt PMID:29459677 MGI:6152361 NCBI chrNW_004936544:6,848,026...6,868,522 JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 ISO (MGI:5648689|PMID:25877302) MGI PMID:25877302 MGI:5648689 NCBI chrNW_004936518:4,706,496...4,847,283 JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ISO (PMID:26130459) UniProtKB PMID:26130459 NCBI chrNW_004936508:8,119,733...8,149,022 JBrowse link
G Macir macrophage immunometabolism regulator ISO (PMID:22085962) UniProtKB PMID:22085962 NCBI chrNW_004936523:1,273,812...1,292,837 JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO (MGI:5288576|PMID:21725307)
(MGI:5544506|PMID:24302887)
UniProt
MGI
PMID:21725307 PMID:24302887 MGI:5288576 MGI:5544506 NCBI chrNW_004936490:4,865,243...4,876,601 JBrowse link
G Nek4 NIMA related kinase 4 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936473:3,499,858...3,527,918 JBrowse link
G Nphp4 nephrocystin 4 ISO (MGI:5578232|PMID:20169535) MGI PMID:20169535 MGI:5578232 NCBI chrNW_004936623:802,152...904,198 JBrowse link
G Pcm1 pericentriolar material 1 ISO (PMID:24415959) GO_Central PMID:24415959 NCBI chrNW_004936554:7,906...86,187 JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004936880:440,900...511,503 JBrowse link
G Rpgrip1l RPGRIP1 like ISO (MGI:5449641|PMID:22927466), (MGI:6149643|PMID:29487109)
(PMID:26595381)
RGD
MGI
WormBase
PMID:21685204 PMID:22927466 PMID:26595381 PMID:29487109 MGI:5449641 MGI:6149643 RGD:13204813 NCBI chrNW_004936475:6,219,187...6,321,612 JBrowse link
G Septin2 septin 2 ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chrNW_004936745:518,650...555,187 JBrowse link
G Tctn1 tectonic family member 1 ISO (MGI:5288576|PMID:21725307) UniProt PMID:21725307 MGI:5288576 NCBI chrNW_004936558:3,552,909...3,581,212 JBrowse link
G Tctn2 tectonic family member 2 ISO (MGI:6149643|PMID:29487109) MGI PMID:29487109 MGI:6149643 NCBI chrNW_004936558:1,142,608...1,168,755 JBrowse link
G Tmem107 transmembrane protein 107 ISO (PMID:26595381)
(MGI:6103051|PMID:26518474)
WormBase
UniProt
PMID:26518474 PMID:26595381 MGI:6103051 NCBI chrNW_004936595:1,404,017...1,406,756 JBrowse link
G Tmem17 transmembrane protein 17 ISO (MGI:5300833|PMID:22179047) UniProt PMID:22179047 MGI:5300833 NCBI chrNW_004936491:7,721,150...7,726,983 JBrowse link
G Tmem216 transmembrane protein 216 ISO (MGI:5288576|PMID:21725307) UniProt PMID:21725307 MGI:5288576 NCBI chrNW_004936581:1,654,021...1,658,526 JBrowse link
G Tmem231 transmembrane protein 231 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936475:24,215,817...24,232,689 JBrowse link
G Tmem237 transmembrane protein 237 ISO (PMID:22152675)
(MGI:5315664|PMID:22152675)
UniProtKB
UniProt
PMID:22152675 MGI:5315664 NCBI chrNW_004936726:872,368...892,185 JBrowse link
G Tmem67 transmembrane protein 67 ISO (PMID:26595381) WormBase PMID:26595381 NCBI chrNW_004936544:6,887,867...6,931,669 JBrowse link
G Tmem80 transmembrane protein 80 ISO (MGI:5770161|PMID:26982032) WB PMID:26982032 MGI:5770161 NCBI chrNW_004936888:501,065...504,465 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (PMID:26487268) UniProtKB PMID:26487268 NCBI chrNW_004936525:115,614...174,641 JBrowse link
G Ttbk2 tau tubulin kinase 2 ISO (PMID:23141541)
(MGI:5493390|PMID:23141541)
GO_Central
MGI
PMID:23141541 MGI:5493390 NCBI chrNW_004936471:6,003,294...6,108,677 JBrowse link
G Unc119b unc-119 lipid binding chaperone B ISO (PMID:22085962) UniProtKB PMID:22085962 NCBI chrNW_004936668:275,573...289,938 JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guca1a guanylate cyclase activator 1A ISO (PMID:9620085) UniProt PMID:9620085 NCBI chrNW_004936476:17,690,484...17,701,288 JBrowse link
G Guca1b guanylate cyclase activator 1B ISO (PMID:9620085) UniProt PMID:9620085 NCBI chrNW_004936476:17,679,505...17,688,970 JBrowse link
G Rd3 retinal degeneration 3, GUCY2D regulator ISO (MGI:4867355|PMID:21078983) UniProt PMID:21078983 MGI:4867355 NCBI chrNW_004936557:1,852,996...1,873,070 JBrowse link
G Tmem237 transmembrane protein 237 ISO (MGI:4830641|PMID:20375344) MGI PMID:20375344 MGI:4830641 NCBI chrNW_004936726:872,368...892,185 JBrowse link
distal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah9 dynein axonemal heavy chain 9 ISO (PMID:26909801), (PMID:30471717) GO_Central PMID:26909801 PMID:30471717 NCBI chrNW_004936595:4,338,831...4,671,178 JBrowse link
inner dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah1 dynein axonemal heavy chain 1 ISO (PMID:24360805) SYSCILIA_CCNET PMID:24360805 NCBI chrNW_004936473:3,170,060...3,238,608 JBrowse link
G Dnah7 dynein axonemal heavy chain 7 ISO (PMID:11877439) SYSCILIA_CCNET PMID:11877439 NCBI chrNW_004936506:3,001,304...3,298,241 JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A ISO (MGI:6118860|PMID:29293958) UniProt PMID:29293958 MGI:6118860 NCBI chrNW_004936748:479,026...612,554 JBrowse link
G Ift20 intraflagellar transport 20 ISO (MGI:5615303|PMID:25605782) MGI PMID:25605782 MGI:5615303 NCBI chrNW_004936538:4,484,484...4,491,688 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:5424301|PMID:22446187) MGI PMID:22446187 MGI:5424301 NCBI chrNW_004936485:9,089,118...9,114,396 JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A ISO (MGI:6118860|PMID:29293958) UniProt PMID:29293958 MGI:6118860 NCBI chrNW_004936748:479,026...612,554 JBrowse link
G Cdh23 cadherin related 23 ISO (MGI:3577782|PMID:15882574) MGI PMID:15882574 MGI:3577782 NCBI chrNW_004936521:7,078,874...7,285,361 JBrowse link
G Dcdc2 doublecortin domain containing 2 ISO PMID:25601850 UniProt PMID:25601850 RGD:10412291 NCBI chrNW_004936671:605,114...736,217 JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO (MGI:4421424|PMID:20137774) UniProt PMID:20137774 MGI:4421424 NCBI chrNW_004936482:9,981,410...10,087,222 JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:3773480|PMID:18066062) MGI PMID:18066062 MGI:3773480 NCBI chrNW_004936720:1,041,216...1,168,725 JBrowse link
G Kncn kinocilin ISO (MGI:3576794|PMID:15855039), (MGI:4881391|PMID:20510926) MGI PMID:15855039 PMID:20510926 MGI:3576794 MGI:4881391 NCBI chrNW_004936474:27,559,270...27,562,193 JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:5477842|PMID:23533177) MGI PMID:23533177 MGI:5477842 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Strc stereocilin ISO (MGI:5430850|PMID:21165971) UniProt PMID:21165971 MGI:5430850 NCBI chrNW_004936471:6,760,289...6,777,425 JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO (MGI:5477842|PMID:23533177) MGI PMID:23533177 MGI:5477842 NCBI chrNW_004936500:10,451,599...10,812,239 JBrowse link
MKS complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936560:2,881,631...3,057,256 JBrowse link
G B9d1 B9 domain containing 1 ISO (MGI:5288576|PMID:21725307), (MGI:5300833|PMID:22179047) MGI PMID:21725307 PMID:22179047 MGI:5288576 MGI:5300833 NCBI chrNW_004936881:396,930...411,059 JBrowse link
G B9d2 B9 domain containing 2 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936661:3,759,031...3,765,361 JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A ISO (MGI:5288576|PMID:21725307), (MGI:5300833|PMID:22179047) MGI PMID:21725307 PMID:22179047 MGI:5288576 MGI:5300833 NCBI chrNW_004936477:12,315,829...12,415,915 JBrowse link
G Cep290 centrosomal protein 290 ISO (MGI:5288576|PMID:21725307) UniProt PMID:21725307 MGI:5288576 NCBI chrNW_004936507:5,223,756...5,305,392 JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936769:1,171,725...1,197,497 JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO (MGI:5288576|PMID:21725307), (MGI:5300833|PMID:22179047) MGI PMID:21725307 PMID:22179047 MGI:5288576 MGI:5300833 NCBI chrNW_004936490:4,865,243...4,876,601 JBrowse link
G Tctn1 tectonic family member 1 ISO (MGI:5288576|PMID:21725307), (MGI:5300833|PMID:22179047) MGI PMID:21725307 PMID:22179047 MGI:5288576 MGI:5300833 NCBI chrNW_004936558:3,552,909...3,581,212 JBrowse link
G Tctn2 tectonic family member 2 ISO (MGI:5288576|PMID:21725307), (MGI:5300833|PMID:22179047) MGI PMID:21725307 PMID:22179047 MGI:5288576 MGI:5300833 NCBI chrNW_004936558:1,142,608...1,168,755 JBrowse link
G Tmem107 transmembrane protein 107 ISO (PMID:26595381) UniProtKB PMID:26595381 NCBI chrNW_004936595:1,404,017...1,406,756 JBrowse link
G Tmem17 transmembrane protein 17 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936491:7,721,150...7,726,983 JBrowse link
G Tmem216 transmembrane protein 216 ISO (MGI:5288576|PMID:21725307) UniProt PMID:21725307 MGI:5288576 NCBI chrNW_004936581:1,654,021...1,658,526 JBrowse link
G Tmem231 transmembrane protein 231 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004936475:24,215,817...24,232,689 JBrowse link
G Tmem67 transmembrane protein 67 ISO (MGI:5288576|PMID:21725307) UniProt PMID:21725307 MGI:5288576 NCBI chrNW_004936544:6,887,867...6,931,669 JBrowse link
motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl7a actin like 7A ISO (MGI:2668289|PMID:12672658) MGI PMID:12672658 MGI:2668289 NCBI chrNW_004936559:3,983,288...3,986,932 JBrowse link
G Adcy10 adenylate cyclase 10 colocalizes_with ISO (PMID:17591988) UniProtKB PMID:17591988 NCBI chrNW_004936481:18,274,158...18,330,136 JBrowse link
G Akap3 A-kinase anchoring protein 3 ISO (MGI:2662354|PMID:12606363) MGI PMID:12606363 MGI:2662354 NCBI chrNW_004936606:4,771,158...4,794,666 JBrowse link
G Akap4 A-kinase anchoring protein 4 ISO (PMID:9822690)
(MGI:1328474|PMID:9852104)
UniProtKB
UniProt
PMID:9822690 PMID:9852104 MGI:1328474 NCBI chrNW_004936721:1,692,623...1,700,256 JBrowse link
G Anxa1 annexin A1 ISO (MGI:3760064|PMID:17384087) UniProt PMID:17384087 MGI:3760064 NCBI chrNW_004936503:9,124,314...9,142,372 JBrowse link
G Arl13b ADP ribosylation factor like GTPase 13B ISO (MGI:5559921|PMID:24336288) MGI PMID:24336288 MGI:5559921 NCBI chrNW_004936666:115,964...179,639 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO (MGI:3776933|PMID:18299575) BHF-UCL PMID:18299575 MGI:3776933 NCBI chrNW_004936599:3,059,274...3,076,853 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO (PMID:18299575)
(MGI:3776933|PMID:18299575)
BHF-UCL PMID:18299575 MGI:3776933 NCBI chrNW_004936475:8,785,914...8,810,490 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO (PMID:18299575)
(MGI:3776933|PMID:18299575)
BHF-UCL PMID:18299575 MGI:3776933 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Cabs1 calcium binding protein, spermatid associated 1 ISO (MGI:3849251|PMID:19208547) UniProt PMID:19208547 MGI:3849251 NCBI chrNW_004936598:4,333,108...4,334,567 JBrowse link
G Cabyr calcium binding tyrosine phosphorylation regulated ISO (PMID:18421703)
(MGI:2664482|PMID:12801634)
BHF-UCL
MGI
PMID:12801634 PMID:18421703 MGI:2664482 NCBI chrNW_004936550:3,519,470...3,545,938 JBrowse link
G Camsap3 calmodulin regulated spectrin associated protein family member 3 ISO (MGI:6436727|PMID:32482850) UniProt PMID:32482850 MGI:6436727 NCBI chrNW_004936588:4,660,664...4,669,836 JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO (MGI:5763712|PMID:26387594) MGI PMID:26387594 MGI:5763712 NCBI chrNW_004936594:4,075,105...4,124,850 JBrowse link
G Cep20 centrosomal protein 20 ISO (MGI:5009352|PMID:20551181) UniProt PMID:20551181 MGI:5009352 NCBI chrNW_004936501:3,320,671...3,333,705 JBrowse link
G Cep295nl CEP295 N-terminal like ISO (MGI:4365674|PMID:19706271) MGI PMID:19706271 MGI:4365674 NCBI chrNW_004936594:3,255,022...3,256,650 JBrowse link
G Cep89 centrosomal protein 89 ISO (MGI:5502817|PMID:23789104) MGI PMID:23789104 MGI:5502817 NCBI chrNW_004936570:2,837,002...2,909,128 JBrowse link
G Cfap70 cilia and flagella associated protein 70 ISO (MGI:6383288|PMID:30158508) UniProt PMID:30158508 MGI:6383288 NCBI chrNW_004936521:5,680,846...5,785,818 JBrowse link
G Daam1 dishevelled associated activator of morphogenesis 1 ISO (PMID:26644512) UniProtKB PMID:26644512 NCBI chrNW_004936495:3,591,611...3,757,646 JBrowse link
G Dnaaf5 dynein axonemal assembly factor 5 NOT ISO (PMID:23040496), (PMID:25232951)
(MGI:5607449|PMID:25232951)
UniProtKB
UniProt
PMID:23040496 PMID:25232951 MGI:5607449 NCBI chrNW_004936754:978,726...1,034,748 JBrowse link
G Dnah11 dynein axonemal heavy chain 11 ISO (PMID:31178125)
(MGI:1347236|PMID:10556073)
UniProt
MGI
PMID:10556073 PMID:31178125 MGI:1347236 NCBI chrNW_004936546:7,370,180...7,681,835 JBrowse link
G Dnah2 dynein axonemal heavy chain 2 ISO (PMID:31178125)
(MGI:1337724|PMID:10330409)
UniProt
MGI
PMID:10330409 PMID:31178125 MGI:1337724 NCBI chrNW_004936595:970,004...1,076,582 JBrowse link
G Dnah5 dynein axonemal heavy chain 5 ISO (PMID:31178125)