ONTOLOGY REPORT - ANNOTATIONS
Term: clathrin-coated pit
Accession: GO:0005905
browse the term
Definition: A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes.
Synonyms: exact_synonym: coated pit
xref: NIF_Subcellular:sao1969557946
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Ackr3
atypical chemokine receptor 3
located_in
ISO
(PMID:22457824)
UniProt
PMID:22457824
NCBI chrNW_004955453:195,346...218,034
Ensembl chrNW_004955453:195,346...218,034
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Adcy8
adenylate cyclase 8
located_in
ISO
PMID:19158400
UniProt
PMID:19158400
RGD:13800545
NCBI chrNW_004955461:5,497,708...5,725,574
Ensembl chrNW_004955461:5,497,628...5,725,574
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Ap2m1
adaptor related protein complex 2 subunit mu 1
located_in
ISO
(PMID:31104773)
UniProt
PMID:31104773
NCBI chrNW_004955420:23,281,720...23,290,430
Ensembl chrNW_004955420:23,281,720...23,290,430
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Bcl2l1
BCL2 like 1
located_in
ISO
PMID:23792689
CAFA
PMID:23792689
RGD:12793033
NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
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Bmpr2
bone morphogenetic protein receptor type 2
is_active_in
ISO
(PMID:16923969)
MGI
PMID:16923969
NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
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Ccdc32
coiled-coil domain containing 32
part_of
ISO
(PMID:33859415)
UniProt
PMID:33859415
NCBI chrNW_004955416:7,464,498...7,482,153
Ensembl chrNW_004955416:7,462,770...7,479,242
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Cdhr5
cadherin related family member 5
ISO
RGD
PMID:10801787
RGD:633361
NCBI chrNW_004955476:11,435,677...11,442,338
Ensembl chrNW_004955476:11,435,642...11,442,873
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Clta
clathrin light chain A
ISO
RGD
PMID:14985443
RGD:2301373
NCBI chrNW_004955472:96,958...117,230
Ensembl chrNW_004955472:97,235...117,144
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Cltc
clathrin heavy chain
located_in
ISO
(PMID:26437238)
MGI
PMID:26437238
NCBI chrNW_004955451:3,380,304...3,445,973
Ensembl chrNW_004955451:3,380,304...3,445,973
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Cltcl1
clathrin heavy chain like 1
located_in
ISO
(PMID:19509056)
UniProt
PMID:19509056
NCBI chrNW_004955442:18,688,019...18,803,458
Ensembl chrNW_004955442:18,687,746...18,804,104
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Cttn
cortactin
located_in
ISO
PMID:19995918
UniProt
PMID:19995918
RGD:10047197
NCBI chrNW_004955422:15,838,036...15,874,067
Ensembl chrNW_004955422:15,835,145...15,874,108
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Cubn
cubilin
located_in
ISO
PMID:14576052 (PMID:15616221)
UniProt MGI
PMID:14576052 PMID:15616221
RGD:8554807
NCBI chrNW_004955429:10,789,674...11,038,297
Ensembl chrNW_004955429:10,788,959...11,038,845
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Dab2
DAB adaptor protein 2
located_in
ISO
(PMID:12857860)
UniProt
PMID:12857860
NCBI chrNW_004955426:23,852,752...23,883,030
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Dgkd
diacylglycerol kinase delta
located_in
ISO
(PMID:17880279)
UniProt
PMID:17880279
NCBI chrNW_004955453:2,740,922...2,802,669
Ensembl chrNW_004955453:2,742,842...2,835,811
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Dnm1
dynamin 1
located_in
ISO
(PMID:8101525)
UniProt
PMID:8101525
NCBI chrNW_004955570:752,335...781,770
Ensembl chrNW_004955570:752,335...781,770
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Dnm1l
dynamin 1 like
located_in
ISO
PMID:23792689
CAFA
PMID:23792689
RGD:12793033
NCBI chrNW_004955505:3,025,742...3,081,491
Ensembl chrNW_004955505:3,023,018...3,081,680
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Dnm2
dynamin 2
located_in
ISO
(PMID:26437238) PMID:19995918
RGD MGI UniProt
PMID:9725914 PMID:19995918 PMID:26437238
RGD:10047197 RGD:9685132
NCBI chrNW_004955495:1,860,644...1,934,589
Ensembl chrNW_004955495:1,860,644...1,934,818
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Epn3
epsin 3
located_in
ISO
(PMID:21115825)
MGI
PMID:21115825
NCBI chrNW_004955451:11,209,454...11,218,427
Ensembl chrNW_004955451:11,209,634...11,215,073
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Eps15
epidermal growth factor receptor pathway substrate 15
located_in
ISO
(PMID:20427320)
MGI
PMID:20427320
NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
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Fcho1
FCH and mu domain containing endocytic adaptor 1
located_in is_active_in
ISO
(PMID:22484487) (PMID:20448150)
MGI ParkinsonsUK-UCL
PMID:20448150 PMID:22484487
NCBI chrNW_004955524:3,451,204...3,470,163
Ensembl chrNW_004955524:3,450,529...3,465,848
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Fcho2
FCH and mu domain containing endocytic adaptor 2
located_in is_active_in
ISO
(PMID:21762413), (PMID:22484487) (PMID:20448150)
MGI ParkinsonsUK-UCL UniProt
PMID:20448150 PMID:21762413 PMID:22484487
NCBI chrNW_004955425:27,506,645...27,632,983
Ensembl chrNW_004955425:27,506,660...27,632,983
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Fchsd2
FCH and double SH3 domains 2
located_in
ISO
(PMID:29887380)
UniProt
PMID:29887380
NCBI chrNW_004955414:18,343,832...18,597,675
Ensembl chrNW_004955414:18,343,832...18,597,675
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Hip1r
huntingtin interacting protein 1 related
located_in
ISO
(PMID:10613908), (PMID:11564758)
MGI
PMID:10613908 PMID:11564758
NCBI chrNW_004955482:5,885,807...5,896,386
Ensembl chrNW_004955482:5,884,839...5,896,389
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Hspd1
heat shock protein family D (Hsp60) member 1
located_in
ISO
(PMID:11807771)
BHF-UCL
PMID:11807771
NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419
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Inpp5f
inositol polyphosphate-5-phosphatase F
located_in
ISO
(PMID:25869669)
ParkinsonsUK-UCL
PMID:25869669
NCBI chrNW_004955551:634,724...641,266
Ensembl chrNW_004955551:570,304...640,243
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Itsn1
intersectin 1
located_in
ISO
(PMID:26437238) (PMID:20946875), (PMID:29887380)
RGD MGI UniProt
PMID:19258322 PMID:20946875 PMID:26437238 PMID:29887380
RGD:13461864
NCBI chrNW_004955407:33,056,004...33,275,681
Ensembl chrNW_004955407:33,113,319...33,275,675
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Ldlr
low density lipoprotein receptor
located_in
ISO
(PMID:15166224), (PMID:6091915)
BHF-UCL
PMID:6091915 PMID:15166224
NCBI chrNW_004955495:2,114,702...2,135,584
Ensembl chrNW_004955495:2,114,434...2,138,056
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LOC102027549
serotransferrin
located_in
ISO
(PMID:12857860) (PMID:20427320)
UniProt MGI
PMID:12857860 PMID:20427320
NCBI chrNW_004955501:4,801,710...4,832,025
Ensembl chrNW_004955501:4,801,885...4,831,910
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Lrp2
LDL receptor related protein 2
located_in
ISO
(PMID:15616221)
MGI
PMID:15616221
NCBI chrNW_004955449:5,155,109...5,314,886
Ensembl chrNW_004955449:5,160,946...5,314,948
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Myo6
myosin VI
NOT|located_in
ISO
(PMID:12857860)
UniProt
PMID:12857860
NCBI chrNW_004955502:4,219,067...4,356,988
Ensembl chrNW_004955502:4,218,885...4,356,988
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Necap1
NECAP endocytosis associated 1
located_in
ISO
(PMID:14555962)
UniProt
PMID:14555962
NCBI chrNW_004955413:6,737,785...6,751,672
Ensembl chrNW_004955413:6,737,785...6,754,162
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Numb
NUMB endocytic adaptor protein
located_in
ISO
(PMID:26437238)
MGI
PMID:26437238
NCBI chrNW_004955523:2,025,652...2,076,037
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Picalm
phosphatidylinositol binding clathrin assembly protein
located_in
ISO
(PMID:25898166) (PMID:12832620) (PMID:10436022)
ARUK-UCL UniProt
PMID:10436022 PMID:12832620 PMID:25898166
NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208
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Rab35
RAB35, member RAS oncogene family
located_in
ISO
(PMID:16950109)
UniProt
PMID:16950109
NCBI chrNW_004955455:11,484,557...11,502,630
Ensembl chrNW_004955455:11,484,557...11,502,630
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Reps1
RALBP1 associated Eps domain containing 1
located_in
ISO
(PMID:20946875)
UniProt
PMID:20946875
NCBI chrNW_004955436:20,677,676...20,752,842
Ensembl chrNW_004955436:20,713,655...20,752,842
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Sele
selectin E
located_in
ISO
(PMID:18029551)
BHF-UCL
PMID:18029551
NCBI chrNW_004955462:7,564,437...7,575,297
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Sgip1
SH3GL interacting endocytic adaptor 1
located_in
ISO
(PMID:20946875)
UniProt
PMID:20946875
NCBI chrNW_004955423:24,155,401...24,353,166
Ensembl chrNW_004955423:24,157,368...24,353,206
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Slc2a4
solute carrier family 2 member 4
ISO
RGD
PMID:1881917
RGD:2306204
NCBI chrNW_004955467:9,630,304...9,636,005
Ensembl chrNW_004955467:9,630,304...9,636,005
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Snx9
sorting nexin 9
located_in
ISO
(PMID:15703209)
UniProt
PMID:15703209
NCBI chrNW_004955439:4,422,385...4,503,408
Ensembl chrNW_004955439:4,421,297...4,503,393
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Sort1
sortilin 1
located_in
ISO
(PMID:11331584)
BHF-UCL
PMID:11331584
NCBI chrNW_004955435:12,725,952...12,819,280
Ensembl chrNW_004955435:12,730,270...12,819,029
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Sphk1
sphingosine kinase 1
located_in
ISO
(PMID:24929359)
UniProt
PMID:24929359
NCBI chrNW_004955506:5,902,079...5,906,639
Ensembl chrNW_004955506:5,902,345...5,904,988
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Ston1
stonin 1
located_in
ISO
(PMID:26437238)
MGI
PMID:26437238
NCBI chrNW_004955441:15,071,765...15,126,534
Ensembl chrNW_004955441:15,112,555...15,127,354
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Tfap2a
transcription factor AP-2 alpha
located_in
ISO
(PMID:26437238)
MGI
PMID:26437238
NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
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Tfrc
transferrin receptor
located_in
ISO
(PMID:12857860) (PMID:18434600)
UniProt MGI
PMID:12857860 PMID:18434600
NCBI chrNW_004955420:12,348,392...12,372,714
Ensembl chrNW_004955420:12,348,821...12,372,691
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Tnk2
tyrosine kinase non receptor 2
located_in
ISO
(PMID:21169560)
UniProt
PMID:21169560
NCBI chrNW_004955420:12,302,463...12,337,976
Ensembl chrNW_004955420:12,300,572...12,338,058
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Ap2a1
adaptor related protein complex 2 subunit alpha 1
part_of
ISO
(PMID:23676497)
UniProt
PMID:23676497
NCBI chrNW_004955559:1,117,380...1,143,403
Ensembl chrNW_004955559:1,117,636...1,143,409
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Ap2a2
adaptor related protein complex 2 subunit alpha 2
part_of
ISO
(PMID:23676497) PMID:12086608
UniProt CAFA
PMID:12086608 PMID:23676497
RGD:12793054
NCBI chrNW_004955476:11,184,944...11,229,385
Ensembl chrNW_004955476:11,185,223...11,229,409
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Ap2b1
adaptor related protein complex 2 subunit beta 1
part_of
ISO
(PMID:23676497) (PMID:12086608)
UniProt CAFA
PMID:12086608 PMID:23676497
NCBI chrNW_004955481:10,061,021...10,175,070
Ensembl chrNW_004955481:10,064,220...10,175,627
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Ap2m1
adaptor related protein complex 2 subunit mu 1
part_of
ISO
(PMID:23676497) PMID:12086608
UniProt CAFA
PMID:12086608 PMID:23676497
RGD:12793054
NCBI chrNW_004955420:23,281,720...23,290,430
Ensembl chrNW_004955420:23,281,720...23,290,430
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Ap2s1
adaptor related protein complex 2 subunit sigma 1
part_of
ISO
PMID:2040623 (PMID:12086608)
MGI CAFA RGD
PMID:2040623 PMID:7593184 PMID:12086608
RGD:2306270 RGD:727584
NCBI chrNW_004955574:835,272...845,710
Ensembl chrNW_004955574:830,910...846,161
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Eps15
epidermal growth factor receptor pathway substrate 15
part_of
ISO
(PMID:17626015)
UniProt
PMID:17626015
NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
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Sgip1
SH3GL interacting endocytic adaptor 1
part_of
ISO
(PMID:17626015)
UniProt
PMID:17626015
NCBI chrNW_004955423:24,155,401...24,353,166
Ensembl chrNW_004955423:24,157,368...24,353,206
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Slc18a3
solute carrier family 18 member A3
ISO
RGD
PMID:14724281
RGD:2317430
NCBI chrNW_004955556:696,779...698,869
Ensembl chrNW_004955556:696,974...698,566
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Tbc1d5
TBC1 domain family member 5
located_in
ISO
(PMID:24603492)
UniProt
PMID:24603492
NCBI chrNW_004955430:9,411,865...9,966,710
Ensembl chrNW_004955430:9,410,475...9,940,460
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Dab2
DAB adaptor protein 2
part_of
ISO
(PMID:11247302)
UniProt
PMID:11247302
NCBI chrNW_004955426:23,852,752...23,883,030
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Eps15
epidermal growth factor receptor pathway substrate 15
part_of
ISO
(PMID:18434600)
MGI
PMID:18434600
NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
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Eps15l1
epidermal growth factor receptor pathway substrate 15 like 1
part_of
ISO
(PMID:18434600)
MGI
PMID:18434600
NCBI chrNW_004955524:1,264,035...1,309,394
Ensembl chrNW_004955524:1,272,565...1,309,294
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Picalm
phosphatidylinositol binding clathrin assembly protein
part_of
ISO
(PMID:10436022), (PMID:16262731)
BHF-UCL
PMID:10436022 PMID:16262731
NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208
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Synj1
synaptojanin 1
part_of
ISO
PMID:9428629
ParkinsonsUK-UCL
PMID:9428629
RGD:11059574
NCBI chrNW_004955407:32,094,076...32,175,676
Ensembl chrNW_004955407:32,093,479...32,175,795
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