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ONTOLOGY REPORT - ANNOTATIONS

Term:actin filament
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Accession:GO:0005884 term browser browse the term
Definition:A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
Synonyms:exact_synonym: microfilament
 xref: FMA:63850;   NIF_Subcellular:sao1588493326;   Wikipedia:Actin

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actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 located_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chrNW_004624765:12,971,867...13,091,446
Ensembl chrNW_004624765:12,998,315...13,091,370 		JBrowse link
G Ackr2 atypical chemokine receptor 2 located_in ISO (PMID:23633677) UniProt PMID:23633677 NCBI chrNW_004624730:76,900,112...76,918,805
Ensembl chrNW_004624730:76,901,098...76,902,219 		JBrowse link
G Acta1 actin alpha 1, skeletal muscle located_in ISO (PMID:12849983) UniProt PMID:12849983 NCBI chrNW_004624775:19,650,923...19,653,707
Ensembl chrNW_004624775:19,650,822...19,654,730 		JBrowse link
G Actb actin beta located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512 		JBrowse link
G Actbl2 actin beta like 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:1,787,161...1,788,634 JBrowse link
G Actc1 actin alpha cardiac muscle 1 located_in ISO (PMID:16611632), (PMID:19799913) UniProt PMID:16611632 PMID:19799913 NCBI chrNW_004624804:2,006,439...2,011,809
Ensembl chrNW_004624804:2,005,997...2,011,023 		JBrowse link
G Actg1 actin gamma 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Actn1 actinin alpha 1 located_in ISO (PMID:23434115), (PMID:24069336) UniProt PMID:23434115 PMID:24069336 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729 		JBrowse link
G Actr3 actin related protein 3 located_in ISO RGD PMID:10209028 RGD:2306208 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811 		JBrowse link
G Afap1 actin filament associated protein 1 ISO RGD PMID:12114187 RGD:625602 NCBI chrNW_004624755:23,659,997...23,771,148
Ensembl chrNW_004624755:23,659,490...23,769,325 		JBrowse link
G Aif1 allograft inflammatory factor 1 located_in IEA
ISS		 TreeGrafter
UniProt		 GO_REF:0000024 GO_REF:0000118 NCBI chrNW_004624754:24,590,071...24,591,913
Ensembl chrNW_004624754:24,590,071...24,591,904 		JBrowse link
G Aif1l allograft inflammatory factor 1 like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:4,739,886...4,757,291
Ensembl chrNW_004624760:4,739,793...4,757,280 		JBrowse link
G Akap13 A-kinase anchoring protein 13 located_in ISO (MGI:5308772|PMID:20139090) UniProt PMID:20139090 MGI:5308772 NCBI chrNW_004624768:12,767,120...13,099,288
Ensembl chrNW_004624768:12,765,723...13,095,136 		JBrowse link
G Amot angiomotin located_in ISO (PMID:11257124) UniProt PMID:11257124 NCBI chrNW_004624803:2,405,037...2,491,715
Ensembl chrNW_004624803:2,422,274...2,488,097 		JBrowse link
G Anxa1 annexin A1 located_in ISO (PMID:22773844) BHF-UCL PMID:22773844 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198 		JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 located_in ISO (PMID:11691822) BHF-UCL PMID:11691822 NCBI chrNW_004624828:7,220,768...7,247,395
Ensembl chrNW_004624828:7,223,251...7,247,421 		JBrowse link
G Avil advillin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:10,134,518...10,154,274
Ensembl chrNW_004624802:10,134,556...10,154,324 		JBrowse link
G Cald1 caldesmon 1 ISO RGD PMID:3384851 RGD:2303065 NCBI chrNW_004624765:15,262,032...15,452,201
Ensembl chrNW_004624765:15,357,775...15,449,952 		JBrowse link
G Cd2ap CD2 associated protein is_active_in ISO (PMID:17606992) MGI PMID:17606992 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein located_in ISO (MGI:3765263|PMID:17956734) BHF-UCL PMID:17956734 MGI:3765263 NCBI chrNW_004624740:3,332,977...3,399,915 JBrowse link
G Coro1a coronin 1A located_in ISO (PMID:15800061) UniProt PMID:15800061 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357 		JBrowse link
G Coro1b coronin 1B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,080,541...19,087,128
Ensembl chrNW_004624767:19,080,451...19,090,419 		JBrowse link
G Cotl1 coactosin like F-actin binding protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:1,485,301...1,510,193
Ensembl chrNW_004624746:1,485,321...1,510,276 		JBrowse link
G Cttn cortactin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:16,842,341...16,884,449
Ensembl chrNW_004624767:16,847,459...16,880,183 		JBrowse link
G Dapk3 death associated protein kinase 3 ISO RGD PMID:10602480 RGD:8554171 NCBI chrNW_004624828:5,616,839...5,626,849
Ensembl chrNW_004624828:5,621,696...5,625,601 		JBrowse link
G Dbn1 drebrin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133 		JBrowse link
G Dbnl drebrin like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:7,950,552...7,960,592
Ensembl chrNW_004624740:7,950,556...7,960,568 		JBrowse link
G Diaph1 diaphanous related formin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:738,717...845,187
Ensembl chrNW_004624774:739,206...845,272 		JBrowse link
G Diaph3 diaphanous related formin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624748:20,937,242...21,439,554
Ensembl chrNW_004624748:21,045,085...21,383,605 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein located_in ISO RGD PMID:15506980 RGD:1624304 NCBI chrNW_004624839:3,495,580...3,899,009
Ensembl chrNW_004624839:3,509,441...3,899,162 		JBrowse link
G Dmtn dematin actin binding protein located_in ISO (PMID:22927433) UniProt PMID:22927433 NCBI chrNW_004624758:17,640,938...17,672,709
Ensembl chrNW_004624758:17,655,803...17,671,666 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 located_in ISO (PMID:17588722) UniProt PMID:17588722 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A located_in ISO (PMID:24327345) ARUK-UCL PMID:24327345 NCBI chrNW_004624745:26,180,858...26,316,848
Ensembl chrNW_004624745:26,180,864...26,315,234 		JBrowse link
G Ezr ezrin located_in ISO (PMID:11598191) HGNC-UCL PMID:11598191 NCBI chrNW_004624929:827,275...873,743
Ensembl chrNW_004624929:826,531...873,572 		JBrowse link
G Flna filamin A located_in ISO RGD PMID:15661894 PMID:22872576 RGD:2312435 RGD:7207404 NCBI chrNW_004624946:812,278...836,307
Ensembl chrNW_004624946:812,287...837,273 		JBrowse link
G Fmn1 formin 1 located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624804:1,124,322...1,558,781
Ensembl chrNW_004624804:1,155,071...1,558,145 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase located_in ISO (PMID:17623777) MGI PMID:17623777 NCBI chrNW_004624933:248,298...456,933
Ensembl chrNW_004624933:389,627...456,520 		JBrowse link
G Gas2 growth arrest specific 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:13,610,229...13,741,604
Ensembl chrNW_004624766:13,612,702...13,741,606 		JBrowse link
G Gas2l1 growth arrest specific 2 like 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:5,683,107...5,688,405
Ensembl chrNW_004624747:5,684,108...5,688,124 		JBrowse link
G Gas2l2 growth arrest specific 2 like 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624875:3,226,236...3,234,787 JBrowse link
G Gas2l3 growth arrest specific 2 like 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:7,168,516...7,206,331 JBrowse link
G Gas7 growth arrest specific 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:12,341,987...12,575,651
Ensembl chrNW_004624786:12,345,003...12,575,417 		JBrowse link
G Gck glucokinase located_in ISO in primary rat hepatocytes and transfected COS-7 cells RGD PMID:9109397 RGD:2301953 NCBI chrNW_004624740:7,844,496...7,885,900
Ensembl chrNW_004624740:7,852,390...7,886,758 		JBrowse link
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624903:388,935...399,793
Ensembl chrNW_004624903:388,866...400,607 		JBrowse link
G Gjb6 gap junction protein beta 6 located_in ISO (PMID:19285977) ARUK-UCL PMID:19285977 NCBI chrNW_004624776:17,477,947...17,487,304
Ensembl chrNW_004624776:17,477,966...17,487,303 		JBrowse link
G Gng12 G protein subunit gamma 12 located_in ISO RGD PMID:9492299 RGD:2314449 NCBI chrNW_004624742:27,652,114...27,721,668
Ensembl chrNW_004624742:27,700,538...27,718,555 		JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase located_in ISO (PMID:15998323) UniProt PMID:15998323 NCBI chrNW_004624741:456,186...494,207
Ensembl chrNW_004624741:455,696...493,821 		JBrowse link
G Hcls1 hematopoietic cell-specific Lyn substrate 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:26,528,163...26,559,108
Ensembl chrNW_004624731:26,528,097...26,560,695 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D ISO RGD PMID:15661894 RGD:2312435 NCBI chrNW_004624843:5,685,409...5,774,459
Ensembl chrNW_004624843:5,685,502...5,773,469 		JBrowse link
G Keap1 kelch like ECH associated protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:2,580,812...2,595,023
Ensembl chrNW_004624828:2,580,861...2,595,275 		JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624748:8,740,563...8,833,091
Ensembl chrNW_004624748:8,779,395...8,835,500 		JBrowse link
G Lmod1 leiomodin 1 located_in ISO PMID:10520227 UniProt PMID:10520227 RGD:11344950 NCBI chrNW_004624807:8,834,462...8,880,048
Ensembl chrNW_004624807:8,833,926...8,881,702 		JBrowse link
G Lmod2 leiomodin 2 located_in ISO (PMID:26370058) UniProt PMID:26370058 NCBI chrNW_004624783:12,337,554...12,345,712
Ensembl chrNW_004624783:12,336,535...12,345,781 		JBrowse link
G LOC101702197 tropomyosin alpha-3 chain pseudogene located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624868:4,519,513...4,520,268 JBrowse link
G LOC101713035 tropomyosin alpha-3 chain located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:13,880,179...13,881,206 JBrowse link
G LOC101721424 tropomyosin alpha-4 chain located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:2,278,630...2,289,775 JBrowse link
G LOC101721693 actin, muscle located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:51,416...53,354 JBrowse link
G Mark2 microtubule affinity regulating kinase 2 located_in ISO (PMID:23902687) UniProt PMID:23902687 NCBI chrNW_004624767:22,346,467...22,419,325 JBrowse link
G Mical1 microtubule associated monooxygenase, calponin and LIM domain containing 1 is_active_in ISO (PMID:33393173) UniProt PMID:33393173 NCBI chrNW_004624916:701,118...712,254
Ensembl chrNW_004624916:701,249...710,148 		JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 is_active_in ISO (PMID:29343822) UniProt PMID:29343822 NCBI chrNW_004624766:4,167,480...4,300,528
Ensembl chrNW_004624766:4,167,433...4,300,641 		JBrowse link
G Misp mitotic spindle positioning located_in ISO (PMID:23574715) UniProt PMID:23574715 NCBI chrNW_004624828:7,800,424...7,812,035 JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:21598299 RGD:12798522 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669 		JBrowse link
G Myo1b myosin IB located_in ISO (PMID:16219689) UniProt PMID:16219689 NCBI chrNW_004624854:4,738,061...4,896,030 JBrowse link
G Myo5a myosin VA located_in ISO (PMID:24006491) UniProt PMID:24006491 NCBI chrNW_004624731:8,114,557...8,280,586
Ensembl chrNW_004624731:8,113,715...8,280,823 		JBrowse link
G Myo6 myosin VI located_in ISO (PMID:12857860) UniProt PMID:12857860 NCBI chrNW_004624819:2,835,783...2,999,819
Ensembl chrNW_004624819:2,896,374...2,999,819 		JBrowse link
G Myo9a myosin IXA located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:1,900,669...2,179,269
Ensembl chrNW_004624781:1,967,671...2,175,150 		JBrowse link
G Myo9b myosin IXB located_in ISO (PMID:16338935), (PMID:16616011), (PMID:8907710) UniProt
RGD		 PMID:8907710 PMID:9348541 PMID:16338935 PMID:16616011 RGD:1581711 NCBI chrNW_004624908:689,373...751,851
Ensembl chrNW_004624908:690,153...740,502 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 located_in ISO (PMID:9395435) UniProt PMID:9395435 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918 		JBrowse link
G Palld palladin, cytoskeletal associated protein located_in ISO (PMID:11598191) HGNC-UCL PMID:11598191 NCBI chrNW_004624769:150,800...560,163
Ensembl chrNW_004624769:150,738...559,045 		JBrowse link
G Pawr pro-apoptotic WT1 regulator located_in ISO PMID:16229834 UniProt
RGD		 PMID:15817164 PMID:16229834 RGD:8554822 RGD:9835355 NCBI chrNW_004624750:18,562,270...18,710,397
Ensembl chrNW_004624750:18,562,221...18,705,540 		JBrowse link
G Pls3 plastin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624940:120,073...216,522
Ensembl chrNW_004624940:120,073...216,622 		JBrowse link
G Pof1b POF1B actin binding protein located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624852:3,022,251...3,136,807
Ensembl chrNW_004624852:3,022,251...3,134,418 		JBrowse link
G Pstpip1 proline-serine-threonine phosphatase interacting protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624894:1,369,242...1,400,765
Ensembl chrNW_004624894:1,368,455...1,400,340 		JBrowse link
G Pstpip2 proline-serine-threonine phosphatase interacting protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624778:9,629,841...9,761,005
Ensembl chrNW_004624778:9,628,340...9,760,963 		JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO RGD PMID:8864660 RGD:5688126 NCBI chrNW_004624802:11,360,056...11,392,911
Ensembl chrNW_004624802:11,360,041...11,395,390 		JBrowse link
G Rac1 Rac family small GTPase 1 located_in ISO (PMID:19625648) UniProt PMID:19625648 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025 		JBrowse link
G Rac2 Rac family small GTPase 2 located_in ISO (PMID:19625648) UniProt PMID:19625648 NCBI chrNW_004624752:10,589,017...10,620,652
Ensembl chrNW_004624752:10,589,017...10,601,661 		JBrowse link
G Rhoq ras homolog family member Q located_in ISO (PMID:10445846) BHF-UCL PMID:10445846 NCBI chrNW_004624738:27,997,493...28,031,840 JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:28,245,140...28,439,705
Ensembl chrNW_004624742:28,247,127...28,439,482 		JBrowse link
G Sh2b2 SH2B adaptor protein 2 located_in ISO (PMID:14993264) MGI PMID:14993264 NCBI chrNW_004624740:15,266,759...15,289,420
Ensembl chrNW_004624740:15,266,653...15,278,165 		JBrowse link
G Shroom4 shroom family member 4 located_in ISO (PMID:16249884), (PMID:16684770) UniProt PMID:16249884 PMID:16684770 NCBI chrNW_004624893:2,373,847...2,660,122
Ensembl chrNW_004624893:2,373,815...2,660,199 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 located_in ISO (MGI:2181223|PMID:11807096) BHF-UCL PMID:11807096 MGI:2181223 NCBI chrNW_004624925:454,092...529,122
Ensembl chrNW_004624925:454,134...529,108 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase located_in ISO (PMID:17623777) MGI PMID:17623777 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
G Tek TEK receptor tyrosine kinase located_in ISO (PMID:18425119) UniProt PMID:18425119 NCBI chrNW_004624736:31,345,774...31,473,727 JBrowse link
G Tfpt TCF3 fusion partner located_in ISO PMID:16229834 UniProt PMID:16229834 RGD:8554822 NCBI chrNW_004624832:2,455,643...2,459,379
Ensembl chrNW_004624832:2,455,422...2,459,367 		JBrowse link
G Tmod1 tropomodulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:3,229,095...3,299,709
Ensembl chrNW_004624825:3,228,305...3,299,799 		JBrowse link
G Tpm3 tropomyosin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:3,109,360...3,139,664
Ensembl chrNW_004624885:3,109,436...3,139,789 		JBrowse link
G Tsc1 TSC complex subunit 1 located_in ISO (PMID:10806479) UniProt PMID:10806479 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011 		JBrowse link
G Twf1 twinfilin actin binding protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:8,765,937...8,780,301
Ensembl chrNW_004624816:8,765,922...8,778,396 		JBrowse link
G Vcl vinculin located_in ISO RGD PMID:15506980 RGD:1624304 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108 		JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,452,811...14,464,965
Ensembl chrNW_004624784:14,452,817...14,464,965 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes located_in ISO (PMID:14668490) MGI PMID:14668490 NCBI chrNW_004624741:3,959,561...3,991,191
Ensembl chrNW_004624741:3,959,363...3,991,191 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes located_in ISO (PMID:14668490) MGI PMID:14668490 NCBI chrNW_004624804:8,148,920...8,157,552
Ensembl chrNW_004624804:8,148,180...8,157,552 		JBrowse link
G Was WASP actin nucleation promoting factor located_in ISO (PMID:8625410) CAFA PMID:8625410 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482 		JBrowse link
G Whrn whirlin located_in ISO (PMID:12833159) MGI PMID:12833159 NCBI chrNW_004624760:20,700,632...20,788,628
Ensembl chrNW_004624760:20,700,593...20,788,628 		JBrowse link
G Wipf1 WAS/WASL interacting protein family member 1 located_in ISO (PMID:22966049) RGD
MGI		 PMID:11687573 PMID:22966049 RGD:634538 NCBI chrNW_004624787:11,787,384...11,908,727
Ensembl chrNW_004624787:11,787,295...11,822,523 		JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase located_in ISO (PMID:17623777) MGI PMID:17623777 NCBI chrNW_004624770:11,190,103...11,275,823
Ensembl chrNW_004624770:11,190,595...11,221,512 		JBrowse link
actin filament branch point term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:18256280 RGD:2306202 NCBI chrNW_004624823:6,774,855...6,804,219 JBrowse link
filamentous actin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512 		JBrowse link
G Actg1 actin gamma 1 part_of ISO (PMID:18796539) MGI PMID:18796539 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 located_in ISO (PMID:25753423) UniProt PMID:25753423 NCBI chrNW_004624828:7,220,768...7,247,395
Ensembl chrNW_004624828:7,223,251...7,247,421 		JBrowse link
G Arpc2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:10797548 RGD:11049163 NCBI chrNW_004624823:6,774,855...6,804,219 JBrowse link
G Arpc3 actin related protein 2/3 complex subunit 3 ISO RGD PMID:10797548 RGD:11049163 NCBI chrNW_004624747:21,438,602...21,451,154
Ensembl chrNW_004624747:21,438,612...21,454,753 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 part_of ISO (PMID:19116644) MGI PMID:19116644 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366 		JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 part_of ISO (MGI:3588909|PMID:16054028) UniProt PMID:16054028 MGI:3588909 NCBI chrNW_004624756:1,446,633...1,751,043
Ensembl chrNW_004624756:1,446,200...1,751,211 		JBrowse link
G Cd2ap CD2 associated protein part_of ISO (PMID:10339567) UniProt PMID:10339567 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523 		JBrowse link
G Diaph3 diaphanous related formin 3 part_of ISO (PMID:18835565) MGI PMID:18835565 NCBI chrNW_004624748:20,937,242...21,439,554
Ensembl chrNW_004624748:21,045,085...21,383,605 		JBrowse link
G Dpysl3 dihydropyrimidinase like 3 part_of ISO PMID:16181627 UniProt PMID:16181627 RGD:8553533 NCBI chrNW_004624774:6,836,198...6,943,528
Ensembl chrNW_004624774:6,835,299...6,943,552 		JBrowse link
G Dusp22 dual specificity phosphatase 22 part_of ISO (PMID:20018849) ARUK-UCL PMID:20018849 NCBI chrNW_004624756:23,968,148...24,017,340
Ensembl chrNW_004624756:23,968,017...24,017,332 		JBrowse link
G Ehbp1 EH domain binding protein 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:10,391,139...10,752,562
Ensembl chrNW_004624762:10,392,088...10,751,055 		JBrowse link
G Ehbp1l1 EH domain binding protein 1 like 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:20,800,254...20,821,165 JBrowse link
G Espn espin part_of ISO PMID:8799813 UniProt PMID:8799813 RGD:632658 NCBI chrNW_004624818:5,015,275...5,042,862
Ensembl chrNW_004624818:5,016,019...5,042,724 		JBrowse link
G Jam3 junctional adhesion molecule 3 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351 		JBrowse link
G Kptn kaptin, actin binding protein located_in ISO (PMID:24239382) UniProt PMID:24239382 NCBI chrNW_004624832:6,325,032...6,331,915
Ensembl chrNW_004624832:6,325,107...6,331,713 		JBrowse link
G Ldb3 LIM domain binding 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624841:426,300...471,855
Ensembl chrNW_004624841:426,330...471,682 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 part_of ISO (PMID:25224220) MGI PMID:25224220 NCBI chrNW_004624759:2,360,655...2,429,189
Ensembl chrNW_004624759:2,363,076...2,428,273 		JBrowse link
G Myo18b myosin XVIIIB part_of ISO (PMID:18761673) MGI PMID:18761673 NCBI chrNW_004624747:2,337,892...2,630,397
Ensembl chrNW_004624747:2,338,528...2,578,637 		JBrowse link
G Myo1a myosin IA part_of ISO (PMID:9858156) UniProt PMID:9858156 NCBI chrNW_004624802:10,892,685...10,913,953
Ensembl chrNW_004624802:10,892,774...10,913,952 		JBrowse link
G Myo1c myosin IC part_of ISO (PMID:9858156) UniProt PMID:9858156 NCBI chrNW_004624786:4,188,143...4,211,712
Ensembl chrNW_004624786:4,188,143...4,211,732 		JBrowse link
G Myo1f myosin IF part_of ISO (PMID:17023661) MGI PMID:17023661 NCBI chrNW_004624828:1,269,287...1,307,676
Ensembl chrNW_004624828:1,269,610...1,307,443 		JBrowse link
G Myo3a myosin IIIA part_of ISO (PMID:12672820) UniProt PMID:12672820 NCBI chrNW_004624796:2,774,153...2,983,853 JBrowse link
G Myo6 myosin VI part_of ISO (PMID:10519557)
(PMID:9852149)		 UniProt PMID:9852149 PMID:10519557 NCBI chrNW_004624819:2,835,783...2,999,819
Ensembl chrNW_004624819:2,896,374...2,999,819 		JBrowse link
G Nckap1 NCK associated protein 1 part_of ISO (MGI:5897521|PMID:27927633) BHF-UCL PMID:27927633 MGI:5897521 NCBI chrNW_004624844:4,679,840...4,773,617
Ensembl chrNW_004624844:4,676,741...4,773,538 		JBrowse link
G Pdlim1 PDZ and LIM domain 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:6,485,607...6,530,511
Ensembl chrNW_004624737:6,485,607...6,530,526 		JBrowse link
G Pdlim2 PDZ and LIM domain 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:18,085,818...18,098,621 JBrowse link
G Pdlim3 PDZ and LIM domain 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:16,341,297...16,374,106
Ensembl chrNW_004624769:16,340,494...16,374,208 		JBrowse link
G Pdlim4 PDZ and LIM domain 4 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624733:39,826,435...39,840,280
Ensembl chrNW_004624733:39,825,025...39,840,361 		JBrowse link
G Pdlim5 PDZ and LIM domain 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:22,332,479...22,597,312
Ensembl chrNW_004624757:22,332,505...22,597,586 		JBrowse link
G Pdlim7 PDZ and LIM domain 7 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:12,591,883...12,607,992
Ensembl chrNW_004624733:12,591,883...12,607,992 		JBrowse link
G Rac3 Rac family small GTPase 3 part_of ISO (PMID:16525025) MGI PMID:16525025 NCBI chrNW_004624801:10,862,490...10,864,856
Ensembl chrNW_004624801:10,862,502...10,864,879 		JBrowse link
G Smtn smoothelin part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:7,559,364...7,582,080
Ensembl chrNW_004624747:7,559,026...7,585,154 		JBrowse link
G Smtnl1 smoothelin like 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624864:3,114,210...3,121,831 JBrowse link
G Smtnl2 smoothelin like 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:7,174,460...7,196,917
Ensembl chrNW_004624786:7,174,469...7,198,583 		JBrowse link
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624877:4,499,581...4,886,580 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:9,687,369...9,837,344
Ensembl chrNW_004624747:9,705,081...9,837,535 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15756
    cellular anatomical entity 15656
      supramolecular complex 1166
        supramolecular polymer 851
          supramolecular fiber 844
            polymeric cytoskeletal fiber 610
              actin filament 128
                actin filament branch point 1
                actin filament of cell cortex of cell tip 0
                actomyosin contractile ring actin filament 0
                filamentous actin 37
Path 2
Term Annotations click to browse term
  cellular_component 15756
    cellular anatomical entity 15656
      organelle 11439
        non-membrane-bounded organelle 4235
          intracellular non-membrane-bounded organelle 4235
            cytoskeleton 1983
              actin cytoskeleton 481
                actin filament 128
                  actin filament branch point 1
                  actin filament of cell cortex of cell tip 0
                  actomyosin contractile ring actin filament 0
                  filamentous actin 37
paths to the root