Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cytoplasmic microtubule
go back to main search page
Accession:GO:0005881 term browser browse the term
Definition:Any microtubule in the cytoplasm of a cell.
Synonyms:narrow_synonym: non-spindle-associated astral microtubule


show annotations for term's descendants           Sort by:
cytoplasmic microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway located_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 located_in ISO
IBA		 (PMID:10644998), (PMID:11691822), (PMID:25753423)
GO_REF:0000033		 RGD
GO_Central		 PMID:10644998 PMID:11691822 PMID:25753423 GO_REF:0000033 NCBI chr 7:9,392,336...9,414,364
Ensembl chr 7:9,392,336...9,414,310 		JBrowse link
G Arhgap18 Rho GTPase activating protein 18 part_of ISO (PMID:28251925) RGD PMID:28251925 NCBI chr 1:18,403,531...18,637,306
Ensembl chr 1:18,403,537...18,637,256 		JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12417528)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12417528 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:245,400,659...245,446,673
Ensembl chr 1:245,400,550...245,446,820 		JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor located_in ISO (MGI:5582152|PMID:22300583) RGD PMID:22300583 MGI:5582152 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080 		JBrowse link
G Bcl10 BCL10, immune signaling adaptor located_in ISS
ISO		 GO_REF:0000024
(PMID:23264731)		 UniProt
RGD		 PMID:23264731 GO_REF:0000024 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523 		JBrowse link
G Bicd1 BICD cargo adaptor 1 located_in ISO (PMID:20089649) RGD PMID:20089649 NCBI chr 4:182,479,071...182,631,504
Ensembl chr 4:182,479,071...182,627,434 		JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 located_in ISS
ISO		 GO_REF:0000024
(PMID:9859993)		 UniProt
RGD		 PMID:9859993 GO_REF:0000024 NCBI chr10:103,072,530...103,081,382
Ensembl chr10:103,073,408...103,081,380 		JBrowse link
G Bysl bystin-like IDA RGD PMID:15305856 RGD:2316201 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339 		JBrowse link
G Cfap96 cilia and flagella associated protein 96 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr16:46,291,075...46,315,616
Ensembl chr16:46,291,311...46,315,625 		JBrowse link
G Cimap1d CIMAP1 family member D located_in
is_active_in		 ISO
IBA		 (PMID:23264731)
GO_REF:0000033		 RGD
GO_Central		 PMID:23264731 GO_REF:0000033 NCBI chr 7:10,049,472...10,065,626
Ensembl chr 7:10,059,589...10,065,125 		JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 located_in
is_active_in		 ISO
IBA		 (PMID:11290329)
GO_REF:0000033		 RGD
GO_Central		 PMID:11290329 GO_REF:0000033 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in
is_active_in		 ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:11290329)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:11290329 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731 		JBrowse link
G Clip1 CAP-GLY domain containing linker protein 1 located_in IDA PMID:11290329 UniProt PMID:11290329 RGD:68300 NCBI chr12:32,910,932...33,017,891
Ensembl chr12:32,910,977...33,017,884 		JBrowse link
G Clip2 CAP-GLY domain containing linker protein 2 located_in IDA PMID:11290329 RGD
UniProt		 PMID:9427243 PMID:11290329 RGD:61566, RGD:68300 NCBI chr12:22,163,044...22,227,023
Ensembl chr12:22,163,218...22,227,023 		JBrowse link
G Clmp CXADR-like membrane protein located_in ISO
IEA
ISS		 (PMID:23264731)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23264731 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:41,060,527...41,168,841
Ensembl chr 8:41,060,799...41,168,838 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase located_in ISS
ISO		 GO_REF:0000024
(PMID:17495026)		 UniProt
RGD		 PMID:17495026 GO_REF:0000024 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase located_in ISO
ISS		 (PMID:23264731)
GO_REF:0000024		 RGD
UniProt		 PMID:23264731 GO_REF:0000024 NCBI chr10:106,006,404...106,008,293 JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 located_in
is_active_in		 ISO (PMID:17974961) RGD PMID:17974961 NCBI chr 4:178,143,499...178,179,871
Ensembl chr 4:178,143,500...178,179,980 		JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:129,615,208...129,680,888
Ensembl chr 6:129,609,397...129,680,883 		JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 located_in ISO
IEA		 (PMID:21262767)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262767 GO_REF:0000107 NCBI chr 1:46,887,017...46,893,956
Ensembl chr 1:46,887,017...46,893,881 		JBrowse link
G Enkd1 enkurin domain containing 1 located_in
is_active_in		 ISO
IBA		 (PMID:23264731)
GO_REF:0000033		 RGD
GO_Central		 PMID:23264731 GO_REF:0000033 NCBI chr19:33,592,074...33,596,552
Ensembl chr19:33,592,078...33,596,545 		JBrowse link
G Fam161b FAM161 centrosomal protein B located_in ISO (PMID:22791751) RGD PMID:22791751 NCBI chr 6:103,990,603...104,007,754
Ensembl chr 6:103,992,170...104,018,776 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,232,735...17,330,574
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Fhdc1 FH2 domain containing 1 located_in ISO (MGI:6201777|PMID:26564798), (MGI:6201846|PMID:29742020) RGD PMID:26564798 PMID:29742020 MGI:6201777 MGI:6201846 NCBI chr 2:169,790,917...169,829,580
Ensembl chr 2:169,790,947...169,827,896 		JBrowse link
G Gramd2b GRAM domain containing 2B located_in
is_active_in		 ISO
IBA
IEA
ISS		 (PMID:23264731)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:23264731 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr18:49,884,014...49,981,955
Ensembl chr18:49,884,014...49,981,953 		JBrowse link
G Gtse1 G-2 and S-phase expressed 1 located_in
is_active_in		 ISO
IBA		 (PMID:10974554)
GO_REF:0000033		 RGD
GO_Central		 PMID:10974554 GO_REF:0000033 NCBI chr 7:116,949,997...116,966,826
Ensembl chr 7:116,950,053...116,966,806 		JBrowse link
G Hid1 HID1 domain containing located_in ISO (PMID:23264731) RGD PMID:23264731 NCBI chr10:100,589,555...100,610,050
Ensembl chr10:100,589,555...100,610,041 		JBrowse link
G Kif2c kinesin family member 2C located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:130,637,347...130,662,680
Ensembl chr 5:130,637,347...130,662,637 		JBrowse link
G Map10 microtubule-associated protein 10 located_in
is_active_in		 ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:23264731)		 UniProt
GO_Central
RGD		 PMID:23264731 GO_REF:0000024 GO_REF:0000033 NCBI chr19:53,642,156...53,644,948
Ensembl chr19:53,642,156...53,644,948 		JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983 		JBrowse link
G Mapre2 microtubule-associated protein, RP/EB family, member 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:15,028,675...15,169,553
Ensembl chr18:15,029,041...15,168,044 		JBrowse link
G Mapre3 microtubule-associated protein, RP/EB family, member 3 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:10644998)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:10644998 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:25,513,800...25,558,876
Ensembl chr 6:25,513,800...25,558,881 		JBrowse link
G Mid1 midline 1 located_in ISO (PMID:18949047) RGD PMID:18949047 NCBI chr  X:24,116,674...24,491,205
Ensembl chr  X:24,120,293...24,248,353 		JBrowse link
G Mtus2 microtubule associated scaffold protein 2 located_in ISO (PMID:19543227) RGD PMID:19543227 NCBI chr12:6,706,531...7,078,331
Ensembl chr12:6,706,532...7,078,331 		JBrowse link
G Nin ninein located_in ISO (PMID:27565344) RGD PMID:27565344 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Rab3d RAB3D, member RAS oncogene family located_in ISO (PMID:21262767) RGD PMID:21262767 NCBI chr 8:20,438,622...20,449,269
Ensembl chr 8:20,439,294...20,449,185 		JBrowse link
G Reep1 receptor accessory protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:103,746,004...103,862,347
Ensembl chr 4:103,745,633...103,862,338 		JBrowse link
G Reep2 receptor accessory protein 2 located_in ISO (PMID:23264731) RGD PMID:23264731 NCBI chr18:26,438,130...26,447,165
Ensembl chr18:26,438,346...26,447,161 		JBrowse link
G Reep3 receptor accessory protein 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697 		JBrowse link
G Reep4 receptor accessory protein 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526 		JBrowse link
G Sctr secretin receptor located_in ISO
IEA
ISS		 (PMID:23264731)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23264731 GO_REF:0000024 GO_REF:0000107 NCBI chr13:31,127,781...31,190,162
Ensembl chr13:31,127,858...31,180,189 		JBrowse link
G Selenos selenoprotein S located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23264731)		 UniProt
Ensembl
RGD		 PMID:23264731 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:119,659,779...119,669,546
Ensembl chr 1:119,659,751...119,669,833 		JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 located_in ISO
IEA
ISS		 (PMID:23264731)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23264731 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:142,757,254...142,761,243
Ensembl chr 2:142,757,270...142,761,116 		JBrowse link
G Snph syntaphilin located_in
is_active_in		 ISO
IBA
IEA
ISS		 (PMID:23264731)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:23264731 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:140,098,540...140,139,342
Ensembl chr 3:140,099,708...140,139,453 		JBrowse link
G Spaca9 sperm acrosome associated 9 located_in ISO (PMID:23264731) RGD PMID:23264731 NCBI chr 3:12,019,376...12,028,801
Ensembl chr 3:12,019,363...12,029,119 		JBrowse link
G Srprb SRP receptor subunit beta located_in ISS
ISO		 GO_REF:0000024
(PMID:23264731)		 UniProt
RGD		 PMID:23264731 GO_REF:0000024 NCBI chr 8:103,768,685...103,782,632 JBrowse link
G Sybu syntabulin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:75,847,000...75,948,919
Ensembl chr 7:75,847,003...75,948,828 		JBrowse link
G Synj2 synaptojanin 2 IDA in the microtubular manchette formation surrounding spermatid nuclei RGD PMID:11498538 RGD:628465 NCBI chr 1:46,518,594...46,621,919
Ensembl chr 1:46,518,709...46,633,687 		JBrowse link
G Synj2_v2 synaptojanin 2, variant 2 IDA RGD PMID:11498538 RGD:628465
G Synj2_v3 synaptojanin 2, variant 3 IDA RGD PMID:11498538 RGD:628465
G Tmem214 transmembrane protein 214 located_in ISO
ISS		 (PMID:23264731)
GO_REF:0000024		 RGD
UniProt		 PMID:23264731 GO_REF:0000024 NCBI chr 6:25,501,575...25,510,444
Ensembl chr 6:25,502,698...25,510,444 		JBrowse link
G Togaram1 TOG array regulator of axonemal microtubules 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:83,019,025...83,083,343
Ensembl chr 6:83,018,859...83,082,807 		JBrowse link
G Togaram2 TOG array regulator of axonemal microtubules 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:23,770,979...23,828,884
Ensembl chr 6:23,771,052...23,828,499 		JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 located_in ISO (PMID:15162379) RGD PMID:15162379 NCBI chr15:51,156,728...51,159,629
Ensembl chr15:51,146,154...51,159,625 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 located_in IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517 		JBrowse link
G Tuba1a tubulin, alpha 1A located_in ISO (PMID:17686994), (PMID:19103752) RGD PMID:17686994 PMID:19103752 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Tuba1b tubulin, alpha 1B located_in ISO (PMID:19103752) RGD PMID:19103752 NCBI chr 7:130,090,663...130,093,644
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Tuba1c tubulin, alpha 1C located_in ISO (PMID:19103752) RGD PMID:19103752 NCBI chr 7:130,192,050...130,199,655
Ensembl chr 7:130,192,016...130,199,647
Ensembl chr  X:130,192,016...130,199,647 		JBrowse link
G Tubg1 tubulin, gamma 1 located_in ISO (PMID:14667810), (PMID:18347012) RGD PMID:14667810 PMID:18347012 NCBI chr10:86,052,845...86,059,436
Ensembl chr10:86,052,743...86,059,433 		JBrowse link
G Tubg2 tubulin, gamma 2 located_in ISO (PMID:14667810) RGD PMID:14667810 NCBI chr10:86,091,205...86,108,053
Ensembl chr10:86,091,188...86,097,580 		JBrowse link
A axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap206 cilia and flagella associated protein 206 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090 		JBrowse link
astral microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam161a FAM161 centrosomal protein A located_in ISO
IEA		 (PMID:22791751)
GO_REF:0000107		 RGD
Ensembl		 PMID:22791751 GO_REF:0000107 NCBI chr14:97,009,449...97,027,865
Ensembl chr14:97,009,491...97,028,588 		JBrowse link
G Kif18b kinesin family member 18B located_in ISO (PMID:21820309) RGD PMID:21820309 NCBI chr10:87,870,424...87,889,895
Ensembl chr10:87,870,428...87,889,850 		JBrowse link
G Map9 microtubule-associated protein 9 located_in
is_active_in		 ISO
IBA		 (PMID:16049101)
(PMID:18782428)
GO_REF:0000033		 RGD
GO_Central		 PMID:16049101 PMID:18782428 GO_REF:0000033 NCBI chr 2:167,708,661...167,743,927
Ensembl chr 2:167,708,765...167,740,736 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in ISO (PMID:11940666) RGD PMID:11940666 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
axonemal A tubule inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap107 cilia and flagella associated protein 107 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 5:156,212,385...156,231,481
Ensembl chr 5:156,212,385...156,231,481 		JBrowse link
G Cfap141 cilia and flagella associated protein 141 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 2:175,507,628...175,510,662
Ensembl chr 2:175,507,628...175,510,662 		JBrowse link
G Cfap161 cilia and flagella associated protein 161 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 1:137,743,783...137,768,685
Ensembl chr 1:137,743,784...137,768,730 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318 		JBrowse link
G Cfap68 cilia and flagella associated protein 68 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 8:51,107,663...51,113,192
Ensembl chr 8:51,107,721...51,113,420 		JBrowse link
G Cfap95 cilia and flagella associated protein 95 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 1:221,123,786...221,242,963
Ensembl chr 1:221,131,813...221,242,963 		JBrowse link
G Cimip2a ciliary microtubule inner protein 2A is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 3:8,030,548...8,038,370
Ensembl chr 3:8,033,246...8,037,961 		JBrowse link
G Cimip2c ciliary microtubule inner protein 2C is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 6:25,905,294...25,923,615
Ensembl chr 6:25,905,294...25,923,615 		JBrowse link
G Dusp21 dual specificity phosphatase 21 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr  X:4,488,021...4,488,877
Ensembl chr  X:4,488,021...4,488,877 		JBrowse link
G Efcab6 EF-hand calcium binding domain 6 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 7:115,018,971...115,200,121
Ensembl chr 7:115,019,010...115,206,092 		JBrowse link
G Efhb EF hand domain family, member B is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 9:6,372,191...6,441,678
Ensembl chr 9:6,372,194...6,441,919 		JBrowse link
G Efhc1 EF-hand domain containing 1 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283 		JBrowse link
G Efhc2 EF-hand domain containing 2 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr  X:5,360,499...5,564,004
Ensembl chr  X:5,360,617...5,560,970 		JBrowse link
G Mns1 meiosis-specific nuclear structural 1 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925 		JBrowse link
G Nme7 NME/NM23 family member 7 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Pierce1 piercer of microtubule wall 1 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
G Pierce2 piercer of microtubule wall 2 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 8:73,715,383...73,719,849
Ensembl chr 8:73,715,383...73,719,849 		JBrowse link
G Ribc1 RIB43A domain with coiled-coils 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:37295417)		 Ensembl
RGD		 PMID:37295417 GO_REF:0000107 NCBI chr  X:21,091,717...21,103,688
Ensembl chr  X:21,091,717...21,103,200 		JBrowse link
G Ribc2 RIB43A domain with coiled-coils 2 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 7:116,242,863...116,257,868
Ensembl chr 7:116,242,863...116,257,863 		JBrowse link
G Saxo4 stabilizer of axonemal microtubules 4 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 1:207,113,807...207,122,378
Ensembl chr 1:207,113,809...207,122,358 		JBrowse link
G Spag8 sperm associated antigen 8 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 5:57,901,681...57,903,894
Ensembl chr 5:57,901,682...57,903,894 		JBrowse link
G Spmip11 sperm microtubule inner protein 11 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 7:129,720,950...129,742,485
Ensembl chr 7:129,720,950...129,742,485 		JBrowse link
G Spmip5 sperm microtubule inner protein 5 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 1:257,926,555...257,934,873
Ensembl chr 1:257,926,388...257,934,399 		JBrowse link
G Spmip6 sperm microtubule inner protein 6 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 5:56,666,160...56,678,865
Ensembl chr 5:56,666,058...56,678,923 		JBrowse link
G Spmip8 sperm microtubule inner protein 8 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr19:9,713,281...9,722,257
Ensembl chr19:9,712,641...9,722,257 		JBrowse link
G Spmip9 sperm microtubule inner protein 9 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 4:102,885,695...102,892,934
Ensembl chr 4:102,885,695...102,892,934 		JBrowse link
G Tekt1 tektin 1 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr10:56,952,164...56,980,572
Ensembl chr10:56,952,167...56,980,572 		JBrowse link
G Tekt2 tektin 2 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 5:138,619,665...138,623,301
Ensembl chr 5:138,619,667...138,623,204 		JBrowse link
G Tekt3 tektin 3 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr10:47,729,635...47,763,589
Ensembl chr10:47,729,635...47,763,588 		JBrowse link
G Tekt4 tektin 4 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr10:14,487,760...14,492,936
Ensembl chr10:14,487,760...14,492,936 		JBrowse link
G Tekt5 tektin 5 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr10:5,279,856...5,316,619
Ensembl chr10:5,279,893...5,316,619 		JBrowse link
G Tektip1 tektin bundle interacting protein 1 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 7:8,345,667...8,347,429
Ensembl chr 7:8,345,303...8,347,429 		JBrowse link
axonemal B tubule inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap126 cilia and flagella associated protein 126 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr13:83,526,657...83,542,552
Ensembl chr13:83,526,657...83,542,552 		JBrowse link
G Cfap144 cilia and flagella associated protein 144 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr10:43,509,823...43,519,693
Ensembl chr10:43,509,826...43,520,086 		JBrowse link
G Cfap20 cilia and flagella associated protein 20 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr19:9,608,867...9,622,558
Ensembl chr19:9,608,859...9,622,558 		JBrowse link
G Cfap210 cilia and flagella associated protein 210 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 3:54,520,455...54,554,677
Ensembl chr 3:54,520,458...54,554,607 		JBrowse link
G Cfap276 cilia and flagella associated protein 276 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 2:196,166,009...196,177,919
Ensembl chr 2:196,166,009...196,177,919 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr10:52,613,761...52,654,922
Ensembl chr10:52,613,762...52,654,934 		JBrowse link
G Cfap77 cilia and flagella associated protein 77 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 3:12,258,453...12,381,319
Ensembl chr 3:12,258,453...12,381,319 		JBrowse link
G Cfap90 cilia and flagella associated protein 90 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 1:34,825,894...34,849,916
Ensembl chr 1:34,825,894...34,850,138 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr17:83,690,105...83,714,756
Ensembl chr17:83,690,797...83,714,408 		JBrowse link
G Pacrg parkin coregulated is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 1:49,882,671...50,305,564
Ensembl chr 1:49,882,630...50,305,430 		JBrowse link
G Spmip10 sperm microtubule inner protein 10 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr18:50,070,610...50,073,942
Ensembl chr18:50,070,610...50,073,942 		JBrowse link
G Tektl1 tektin like 1 is_active_in ISO (PMID:37295417) RGD PMID:37295417 NCBI chr 7:10,900,449...10,907,673
Ensembl chr 7:10,902,182...10,907,671 		JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 located_in IDA PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chr 3:155,547,504...155,633,652
Ensembl chr 3:155,547,538...155,630,856 		JBrowse link
G Cep162 centrosomal protein 162 located_in
is_active_in		 ISO
IBA
IEA
ISS		 (PMID:23644468)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:23644468 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:88,149,726...88,208,249
Ensembl chr 8:88,149,726...88,206,830 		JBrowse link
G Cfap107 cilia and flagella associated protein 107 located_in
is_active_in		 ISO
IBA		 (PMID:36191189)
GO_REF:0000033		 RGD
GO_Central		 PMID:36191189 GO_REF:0000033 NCBI chr 5:156,212,385...156,231,481
Ensembl chr 5:156,212,385...156,231,481 		JBrowse link
G Cfap126 cilia and flagella associated protein 126 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr13:83,526,657...83,542,552
Ensembl chr13:83,526,657...83,542,552 		JBrowse link
G Cfap141 cilia and flagella associated protein 141 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 2:175,507,628...175,510,662
Ensembl chr 2:175,507,628...175,510,662 		JBrowse link
G Cfap144 cilia and flagella associated protein 144 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr10:43,509,823...43,519,693
Ensembl chr10:43,509,826...43,520,086 		JBrowse link
G Cfap161 cilia and flagella associated protein 161 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 1:137,743,783...137,768,685
Ensembl chr 1:137,743,784...137,768,730 		JBrowse link
G Cfap20 cilia and flagella associated protein 20 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:36191189)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:36191189 GO_REF:0000024 GO_REF:0000107 NCBI chr19:9,608,867...9,622,558
Ensembl chr19:9,608,859...9,622,558 		JBrowse link
G Cfap210 cilia and flagella associated protein 210 located_in
is_active_in		 ISO
IBA		 (PMID:36191189)
GO_REF:0000033		 RGD
GO_Central		 PMID:36191189 GO_REF:0000033 NCBI chr 3:54,520,455...54,554,677
Ensembl chr 3:54,520,458...54,554,607 		JBrowse link
G Cfap276 cilia and flagella associated protein 276 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 2:196,166,009...196,177,919
Ensembl chr 2:196,166,009...196,177,919 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr10:52,613,761...52,654,922
Ensembl chr10:52,613,762...52,654,934 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318 		JBrowse link
G Cfap77 cilia and flagella associated protein 77 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 3:12,258,453...12,381,319
Ensembl chr 3:12,258,453...12,381,319 		JBrowse link
G Cfap95 cilia and flagella associated protein 95 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 1:221,123,786...221,242,963
Ensembl chr 1:221,131,813...221,242,963 		JBrowse link
G Cimip2b ciliary microtubule inner protein 2B located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 5:57,675,537...57,680,133
Ensembl chr 5:57,675,462...57,678,611 		JBrowse link
G Cimip2c ciliary microtubule inner protein 2C located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 6:25,905,294...25,923,615
Ensembl chr 6:25,905,294...25,923,615 		JBrowse link
G Efhb EF hand domain family, member B located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 9:6,372,191...6,441,678
Ensembl chr 9:6,372,194...6,441,919 		JBrowse link
G Efhc1 EF-hand domain containing 1 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283 		JBrowse link
G Efhc2 EF-hand domain containing 2 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr  X:5,360,499...5,564,004
Ensembl chr  X:5,360,617...5,560,970 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr17:83,690,105...83,714,756
Ensembl chr17:83,690,797...83,714,408 		JBrowse link
G Ift70a1 intraflagellar transport 70A1 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:60,901,896...60,905,350
Ensembl chr 3:60,901,896...60,905,350 		JBrowse link
G Ift70a2 intraflagellar transport 70A2 located_in
is_active_in		 IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:60,899,193...60,901,634
Ensembl chr 3:60,899,196...60,901,634 		JBrowse link
G Ift70b intraflagellar transport 70B located_in
is_active_in		 IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:60,855,809...60,858,380
Ensembl chr 3:60,855,575...60,858,389 		JBrowse link
G Mns1 meiosis-specific nuclear structural 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:36191189)		 UniProt
RGD		 PMID:36191189 GO_REF:0000024 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925 		JBrowse link
G Nme7 NME/NM23 family member 7 located_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:7495398|PMID:37295417)
(PMID:36191189), (PMID:37258679)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:36191189 PMID:37258679 PMID:37295417 GO_REF:0000024 GO_REF:0000107 MGI:7495398 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Pacrg parkin coregulated located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 1:49,882,671...50,305,564
Ensembl chr 1:49,882,630...50,305,430 		JBrowse link
G Pierce1 piercer of microtubule wall 1 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
G Pierce2 piercer of microtubule wall 2 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 8:73,715,383...73,719,849
Ensembl chr 8:73,715,383...73,719,849 		JBrowse link
G Ribc2 RIB43A domain with coiled-coils 2 located_in ISS
ISO		 GO_REF:0000024
(PMID:36191189)		 UniProt
RGD		 PMID:36191189 GO_REF:0000024 NCBI chr 7:116,242,863...116,257,868
Ensembl chr 7:116,242,863...116,257,863 		JBrowse link
G Rpgrip1l Rpgrip1-like IDA RGD PMID:17558407 RGD:11537356 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 located_in
is_active_in		 ISO
IBA		 (PMID:25673876)
GO_REF:0000033		 RGD
GO_Central		 PMID:25673876 GO_REF:0000033 NCBI chr 5:100,937,134...101,093,308
Ensembl chr 5:100,937,130...101,093,281 		JBrowse link
G Saxo2 stabilizer of axonemal microtubules 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:136,596,445...136,638,444
Ensembl chr 1:136,623,493...136,638,454 		JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 located_in
is_active_in		 ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:27,973,442...27,975,599 JBrowse link
G Spaca9 sperm acrosome associated 9 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:36191189)		 UniProt
Ensembl
RGD		 PMID:36191189 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:12,019,376...12,028,801
Ensembl chr 3:12,019,363...12,029,119 		JBrowse link
G Spag8 sperm associated antigen 8 located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 5:57,901,681...57,903,894
Ensembl chr 5:57,901,682...57,903,894 		JBrowse link
G Tekt1 tektin 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:36191189)		 UniProt
RGD		 PMID:36191189 GO_REF:0000024 NCBI chr10:56,952,164...56,980,572
Ensembl chr10:56,952,167...56,980,572 		JBrowse link
G Tekt2 tektin 2 located_in ISS
ISO		 GO_REF:0000024
(PMID:36191189)		 UniProt
RGD		 PMID:36191189 GO_REF:0000024 NCBI chr 5:138,619,665...138,623,301
Ensembl chr 5:138,619,667...138,623,204 		JBrowse link
G Tekt3 tektin 3 located_in ISS
ISO		 GO_REF:0000024
(PMID:36191189)		 UniProt
RGD		 PMID:36191189 GO_REF:0000024 NCBI chr10:47,729,635...47,763,589
Ensembl chr10:47,729,635...47,763,588 		JBrowse link
G Tekt4 tektin 4 located_in ISS
ISO		 GO_REF:0000024
(PMID:36191189)		 UniProt
RGD		 PMID:36191189 GO_REF:0000024 NCBI chr10:14,487,760...14,492,936
Ensembl chr10:14,487,760...14,492,936 		JBrowse link
G Tuba1a tubulin, alpha 1A located_in ISO (PMID:36191189) RGD PMID:36191189 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Tubb4b tubulin, beta 4B class IVb located_in IEA
ISO		 GO_REF:0000107
(PMID:36191189)		 Ensembl
RGD		 PMID:36191189 GO_REF:0000107 NCBI chr 3:8,037,838...8,040,294
Ensembl chr 3:8,037,799...8,040,296 		JBrowse link
cortical microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO (PMID:26765568) RGD PMID:26765568 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855 		JBrowse link
cortical microtubule plus-end term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp2 cytoplasmic linker associated protein 2 located_in ISO (PMID:24520051) RGD PMID:24520051 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731 		JBrowse link
G Pde4dip phosphodiesterase 4D interacting protein located_in ISO (PMID:29162697) RGD PMID:29162697 NCBI chr 2:185,293,236...185,490,100
Ensembl chr 2:185,293,214...185,468,379 		JBrowse link
mitotic spindle astral microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccsap centriole, cilia and spindle-associated protein located_in ISO (PMID:26562023) RGD PMID:26562023 NCBI chr19:51,824,954...51,843,469
Ensembl chr19:51,826,994...51,842,753 		JBrowse link
G Dynlt3 dynein light chain Tctex-type 3 IDA RGD PMID:17289665 RGD:8554144 NCBI chr  X:13,327,933...13,337,139
Ensembl chr  X:13,327,892...13,337,139 		JBrowse link
G Kif18a kinesin family member 18A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:95,764,388...95,824,756
Ensembl chr 3:95,764,388...95,824,582 		JBrowse link
G Kif18b kinesin family member 18B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:87,870,424...87,889,895
Ensembl chr10:87,870,428...87,889,850 		JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO (PMID:10811826), (PMID:12445386), (PMID:1541636), (PMID:24996901), (PMID:26562023) RGD PMID:1541636 PMID:10811826 PMID:12445386 PMID:24996901 PMID:26562023 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855 		JBrowse link
mitotic spindle astral microtubule end term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapre1 microtubule-associated protein, RP/EB family, member 1 located_in ISO
IEA		 (PMID:23509069)
GO_REF:0000107		 RGD
Ensembl		 PMID:23509069 GO_REF:0000107 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983 		JBrowse link
G Mapre3 microtubule-associated protein, RP/EB family, member 3 located_in ISO (PMID:23509069) RGD PMID:23509069 NCBI chr 6:25,513,800...25,558,876
Ensembl chr 6:25,513,800...25,558,881 		JBrowse link
G Misp mitotic spindle positioning located_in ISO (PMID:23509069) RGD PMID:23509069 NCBI chr 7:9,870,390...9,886,541
Ensembl chr 7:9,870,444...9,886,541 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21254
    cellular anatomical entity 21098
      cytoplasm 12262
        cytoplasmic microtubule 128
          astral microtubule + 11
          axonemal microtubule + 59
          cortical microtubule + 3
          cytoplasmic microtubule minus-end 0
          cytoplasmic microtubule plus-end + 2
Path 2
Term Annotations click to browse term
  cellular_component 21254
    cellular anatomical entity 21098
      organelle 14217
        intracellular organelle 13782
          intracellular non-membrane-bounded organelle 5312
            cytoskeleton 2390
              microtubule cytoskeleton 1422
                microtubule 472
                  cytoplasmic microtubule 128
                    astral microtubule + 11
                    axonemal microtubule + 59
                    cortical microtubule + 3
                    cytoplasmic microtubule minus-end 0
                    cytoplasmic microtubule plus-end + 2
paths to the root