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ONTOLOGY REPORT - ANNOTATIONS


Term:spindle microtubule
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Accession:GO:0005876 term browser browse the term
Definition:Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole.



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spindle microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL3 ADP ribosylation factor like GTPase 3 located_in ISS UniProt GO_REF:0000024 NCBI chr14:113,668,375...113,699,583
Ensembl chr14:113,665,270...113,707,591
JBrowse link
G AURKA aurora kinase A located_in
is_active_in
IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr17:56,954,838...56,972,435 JBrowse link
G AURKB aurora kinase B located_in
is_active_in
IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr12:53,410,833...53,426,165
Ensembl chr12:53,410,177...53,423,225
JBrowse link
G AURKC aurora kinase C is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:61,584,575...61,588,402 JBrowse link
G AURKC aurora kinase C is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:61,652,298...61,656,126
Ensembl chr 6:61,650,649...61,656,113
JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 located_in ISS UniProt GO_REF:0000024 NCBI chr12:3,747,276...3,755,214
Ensembl chr12:3,747,279...3,755,215
JBrowse link
G BOD1 biorientation of chromosomes in cell division 1 located_in ISO (PMID:17938248) UniProt PMID:17938248 NCBI chr16:50,734,510...50,743,417 JBrowse link
G CALM1 calmodulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744
JBrowse link
G CALM2 calmodulin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218
JBrowse link
G CALM3 calmodulin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G CAPN6 calpain 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:91,258,696...91,288,128
Ensembl chr  X:91,258,688...91,288,077
JBrowse link
G CCDC57 coiled-coil domain containing 57 is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:819,334...896,662
Ensembl chr12:819,886...917,477
JBrowse link
G CDK1 cyclin dependent kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:64,233,945...64,255,290
Ensembl chr14:64,233,987...64,372,197
JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,746...30,042,734
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585
JBrowse link
G CSNK1D casein kinase 1 delta located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:768,856...794,495
Ensembl chr12:768,865...796,595
JBrowse link
G DIAPH1 diaphanous related formin 1 located_in IDA (PMID:15123714) BHF-UCL PMID:15123714 NCBI chr 2:143,158,691...143,271,110
Ensembl chr 2:143,158,585...143,271,147
JBrowse link
G EML3 EMAP like 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,127,680...9,137,651
Ensembl chr 2:9,127,698...9,137,653
JBrowse link
G FAM110A family with sequence similarity 110 member A located_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,425,618...34,437,729
Ensembl chr17:34,425,617...34,437,721
JBrowse link
G FAM161A FAM161 centrosomal protein A located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:79,952,698...79,978,584
Ensembl chr 3:79,952,844...79,978,587
JBrowse link
G HAUS2 HAUS augmin like complex subunit 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,820,551...128,839,027
Ensembl chr 1:128,819,957...128,839,134
JBrowse link
G KIF11 kinesin family member 11 located_in
is_active_in
IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:104,125,839...104,177,381
Ensembl chr14:104,125,898...104,177,379
JBrowse link
G KIF20B kinesin family member 20B located_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:101,512,685...101,594,703
Ensembl chr14:101,512,814...101,594,696
JBrowse link
G KIF2A kinesin family member 2A located_in IEA Ensembl GO_REF:0000107 NCBI chr16:41,016,680...41,101,122
Ensembl chr16:41,016,674...41,102,545
JBrowse link
G KIF3A kinesin family member 3A located_in ISO (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr 2:134,932,339...135,069,408
Ensembl chr 2:134,932,615...135,069,377
JBrowse link
G KIF3C kinesin family member 3C located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:112,963,424...113,014,632
Ensembl chr 3:112,966,804...113,014,624
JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,922,032...81,105,135
Ensembl chr 4:80,921,682...81,108,360
JBrowse link
G LOC100158035 aurora kinase A-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:48,560,798...48,563,187 JBrowse link
G MTCL1 microtubule crosslinking factor 1 located_in ISO (PMID:33587225) UniProt PMID:33587225 NCBI chr 6:99,062,347...99,178,570
Ensembl chr 6:99,062,354...99,178,468
JBrowse link
G NUMA1 nuclear mitotic apparatus protein 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:6,591,943...6,662,966
Ensembl chr 9:6,591,945...6,662,085
JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 located_in ISO (PMID:10477748) UniProt PMID:10477748 NCBI chr11:359,503...432,224
Ensembl chr11:359,476...442,436
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel located_in IDA (PMID:15123714) BHF-UCL PMID:15123714 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,537,814...22,550,901
Ensembl chr 3:22,537,831...22,552,380
JBrowse link
G POLB DNA polymerase beta located_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,356,130...11,388,122
Ensembl chr17:11,356,129...11,388,821
JBrowse link
G PSRC1 proline and serine rich coiled-coil 1 located_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:110,813,306...110,819,815
Ensembl chr 4:110,813,339...110,817,108
JBrowse link
G RMDN1 regulator of microtubule dynamics 1 located_in
is_active_in
IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:50,344,886...50,386,187
Ensembl chr 4:50,344,909...50,389,085
JBrowse link
G RMDN2 regulator of microtubule dynamics 2 is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:102,210,367...102,307,355
Ensembl chr 3:102,215,140...102,424,775
JBrowse link
G RMDN3 regulator of microtubule dynamics 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:130,574,283...130,591,580
Ensembl chr 1:130,574,237...130,615,722
JBrowse link
G SKA1 spindle and kinetochore associated complex subunit 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:99,976,354...99,993,492
Ensembl chr 1:99,976,485...99,993,462
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:35,396,565...35,433,294
Ensembl chr12:35,396,567...35,433,299
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:1,302,880...1,321,132
Ensembl chr11:1,302,886...1,320,981
JBrowse link
G TTL tubulin tyrosine ligase is_active_in
located_in
IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:43,980,634...44,022,611
Ensembl chr 3:43,977,265...44,022,635
JBrowse link
G TUBG1 tubulin gamma 1 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,211,002...20,221,103 JBrowse link
G TUBG2 tubulin gamma 2 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,171,706...20,176,817 JBrowse link
G ZDHHC20 zinc finger DHHC-type palmitoyltransferase 20 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:1,326,646...1,405,867
Ensembl chr11:1,328,110...1,405,872
JBrowse link
astral microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM161A FAM161 centrosomal protein A located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:79,952,698...79,978,584
Ensembl chr 3:79,952,844...79,978,587
JBrowse link
G KIF18B kinesin family member 18B located_in IEA Ensembl GO_REF:0000107 NCBI chr12:18,426,828...18,448,214
Ensembl chr12:18,426,835...18,448,208
JBrowse link
G MAP9 microtubule associated protein 9 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:42,681,117...42,734,037
Ensembl chr 8:42,681,309...42,733,864
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834
JBrowse link
kinetochore microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBLN bublin coiled coil protein located_in ISO (PMID:33857431) UniProt PMID:33857431 NCBI chr 1:268,616,040...268,619,638 JBrowse link
G CENPE centromere protein E located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:117,888,968...117,965,325
Ensembl chr 8:117,888,970...117,965,252
JBrowse link
G CHMP1A charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:351,878...358,655
Ensembl chr 6:351,866...358,653
JBrowse link
G CHMP1B charged multivesicular body protein 1B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chr 6:97,356,924...97,359,613 JBrowse link
G CHMP2A charged multivesicular body protein 2A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,102,155...63,105,032
Ensembl chr 6:63,102,156...63,104,943
JBrowse link
G CHMP2B charged multivesicular body protein 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr13:168,534,950...168,569,574
Ensembl chr13:168,533,694...168,569,688
JBrowse link
G CHMP3 charged multivesicular body protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,248
JBrowse link
G CHMP4A charged multivesicular body protein 4A located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,089,092...75,093,796
Ensembl chr 7:75,089,423...75,097,761
JBrowse link
G CHMP4B charged multivesicular body protein 4B located_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,442...37,334,101
JBrowse link
G CHMP4C charged multivesicular body protein 4C located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:54,860,481...54,895,229
Ensembl chr 4:54,859,930...54,895,192
JBrowse link
G CHMP5 charged multivesicular body protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,212,769...33,227,237
Ensembl chr10:33,211,516...33,227,302
JBrowse link
G CHMP6 charged multivesicular body protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,691,821...1,698,347
Ensembl chr12:1,691,823...1,698,305
JBrowse link
G CHMP7 charged multivesicular body protein 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,390,066...7,403,657
Ensembl chr14:7,390,061...7,403,654
JBrowse link
G KIF18A kinesin family member 18A located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:32,244,073...32,331,392
Ensembl chr 2:32,244,137...32,335,736
JBrowse link
G KNTC1 kinetochore associated 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:30,154,918...30,241,988
Ensembl chr14:30,153,702...30,241,829
JBrowse link
G RAB11A RAB11A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:163,858,254...163,887,741
Ensembl chr 1:163,858,123...163,891,527
JBrowse link
G ZW10 zw10 kinetochore protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,358,801...41,400,254
Ensembl chr 9:41,348,896...41,400,208
JBrowse link
mitotic spindle astral microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCSAP centriole, cilia and spindle associated protein located_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,445,052...60,465,761
Ensembl chr14:60,445,574...60,464,599
JBrowse link
G DYNLT3 dynein light chain Tctex-type 3 ISO RGD PMID:17289665 RGD:8554144 NCBI chr  X:33,711,993...33,724,596
Ensembl chr  X:33,711,492...33,724,683
JBrowse link
G KIF18A kinesin family member 18A is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 2:32,244,073...32,331,392
Ensembl chr 2:32,244,137...32,335,736
JBrowse link
G KIF18B kinesin family member 18B is_active_in IBA GO_Central GO_REF:0000033 NCBI chr12:18,426,828...18,448,214
Ensembl chr12:18,426,835...18,448,208
JBrowse link
G NUMA1 nuclear mitotic apparatus protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,591,943...6,662,966
Ensembl chr 9:6,591,945...6,662,085
JBrowse link
mitotic spindle astral microtubule end term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAPRE1 microtubule associated protein RP/EB family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:36,390,698...36,426,435
Ensembl chr17:36,387,062...36,426,417
JBrowse link
G MAPRE3 microtubule associated protein RP/EB family member 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,084,467...112,136,079
Ensembl chr 3:112,084,469...112,136,061
JBrowse link
G MISP mitotic spindle positioning located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,607,185...77,619,124
Ensembl chr 2:77,602,142...77,619,087
JBrowse link
mitotic spindle microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP295 centrosomal protein 295 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,103,267...26,155,067
Ensembl chr 9:26,103,283...26,155,076
JBrowse link
G CLTC clathrin heavy chain located_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,848,894...35,926,028
Ensembl chr12:35,848,540...35,926,015
JBrowse link
G EML3 EMAP like 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,127,680...9,137,651
Ensembl chr 2:9,127,698...9,137,653
JBrowse link
G HAUS1 HAUS augmin like complex subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:95,756,297...95,774,245
Ensembl chr 1:95,756,267...95,780,758
JBrowse link
G HAUS2 HAUS augmin like complex subunit 2 located_in
is_active_in
IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:128,820,551...128,839,027
Ensembl chr 1:128,819,957...128,839,134
JBrowse link
G HAUS3 HAUS augmin like complex subunit 3 located_in ISO (PMID:30723163) UniProt PMID:30723163 NCBI chr 8:1,187,149...1,198,517
Ensembl chr 8:1,073,889...1,197,086
JBrowse link
G HAUS4 HAUS augmin like complex subunit 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:76,085,613...76,097,954
Ensembl chr 7:76,085,608...76,097,953
JBrowse link
G HAUS5 HAUS augmin like complex subunit 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:45,057,801...45,071,604
Ensembl chr 6:45,057,837...45,071,611
JBrowse link
G HAUS6 HAUS augmin like complex subunit 6 located_in
is_active_in
IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:203,720,253...203,771,222
Ensembl chr 1:203,720,264...203,771,138
JBrowse link
G HAUS7 HAUS augmin like complex subunit 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,234,735...124,258,133
Ensembl chr  X:124,234,736...124,258,098
JBrowse link
G HAUS8 HAUS augmin like complex subunit 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:60,567,575...60,593,378
Ensembl chr 2:60,567,581...60,593,375
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
JBrowse link
G MAP1S microtubule associated protein 1S located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:60,003,116...60,043,133
Ensembl chr 2:59,999,168...60,029,865
JBrowse link
G TUBG1 tubulin gamma 1 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,211,002...20,221,103 JBrowse link
polar microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUL3 cullin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,005
JBrowse link
G KLHL21 kelch like family member 21 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:67,420,618...67,434,812
Ensembl chr 6:67,420,622...67,434,812
JBrowse link
G KLHL22 kelch like family member 22 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:50,773,917...50,809,991
Ensembl chr14:50,773,964...50,809,986
JBrowse link
G TUBG1 tubulin gamma 1 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,211,002...20,221,103 JBrowse link
G TUBGCP3 tubulin gamma complex component 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,190,725...78,232,252
Ensembl chr11:78,190,729...78,232,252
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18662
    cellular anatomical entity 18440
      organelle 12405
        non-membrane-bounded organelle 4550
          intracellular non-membrane-bounded organelle 4548
            spindle 397
              spindle microtubule 85
                astral microtubule + 11
                kinetochore microtubule + 17
                mitotic spindle microtubule + 14
                polar microtubule + 5
Path 2
Term Annotations click to browse term
  cellular_component 18662
    cellular anatomical entity 18440
      organelle 12405
        non-membrane-bounded organelle 4550
          intracellular non-membrane-bounded organelle 4548
            cytoskeleton 2193
              microtubule cytoskeleton 1352
                spindle 397
                  spindle microtubule 85
                    astral microtubule + 11
                    kinetochore microtubule + 17
                    mitotic spindle microtubule + 14
                    polar microtubule + 5
paths to the root