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ONTOLOGY REPORT - ANNOTATIONS

Term:striated muscle thin filament
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Accession:GO:0005865 term browser browse the term
Definition:Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.


show annotations for term's descendants           Sort by:
striated muscle thin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle located_in
is_active_in		 ISO
ISS
IBA		 (PMID:15198992)
GO_REF:0000024
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:15198992 GO_REF:0000024 GO_REF:0000033 NCBI chr19:51,883,709...51,886,735
Ensembl chr19:51,883,715...51,886,742 		JBrowse link
G Fhod3 formin homology 2 domain containing 3 located_in IDA PMID:19706596 MGI PMID:19706596 RGD:8554207 NCBI chr18:15,993,079...16,425,796
Ensembl chr18:15,993,324...16,425,796 		JBrowse link
G Lmod1 leiomodin 1 located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:46,754,048...46,796,186
Ensembl chr13:46,754,033...46,794,900 		JBrowse link
G Lmod2 leiomodin 2 is_active_in
located_in		 IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:53,067,428...53,075,124
Ensembl chr 4:53,067,428...53,075,120 		JBrowse link
G Lmod3 leiomodin 3 located_in
is_active_in		 ISO
IBA		 (PMID:25250574)
GO_REF:0000033		 RGD
GO_Central		 PMID:25250574 GO_REF:0000033 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244 		JBrowse link
G Tmod1 tropomodulin 1 located_in
is_active_in		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
(PMID:25250574), (PMID:38168645)		 Ensembl
TreeGrafter
GO_Central
RGD		 PMID:25250574 PMID:38168645 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956 		JBrowse link
G Tmod2 tropomodulin 2 is_active_in
located_in		 IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:76,316,736...76,366,003
Ensembl chr 8:76,325,667...76,365,720 		JBrowse link
G Tmod3 tropomodulin 3 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:20368620)		 GO_Central
RGD		 PMID:20368620 GO_REF:0000033 NCBI chr 8:76,248,978...76,310,855
Ensembl chr 8:76,248,979...76,310,977 		JBrowse link
G Tmod4 tropomodulin 4 located_in
is_active_in		 ISO
IBA		 (PMID:25250574)
(PMID:20368620)
GO_REF:0000033		 RGD
GO_Central		 PMID:20368620 PMID:25250574 GO_REF:0000033 NCBI chr 2:182,695,709...182,700,540
Ensembl chr 2:182,695,709...182,700,540 		JBrowse link
G Tnnt2 troponin T2, cardiac type located_in ISS
ISO		 GO_REF:0000024
(PMID:12186860)		 UniProt
RGD		 PMID:12186860 GO_REF:0000024 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388 		JBrowse link
G Ttn titin located_in ISO (PMID:11717165) RGD PMID:11717165 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
cardiac Troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO
IBA		 (PMID:25771144)
GO_REF:0000033		 RGD
GO_Central		 PMID:25771144 GO_REF:0000033 NCBI chr16:6,400,801...6,405,634
Ensembl chr16:6,402,171...6,405,634 		JBrowse link
G Tnni3 troponin I3, cardiac type part_of ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
G Tnnt2 troponin T2, cardiac type part_of ISO
IEA		 (PMID:25771144)
GO_REF:0000107		 RGD
Ensembl		 PMID:25771144 GO_REF:0000107 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388 		JBrowse link
troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO (PMID:10850966), (PMID:12093807) RGD PMID:10850966 PMID:12093807 NCBI chr16:6,400,801...6,405,634
Ensembl chr16:6,402,171...6,405,634 		JBrowse link
G Tnnc2 troponin C2, fast skeletal type part_of ISO
IBA		 (PMID:17194691)
GO_REF:0000033		 RGD
GO_Central		 PMID:17194691 GO_REF:0000033 NCBI chr 3:153,513,272...153,516,033
Ensembl chr 3:153,513,271...153,516,029 		JBrowse link
G Tnni1 troponin I1, slow skeletal type part_of IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000002		 GO_Central
TreeGrafter
InterPro
RGD		 PMID:16192301 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118, RGD:1599030 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644 		JBrowse link
G Tnni2 troponin I2, fast skeletal type part_of IDA
IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(PMID:17194691)		 TreeGrafter
GO_Central
InterPro
Ensembl
RGD		 PMID:17194691 PMID:16192301 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:1599030 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560 		JBrowse link
G Tnni3 troponin I3, cardiac type part_of TAS
IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
(PMID:10806205), (PMID:10850966), (PMID:12093807), (PMID:7957210)		 TreeGrafter
GO_Central
InterPro
RGD		 PMID:7957210 PMID:10806205 PMID:10850966 PMID:12093807 PMID:1886137 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118, RGD:730167 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
G Tnnt1 troponin T1, slow skeletal type part_of IDA
IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
(PMID:15665378), (PMID:18032382)		 TreeGrafter
GO_Central
InterPro
RGD		 PMID:15665378 PMID:18032382 PMID:16192301 PMID:15788488 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118, RGD:1599030, RGD:1599482 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721 		JBrowse link
G Tnnt2 troponin T2, cardiac type part_of IDA
ISO
IBA
IEA		 (PMID:12832403)
GO_REF:0000033
GO_REF:0000118
(PMID:12093807), (PMID:2530435)
GO_REF:0000002
(PMID:12186860)		 RGD
GO_Central
TreeGrafter
InterPro		 PMID:2530435 PMID:12093807 PMID:12186860 PMID:12832403 PMID:12501194 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118, RGD:1580426 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388 		JBrowse link
G Tnnt3 troponin T3, fast skeletal type part_of TAS
IEA
IBA
ISO
IDA		 GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(PMID:17194691), (PMID:8987992), (PMID:9724539)		 TreeGrafter
GO_Central
InterPro
Ensembl
RGD		 PMID:8987992 PMID:9724539 PMID:17194691 PMID:11940518 PMID:16192301 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:1299083, RGD:1599030 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      sarcomere 220
        striated muscle thin filament 18
          muscle thin filament tropomyosin 0
          troponin complex + 8
Path 2
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      supramolecular complex 1433
        supramolecular polymer 1073
          supramolecular fiber 1065
            contractile muscle fiber 269
              myofibril 254
                sarcomere 220
                  striated muscle thin filament 18
                    muscle thin filament tropomyosin 0
                    troponin complex + 8
paths to the root