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ONTOLOGY REPORT - ANNOTATIONS


Term:mRNA cleavage factor complex
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Accession:GO:0005849 term browser browse the term
Definition:Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.


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mRNA cleavage factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 JBrowse link 3 72,125,269 72,137,122 RGD:1600115
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 7 60,385,688 60,417,661 RGD:1624291
G Cpsf7 cleavage and polyadenylation specific factor 7 JBrowse link 1 226,572,399 226,596,185 RGD:1600115
RGD:1624291
G Nudt21 nudix hydrolase 21 JBrowse link 19 11,451,366 11,470,637 RGD:1600115
RGD:13792537
RGD:1624291
G Pcf11 PCF11 cleavage and polyadenylation factor subunit JBrowse link 1 157,463,014 157,494,134 RGD:13792537
G Scaf8 SR-related CTD-associated factor 8 JBrowse link 1 44,017,801 44,120,619 RGD:13792537
mRNA cleavage and polyadenylation specificity factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC096468.1 RGD:13792537
G Cpsf1 cleavage and polyadenylation specific factor 1 JBrowse link 7 117,661,779 117,672,373 RGD:1624291
RGD:13792537
G Cpsf2 cleavage and polyadenylation specific factor 2 JBrowse link 6 125,870,372 125,898,039 RGD:1624291
RGD:13792537
G Cpsf3 cleavage and polyadenylation specific factor 3 JBrowse link 6 43,363,792 43,391,712 RGD:1624291
RGD:13792537
G Cpsf4 cleavage and polyadenylation specific factor 4 JBrowse link 12 11,199,893 11,215,690 RGD:1624291
RGD:13792537
RGD:1600115
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 7 60,385,688 60,417,661 RGD:1624291
G Cpsf7 cleavage and polyadenylation specific factor 7 JBrowse link 1 226,572,399 226,596,185 RGD:1624291
G Csnk1a1 casein kinase 1, alpha 1 JBrowse link 18 56,887,722 56,910,610 RGD:1624291
RGD:1600115
G Cstf2 cleavage stimulation factor subunit 2 JBrowse link X 104,882,726 104,909,746 RGD:1624291
RGD:13792537
G Cstf2t cleavage stimulation factor subunit 2, tau variant JBrowse link 1 249,574,954 249,578,520 RGD:13792537
G Fip1l1 factor interacting with PAPOLA and CPSF1 JBrowse link 14 36,150,381 36,208,395 RGD:1624291
RGD:13792537
RGD:1600115
G Nudt21 nudix hydrolase 21 JBrowse link 19 11,451,366 11,470,637 RGD:1624291
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha JBrowse link 2 196,227,669 196,270,949 RGD:1624291
G Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase JBrowse link 5 173,152,964 173,182,720 RGD:13792537
G Sympk symplekin JBrowse link 1 79,931,097 79,959,461 RGD:13792537
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific JBrowse link 1 225,151,462 225,162,445 RGD:1600115
RGD:1624291
G Wdr33 WD repeat domain 33 JBrowse link 18 24,584,832 24,689,681 RGD:13792537
G Zc3h3 zinc finger CCCH type containing 3 JBrowse link 7 116,787,762 116,872,536 RGD:1624291
mRNA cleavage stimulating factor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstf1 cleavage stimulation factor subunit 1 JBrowse link 3 170,380,413 170,392,162 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20300
    protein-containing complex 6095
      mRNA cleavage factor complex 22
        mRNA cleavage and polyadenylation specificity factor complex 18
        mRNA cleavage stimulating factor complex 1
Path 2
Term Annotations click to browse term
  cellular_component 20300
    cellular anatomical entity 19956
      organelle 12976
        intracellular organelle 12440
          intracellular membrane-bounded organelle 10250
            nucleus 6971
              nuclear lumen 4052
                nucleoplasm 3399
                  mRNA cleavage factor complex 22
                    mRNA cleavage and polyadenylation specificity factor complex 18
                    mRNA cleavage stimulating factor complex 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.