Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:proteasome core complex
go back to main search page
Accession:GO:0005839 term browser browse the term
Definition:A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
Synonyms:exact_synonym: macropain
 narrow_synonym: 20S core complex;   20S proteasome;   PA28gamma-20S proteasome
 alt_id: GO:0000503


show annotations for term's descendants           Sort by:
proteasome core complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psma1 proteasome subunit alpha 1 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 7:113,863,785...113,875,351
Ensembl chr 7:113,863,841...113,875,353 		JBrowse link
G Psma2 proteasome subunit alpha 2 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr13:14,787,827...14,800,258
Ensembl chr13:14,787,825...14,848,821 		JBrowse link
G Psma3 proteasome subunit alpha 3 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr12:71,016,082...71,042,651
Ensembl chr12:71,021,395...71,043,121 		JBrowse link
G Psma4 proteasome subunit alpha 4 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 9:54,858,074...54,865,316
Ensembl chr 9:54,858,074...54,865,314 		JBrowse link
G Psma5 proteasome subunit alpha 5 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:17540904), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:17540904 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 3:108,164,242...108,187,268
Ensembl chr 3:108,164,242...108,187,290 		JBrowse link
G Psma6 proteasome subunit alpha 6 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr12:55,431,007...55,465,244
Ensembl chr12:55,431,007...55,465,239 		JBrowse link
G Psma7 proteasome subunit alpha 7 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 2:179,678,160...179,684,257
Ensembl chr 2:179,678,167...179,684,226 		JBrowse link
G Psma8 proteasome subunit alpha 8 part_of IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr18:14,839,192...14,895,358
Ensembl chr18:14,839,208...14,895,358 		JBrowse link
G Psmb1 proteasome (prosome, macropain) subunit, beta type 1 part_of ISO
IDA
IBA		 (MGI:5442509|PMID:16857966), (PMID:17540904), (PMID:20498273) MGI
GO_Central		 PMID:16857966 PMID:17540904 PMID:20498273 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr17:15,695,983...15,718,538
Ensembl chr17:15,695,283...15,720,013 		JBrowse link
G Psmb10 proteasome (prosome, macropain) subunit, beta type 10 part_of IDA (MGI:5442509|PMID:16857966), (PMID:17540904) UniProt PMID:16857966 PMID:17540904 MGI:5442509 NCBI chr 8:106,662,360...106,665,024
Ensembl chr 8:106,662,367...106,665,076 		JBrowse link
G Psmb11 proteasome (prosome, macropain) subunit, beta type, 11 part_of IDA (PMID:17540904) MGI PMID:17540904 NCBI chr14:54,862,767...54,867,013
Ensembl chr14:54,858,890...54,867,013 		JBrowse link
G Psmb2 proteasome (prosome, macropain) subunit, beta type 2 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:17540904), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:17540904 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 4:126,571,460...126,603,503
Ensembl chr 4:126,571,423...126,603,507 		JBrowse link
G Psmb3 proteasome (prosome, macropain) subunit, beta type 3 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:10436176), (PMID:20498273) MGI
UniProt		 PMID:10436176 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr11:97,594,260...97,604,326
Ensembl chr11:97,594,225...97,604,326 		JBrowse link
G Psmb4 proteasome (prosome, macropain) subunit, beta type 4 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 3:94,791,635...94,794,269
Ensembl chr 3:94,791,404...94,794,272 		JBrowse link
G Psmb5 proteasome (prosome, macropain) subunit, beta type 5 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:15198663), (PMID:17540904), (PMID:20498273) MGI PMID:15198663 PMID:16857966 PMID:17540904 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr14:54,851,577...54,855,452
Ensembl chr14:54,851,576...54,855,479 		JBrowse link
G Psmb6 proteasome (prosome, macropain) subunit, beta type 6 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr11:70,416,116...70,418,684
Ensembl chr11:70,416,193...70,418,684 		JBrowse link
G Psmb7 proteasome (prosome, macropain) subunit, beta type 7 part_of ISO
IDA		 (MGI:5442509|PMID:16857966), (PMID:20498273) MGI
UniProt		 PMID:16857966 PMID:20498273 GO_REF:0000119 MGI:4834177 MGI:5442509 NCBI chr 2:38,478,058...38,533,964
Ensembl chr 2:38,478,048...38,534,099 		JBrowse link
G Psmb8 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) part_of IDA (MGI:5442509|PMID:16857966), (PMID:17540904) MGI PMID:16857966 PMID:17540904 MGI:5442509 NCBI chr17:34,417,169...34,420,428
Ensembl chr17:34,416,695...34,420,428 		JBrowse link
G Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) part_of IDA (MGI:5442509|PMID:16857966), (PMID:17540904) UniProt PMID:16857966 PMID:17540904 MGI:5442509 NCBI chr17:34,401,006...34,406,347
Ensembl chr17:34,400,961...34,406,738 		JBrowse link
proteasome core complex, alpha-subunit complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psma1 proteasome subunit alpha 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr 7:113,863,785...113,875,351
Ensembl chr 7:113,863,841...113,875,353 		JBrowse link
G Psma2 proteasome subunit alpha 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr13:14,787,827...14,800,258
Ensembl chr13:14,787,825...14,848,821 		JBrowse link
G Psma3 proteasome subunit alpha 3 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:71,016,082...71,042,651
Ensembl chr12:71,021,395...71,043,121 		JBrowse link
G Psma4 proteasome subunit alpha 4 part_of ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:54,858,074...54,865,316
Ensembl chr 9:54,858,074...54,865,314 		JBrowse link
G Psma5 proteasome subunit alpha 5 part_of ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:108,164,242...108,187,268
Ensembl chr 3:108,164,242...108,187,290 		JBrowse link
G Psma6 proteasome subunit alpha 6 part_of ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:55,431,007...55,465,244
Ensembl chr12:55,431,007...55,465,239 		JBrowse link
G Psma7 proteasome subunit alpha 7 part_of ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:179,678,160...179,684,257
Ensembl chr 2:179,678,167...179,684,226 		JBrowse link
G Psma8 proteasome subunit alpha 8 part_of IBA GO_Central GO_REF:0000033 NCBI chr18:14,839,192...14,895,358
Ensembl chr18:14,839,208...14,895,358 		JBrowse link
proteasome core complex, beta-subunit complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmb10 proteasome (prosome, macropain) subunit, beta type 10 part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:106,662,360...106,665,024
Ensembl chr 8:106,662,367...106,665,076 		JBrowse link
G Psmb11 proteasome (prosome, macropain) subunit, beta type, 11 part_of IBA GO_Central GO_REF:0000033 NCBI chr14:54,862,767...54,867,013
Ensembl chr14:54,858,890...54,867,013 		JBrowse link
G Psmb2 proteasome (prosome, macropain) subunit, beta type 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr 4:126,571,460...126,603,503
Ensembl chr 4:126,571,423...126,603,507 		JBrowse link
G Psmb3 proteasome (prosome, macropain) subunit, beta type 3 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:97,594,260...97,604,326
Ensembl chr11:97,594,225...97,604,326 		JBrowse link
G Psmb4 proteasome (prosome, macropain) subunit, beta type 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr 3:94,791,635...94,794,269
Ensembl chr 3:94,791,404...94,794,272 		JBrowse link
G Psmb5 proteasome (prosome, macropain) subunit, beta type 5 part_of IBA GO_Central GO_REF:0000033 NCBI chr14:54,851,577...54,855,452
Ensembl chr14:54,851,576...54,855,479 		JBrowse link
G Psmb6 proteasome (prosome, macropain) subunit, beta type 6 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:70,416,116...70,418,684
Ensembl chr11:70,416,193...70,418,684 		JBrowse link
G Psmb7 proteasome (prosome, macropain) subunit, beta type 7 part_of IBA GO_Central GO_REF:0000033 NCBI chr 2:38,478,058...38,533,964
Ensembl chr 2:38,478,048...38,534,099 		JBrowse link
G Psmb8 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) part_of IBA GO_Central GO_REF:0000033 NCBI chr17:34,417,169...34,420,428
Ensembl chr17:34,416,695...34,420,428 		JBrowse link
G Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) part_of IBA GO_Central GO_REF:0000033 NCBI chr17:34,401,006...34,406,347
Ensembl chr17:34,400,961...34,406,738 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28583
    protein-containing complex 6171
      catalytic complex 1786
        proteasome core complex 19
          cytosolic proteasome core complex + 0
          nuclear proteasome core complex + 0
          proteasome core complex, alpha-subunit complex + 8
          proteasome core complex, beta-subunit complex + 10
Path 2
Term Annotations click to browse term
  cellular_component 28583
    protein-containing complex 6171
      catalytic complex 1786
        peptidase complex 122
          endopeptidase complex 86
            proteasome complex 65
              proteasome core complex 19
                cytosolic proteasome core complex + 0
                nuclear proteasome core complex + 0
                proteasome core complex, alpha-subunit complex + 8
                proteasome core complex, beta-subunit complex + 10
paths to the root