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ONTOLOGY REPORT - ANNOTATIONS

Term:Golgi lumen
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Accession:GO:0005796 term browser browse the term
Definition:The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.

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Golgi lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc5 ATP binding cassette subfamily C member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:84,395,982...84,490,215
Ensembl chr11:84,396,033...84,490,211 		JBrowse link
G Agrp agouti related neuropeptide located_in ISO (PMID:15927146) RGD PMID:15927146 NCBI chr19:37,525,941...37,584,875
Ensembl chr19:37,526,419...37,528,011 		JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 TAS RGD PMID:9804790 RGD:724602 NCBI chr 8:27,777,024...27,804,368
Ensembl chr 8:27,777,179...27,804,515 		JBrowse link
G Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:75,880,410...75,881,346
Ensembl chr14:75,852,060...75,882,693 		JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:80,911,281...80,923,290
Ensembl chr14:80,911,270...80,924,831 		JBrowse link
G Ngf nerve growth factor located_in TAS Reactome:R-RNO-188325
Reactome:R-RNO-194339		 Reactome Reactome:R-RNO-188325 Reactome:R-RNO-194339 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453 		JBrowse link
G Rab33b RAB33B, member RAS oncogene family located_in ISO (PMID:18448665)
(MGI:5447922|PMID:18448665)		 RGD PMID:18448665 MGI:5447922 NCBI chr 2:140,541,619...140,552,220
Ensembl chr 2:140,541,619...140,552,220 		JBrowse link
G Sdf4 stromal cell derived factor 4 located_in IEA
ISO
ISS		 GO_REF:0000044
(MGI:80005|PMID:8609160)
GO_REF:0000024		 UniProt
RGD
BHF-UCL		 PMID:8609160 GO_REF:0000024 GO_REF:0000044 MGI:80005 NCBI chr 5:173,425,922...173,444,478
Ensembl chr 5:173,425,907...173,444,620 		JBrowse link
G Vtn vitronectin IDA RGD PMID:10192552 RGD:10003091 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038 		JBrowse link
G Zg16 zymogen granule protein 16 located_in ISO
ISS		 (PMID:17307141)
GO_REF:0000024		 RGD
UniProt		 PMID:17307141 GO_REF:0000024 NCBI chr 1:198,483,800...198,486,157
Ensembl chr 1:198,483,805...198,486,157 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      endomembrane system 3985
        Golgi apparatus 1421
          Golgi lumen 10
            Golgi stack lumen 0
            trans-Golgi network transport vesicle lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      intracellular anatomical structure 14390
        intracellular organelle 12739
          intracellular membrane-bounded organelle 11187
            Golgi apparatus 1421
              Golgi lumen 10
                Golgi stack lumen 0
                trans-Golgi network transport vesicle lumen 0
paths to the root