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ONTOLOGY REPORT - ANNOTATIONS


Term:Golgi lumen
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Accession:GO:0005796 term browser browse the term
Definition:The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.



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Golgi lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc5 ATP binding cassette subfamily C member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:80,473,809...80,567,257
Ensembl chr11:80,473,872...80,567,253
JBrowse link
G Agrp agouti related neuropeptide located_in ISO (PMID:15927146) RGD PMID:15927146 NCBI chr19:33,447,992...33,523,068
Ensembl chr19:33,447,992...33,449,584
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 TAS RGD PMID:9804790 RGD:724602 NCBI chr 8:25,087,123...25,114,692
Ensembl chr 8:25,087,547...25,113,395
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha located_in ISS
ISO
GO_REF:0000024
(PMID:29858230)
UniProt
RGD
PMID:29858230 GO_REF:0000024 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
JBrowse link
G Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:71,185,826...71,223,263
Ensembl chr14:71,185,682...71,223,248
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:75,651,371...75,663,380
Ensembl chr14:75,651,376...75,665,414
JBrowse link
G Ngf nerve growth factor located_in TAS Reactome:R-RNO-188325
Reactome:R-RNO-194339
Reactome Reactome:R-RNO-188325 Reactome:R-RNO-194339 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Rab33b RAB33B, member RAS oncogene family located_in ISO (PMID:18448665)
(MGI:5447922|PMID:18448665)
RGD PMID:18448665 MGI:5447922 NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719
JBrowse link
G Sdf4 stromal cell derived factor 4 located_in IEA
ISO
ISS
GO_REF:0000044
(MGI:80005|PMID:8609160)
GO_REF:0000024
UniProt
RGD
BHF-UCL
PMID:8609160 GO_REF:0000024 GO_REF:0000044 MGI:80005 NCBI chr 5:166,586,581...166,606,661
Ensembl chr 5:166,586,390...166,604,521
JBrowse link
G Vtn vitronectin IDA RGD PMID:10192552 RGD:10003091 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
G Zg16 zymogen granule protein 16 located_in ISO
ISS
(PMID:17307141)
GO_REF:0000024
RGD
UniProt
PMID:17307141 GO_REF:0000024 NCBI chr 1:181,657,722...181,660,079
Ensembl chr 1:181,657,722...181,660,079
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19187
    cellular anatomical entity 18928
      endomembrane system 4042
        Golgi apparatus 1449
          Golgi lumen 11
            Golgi stack lumen 0
            trans-Golgi network transport vesicle lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 19187
    cellular anatomical entity 18928
      intracellular anatomical structure 14074
        intracellular organelle 12461
          intracellular membrane-bounded organelle 11099
            Golgi apparatus 1449
              Golgi lumen 11
                Golgi stack lumen 0
                trans-Golgi network transport vesicle lumen 0
paths to the root