ONTOLOGY REPORT - ANNOTATIONS
Term: smooth endoplasmic reticulum
Accession: GO:0005790
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Definition: The smooth endoplasmic reticulum (smooth ER or SER) has no ribosomes attached to it. The smooth ER is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER.
Synonyms: exact_synonym: SER; smooth ER
xref: NIF_Subcellular:sao710427438; Wikipedia:Endoplasmic_reticulum#Smooth_endoplasmic_reticulum
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App
amyloid beta precursor protein
located_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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Calr
calreticulin
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
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Canx
calnexin
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr10:34,623,865...34,656,866
Ensembl chr10:34,625,191...34,656,821
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Dnajc3
DnaJ heat shock protein family (Hsp40) member C3
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr15:96,025,729...96,065,114
Ensembl chr15:96,025,624...96,065,181
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Erp29
endoplasmic reticulum protein 29
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr12:35,089,698...35,095,952
Ensembl chr12:35,089,707...35,096,376
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Fmr1
fragile X messenger ribonucleoprotein 1
IDA
RGD
PMID:12112448
RGD:11566026
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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Gabarap
GABA type A receptor-associated protein
located_in
ISO
(MGI:1929594|PMID:11146101)
RGD
PMID:11146101
MGI:1929594
NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
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Hsp90b1
heat shock protein 90 beta family member 1
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788
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Hspa5
heat shock protein family A (Hsp70) member 5
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
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Hyou1
hypoxia up-regulated 1
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 8:44,706,073...44,718,189
Ensembl chr 8:44,706,263...44,718,186
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Jph4
junctophilin 4
located_in
ISO
(MGI:3714568|PMID:17347645)
RGD
PMID:17347645
MGI:3714568
NCBI chr15:28,579,579...28,588,903
Ensembl chr15:28,571,568...28,587,573
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Kcnj2
potassium inwardly-rectifying channel, subfamily J, member 2
IDA
RGD
PMID:18076085
RGD:7247433
NCBI chr10:96,060,849...96,071,401
Ensembl chr10:96,060,821...96,071,445
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Kcnn2
potassium calcium-activated channel subfamily N member 2
located_in
ISO
(MGI:3714568|PMID:17347645)
RGD
PMID:17347645
MGI:3714568
NCBI chr18:37,817,966...38,258,347
Ensembl chr18:37,817,957...38,258,347
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Map2
microtubule-associated protein 2
IDA
RGD
PMID:15623521
RGD:1625439
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
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Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
located_in
ISO
(MGI:3629289|PMID:16606357)
RGD
PMID:16606357
MGI:3629289
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
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Myo1d
myosin ID
IDA
RGD
PMID:15809075
RGD:2314421
NCBI chr10:65,489,153...65,765,812
Ensembl chr10:65,489,154...65,766,349
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Myo5a
myosin VA
is_active_in
ISO
(MGI:4939562|PMID:21151132)
RGD
PMID:21151132
MGI:4939562
NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
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Pdia3
protein disulfide isomerase family A, member 3
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236
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Pdia4
protein disulfide isomerase family A, member 4
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 4:76,803,198...76,822,245
Ensembl chr 4:76,803,198...76,822,107
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Pdia6
protein disulfide isomerase family A, member 6
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 6:40,062,980...40,080,223
Ensembl chr 6:40,062,926...40,080,613
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Plcb4
phospholipase C, beta 4
located_in is_active_in
IEA ISO
GO_REF:0000107 (MGI:3603702|PMID:15579147)
Ensembl RGD
PMID:15579147
GO_REF:0000107 MGI:3603702
NCBI chr 3:122,952,965...123,322,522
Ensembl chr 3:122,953,196...123,322,392
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Ppib
peptidylprolyl isomerase B
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr 8:66,603,877...66,609,734
Ensembl chr 8:66,603,861...66,630,428
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Prdx4
peroxiredoxin 4
located_in
IDA
PMID:22665516
UniProt
PMID:22665516
RGD:8553430
NCBI chr X:40,026,762...40,044,066
Ensembl chr X:40,026,651...40,044,066
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Psen1
presenilin 1
colocalizes_with located_in
ISO
(PMID:10508860) (PMID:9632714)
RGD
PMID:9632714 PMID:10508860
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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Rpl10
ribosomal protein L10
colocalizes_with
ISO
(PMID:10508860) (MGI:6316562|PMID:10508860)
RGD
PMID:10508860
MGI:6316562
NCBI chr X:152,054,547...152,056,757
Ensembl chr X:152,054,452...152,056,761
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Rtn1
reticulon 1
located_in
IDA
PMID:23454728
MGI
PMID:23454728
RGD:8693349
NCBI chr 6:90,763,212...90,983,436
Ensembl chr 6:90,763,216...90,983,436
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Ryr1
ryanodine receptor 1
located_in is_active_in
ISO IBA
(MGI:5519014|PMID:23454728) PMID:21873635
RGD
PMID:23454728 PMID:21873635
MGI:5519014 , RGD:13792537
NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
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Ryr2
ryanodine receptor 2
located_in is_active_in
IEA IBA ISO
GO_REF:0000107 PMID:21873635 (MGI:5519014|PMID:23454728)
Ensembl RGD
PMID:23454728 PMID:21873635
GO_REF:0000107 MGI:5519014 , RGD:13792537
NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
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Ryr3
ryanodine receptor 3
is_active_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:99,431,755...99,979,125
Ensembl chr 3:99,432,505...99,704,961
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Sri
sorcin
IDA
RGD
PMID:9378856
RGD:7327212
NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077
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Syvn1
synoviolin 1
located_in
ISO
(PMID:16186510)
RGD
PMID:16186510
NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152
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Th
tyrosine hydroxylase
located_in
ISO
(PMID:12457228)
RGD
PMID:12457228
NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
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Aldob
aldolase, fructose-bisphosphate B
IDA
RGD
PMID:234468
RGD:2313431
NCBI chr 5:63,889,045...63,902,086
Ensembl chr 5:63,889,046...63,902,116
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Ftcd
formimidoyltransferase cyclodeaminase
located_in
ISO
(PMID:14697341)
RGD
PMID:14697341
NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735
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Itpr1
inositol 1,4,5-trisphosphate receptor, type 1
is_active_in
IDA
PMID:1311032
SynGO
PMID:1311032
RGD:13702190
NCBI chr 4:141,187,377...141,554,240
Ensembl chr 4:141,187,418...141,510,491
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Pgrmc1
progesterone receptor membrane component 1
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr X:115,832,865...115,841,060
Ensembl chr X:115,832,884...115,888,682
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Stx17
syntaxin 17
located_in
IDA
PMID:10930465
UniProt
PMID:10930465
RGD:8553381
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
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Svip
small VCP interacting protein
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
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Ttyh1
tweety family member 1
located_in is_active_in
ISO IBA
(MGI:4461352|PMID:20568244) PMID:21873635
RGD
PMID:20568244 PMID:21873635
MGI:4461352 , RGD:13792537
NCBI chr 1:70,053,312...70,071,872
Ensembl chr 1:70,053,324...70,071,845
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