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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum lumen
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Accession:GO:0005788 term browser browse the term
Definition:The volume enclosed by the membranes of the endoplasmic reticulum.
Synonyms:exact_synonym: ER cisterna;   ER lumen;   cisternal lumen;   endoplasmic reticulum cisterna
 alt_id: GO:0016022


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endoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IDA RGD PMID:1133098 RGD:2301187 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Alg12 ALG12, alpha-1,6-mannosyltransferase located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:129,798,663...129,812,677
Ensembl chr 7:129,798,663...129,812,388
JBrowse link
G Bche butyrylcholinesterase IDA RGD PMID:1133098 RGD:2301187 NCBI chr 2:171,104,476...171,196,186
Ensembl chr 2:171,100,140...171,196,395
JBrowse link
G Calr calreticulin located_in ISO (PMID:11149926), (PMID:21590275)
(MGI:4940949|PMID:21187406)
RGD PMID:11149926 PMID:21187406 PMID:21590275 MGI:4940949 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link
G Calr3 calreticulin 3 located_in ISO (PMID:21590275) RGD PMID:21590275 NCBI chr16:19,097,391...19,124,062
Ensembl chr16:19,097,391...19,124,062
JBrowse link
G Calr4 calreticulin 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:128,865,339...128,900,135
Ensembl chr 5:128,865,389...128,899,792
JBrowse link
G Calu calumenin IDA RGD PMID:8416973 RGD:633877 NCBI chr 4:56,625,611...56,653,112
Ensembl chr 4:56,625,561...56,653,111
JBrowse link
G Cd4 Cd4 molecule located_in ISO (MGI:3611991|PMID:16223484) RGD PMID:16223484 MGI:3611991 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
G Cercam cerebral endothelial cell adhesion molecule located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:8,421,116...8,444,743
Ensembl chr 3:8,430,829...8,444,851
JBrowse link
G Ces1c carboxylesterase 1C located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:15,294,524...15,335,005
Ensembl chr19:15,081,158...15,335,002
JBrowse link
G Ces1d carboxylesterase 1D located_in NAS
ISO
ISS
IEA
(MGI:5318031|PMID:15220344)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15220344, PMID:2386485 GO_REF:0000024 GO_REF:0000107 MGI:5318031, RGD:70683 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Ces1e carboxylesterase 1E located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G Cesl1 carboxylesterase-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr19:15,081,158...15,335,002 JBrowse link
G Cln6 CLN6, transmembrane ER protein located_in ISO (PMID:15010453) RGD PMID:15010453 NCBI chr 8:67,733,215...67,748,170
Ensembl chr 8:67,733,215...67,748,172
JBrowse link
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 located_in ISO (PMID:20470363) RGD PMID:20470363 NCBI chr16:20,039,969...20,052,277
Ensembl chr16:20,039,969...20,052,276
JBrowse link
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 located_in ISO (PMID:20805301) RGD PMID:20805301 NCBI chr12:17,382,749...17,387,909
Ensembl chr12:17,383,159...17,387,879
JBrowse link
G Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:81,741,342...81,757,806
Ensembl chr11:81,741,297...81,757,813
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 located_in ISS
ISO
GO_REF:0000024
(MGI:5499714|PMID:22267725)
UniProt
RGD
PMID:22267725 GO_REF:0000024 MGI:5499714 NCBI chr 6:64,165,913...64,170,122
Ensembl chr 6:64,165,913...64,170,151
JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 located_in ISS
ISO
GO_REF:0000024
(PMID:23769672)
UniProt
RGD
PMID:23769672 GO_REF:0000024 NCBI chr 3:67,538,289...67,578,308
Ensembl chr 3:67,538,289...67,578,306
JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 located_in ISO (MGI:4418606|PMID:18923430) RGD PMID:18923430 MGI:4418606 NCBI chr15:104,186,918...104,226,236
Ensembl chr15:104,186,792...104,226,329
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 located_in ISO (MGI:3654428|PMID:16431915) RGD PMID:16431915 MGI:3654428 NCBI chr13:69,135,095...69,197,708
Ensembl chr13:69,135,128...69,199,511
JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 located_in IDA PMID:10369669 UniProt PMID:10369669 RGD:40902965 NCBI chr 6:108,087,677...108,123,811
Ensembl chr 6:108,087,418...108,120,579
JBrowse link
G Eogt EGF domain specific O-linked N-acetylglucosamine transferase part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:129,477,779...129,515,435
Ensembl chr 4:129,477,807...129,515,435
JBrowse link
G Erap1 endoplasmic reticulum aminopeptidase 1 IDA RGD PMID:12436109 RGD:1299520 NCBI chr 2:1,410,877...1,449,734
Ensembl chr 2:1,410,934...1,449,733
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 located_in ISO (PMID:16531414), (PMID:18264092) RGD PMID:16531414 PMID:18264092 NCBI chr14:115,314,890...115,352,871
Ensembl chr14:115,314,890...115,352,562
JBrowse link
G Erp29 endoplasmic reticulum protein 29 TAS RGD PMID:11884402 RGD:728752 NCBI chr12:40,619,377...40,625,884
Ensembl chr12:40,619,377...40,625,883
JBrowse link
G Erp44 endoplasmic reticulum protein 44 located_in ISO (PMID:11847130) RGD PMID:11847130 NCBI chr 5:63,937,866...64,030,827
Ensembl chr 5:63,937,784...64,030,901
JBrowse link
G Fkbp9 FKBP prolyl isomerase 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:87,167,514...87,234,198
Ensembl chr 4:87,167,514...87,234,197
JBrowse link
G Foxred2 FAD-dependent oxidoreductase domain containing 2 located_in
part_of
ISO
IBA
(PMID:19706418)
PMID:21873635
RGD PMID:19706418, PMID:21873635 RGD:13792537 NCBI chr 7:119,172,189...119,186,670
Ensembl chr 7:119,170,181...119,185,238
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 IDA RGD PMID:10402461 RGD:2316367 NCBI chr 1:265,904,616...266,033,107
Ensembl chr 1:265,904,566...266,033,156
JBrowse link
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) located_in ISO (PMID:18628520) RGD PMID:18628520 NCBI chr 5:166,994,683...167,030,441
Ensembl chr 5:166,998,881...167,030,441
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 located_in ISO (PMID:10497210) RGD PMID:10497210 NCBI chr 7:27,226,570...27,240,533
Ensembl chr 7:27,226,569...27,240,533
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 located_in
part_of
ISO
IBA
(PMID:21289099)
(MGI:4437543|PMID:19816510)
PMID:21873635
RGD PMID:19816510 PMID:21289099, PMID:21873635 MGI:4437543, RGD:13792537 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Hyou1 hypoxia up-regulated 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:48,699,796...48,711,912
Ensembl chr 8:48,699,769...48,711,910
JBrowse link
G Jmjd8 jumonji domain containing 8 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29133832)
UniProt
Ensembl
RGD
PMID:29133832 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,195,954...15,198,870
Ensembl chr10:15,195,969...15,198,868
JBrowse link
G Lyz2 lysozyme 2 IDA RGD PMID:9208328 RGD:1599861 NCBI chr 7:60,335,968...60,341,264
Ensembl chr 7:60,335,969...60,341,264
JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor located_in ISO (PMID:29497057) RGD PMID:29497057 NCBI chr 8:115,623,175...115,626,408
Ensembl chr 8:115,623,178...115,626,380
JBrowse link
G Minpp1 multiple inositol-polyphosphate phosphatase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:251,045,352...251,071,045
Ensembl chr 1:251,045,440...251,071,040
JBrowse link
G Mzb1 marginal zone B and B1 cell-specific protein located_in ISS
ISO
GO_REF:0000024
(MGI:4866969|PMID:21093319)
UniProt
RGD
PMID:21093319 GO_REF:0000024 MGI:4866969 NCBI chr18:28,436,546...28,438,607
Ensembl chr18:28,436,548...28,438,654
JBrowse link
G Ngf nerve growth factor located_in TAS Reactome:R-RNO-188325 Reactome Reactome:R-RNO-188325 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Os9 OS9, endoplasmic reticulum lectin located_in
part_of
IDA
IBA
ISO
PMID:19084021
PMID:21873635
(PMID:18264092), (PMID:18417469), (PMID:19084021)
RGD PMID:18264092 PMID:18417469 PMID:19084021, PMID:19084021, PMID:21873635 RGD:8554273, RGD:13792537 NCBI chr 7:70,378,625...70,407,135
Ensembl chr 7:70,380,311...70,407,177
JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:28,920,616...28,972,576
Ensembl chr20:28,920,616...28,971,966
JBrowse link
G P4ha2 prolyl 4-hydroxylase subunit alpha 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:39,435,227...39,464,134
Ensembl chr10:39,435,227...39,464,188
JBrowse link
G P4ha3 prolyl 4-hydroxylase subunit alpha 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:165,295,835...165,330,922
Ensembl chr 1:165,295,847...165,330,322
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:113,376,983...113,400,707
Ensembl chr 3:113,376,983...113,400,707
JBrowse link
G Pdia4 protein disulfide isomerase family A, member 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:77,470,636...77,489,535
Ensembl chr 4:77,470,636...77,489,535
JBrowse link
G Pdia5 protein disulfide isomerase family A, member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:68,493,035...68,578,999
Ensembl chr11:68,493,035...68,578,995
JBrowse link
G Pdia6 protein disulfide isomerase family A, member 6 located_in IEA
IDA
GO_REF:0000044
PMID:14561759
UniProt PMID:14561759 GO_REF:0000044, RGD:1580664 NCBI chr 6:42,568,269...42,585,654
Ensembl chr 6:42,568,220...42,585,652
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 located_in ISO
ISS
IEA
(PMID:16524674), (PMID:27807076)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16524674 PMID:27807076 GO_REF:0000024 GO_REF:0000107 NCBI chr11:64,761,493...64,788,210
Ensembl chr11:64,761,146...64,788,208
JBrowse link
G Poglut2 protein O-glucosyltransferase 2 located_in ISO (MGI:1930400|PMID:11167020) RGD PMID:11167020 MGI:1930400 NCBI chr 9:50,872,492...50,884,596
Ensembl chr 9:50,872,492...50,884,596
JBrowse link
G Poglut3 protein O-glucosyltransferase 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:57,964,988...57,982,605
Ensembl chr 8:57,964,988...57,982,600
JBrowse link
G Ppib peptidylprolyl isomerase B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
G Ptprn2 protein tyrosine phosphatase, receptor type N2 IDA RGD PMID:8663434 RGD:61724 NCBI chr 6:144,384,773...145,133,042
Ensembl chr 6:144,384,773...145,133,042
JBrowse link
G Rcn2 reticulocalbin 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:60,709,851...60,726,938
Ensembl chr 8:60,709,851...60,726,936
JBrowse link
G Rcn3 reticulocalbin 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:101,076,971...101,086,198
Ensembl chr 1:101,076,898...101,086,198
JBrowse link
G Rdh16 retinol dehydrogenase 16 located_in ISO (MGI:3611991|PMID:16223484) RGD PMID:16223484 MGI:3611991 NCBI chr 7:71,058,150...71,072,685
Ensembl chr 7:70,980,422...71,072,689
JBrowse link
G Rdh5 retinol dehydrogenase 5 located_in ISO (PMID:11675386)
(MGI:1355159|PMID:10739682), (MGI:3611991|PMID:16223484)
RGD PMID:10739682 PMID:11675386 PMID:16223484 MGI:1355159 MGI:3611991 NCBI chr 7:3,335,681...3,342,573
Ensembl chr 7:3,335,742...3,342,491
JBrowse link
G RGD1564801 similar to hepatic multiple inositol polyphosphate phosphatase located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:75,151,956...75,154,325
Ensembl chr 1:75,152,883...75,154,325
JBrowse link
G Rnaset2 ribonuclease T2 located_in ISO (PMID:16620762) RGD PMID:16620762 NCBI chr 1:53,174,879...53,192,048
Ensembl chr 1:53,174,879...53,192,048
JBrowse link
G Selenof selenoprotein F part_of
located_in
IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:11278576)
Ensembl
UniProt
RGD
PMID:11278576, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 2:250,600,823...250,633,903
Ensembl chr 2:250,600,823...250,633,897
JBrowse link
G Selenom selenoprotein M part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:83,752,393...83,754,975
Ensembl chr14:83,752,393...83,754,973
JBrowse link
G Serpinh1 serpin family H member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:164,301,010...164,308,306
Ensembl chr 1:164,301,010...164,308,317
JBrowse link
G Sil1 SIL1 nucleotide exchange factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:28,067,476...28,302,008
Ensembl chr18:28,067,484...28,301,863
JBrowse link
G Slc27a2 solute carrier family 27 member 2 part_of
located_in
IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(PMID:10198260)
Ensembl
RGD
PMID:10198260, PMID:21873635, PMID:10198260 GO_REF:0000107, RGD:13792537, RGD:8554608 NCBI chr 3:119,014,620...119,052,531
Ensembl chr 3:119,014,620...119,052,531
JBrowse link
G Sumf1 sulfatase modifying factor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:140,139,017...140,220,482
Ensembl chr 4:140,139,003...140,220,487
JBrowse link
G Sumf2 sulfatase modifying factor 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:30,465,025...30,490,683
Ensembl chr12:30,464,676...30,491,102
JBrowse link
G Tmem43 transmembrane protein 43 located_in ISO (MGI:3804743|PMID:18230648) RGD PMID:18230648 MGI:3804743 NCBI chr 4:123,118,468...123,133,610
Ensembl chr 4:123,118,468...123,133,609
JBrowse link
G Tor1a torsin family 1, member A located_in
part_of
ISS
ISO
IBA
GO_REF:0000024
(MGI:4430025|PMID:20015956)
PMID:21873635
(PMID:17037984)
(PMID:20015956)
UniProt
RGD
PMID:17037984 PMID:20015956, PMID:21873635 GO_REF:0000024 MGI:4430025, RGD:13792537 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
G Tor1b torsin family 1, member B part_of
located_in
IBA
ISO
PMID:21873635
(MGI:4430025|PMID:20015956)
(PMID:20015956)
RGD PMID:20015956, PMID:21873635 MGI:4430025, RGD:13792537 NCBI chr 3:9,792,818...9,798,924
Ensembl chr 3:9,792,899...9,798,923
JBrowse link
G Tor2a torsin family 2, member A part_of
located_in
ISO
IBA
(PMID:20015956)
(MGI:4430025|PMID:20015956)
PMID:21873635
RGD PMID:20015956, PMID:21873635 MGI:4430025, RGD:13792537 NCBI chr 3:11,794,731...11,800,261
Ensembl chr 3:11,795,629...11,799,693
JBrowse link
G Tor3a torsin family 3, member A part_of
located_in
IBA
ISO
PMID:21873635
(MGI:1343718|PMID:10208750)
(PMID:11863361)
(PMID:20015956)
RGD PMID:10208750 PMID:11863361 PMID:20015956, PMID:21873635 MGI:1343718, RGD:13792537 NCBI chr13:74,246,504...74,277,694
Ensembl chr13:74,252,405...74,276,964
JBrowse link
G Tor4a torsin family 4, member A part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,407,857...2,411,544
Ensembl chr 3:2,407,857...2,411,544
JBrowse link
G Txndc12 thioredoxin domain containing 12 part_of ISO (PMID:18628206) RGD PMID:18628206 NCBI chr 5:128,450,830...128,475,858
Ensembl chr 5:128,450,680...128,475,864
JBrowse link
G Txndc16 thioredoxin domain containing 16 located_in ISO (PMID:21359175) RGD PMID:21359175 NCBI chr15:19,472,522...19,547,384
Ensembl chr15:19,473,373...19,541,815
JBrowse link
G Txndc5 thioredoxin domain containing 5 located_in ISO (MGI:3688339|PMID:12930873) RGD PMID:12930873 MGI:3688339 NCBI chr17:26,925,828...26,953,981
Ensembl chr17:26,925,828...26,953,970
JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 located_in IDA PMID:11535823 UniProt PMID:11535823 RGD:8553934 NCBI chr 9:42,692,156...42,805,680
Ensembl chr 9:42,692,105...42,805,673
JBrowse link
perinuclear endoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin located_in ISO
ISS
IEA
(PMID:22689054)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:22689054 GO_REF:0000024 GO_REF:0000107 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
rough endoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase ISO RGD RGD:11560526 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Edn1 endothelin 1 IDA RGD PMID:10903535 RGD:8662311 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 part_of
located_in
IDA
IBA
ISO
PMID:21873635
(PMID:7774585)
RGD PMID:7774585, PMID:8223699, PMID:21873635 RGD:1641935, RGD:13792537 NCBI chr14:80,911,281...80,923,290
Ensembl chr14:80,911,270...80,924,831
JBrowse link
G Lyz2 lysozyme 2 IDA RGD PMID:9208328 RGD:1599861 NCBI chr 7:60,335,968...60,341,264
Ensembl chr 7:60,335,969...60,341,264
JBrowse link
G Resp18 regulated endocrine-specific protein 18 IDA RGD PMID:8132649 RGD:69957 NCBI chr 9:82,470,794...82,477,136
Ensembl chr 9:82,470,759...82,477,181
JBrowse link
G Vtn vitronectin IDA RGD PMID:10192552 RGD:10003091 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
sarcoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calr calreticulin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link
G Calu calumenin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:56,625,611...56,653,112
Ensembl chr 4:56,625,561...56,653,111
JBrowse link
G Casq1 calsequestrin 1 located_in
part_of
ISS
ISO
IBA
GO_REF:0000024
(MGI:3625212|PMID:16600288), (MGI:5306707|PMID:22049211)
PMID:21873635
UniProt
RGD
PMID:16600288 PMID:22049211, PMID:21873635 GO_REF:0000024 MGI:3625212 MGI:5306707, RGD:13792537 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link
G Casq2 calsequestrin 2 located_in
part_of
IEA
ISO
IBA
GO_REF:0000044
(MGI:4453101|PMID:19920148)
PMID:21873635
UniProt
RGD
PMID:19920148, PMID:21873635 GO_REF:0000044 MGI:4453101, RGD:13792537 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:27,226,570...27,240,533
Ensembl chr 7:27,226,569...27,240,533
JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:115,623,175...115,626,408
Ensembl chr 8:115,623,178...115,626,380
JBrowse link
terminal cisterna lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 IDA RGD PMID:6355123 RGD:2313258 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      endomembrane system 3985
        endoplasmic reticulum 1747
          endoplasmic reticulum lumen 85
            cortical endoplasmic reticulum lumen 0
            luminal surveillance complex 0
            mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
            perinuclear endoplasmic reticulum lumen 1
            rough endoplasmic reticulum lumen 6
            sarcoplasmic reticulum lumen + 6
            smooth endoplasmic reticulum lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      intracellular anatomical structure 14390
        intracellular organelle 12739
          intracellular membrane-bounded organelle 11187
            endoplasmic reticulum 1747
              endoplasmic reticulum lumen 85
                cortical endoplasmic reticulum lumen 0
                luminal surveillance complex 0
                mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
                perinuclear endoplasmic reticulum lumen 1
                rough endoplasmic reticulum lumen 6
                sarcoplasmic reticulum lumen + 6
                smooth endoplasmic reticulum lumen 0
paths to the root