ONTOLOGY REPORT - ANNOTATIONS |
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Term: | vacuolar lumen |
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Accession: | GO:0005775
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browse the term
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Definition: | The volume enclosed within the vacuolar membrane. |
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Cln5 |
CLN5, intracellular trafficking protein |
located_in |
ISO |
(MGI:3046133|PMID:15207259) |
RGD |
PMID:15207259 |
MGI:3046133 |
NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438
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Spata31a5 |
SPATA31 subfamily A member 5 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr17:243,648...249,434
Ensembl chr17:243,654...249,434
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Zp3r |
zona pellucida 3 receptor |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr13:42,019,998...42,064,836
Ensembl chr13:42,020,018...42,064,812
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Gaa |
alpha glucosidase |
is_active_in located_in |
ISO IEA |
MGI:2148550 (MGI:1275872|PMID:9668092) GO_REF:0000107 |
RGD Ensembl |
PMID:9668092 |
GO_REF:0000107 MGI:1275872 |
NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
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Prss57 |
serine protease 57 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:23904161) |
UniProt RGD |
PMID:23904161 |
GO_REF:0000024 |
NCBI chr 7:9,915,667...9,922,996
Ensembl chr 7:9,917,484...9,922,922
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Prtn3 |
proteinase 3 |
located_in |
ISO |
(PMID:18462208) |
RGD |
PMID:18462208 |
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NCBI chr 7:9,822,123...9,831,300
Ensembl chr 7:9,822,122...9,831,944
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Acp2 |
acid phosphatase 2, lysosomal |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 3:77,175,022...77,185,180
Ensembl chr 3:77,175,895...77,185,680
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Cubn |
cubilin |
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IDA |
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RGD |
PMID:15578272 |
RGD:2317835 |
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Epdr1 |
ependymin related 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr17:45,333,677...45,358,597
Ensembl chr17:45,333,956...45,358,594
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Faslg |
Fas ligand |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
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Gaa |
alpha glucosidase |
is_active_in |
ISO |
MGI:2148550 (MGI:1275872|PMID:9668092) |
RGD |
PMID:9668092 |
MGI:1275872 |
NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
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Gba |
glucosylceramidase beta |
located_in |
ISO |
(MGI:3773765|PMID:18022370) |
RGD |
PMID:18022370 |
MGI:3773765 |
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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Hsp90aa1 |
heat shock protein 90 alpha family class A member 1 |
located_in |
TAS |
Reactome:R-RNO-9626236 Reactome:R-RNO-9626030 Reactome:R-RNO-9622851 Reactome:R-RNO-9626275 Reactome:R-RNO-9626239 Reactome:R-RNO-9626254 Reactome:R-RNO-9625183 Reactome:R-RNO-9626028 Reactome:R-RNO-9624154 Reactome:R-RNO-9625160 Reactome:R-RNO-9625173 Reactome:R-RNO-9626250 |
Reactome |
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Reactome:R-RNO-9622851 Reactome:R-RNO-9624154 Reactome:R-RNO-9625160 Reactome:R-RNO-9625173 Reactome:R-RNO-9625183 Reactome:R-RNO-9626028 Reactome:R-RNO-9626030 Reactome:R-RNO-9626236 Reactome:R-RNO-9626239 Reactome:R-RNO-9626250 Reactome:R-RNO-9626254 Reactome:R-RNO-9626275 |
NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
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Hsp90ab1 |
heat shock protein 90 alpha family class B member 1 |
located_in |
TAS |
Reactome:R-RNO-9626236 Reactome:R-RNO-9626239 Reactome:R-RNO-9626250 Reactome:R-RNO-9626254 Reactome:R-RNO-9626030 Reactome:R-RNO-9626275 Reactome:R-RNO-9625160 Reactome:R-RNO-9625183 Reactome:R-RNO-9624154 Reactome:R-RNO-9626028 Reactome:R-RNO-9622851 Reactome:R-RNO-9625173 |
Reactome |
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Reactome:R-RNO-9622851 Reactome:R-RNO-9624154 Reactome:R-RNO-9625160 Reactome:R-RNO-9625173 Reactome:R-RNO-9625183 Reactome:R-RNO-9626028 Reactome:R-RNO-9626030 Reactome:R-RNO-9626236 Reactome:R-RNO-9626239 Reactome:R-RNO-9626250 Reactome:R-RNO-9626254 Reactome:R-RNO-9626275 |
NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
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Hspa8 |
heat shock protein family A (Hsp70) member 8 |
located_in |
TAS |
Reactome:R-RNO-9625173 Reactome:R-RNO-9626028 Reactome:R-RNO-9625160 |
Reactome |
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Reactome:R-RNO-9625160 Reactome:R-RNO-9625173 Reactome:R-RNO-9626028 |
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Neu1 |
neuraminidase 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr20:3,897,480...3,901,745
Ensembl chr20:3,897,480...3,901,745
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Nsg1 |
neuronal vesicle trafficking associated 1 |
located_in |
IDA |
PMID:28874679 |
UniProt |
PMID:28874679 |
RGD:13432228 |
NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
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Nsg2 |
neuronal vesicle trafficking associated 2 |
located_in |
IDA |
PMID:28874679 |
UniProt |
PMID:28874679 |
RGD:13432228 |
NCBI chr10:15,601,594...15,661,441
Ensembl chr10:15,601,596...15,661,441
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Pdgfrb |
platelet derived growth factor receptor beta |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
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Plbd2 |
phospholipase B domain containing 2 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr12:36,062,802...36,081,984
Ensembl chr12:36,062,802...36,081,983
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Pld3 |
phospholipase D family, member 3 |
located_in |
ISO ISS |
(PMID:30312375) GO_REF:0000024 |
RGD UniProt |
PMID:30312375 |
GO_REF:0000024 |
NCBI chr 1:82,821,863...82,844,280
Ensembl chr 1:82,821,875...82,844,072
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Rnase1 |
ribonuclease A family member 1, pancreatic |
located_in |
TAS |
Reactome:R-RNO-9625160 Reactome:R-RNO-9626028 |
Reactome |
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Reactome:R-RNO-9625160 Reactome:R-RNO-9626028 |
NCBI chr15:24,361,924...24,363,658
Ensembl chr15:24,361,927...24,363,624
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Rnaset2 |
ribonuclease T2 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 1:52,576,344...52,603,151
Ensembl chr 1:52,585,929...52,603,147
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Scarb2 |
scavenger receptor class B, member 2 |
located_in |
ISO |
(MGI:3773765|PMID:18022370) |
RGD |
PMID:18022370 |
MGI:3773765 |
NCBI chr14:15,558,271...15,609,813
Ensembl chr14:15,558,236...15,609,813
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Hspa8 |
heat shock protein family A (Hsp70) member 8 |
located_in |
IDA |
PMID:18644871 |
RGD MGI |
PMID:9038169 PMID:18644871 |
RGD:10059368, RGD:10412301 |
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Lamp2 |
lysosomal-associated membrane protein 2 |
located_in |
IDA |
PMID:18644871 |
MGI |
PMID:18644871 |
RGD:10412301 |
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
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Term paths to the root
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