ONTOLOGY REPORT - ANNOTATIONS
Term: early endosome
Accession: GO:0005769
browse the term
Definition: A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
Synonyms: xref: NIF_Subcellular:nlx_subcell_20090701
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Abcb9
ATP binding cassette subfamily B member 9
NOT|located_in
ISO
(PMID:17977821)
UniProt
PMID:17977821
NCBI chrNW_004936558:1,689,832...1,718,306
Ensembl chrNW_004936558:1,689,388...1,718,869
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Ackr1
atypical chemokine receptor 1 (Duffy blood group)
located_in
IEA
UniProt
GO_REF:0000044 GO_REF:0000104
NCBI chrNW_004936740:1,295,299...1,298,441
Ensembl chrNW_004936740:1,295,319...1,296,812
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Ackr2
atypical chemokine receptor 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936695:2,272,978...2,274,982
Ensembl chrNW_004936695:2,273,797...2,274,951
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Adrb1
adrenoceptor beta 1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936486:4,400,467...4,401,588
Ensembl chrNW_004936486:4,399,915...4,403,149
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Adrb2
adrenoceptor beta 2
located_in
IEA
UniProt
GO_REF:0000044 GO_REF:0000104
NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210
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Als2
alsin Rho guanine nucleotide exchange factor ALS2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936726:940,696...1,015,771
Ensembl chrNW_004936726:939,341...1,015,799
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Angptl3
angiopoietin like 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936692:286,432...295,021
Ensembl chrNW_004936692:286,717...294,822
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Ankfy1
ankyrin repeat and FYVE domain containing 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936677:746,408...836,495
Ensembl chrNW_004936677:749,379...836,480
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Ankrd13b
ankyrin repeat domain 13B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936538:5,700,063...5,724,335
Ensembl chrNW_004936538:5,705,026...5,724,335
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Ankrd27
ankyrin repeat domain 27
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936570:3,044,565...3,097,692
Ensembl chrNW_004936570:3,044,565...3,098,097
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Anxa1
annexin A1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413
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Anxa2
annexin A2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:21,274,112...21,329,286
Ensembl chrNW_004936471:21,274,027...21,329,503
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Ap4m1
adaptor related protein complex 4 subunit mu 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936543:246,335...250,278
Ensembl chrNW_004936543:246,335...254,975
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Apbb2
amyloid beta precursor protein binding family B member 2
located_in
ISO
(PMID:14527950)
UniProt
PMID:14527950
NCBI chrNW_004936482:8,166,380...8,489,489
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Aph1a
aph-1 homolog A, gamma-secretase subunit
ISO
RGD
PMID:20126630
RGD:13702254
NCBI chrNW_004936580:552,362...556,027
Ensembl chrNW_004936580:552,362...556,027
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Apoa5
apolipoprotein A5
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936542:2,069,683...2,071,344
Ensembl chrNW_004936542:2,069,683...2,071,353
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Apoe
apolipoprotein E
located_in
ISO
RGD
PMID:19809892
RGD:2317724
NCBI chrNW_004936706:1,512,438...1,516,805
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App
amyloid beta precursor protein
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286
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Appl1
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923
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Aqp2
aquaporin 2
ISO
RGD
PMID:18843259
RGD:2313123
NCBI chrNW_004936512:7,628,677...7,633,344
Ensembl chrNW_004936512:7,628,495...7,634,107
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Arap1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936498:1,953,770...2,016,875
Ensembl chrNW_004936498:1,953,762...2,003,367
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Arf6
ARF GTPase 6
ISO
RGD
PMID:18353411
RGD:2306454
NCBI chrNW_004936583:181,490...185,466
Ensembl chrNW_004936583:181,490...185,471
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Arrdc3
arrestin domain containing 3
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936469:9,364,291...9,377,504
Ensembl chrNW_004936469:9,364,347...9,377,501
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Asah1
N-acylsphingosine amidohydrolase 1
NOT|located_in
ISO
(PMID:12764132)
UniProt
PMID:12764132
NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512
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Atp6v0d1
ATPase H+ transporting V0 subunit d1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936475:17,888,788...17,927,513
Ensembl chrNW_004936475:17,886,371...17,927,557
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Atp6v0d2
ATPase H+ transporting V0 subunit d2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936544:774,154...819,189
Ensembl chrNW_004936544:774,125...819,244
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Atp9a
ATPase phospholipid transporting 9A (putative)
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936514:3,341,207...3,428,948
Ensembl chrNW_004936514:3,341,426...3,424,637
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Bace1
beta-secretase 1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936542:2,514,297...2,539,088
Ensembl chrNW_004936542:2,514,300...2,539,135
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Bloc1s1
biogenesis of lysosomal organelles complex 1 subunit 1
located_in part_of
ISO IEA
(PMID:16837549)
CACAO Ensembl
PMID:16837549
GO_REF:0000107
NCBI chrNW_004936646:186,422...190,870
Ensembl chrNW_004936646:186,031...190,915
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Bltp3b
bridge-like lipid transfer protein family member 3B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936492:13,622,582...13,703,033
Ensembl chrNW_004936492:13,622,598...13,703,033
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Cacng7
calcium voltage-gated channel auxiliary subunit gamma 7
ISO
RGD
PMID:21610096
RGD:13524563
NCBI chrNW_004936994:107,973...126,317
Ensembl chrNW_004936994:108,213...126,435
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Cd22
CD22 molecule
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936570:960,592...971,688
Ensembl chrNW_004936570:960,746...969,049
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Cftr
CF transmembrane conductance regulator
located_in
ISO
(PMID:19398555)
UniProt RGD
PMID:7521124 PMID:19398555
RGD:11567228
NCBI chrNW_004936589:1,565,933...1,719,208
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Chmp1a
charged multivesicular body protein 1A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936641:366,563...376,303
Ensembl chrNW_004936641:366,569...376,337
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Chmp3
charged multivesicular body protein 3
ISO
RGD
PMID:18076377
RGD:4892661
NCBI chrNW_004936712:1,023,994...1,044,727
Ensembl chrNW_004936712:1,023,989...1,044,728
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Clcn3
chloride voltage-gated channel 3
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936516:1,678,610...1,760,099
Ensembl chrNW_004936516:1,678,653...1,760,294
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Clcn4
chloride voltage-gated channel 4
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936470:142,862...214,993
Ensembl chrNW_004936470:142,832...212,154
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Clcn5
chloride voltage-gated channel 5
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936721:1,552,312...1,602,360
Ensembl chrNW_004936721:1,445,779...1,596,814
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Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436
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Cln6
CLN6 transmembrane ER protein
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:28,069,058...28,084,607
Ensembl chrNW_004936471:28,070,462...28,084,648
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Cltcl1
clathrin heavy chain like 1
NOT|located_in
ISO
(PMID:20065094)
UniProt
PMID:20065094
NCBI chrNW_004936619:3,181,890...3,276,305
Ensembl chrNW_004936619:3,181,516...3,276,328
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Cntnap2
contactin associated protein 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995
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Commd1
copper metabolism domain containing 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936491:7,247,160...7,421,039
Ensembl chrNW_004936491:7,247,140...7,420,921
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Coro1a
coronin 1A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936501:12,338,542...12,344,236
Ensembl chrNW_004936501:12,338,542...12,344,265
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Cryzl1
crystallin zeta like 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936500:8,678,212...8,711,687
Ensembl chrNW_004936500:8,678,850...8,711,645
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Ctns
cystinosin, lysosomal cystine transporter
NOT|located_in
ISO
(PMID:11150305)
UniProt
PMID:11150305
NCBI chrNW_004936677:342,964...360,890
Ensembl chrNW_004936677:343,042...360,879
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Cxcr4
C-X-C motif chemokine receptor 4
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459
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Dbnl
drebrin like
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936478:19,007,630...19,021,068
Ensembl chrNW_004936478:19,007,672...19,020,361
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Derl1
derlin 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936470:24,262,401...24,286,713
Ensembl chrNW_004936470:24,262,091...24,286,577
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Derl2
derlin 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936677:2,328,783...2,342,068
Ensembl chrNW_004936677:2,328,904...2,342,080
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Dner
delta/notch like EGF repeat containing
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936525:6,734,924...7,037,947
Ensembl chrNW_004936525:6,735,049...7,037,042
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Dtx3l
deltex E3 ubiquitin ligase 3L
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936536:8,844,778...8,853,442
Ensembl chrNW_004936536:8,844,575...8,851,146
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Dysf
dysferlin
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519
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Ece1
endothelin converting enzyme 1
located_in
ISO
(PMID:18039931)
BHF-UCL RGD
PMID:18039931 PMID:22881710
RGD:7243859
NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005
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Ecpas
Ecm29 proteasome adaptor and scaffold
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936559:1,807,768...1,918,529
Ensembl chrNW_004936559:1,807,753...1,921,423
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Eea1
early endosome antigen 1
located_in part_of
IEA ISO
(PMID:16543144)
Ensembl TreeGrafter CACAO
PMID:16543144
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936507:9,331,572...9,465,708
Ensembl chrNW_004936507:9,331,455...9,424,835
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Ehd1
EH domain containing 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:4,451,207...4,473,078
Ensembl chrNW_004936599:4,450,188...4,473,738
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Ehd2
EH domain containing 2
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936664:1,316,621...1,331,678
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Entr1
endosome associated trafficking regulator 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936669:1,396,733...1,403,927
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Epha3
EPH receptor A3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936610:462,842...799,466
Ensembl chrNW_004936610:462,853...799,364
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Epha4
EPH receptor A4
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348
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Eps15
epidermal growth factor receptor pathway substrate 15
ISO
RGD
PMID:21832070
RGD:9685531
NCBI chrNW_004936522:9,438,929...9,486,781
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Erbb2
erb-b2 receptor tyrosine kinase 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956
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F2r
coagulation factor II thrombin receptor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936549:226,508...247,024
Ensembl chrNW_004936549:225,371...247,042
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F2rl1
F2R like trypsin receptor 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602
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F8a1
coagulation factor VIII associated 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936927:234,162...236,881
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Ferry3
FERRY endosomal RAB5 effector complex subunit 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936606:4,660,203...4,697,065
Ensembl chrNW_004936606:4,659,340...4,697,060
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Fgd2
FYVE, RhoGEF and PH domain containing 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936476:22,423,851...22,442,795
Ensembl chrNW_004936476:22,424,042...22,442,689
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Flot1
flotillin 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071
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Fzd5
frizzled class receptor 5
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560
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Gatd1
glutamine amidotransferase class 1 domain containing 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936888:542,472...547,296
Ensembl chrNW_004936888:543,105...547,296
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Gga1
golgi associated, gamma adaptin ear containing, ARF binding protein 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936492:3,445,271...3,464,960
Ensembl chrNW_004936492:3,445,094...3,464,809
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Gga3
golgi associated, gamma adaptin ear containing, ARF binding protein 3
located_in
ISO
PMID:26446845
UniProt
PMID:26446845
RGD:11554955
NCBI chrNW_004936594:531,844...548,487
Ensembl chrNW_004936594:532,342...548,440
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Gja1
gap junction protein alpha 1
ISO
RGD
PMID:16162097
RGD:1582681
NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987
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Gper1
G protein-coupled estrogen receptor 1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427
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Gpr107
G protein-coupled receptor 107
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936487:17,192,159...17,272,782
Ensembl chrNW_004936487:17,192,155...17,273,166
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Gria1
glutamate ionotropic receptor AMPA type subunit 1
located_in
ISO
PMID:11100149
UniProt
PMID:11100149
RGD:8554168
NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151
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Havcr2
hepatitis A virus cellular receptor 2
located_in
ISO
(PMID:22842346)
UniProt
PMID:22842346
NCBI chrNW_004936515:6,001,324...6,015,407
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Hfe
homeostatic iron regulator
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580
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Hgs
hepatocyte growth factor-regulated tyrosine kinase substrate
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936594:5,285,678...5,301,267
Ensembl chrNW_004936594:5,285,551...5,301,233
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Hmgb1
high mobility group box 1
located_in
ISO
(PMID:19890330)
UniProt
PMID:19890330
NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
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Hspd1
heat shock protein family D (Hsp60) member 1
located_in
ISO
(PMID:11807771)
BHF-UCL
PMID:11807771
NCBI chrNW_004936506:1,678,069...1,687,632
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Hyal3
hyaluronidase 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936529:1,831,639...1,837,314
Ensembl chrNW_004936529:1,831,254...1,837,314
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Igf2r
insulin like growth factor 2 receptor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936489:11,447,043...11,523,695
Ensembl chrNW_004936489:11,447,038...11,524,174
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Inpp5f
inositol polyphosphate-5-phosphatase F
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936486:9,123,176...9,166,715
Ensembl chrNW_004936486:9,123,119...9,188,117
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Itch
itchy E3 ubiquitin protein ligase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767
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Kcnq1
potassium voltage-gated channel subfamily Q member 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936794:707,122...994,206
Ensembl chrNW_004936794:707,119...994,778
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Kdr
kinase insert domain receptor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
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Kiaa0319
KIAA0319 ortholog
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936671:870,107...912,727
Ensembl chrNW_004936671:870,695...912,727
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Kif16b
kinesin family member 16B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936485:3,443,878...3,728,613
Ensembl chrNW_004936485:3,443,878...3,726,174
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Lamp3
lysosomal associated membrane protein 3
located_in
ISO
(PMID:21810281)
ParkinsonsUK-UCL
PMID:21810281
NCBI chrNW_004936566:365,326...394,985
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Laptm4b
lysosomal protein transmembrane 4 beta
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936470:44,917,462...44,981,773
Ensembl chrNW_004936470:44,914,011...44,982,065
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Ldlr
low density lipoprotein receptor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294
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Ldlrap1
low density lipoprotein receptor adaptor protein 1
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777
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Lipc
lipase C, hepatic type
ISO
RGD
PMID:14701798
RGD:1625029
NCBI chrNW_004936471:19,604,083...19,733,721
Ensembl chrNW_004936471:19,703,236...19,733,686
G
Lipg
lipase G, endothelial type
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936497:13,406,402...13,429,833
Ensembl chrNW_004936497:13,406,357...13,429,890
G
Lmtk2
lemur tyrosine kinase 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936750:665,410...751,529
Ensembl chrNW_004936750:686,883...752,567
G
LOC101954473
equatorin
located_in
ISO
(PMID:16831425)
MGI
PMID:16831425
NCBI chrNW_004936611:2,370,269...2,397,903
G
LOC101955400
AP-1 complex subunit sigma-3
located_in
IEA
TreeGrafter UniProt Ensembl
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936569:5,574,591...5,604,948
Ensembl chrNW_004936569:5,490,319...5,544,250 Ensembl chrNW_004936569:5,490,319...5,544,250
G
LOC101966195
huntingtin
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071 Ensembl chrNW_004936477:20,443,113...20,577,071
G
LOC101968020
transmembrane protein 230
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936492:10,625,442...10,626,682
G
LOC101968779
HLA class II histocompatibility antigen, DQ beta 1 chain-like
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
G
LOC101970551
inhibitor of carbonic anhydrase
located_in
ISO
(PMID:23416069), (PMID:24035762)
MGI
PMID:23416069 PMID:24035762
NCBI chrNW_004936529:6,856,042...6,895,989
G
LOC101970831
serotransferrin
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394
G
LOC101972188
nucleoside diphosphate kinase A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109
G
LOC101973421
amine oxidase copper containing 3
part_of located_in
ISO IEA
(PMID:23474851)
CACAO TreeGrafter
PMID:23474851
GO_REF:0000118
NCBI chrNW_004936490:17,549,836...17,564,867
G
LOC101973899
membrane primary amine oxidase
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936490:17,569,870...17,579,073
G
LOC101974931
tyrosine-protein phosphatase non-receptor type 1-like
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936509:1,583,714...1,585,304
G
LOC101978348
sodium/glucose cotransporter 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936755:1,467,787...1,535,135
Ensembl chrNW_004936755:1,467,787...1,535,042
G
LOC110599009
trafficking kinesin-binding protein 1
located_in
ISO
(PMID:18675823)
UniProt
PMID:18675823
NCBI chrNW_004936473:30,568,151...30,660,753
G
Lrp1
LDL receptor related protein 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
G
Lrp6
LDL receptor related protein 6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
G
Ltf
lactotransferrin
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936596:344,287...373,788
Ensembl chrNW_004936596:344,274...373,952
G
Map2k1
mitogen-activated protein kinase kinase 1
located_in
IEA
UniProt
GO_REF:0000117
NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
G
Map2k2
mitogen-activated protein kinase kinase 2
located_in
IEA
UniProt
GO_REF:0000117
NCBI chrNW_004936588:2,338,127...2,377,090
Ensembl chrNW_004936588:2,336,858...2,377,090
G
Mapk1
mitogen-activated protein kinase 1
located_in
IEA
UniProt
GO_REF:0000117
NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
G
Mapk3
mitogen-activated protein kinase 3
located_in
IEA
UniProt
GO_REF:0000117
NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
G
Mapkap1
MAPK associated protein 1
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936487:13,511,632...13,743,022
Ensembl chrNW_004936487:13,510,592...13,743,069
G
Meltf
melanotransferrin
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936833:853,925...875,069
Ensembl chrNW_004936833:853,007...875,547
G
Mgrn1
mahogunin ring finger 1
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936530:4,647,550...4,693,143
Ensembl chrNW_004936530:4,652,464...4,693,999
G
Mib2
MIB E3 ubiquitin protein ligase 2
located_in
ISO
(PMID:15824097)
MGI
PMID:15824097
NCBI chrNW_004936737:1,633,495...1,646,598
G
Micall1
MICAL like 1
NOT|located_in
ISO
(PMID:21795389)
UniProt
PMID:21795389
NCBI chrNW_004936492:3,200,754...3,227,983
Ensembl chrNW_004936492:3,204,969...3,226,559
G
Mlc1
modulator of VRAC current 1
located_in
ISO
PMID:19931615
UniProt
PMID:19931615
RGD:2326037
NCBI chrNW_004936629:696,592...719,363
Ensembl chrNW_004936629:696,451...719,416
G
Mme
membrane metalloendopeptidase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936519:2,513,896...2,595,896
Ensembl chrNW_004936519:2,513,704...2,595,971
G
Mmgt1
membrane magnesium transporter 1
located_in
IEA
TreeGrafter Ensembl UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936513:11,229,354...11,239,152
Ensembl chrNW_004936513:11,229,506...11,239,525
G
Mvb12b
multivesicular body subunit 12B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936487:14,178,299...14,431,687
Ensembl chrNW_004936487:14,277,942...14,431,709
G
Myo1b
myosin IB
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936506:6,832,132...7,004,262
Ensembl chrNW_004936506:6,832,670...7,004,273
G
Myo1d
myosin ID
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936538:2,102,192...2,408,953
Ensembl chrNW_004936538:2,102,186...2,408,954
G
Myo5a
myosin VA
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:14,105,832...14,257,386
Ensembl chrNW_004936471:14,111,841...14,254,246
G
Nae1
NEDD8 activating enzyme E1 subunit 1
ISO
RGD
PMID:17611268
RGD:13801047
NCBI chrNW_004936475:17,083,175...17,105,098
Ensembl chrNW_004936475:17,083,077...17,105,133
G
Ncstn
nicastrin
ISO
RGD
PMID:20126630
RGD:13702254
NCBI chrNW_004936740:285,789...301,918
Ensembl chrNW_004936740:285,657...302,111
G
Neurl1b
neuralized E3 ubiquitin protein ligase 1B
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936609:2,742,466...2,767,010
Ensembl chrNW_004936609:2,745,099...2,783,571
G
Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936657:3,536,212...3,622,999
Ensembl chrNW_004936657:3,536,141...3,623,821
G
Nipa1
NIPA magnesium transporter 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:38,363,521...38,403,647
Ensembl chrNW_004936471:38,364,940...38,407,314
G
Nipa2
NIPA magnesium transporter 2
located_in
ISO
(PMID:18667602)
UniProt
PMID:18667602
NCBI chrNW_004936471:38,332,371...38,359,239
G
Nox1
NADPH oxidase 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936584:6,023,960...6,040,041
Ensembl chrNW_004936584:6,024,008...6,039,866
G
Nrp1
neuropilin 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720
G
Nsg1
neuronal vesicle trafficking associated 1
located_in
ISO
PMID:28874679
UniProt
PMID:28874679
RGD:13432228
NCBI chrNW_004936477:17,025,057...17,046,353
Ensembl chrNW_004936477:17,025,044...17,046,014
G
Nsg2
neuronal vesicle trafficking associated 2
located_in
ISO
PMID:28874679
UniProt
PMID:28874679
RGD:13432228
NCBI chrNW_004936609:1,682,727...1,736,560
Ensembl chrNW_004936609:1,680,157...1,736,929
G
Ntrk1
neurotrophic receptor tyrosine kinase 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936580:6,002,168...6,021,690
Ensembl chrNW_004936580:6,002,120...6,021,709
G
Ntrk2
neurotrophic receptor tyrosine kinase 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928
G
Nucb1
nucleobindin 1
ISO
RGD
PMID:19497050
RGD:9831132
NCBI chrNW_004936664:2,924,186...2,946,035
Ensembl chrNW_004936664:2,924,719...2,945,178
G
Numb
NUMB endocytic adaptor protein
located_in
ISO
(PMID:11782429)
MGI
PMID:11782429
NCBI chrNW_004936488:2,579,017...2,742,961
G
Ocrl
OCRL inositol polyphosphate-5-phosphatase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936479:1,955,362...2,011,608
Ensembl chrNW_004936479:1,953,488...2,012,018
G
P2ry2
purinergic receptor P2Y2
located_in
ISO
RGD
PMID:15924261
RGD:2316682
NCBI chrNW_004936498:2,432,436...2,444,495
Ensembl chrNW_004936498:2,432,448...2,444,354
G
Pacsin2
protein kinase C and casein kinase substrate in neurons 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936718:739,133...850,775
Ensembl chrNW_004936718:739,133...801,662
G
Parm1
prostate androgen-regulated mucin-like protein 1
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936598:761,261...864,459
Ensembl chrNW_004936598:764,915...864,459
G
Pcsk9
proprotein convertase subtilisin/kexin type 9
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917
G
Phb1
prohibitin 1
located_in
ISO
(PMID:24732013)
UniProt
PMID:24732013
NCBI chrNW_004936490:12,127,065...12,138,870
Ensembl chrNW_004936490:12,127,065...12,138,870
G
Pheta1
PH domain containing endocytic trafficking adaptor 1
located_in
ISO
(PMID:21233288)
UniProt
PMID:21233288
NCBI chrNW_004936558:4,066,832...4,073,906
G
Pheta2
PH domain containing endocytic trafficking adaptor 2
located_in
ISO
(PMID:21233288)
UniProt
PMID:21233288
NCBI chrNW_004936718:50,354...55,699
G
Picalm
phosphatidylinositol binding clathrin assembly protein
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167
G
Pld4
phospholipase D family member 4
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936621:515,710...523,317
Ensembl chrNW_004936621:515,636...523,359
G
Plekha3
pleckstrin homology domain containing A3
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936509:7,693,287...7,717,259
Ensembl chrNW_004936509:7,693,287...7,718,088
G
Plekhf1
pleckstrin homology and FYVE domain containing 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936570:5,658,052...5,666,711
Ensembl chrNW_004936570:5,658,052...5,666,358
G
Plekhf2
pleckstrin homology and FYVE domain containing 2
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936544:8,063,374...8,086,104
Ensembl chrNW_004936544:8,063,392...8,084,956
G
Plekhj1
pleckstrin homology domain containing J1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936588:1,333,103...1,335,023
Ensembl chrNW_004936588:1,333,099...1,335,074
G
Plpp2
phospholipid phosphatase 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936588:14,422...20,467
Ensembl chrNW_004936588:14,399...20,514
G
Ppp1r21
protein phosphatase 1 regulatory subunit 21
located_in
IEA
TreeGrafter UniProt Ensembl
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936508:4,127,373...4,193,206
Ensembl chrNW_004936508:4,125,444...4,193,323
G
Prdx3
peroxiredoxin 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936486:8,597,479...8,606,727
Ensembl chrNW_004936486:8,597,388...8,606,780
G
Psen1
presenilin 1
ISO
RGD
PMID:20126630
RGD:13702254
NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
G
Psen2
presenilin 2
ISO
RGD
PMID:20126630
RGD:13702254
NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
G
Ptpn1
protein tyrosine phosphatase non-receptor type 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936514:4,065,455...4,083,847
Ensembl chrNW_004936514:4,068,238...4,084,009
G
Ptpn23
protein tyrosine phosphatase non-receptor type 23
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936596:1,094,285...1,124,483
Ensembl chrNW_004936596:1,094,205...1,124,712
G
Pxk
PX domain containing serine/threonine kinase like
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936473:2,587,145...2,635,083
Ensembl chrNW_004936473:2,587,990...2,635,189
G
Rab11fip5
RAB11 family interacting protein 5
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936491:16,883,972...16,919,539
Ensembl chrNW_004936491:16,886,065...16,919,545
G
Rab14
RAB14, member RAS oncogene family
located_in
ISO
PMID:15004230
RGD UniProt
PMID:15004230 PMID:18429929
RGD:2306297 RGD:8554557
NCBI chrNW_004936487:9,675,517...9,699,469
Ensembl chrNW_004936487:9,673,487...9,690,654
G
Rab17
RAB17, member RAS oncogene family
NOT|located_in
ISO
(PMID:21291502)
UniProt
PMID:21291502
NCBI chrNW_004936525:748,851...765,636
Ensembl chrNW_004936525:748,600...765,642
G
Rab1a
RAB1A, member RAS oncogene family
located_in
ISO
PMID:21303926
UniProt
PMID:21303926
RGD:8554665
NCBI chrNW_004936491:9,858,645...9,891,674
G
Rab22a
RAB22A, member RAS oncogene family
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936530:907,359...963,490
Ensembl chrNW_004936530:907,400...963,488
G
Rab29
RAB29, member RAS oncogene family
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936557:6,673,092...6,679,715
Ensembl chrNW_004936557:6,673,065...6,683,468
G
Rab31
RAB31, member RAS oncogene family
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936626:1,628,379...1,673,150
Ensembl chrNW_004936626:1,628,451...1,660,510
G
Rab32
RAB32, member RAS oncogene family
located_in
ISO
(PMID:22511774)
ParkinsonsUK-UCL
PMID:22511774
NCBI chrNW_004936489:35,620...51,809
G
Rab34
RAB34, member RAS oncogene family
located_in
ISO
(PMID:12446704)
MGI
PMID:12446704
NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809
G
Rab38
RAB38, member RAS oncogene family
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936736:1,304,290...1,360,412
Ensembl chrNW_004936736:1,304,185...1,361,221
G
Rab5a
RAB5A, member RAS oncogene family
located_in
ISO IEA
RGD Ensembl
PMID:18353411
GO_REF:0000107 RGD:2306454
NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089
G
Rabep1
rabaptin, RAB GTPase binding effector protein 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936677:2,417,676...2,481,587
Ensembl chrNW_004936677:2,417,679...2,512,868
G
Rabep2
rabaptin, RAB GTPase binding effector protein 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936501:11,807,369...11,818,350
Ensembl chrNW_004936501:11,806,836...11,817,838
G
Rabgap1l
RAB GTPase activating protein 1 like
located_in
ISO
(PMID:16923123)
MGI
PMID:16923123
NCBI chrNW_004936481:13,213,465...13,771,188
Ensembl chrNW_004936481:13,218,553...13,749,173
G
Rabgef1
RAB guanine nucleotide exchange factor 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936543:7,405,070...7,447,940
Ensembl chrNW_004936543:7,404,944...7,447,173
G
Rap1a
RAP1A, member of RAS oncogene family
located_in
ISO
PMID:17724123
RGD UniProt
PMID:17724123 PMID:17822405
RGD:10040965 RGD:8554481
NCBI chrNW_004936690:275,840...363,752
Ensembl chrNW_004936690:315,752...366,413
G
Rap1gap
RAP1 GTPase activating protein
ISO
RGD
PMID:20877310
RGD:9835042
NCBI chrNW_004936474:7,242,528...7,284,342
Ensembl chrNW_004936474:7,242,824...7,284,395
G
Rapgef1
Rap guanine nucleotide exchange factor 1
located_in
ISO
(PMID:17724123)
UniProt
PMID:17724123
NCBI chrNW_004936487:18,305,537...18,411,170
Ensembl chrNW_004936487:18,305,488...18,410,952
G
Rbsn
rabenosyn, RAB effector
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936602:586,284...607,088
Ensembl chrNW_004936602:586,169...607,158
G
Rcsd1
RCSD domain containing 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936481:18,395,577...18,447,323
Ensembl chrNW_004936481:18,395,281...18,447,386
G
Ret
ret proto-oncogene
ISO
RGD
PMID:20877310
RGD:9835042
NCBI chrNW_004936617:2,927,185...2,980,594
Ensembl chrNW_004936617:2,927,155...2,980,602
G
Rhob
ras homolog family member B
located_in
ISO
(PMID:17623777)
MGI
PMID:17623777
NCBI chrNW_004936493:10,987,801...10,990,207
G
Rin3
Ras and Rab interactor 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936733:683,309...765,897
Ensembl chrNW_004936733:683,272...765,906
G
Rnd2
Rho family GTPase 2
ISO
RGD
PMID:11931639
RGD:2290289
NCBI chrNW_004936490:17,718,813...17,725,556
Ensembl chrNW_004936490:17,718,205...17,726,574
G
Rps6kc1
ribosomal protein S6 kinase C1
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936557:361,071...578,298
Ensembl chrNW_004936557:358,221...578,453
G
Rubcn
rubicon autophagy regulator
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936784:370,173...438,263
Ensembl chrNW_004936784:383,899...438,275
G
Rusc1
RUN and SH3 domain containing 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936580:4,808,620...4,818,097
Ensembl chrNW_004936580:4,808,546...4,818,221
G
Samd9l
sterile alpha motif domain containing 9 like
located_in
ISO
(PMID:24029230)
MGI
PMID:24029230
NCBI chrNW_004936803:731,878...754,540
Ensembl chrNW_004936803:749,740...754,473
G
Sh3gl3
SH3 domain containing GRB2 like 3, endophilin A3
part_of located_in
ISO IEA
PMID:17088211
CACAO UniProt
PMID:17088211
GO_REF:0000044 RGD:10047209
NCBI chrNW_004936483:18,051,023...18,176,514
Ensembl chrNW_004936483:18,050,899...18,176,519
G
Sh3glb1
SH3 domain containing GRB2 like, endophilin B1
ISO
RGD
PMID:18768694
RGD:13504749
NCBI chrNW_004936732:2,066,848...2,097,947
Ensembl chrNW_004936732:2,067,204...2,097,631
G
Siah1
siah E3 ubiquitin protein ligase 1
ISO
RGD
PMID:11786535
RGD:633984
NCBI chrNW_004936475:1,589,997...1,621,506
Ensembl chrNW_004936475:1,590,004...1,594,894
G
Siah2
siah E3 ubiquitin protein ligase 2
ISO
RGD
PMID:11786535
RGD:633984
NCBI chrNW_004936758:1,115,980...1,132,225
Ensembl chrNW_004936758:1,116,056...1,213,442
G
Siglec1
sialic acid binding Ig like lectin 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936485:14,979,838...14,999,047
Ensembl chrNW_004936485:14,979,819...14,998,004
G
Slc11a2
solute carrier family 11 member 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936512:8,590,302...8,622,121
Ensembl chrNW_004936512:8,586,262...8,623,597
G
Slc17a6
solute carrier family 17 member 6
ISO
RGD
PMID:11551935
RGD:628484
NCBI chrNW_004936654:3,039,825...3,082,788
Ensembl chrNW_004936654:3,040,312...3,083,669
G
Slc2a13
solute carrier family 2 member 13
NOT|located_in
ISO
(PMID:14749729)
ARUK-UCL
PMID:14749729
NCBI chrNW_004936607:909,691...1,185,550
Ensembl chrNW_004936607:909,677...1,186,922
G
SLC30A10
solute carrier family 30 member 10
located_in
IEA
Ensembl
GO_REF:0000107
Ensembl chrNW_004936650:2,252,546...2,267,017
G
Slc35d3
solute carrier family 35 member D3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936560:4,309,136...4,313,259
Ensembl chrNW_004936560:4,308,928...4,313,347
G
Slc5a7
solute carrier family 5 member 7
ISO
RGD
PMID:15953352
RGD:9999386
NCBI chrNW_004936729:1,511,648...1,534,042
Ensembl chrNW_004936729:1,511,836...1,536,200
G
Slc9a3
solute carrier family 9 member A3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280
G
Slc9a6
solute carrier family 9 member A6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936513:11,158,609...11,215,477
Ensembl chrNW_004936513:11,158,730...11,215,568
G
Slc9a9
solute carrier family 9 member A9
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936540:4,843,798...5,384,305
Ensembl chrNW_004936540:4,845,212...5,384,170
G
Snx1
sorting nexin 1
located_in
ISO
(PMID:19549681)
MGI RGD
PMID:11110793 PMID:19549681
RGD:68866
NCBI chrNW_004936471:24,569,677...24,617,016
Ensembl chrNW_004936471:24,569,609...24,619,826
G
Snx12
sorting nexin 12
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936762:523,641...534,646
Ensembl chrNW_004936762:523,564...542,757
G
Snx13
sorting nexin 13
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936546:4,127,333...4,270,107
Ensembl chrNW_004936546:4,127,227...4,270,473
G
Snx16
sorting nexin 16
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936656:2,457,418...2,500,281
Ensembl chrNW_004936656:2,457,409...2,502,847
G
Snx17
sorting nexin 17
located_in
IEA
TreeGrafter Ensembl UniProt
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936493:5,207,134...5,212,957
Ensembl chrNW_004936493:5,204,846...5,212,957
G
Snx27
sorting nexin 27
located_in
IEA
UniProt Ensembl TreeGrafter
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936580:1,815,582...1,893,076
Ensembl chrNW_004936580:1,815,651...1,893,753
G
Snx3
sorting nexin 3
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936564:4,472,171...4,520,732
Ensembl chrNW_004936564:4,471,652...4,520,785
G
Snx30
sorting nexin family member 30
located_in is_active_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936559:684,536...792,829
Ensembl chrNW_004936559:690,397...792,835
G
Snx31
sorting nexin 31
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936470:42,684,346...42,743,001
Ensembl chrNW_004936470:42,684,346...42,742,092
G
Snx4
sorting nexin 4
is_active_in
ISO
(PMID:32513819)
UniProt
PMID:32513819
NCBI chrNW_004937215:127,074...137,281
G
Snx7
sorting nexin 7
located_in is_active_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936537:940,282...1,022,903
Ensembl chrNW_004936537:940,724...1,022,887
G
Sorl1
sortilin related receptor 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936542:6,192,407...6,352,835
Ensembl chrNW_004936542:6,192,407...6,352,424
G
Sort1
sortilin 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936704:832,651...901,658
Ensembl chrNW_004936704:837,057...901,392
G
St8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936483:10,278,843...10,343,177
Ensembl chrNW_004936483:10,278,838...10,313,905
G
Steap2
STEAP2 metalloreductase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936621:3,784,628...3,806,787
Ensembl chrNW_004936621:3,779,745...3,806,851
G
Stx6
syntaxin 6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936481:8,362,059...8,405,228
Ensembl chrNW_004936481:8,362,050...8,399,737
G
Stx7
syntaxin 7
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936560:464,667...512,322
Ensembl chrNW_004936560:464,617...513,009
G
Stx8
syntaxin 8
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936595:2,328,763...2,578,788
Ensembl chrNW_004936595:2,328,740...2,578,791
G
Tbc1d16
TBC1 domain family member 16
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936594:4,013,922...4,071,128
Ensembl chrNW_004936594:4,013,560...4,071,177
G
Tbc1d2b
TBC1 domain family member 2B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:36,905,690...36,976,916
Ensembl chrNW_004936471:36,905,684...36,981,220
G
Tfrc
transferrin receptor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543
G
Tgfbrap1
transforming growth factor beta receptor associated protein 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936764:675,615...747,613
Ensembl chrNW_004936764:701,116...747,621
G
Ticam1
toll like receptor adaptor molecule 1
is_active_in
ISO
(PMID:17982077)
UniProt
PMID:17982077
NCBI chrNW_004936588:2,818,909...2,827,797
G
Ticam2
toll like receptor adaptor molecule 2
located_in
ISO
(PMID:19412184)
UniProt
PMID:19412184
NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277
G
Tlr3
toll like receptor 3
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907
G
Tlr4
toll like receptor 4
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095
G
Tm9sf4
transmembrane 9 superfamily member 4
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936485:19,029,181...19,079,468
Ensembl chrNW_004936485:19,029,073...19,080,830
G
Tmem108
transmembrane protein 108
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936529:6,326,775...6,629,247
Ensembl chrNW_004936529:6,326,702...6,629,898
G
Tmem127
transmembrane protein 127
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936744:344,356...359,086
Ensembl chrNW_004936744:344,356...359,044
G
Tmem230
transmembrane protein 230
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936485:13,772,093...13,779,201
Ensembl chrNW_004936485:13,772,106...13,779,201
G
Tom1
target of myb1 membrane trafficking protein
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936492:5,073,274...5,103,733
Ensembl chrNW_004936492:5,073,191...5,103,739
G
Trak2
trafficking kinesin protein 2
located_in
ISO
RGD
PMID:17062640
RGD:13208835
NCBI chrNW_004936726:649,413...708,816
Ensembl chrNW_004936726:649,418...708,820
G
Trappc9
trafficking protein particle complex subunit 9
NOT|located_in
ISO
(PMID:20004763)
MGI
PMID:20004763
NCBI chrNW_004936470:10,747,343...11,243,052
Ensembl chrNW_004936470:10,750,994...11,242,523
G
Tsg101
tumor susceptibility 101
located_in
ISO
(PMID:11916981), (PMID:17229889)
UniProt
PMID:11916981 PMID:17229889
NCBI chrNW_004936590:61,352...62,037
G
Usp10
ubiquitin specific peptidase 10
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936641:3,308,121...3,350,476
Ensembl chrNW_004936641:3,307,931...3,350,517
G
Usp8
ubiquitin specific peptidase 8
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:12,463,189...12,524,148
Ensembl chrNW_004936471:12,463,120...12,520,674
G
Uts2r
urotensin 2 receptor
ISO
RGD
PMID:16141412
RGD:2306843
NCBI chrNW_004936923:24,952...31,083
G
Uvrag
UV radiation resistance associated
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936498:4,555,325...4,869,099
Ensembl chrNW_004936498:4,555,276...4,870,896
G
Vamp3
vesicle associated membrane protein 3
located_in
ISO
(PMID:20847273)
MGI
PMID:20847273
NCBI chrNW_004936623:2,280,534...2,287,898
G
Vcam1
vascular cell adhesion molecule 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936748:785,491...802,791
Ensembl chrNW_004936748:785,455...803,048
G
Vipas39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936488:6,247,329...6,277,494
Ensembl chrNW_004936488:6,247,296...6,277,506
G
Vps11
VPS11 core subunit of CORVET and HOPS complexes
located_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936542:4,022,928...4,035,577
Ensembl chrNW_004936542:4,023,134...4,035,260
G
Vps16
VPS16 core subunit of CORVET and HOPS complexes
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936485:15,879,324...15,900,544
Ensembl chrNW_004936485:15,879,327...15,900,544
G
Vps18
VPS18 core subunit of CORVET and HOPS complexes
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:4,289,487...4,297,634
Ensembl chrNW_004936471:4,289,415...4,298,852
G
Vps26a
VPS26, retromer complex component A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936521:9,269,714...9,308,016
Ensembl chrNW_004936521:9,269,287...9,308,153
G
Vps26b
VPS26, retromer complex component B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936684:1,597,706...1,617,689
Ensembl chrNW_004936684:1,599,754...1,617,662
G
Vps28
VPS28 subunit of ESCRT-I
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936470:7,829,207...7,833,213
Ensembl chrNW_004936470:7,830,114...7,833,047
G
Vps33a
VPS33A core subunit of CORVET and HOPS complexes
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936558:2,227,305...2,257,725
Ensembl chrNW_004936558:2,227,253...2,257,722
G
Vps35
VPS35 retromer complex component
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936475:50,476...77,797
Ensembl chrNW_004936475:50,321...78,097
G
Vps41
VPS41 subunit of HOPS complex
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936478:14,296,191...14,454,650
Ensembl chrNW_004936478:14,293,108...14,454,707
G
Vps4a
vacuolar protein sorting 4 homolog A
located_in
ISO IEA
RGD Ensembl
PMID:11931639
GO_REF:0000107 RGD:2290289
NCBI chrNW_004936475:19,432,311...19,444,223
Ensembl chrNW_004936475:19,432,229...19,444,223
G
Vps8
VPS8 subunit of CORVET complex
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936578:4,842,899...5,091,439
Ensembl chrNW_004936578:4,840,636...5,091,474
G
Wasf2
WASP family member 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:11,711,582...11,736,154
Ensembl chrNW_004936474:11,711,582...11,735,897
G
Washc1
WASH complex subunit 1
located_in
IEA
TreeGrafter Ensembl InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936606:209,289...228,986
G
Washc2a
WASH complex subunit 2A
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936728:263,790...320,428
G
Washc5
WASH complex subunit 5
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936470:22,667,354...22,725,538
Ensembl chrNW_004936470:22,667,127...22,725,749
G
Wdfy2
WD repeat and FYVE domain containing 2
located_in
IEA
TreeGrafter Ensembl UniProt
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936565:4,375,012...4,527,259
Ensembl chrNW_004936565:4,375,462...4,520,691
G
Wipf3
WAS/WASL interacting protein family member 3
located_in
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004936478:6,186,405...6,208,588
Ensembl chrNW_004936478:6,186,483...6,206,957
G
Wls
Wnt ligand secretion mediator
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936591:3,537,981...3,639,774
Ensembl chrNW_004936591:3,537,981...3,639,774
G
Zfyve16
zinc finger FYVE-type containing 16
located_in
ISO
(PMID:11546807)
UniProt
PMID:11546807
NCBI chrNW_004936549:8,082,464...8,110,116
G
Zfyve26
zinc finger FYVE-type containing 26
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936495:11,132,025...11,191,446
Ensembl chrNW_004936495:11,134,138...11,190,863
G
Zfyve9
zinc finger FYVE-type containing 9
located_in
IEA
UniProt
GO_REF:0000104
NCBI chrNW_004936522:8,632,626...8,808,008
Ensembl chrNW_004936522:8,633,043...8,808,008
G
Litaf
lipopolysaccharide induced TNF factor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936530:9,409,378...9,421,974
Ensembl chrNW_004936530:9,409,692...9,421,974
G
LOC101966732
sorting nexin-5-like
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936584:1,143,173...1,144,374
G
Rab21
RAB21, member RAS oncogene family
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936568:814,647...846,426
Ensembl chrNW_004936568:814,656...846,206
G
Rab5a
RAB5A, member RAS oncogene family
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089
G
Snx5
sorting nexin 5
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936485:2,167,987...2,191,157
Ensembl chrNW_004936485:2,168,243...2,190,402
G
Pdlim4
PDZ and LIM domain 4
located_in
ISO
PMID:15456832
UniProt
PMID:15456832
RGD:13432260
NCBI chrNW_004936647:2,891,025...2,905,197
Ensembl chrNW_004936647:2,890,510...2,905,203
G
Rab32
RAB32, member RAS oncogene family
NOT|located_in
ISO
(PMID:22511774)
ParkinsonsUK-UCL
PMID:22511774
NCBI chrNW_004936489:35,620...51,809
G
Rab38
RAB38, member RAS oncogene family
NOT|located_in
ISO
(PMID:22511774)
ParkinsonsUK-UCL
PMID:22511774
NCBI chrNW_004936736:1,304,290...1,360,412
Ensembl chrNW_004936736:1,304,185...1,361,221
G
Abcb6
ATP binding cassette subfamily B member 6 (LAN blood group)
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936569:1,628,649...1,635,599
Ensembl chrNW_004936569:1,625,374...1,635,694
G
Abcc4
ATP binding cassette subfamily C member 4 (PEL blood group)
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936472:14,396,986...14,624,597
Ensembl chrNW_004936472:14,397,222...14,624,648
G
Anxa1
annexin A1
located_in
ISO
(PMID:8885232)
UniProt
PMID:8885232
NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413
G
App
amyloid beta precursor protein
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286
G
Appl1
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923
G
Appl2
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692
G
Arl8b
ARF like GTPase 8B
located_in is_active_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936577:4,430,939...4,475,186
Ensembl chrNW_004936577:4,430,898...4,475,212
G
Atp11b
ATPase phospholipid transporting 11B (putative)
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936566:577,975...691,849
Ensembl chrNW_004936566:578,258...678,949
G
Atp13a3
ATPase 13A3
located_in
ISO
(PMID:29505581)
UniProt
PMID:29505581
NCBI chrNW_004936711:325,978...400,374
Ensembl chrNW_004936711:354,020...397,145
G
Atp13a4
ATPase 13A4
located_in
ISO
(PMID:29505581)
UniProt
PMID:29505581
NCBI chrNW_004936711:1,151,847...1,275,517
Ensembl chrNW_004936711:1,151,943...1,275,518
G
Atp7a
ATPase copper transporting alpha
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040
G
Atp9a
ATPase phospholipid transporting 9A (putative)
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936514:3,341,207...3,428,948
Ensembl chrNW_004936514:3,341,426...3,424,637
G
Baiap3
BAI1 associated protein 3
NOT|located_in
ISO
(PMID:28626000)
UniProt
PMID:28626000
NCBI chrNW_004936694:2,542,521...2,556,540
Ensembl chrNW_004936694:2,543,195...2,556,540
G
Bok
BCL2 family apoptosis regulator BOK
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936745:344,837...350,950
Ensembl chrNW_004936745:345,635...351,749
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Cd274
CD274 molecule
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936539:132,870...145,288
Ensembl chrNW_004936539:132,868...143,602
G
Clcn3
chloride voltage-gated channel 3
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936516:1,678,610...1,760,099
Ensembl chrNW_004936516:1,678,653...1,760,294
G
Clip3
CAP-Gly domain containing linker protein 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936922:50,230...63,215
Ensembl chrNW_004936922:49,894...63,158
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436
G
Clvs1
clavesin 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936496:11,814,627...12,008,233
Ensembl chrNW_004936496:11,812,646...12,008,355
G
Clvs2
clavesin 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936802:872,224...936,660
Ensembl chrNW_004936802:872,577...936,649
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Cmtm6
CKLF like MARVEL transmembrane domain containing 6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936473:22,968,397...22,990,273
Ensembl chrNW_004936473:22,968,395...22,990,290
G
Dagla
diacylglycerol lipase alpha
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936581:1,371,292...1,430,699
Ensembl chrNW_004936581:1,371,262...1,430,801
G
Dnajc13
DnaJ heat shock protein family (Hsp40) member C13
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936529:5,768,229...5,883,841
Ensembl chrNW_004936529:5,785,538...5,883,097
G
Dop1b
DOP1 leucine zipper like protein B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936500:6,351,529...6,451,632
Ensembl chrNW_004936500:6,351,340...6,451,622
G
Eea1
early endosome antigen 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936507:9,331,572...9,465,708
Ensembl chrNW_004936507:9,331,455...9,424,835
G
Egfr
epidermal growth factor receptor
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
G
Ehd1
EH domain containing 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:4,451,207...4,473,078
Ensembl chrNW_004936599:4,450,188...4,473,738
G
Entrep1
endosomal transmembrane epsin interactor 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936503:5,611,867...5,671,947
Ensembl chrNW_004936503:5,610,573...5,672,308
G
Epha4
EPH receptor A4
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348
G
Ephb1
EPH receptor B1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942
G
Fcmr
Fc mu receptor
located_in
ISO
(PMID:21908732)
UniProt
PMID:21908732
NCBI chrNW_004936557:5,707,138...5,718,192
G
Gga1
golgi associated, gamma adaptin ear containing, ARF binding protein 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936492:3,445,271...3,464,960
Ensembl chrNW_004936492:3,445,094...3,464,809
G
Gga2
golgi associated, gamma adaptin ear containing, ARF binding protein 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936501:8,142,932...8,174,619
Ensembl chrNW_004936501:8,141,000...8,174,672
G
Gga3
golgi associated, gamma adaptin ear containing, ARF binding protein 3
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936594:531,844...548,487
Ensembl chrNW_004936594:532,342...548,440
G
Gpr65
G protein-coupled receptor 65
is_active_in
ISO
(PMID:20855608)
UniProt
PMID:20855608
NCBI chrNW_004936488:15,544,075...15,545,344
Ensembl chrNW_004936488:15,544,149...15,545,156
G
Gria1
glutamate ionotropic receptor AMPA type subunit 1
located_in
ISO
PMID:15456832
UniProt
PMID:15456832
RGD:13432260
NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151
G
Hgs
hepatocyte growth factor-regulated tyrosine kinase substrate
located_in
IEA
UniProt
GO_REF:0000044 GO_REF:0000104
NCBI chrNW_004936594:5,285,678...5,301,267
Ensembl chrNW_004936594:5,285,551...5,301,233
G
Hps6
HPS6 biogenesis of lysosomal organelles complex 2 subunit 3
located_in
IEA
UniProt
GO_REF:0000104
NCBI chrNW_004936600:3,754,324...3,757,048
Ensembl chrNW_004936600:3,754,460...3,756,880
G
Inpp5b
inositol polyphosphate-5-phosphatase B
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936474:20,028,575...20,083,931
Ensembl chrNW_004936474:20,028,585...20,083,906
G
Kcnh1
potassium voltage-gated channel subfamily H member 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936557:2,133,596...2,493,170
Ensembl chrNW_004936557:2,133,564...2,493,155
G
Lamp5
lysosomal associated membrane protein family member 5
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936485:9,952,975...9,964,358
Ensembl chrNW_004936485:9,952,159...9,957,016
G
Ldlrad4
low density lipoprotein receptor class A domain containing 4
located_in
IEA
TreeGrafter UniProt
GO_REF:0000044 GO_REF:0000118
NCBI chrNW_004936626:2,730,689...3,088,527
Ensembl chrNW_004936626:2,865,352...3,081,703
G
Llgl1
LLGL scribble cell polarity complex component 1
located_in
ISO
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chrNW_004936741:1,770,797...1,784,716
Ensembl chrNW_004936741:1,770,620...1,788,356
G
LOC101955772
olfactory receptor 51E2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936498:398,888...416,085
Ensembl chrNW_004936498:398,888...416,085
G
LOC101961439
twinfilin-2
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593
G
LOC101964747
metal cation symporter ZIP14-like
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004939371:713...6,116
G
LOC101972633
major histocompatibility complex class I-related gene protein
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936481:8,325,918...8,347,941
Ensembl chrNW_004936481:8,327,690...8,347,960
G
Mapkap1
MAPK associated protein 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936487:13,511,632...13,743,022
Ensembl chrNW_004936487:13,510,592...13,743,069
G
Marchf1
membrane associated ring-CH-type finger 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936555:1,810,896...2,097,870
Ensembl chrNW_004936555:1,610,268...2,097,985
G
Marchf3
membrane associated ring-CH-type finger 3
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936504:237,260...422,587
Ensembl chrNW_004936504:237,281...272,747
G
Mmgt1
membrane magnesium transporter 1
located_in
IEA
UniProt
GO_REF:0000044 GO_REF:0000104
NCBI chrNW_004936513:11,229,354...11,239,152
Ensembl chrNW_004936513:11,229,506...11,239,525
G
Mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936545:1,140,863...1,246,708
Ensembl chrNW_004936545:1,141,251...1,246,185
G
Mtmr2
myotubularin related protein 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936700:1,790,592...1,873,019
Ensembl chrNW_004936700:1,790,064...1,873,034
G
Mtmr4
myotubularin related protein 4
located_in
ISO
(PMID:20736309)
UniProt
PMID:20736309
NCBI chrNW_004936490:4,611,350...4,638,181
Ensembl chrNW_004936490:4,611,517...4,638,511
G
Neu3
neuraminidase 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936498:3,897,511...3,915,013
Ensembl chrNW_004936498:3,897,485...3,910,115
G
Nsg1
neuronal vesicle trafficking associated 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936477:17,025,057...17,046,353
Ensembl chrNW_004936477:17,025,044...17,046,014
G
Ocrl
OCRL inositol polyphosphate-5-phosphatase
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936479:1,955,362...2,011,608
Ensembl chrNW_004936479:1,953,488...2,012,018
G
Osbpl6
oxysterol binding protein like 6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936509:7,414,887...7,610,412
Ensembl chrNW_004936509:7,414,769...7,613,622
G
Pdlim4
PDZ and LIM domain 4
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936647:2,891,025...2,905,197
Ensembl chrNW_004936647:2,890,510...2,905,203
G
Pi4k2a
phosphatidylinositol 4-kinase type 2 alpha
located_in
ISO IEA
RGD Ensembl
PMID:18256276
GO_REF:0000107 RGD:2306408
NCBI chrNW_004936636:2,054,672...2,083,580
Ensembl chrNW_004936636:2,053,826...2,083,633
G
Pi4k2b
phosphatidylinositol 4-kinase type 2 beta
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936477:4,244,888...4,273,569
Ensembl chrNW_004936477:4,245,501...4,273,571
G
Pikfyve
phosphoinositide kinase, FYVE-type zinc finger containing
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078
G
Pla2g4b
phospholipase A2 group IVB
located_in
ISO
(PMID:16617059)
UniProt
PMID:16617059
NCBI chrNW_004936471:5,145,736...5,153,930
Ensembl chrNW_004936471:5,145,502...5,153,498
G
Pla2g4e
phospholipase A2 group IVE
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:5,300,932...5,370,150
Ensembl chrNW_004936471:5,302,688...5,370,182
G
Pld3
phospholipase D family member 3
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936661:2,741,523...2,763,945
Ensembl chrNW_004936661:2,741,234...2,767,121
G
Pmepa1
prostate transmembrane protein, androgen induced 1
located_in
IEA
TreeGrafter UniProt Ensembl
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936530:429,059...439,847
Ensembl chrNW_004936530:429,045...439,866
G
Psen1
presenilin 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
G
Rab14
RAB14, member RAS oncogene family
located_in is_active_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936487:9,675,517...9,699,469
Ensembl chrNW_004936487:9,673,487...9,690,654
G
Rab4a
RAB4A, member RAS oncogene family
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936484:20,281,495...20,301,906
Ensembl chrNW_004936484:20,281,435...20,301,391
G
Rab4b
RAB4B, member RAS oncogene family
located_in is_active_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936661:3,049,802...3,059,921
Ensembl chrNW_004936661:3,049,638...3,059,963
G
Rac1
Rac family small GTPase 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676
G
Rcc2
regulator of chromosome condensation 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:4,265,572...4,307,283
Ensembl chrNW_004936474:4,265,578...4,281,364
G
Rufy1
RUN and FYVE domain containing 1
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936739:1,148,676...1,206,485
Ensembl chrNW_004936739:1,148,689...1,206,064
G
Sh3gl1
SH3 domain containing GRB2 like 1, endophilin A2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936588:2,504,372...2,535,993
Ensembl chrNW_004936588:2,504,374...2,536,011
G
Slc15a4
solute carrier family 15 member 4
located_in
ISO
(PMID:19570976)
UniProt
PMID:19570976
NCBI chrNW_004936660:481,772...493,567
G
Slc1a1
solute carrier family 1 member 1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721
G
SLC30A10
solute carrier family 30 member 10
located_in
IEA
Ensembl
GO_REF:0000107
Ensembl chrNW_004936650:2,252,546...2,267,017
G
Slc31a1
solute carrier family 31 member 1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936559:333,461...364,737
Ensembl chrNW_004936559:331,917...364,852
G
Slc35d3
solute carrier family 35 member D3
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936560:4,309,136...4,313,259
Ensembl chrNW_004936560:4,308,928...4,313,347
G
Slc39a14
solute carrier family 39 member 14
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004939045:1...7,491
G
Slc5a7
solute carrier family 5 member 7
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936729:1,511,648...1,534,042
Ensembl chrNW_004936729:1,511,836...1,536,200
G
Slc9a3
solute carrier family 9 member A3
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280
G
Slc9a6
solute carrier family 9 member A6
located_in
ISO
(PMID:11940519), (PMID:28635961)
UniProt
PMID:11940519 PMID:28635961
NCBI chrNW_004936513:11,158,609...11,215,477
Ensembl chrNW_004936513:11,158,730...11,215,568
G
Snx1
sorting nexin 1
located_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936471:24,569,677...24,617,016
Ensembl chrNW_004936471:24,569,609...24,619,826
G
Snx12
sorting nexin 12
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936762:523,641...534,646
Ensembl chrNW_004936762:523,564...542,757
G
Snx19
sorting nexin 19
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936572:1,529,329...1,567,991
Ensembl chrNW_004936572:1,529,262...1,571,144
G
Snx2
sorting nexin 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936575:3,150,409...3,223,420
Ensembl chrNW_004936575:3,150,361...3,226,311
G
SNX20
sorting nexin 20
located_in
IEA
TreeGrafter UniProt
GO_REF:0000044 GO_REF:0000118
Ensembl chrNW_004936475:3,681,533...3,699,406
G
Snx21
sorting nexin family member 21
located_in
IEA
TreeGrafter UniProt Ensembl
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936514:7,180,533...7,188,201
Ensembl chrNW_004936514:7,180,851...7,186,146
G
Snx3
sorting nexin 3
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936564:4,472,171...4,520,732
Ensembl chrNW_004936564:4,471,652...4,520,785
G
Snx30
sorting nexin family member 30
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936559:684,536...792,829
Ensembl chrNW_004936559:690,397...792,835
G
Snx4
sorting nexin 4
is_active_in located_in
ISO IEA
(PMID:33468622)
UniProt TreeGrafter
PMID:33468622
GO_REF:0000118
NCBI chrNW_004937215:127,074...137,281
G
Snx6
sorting nexin 6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936494:8,819,695...8,880,298
Ensembl chrNW_004936494:8,821,147...8,879,446
G
Snx7
sorting nexin 7
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936537:940,282...1,022,903
Ensembl chrNW_004936537:940,724...1,022,887
G
Snx8
sorting nexin 8
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936823:18,972...62,924
Ensembl chrNW_004936823:18,248...62,936
G
Sorcs2
sortilin related VPS10 domain containing receptor 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936477:18,952,965...19,279,053
Ensembl chrNW_004936477:18,952,959...19,279,198
G
Sorl1
sortilin related receptor 1
located_in is_active_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936542:6,192,407...6,352,835
Ensembl chrNW_004936542:6,192,407...6,352,424
G
Sphk1
sphingosine kinase 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
G
Stam
signal transducing adaptor molecule
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936520:9,627,674...9,689,658
Ensembl chrNW_004936520:9,624,628...9,689,686
G
Stam2
signal transducing adaptor molecule 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936469:25,432,067...25,481,089
Ensembl chrNW_004936469:25,431,917...25,482,347
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Stx7
syntaxin 7
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936560:464,667...512,322
Ensembl chrNW_004936560:464,617...513,009
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Syndig1
synapse differentiation inducing 1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chrNW_004936620:1,165,312...1,359,127
Ensembl chrNW_004936620:1,165,709...1,359,179
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Tmem163
transmembrane protein 163
located_in
ISO
PMID:21668449
UniProt
PMID:21668449
RGD:8553679
NCBI chrNW_004936469:57,882,130...58,097,965
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Tmem184a
transmembrane protein 184A
located_in
ISO
(PMID:18321981)
MGI
PMID:18321981
NCBI chrNW_004936754:1,659,260...1,675,137
Ensembl chrNW_004936754:1,659,157...1,673,079
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Tmem30a
transmembrane protein 30A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936788:693,523...723,057
Ensembl chrNW_004936788:693,573...723,057
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Tmem63a
transmembrane protein 63A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936526:2,653,556...2,690,427
Ensembl chrNW_004936526:2,652,111...2,690,451
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Tmem63b
transmembrane protein 63B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936476:15,910,186...15,928,570
Ensembl chrNW_004936476:15,910,459...15,934,169
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Tmem9b
TMEM9 domain family member B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936528:9,106,373...9,121,441
Ensembl chrNW_004936528:9,106,358...9,121,437
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Tpcn1
two pore segment channel 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936668:3,111,038...3,162,163
Ensembl chrNW_004936668:3,111,002...3,163,396
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Ubxn6
UBX domain protein 6
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936588:2,565,473...2,578,721
Ensembl chrNW_004936588:2,565,461...2,578,624
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Vps16
VPS16 core subunit of CORVET and HOPS complexes
located_in
ISO
(PMID:21411634)
UniProt
PMID:21411634
NCBI chrNW_004936485:15,879,324...15,900,544
Ensembl chrNW_004936485:15,879,327...15,900,544
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Vps33b
VPS33B late endosome and lysosome associated
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936483:16,007,448...16,031,353
Ensembl chrNW_004936483:16,007,465...16,032,392
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Vps41
VPS41 subunit of HOPS complex
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936478:14,296,191...14,454,650
Ensembl chrNW_004936478:14,293,108...14,454,707
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Vti1b
vesicle transport through interaction with t-SNAREs 1B
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936495:11,043,813...11,064,113
Ensembl chrNW_004936495:11,045,429...11,064,206
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Washc1
WASH complex subunit 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936606:209,289...228,986
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Washc2a
WASH complex subunit 2A
located_in
IEA
UniProt
GO_REF:0000044
NCBI chrNW_004936728:263,790...320,428
G
Wdr81
WD repeat domain 81
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936538:7,856,263...7,868,249
Ensembl chrNW_004936538:7,856,185...7,868,259
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Wdr91
WD repeat domain 91
located_in
IEA
TreeGrafter Ensembl UniProt
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936579:734,151...763,672
Ensembl chrNW_004936579:734,109...766,748
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Zfyve16
zinc finger FYVE-type containing 16
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936549:8,082,464...8,110,116
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Zfyve28
zinc finger FYVE-type containing 28
located_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936477:21,103,336...21,225,497
Ensembl chrNW_004936477:21,103,323...21,224,468
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Zfyve9
zinc finger FYVE-type containing 9
located_in
IEA
TreeGrafter UniProt Ensembl
GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936522:8,632,626...8,808,008
Ensembl chrNW_004936522:8,633,043...8,808,008
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Gripap1
GRIP1 associated protein 1
is_active_in located_in
ISO IEA
PMID:20098723
SynGO TreeGrafter
PMID:20098723
GO_REF:0000118 RGD:12050105
NCBI chrNW_004936721:892,704...916,965
Ensembl chrNW_004936721:891,824...916,984
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Eea1
early endosome antigen 1
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936507:9,331,572...9,465,708
Ensembl chrNW_004936507:9,331,455...9,424,835
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Pick1
protein interacting with PRKCA 1
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526
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Snx27
sorting nexin 27
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936580:1,815,582...1,893,076
Ensembl chrNW_004936580:1,815,651...1,893,753
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Snx6
sorting nexin 6
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936494:8,819,695...8,880,298
Ensembl chrNW_004936494:8,821,147...8,879,446
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Vps26b
VPS26, retromer complex component B
is_active_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936684:1,597,706...1,617,689
Ensembl chrNW_004936684:1,599,754...1,617,662
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all